BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146552.4 + phase: 0
(340 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP043175 38 0.003
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 37 0.006
TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-... 36 0.008
BP078507 36 0.008
TC17983 similar to UP|Q9XEX5 (Q9XEX5) Cytidine deaminase , part... 35 0.014
TC16697 35 0.014
TC8273 UP|BAD11134 (BAD11134) Glutamate-rich protein, complete 35 0.024
TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein ... 34 0.031
BP033767 34 0.031
TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ki... 34 0.031
TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, ... 34 0.031
BP032533 34 0.031
TC19378 weakly similar to UP|O80967 (O80967) At2g39140 protein, ... 34 0.031
TC9682 similar to UP|Q8VZC0 (Q8VZC0) DTDP-glucose 4-6-dehydratas... 34 0.040
TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenyla... 33 0.069
TC8309 UP|O22306 (O22306) Nlj21, complete 33 0.069
TC9577 weakly similar to UP|ATPD_PEA (Q02758) ATP synthase delta... 33 0.069
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 33 0.069
BP038767 32 0.12
TC9115 similar to PIR|T00425|T00425 photolyase/blue-light recept... 32 0.12
>BP043175
Length = 548
Score = 37.7 bits (86), Expect = 0.003
Identities = 39/163 (23%), Positives = 65/163 (38%), Gaps = 3/163 (1%)
Frame = +2
Query: 47 PDNPEPVSVQQPQPNPEPTTNSPHNSTTQ-KASEVASDATTSETPQHQEYSTLHNLEKH- 104
P N +PV + P N P+ NS T Q +E A + SETP + L +
Sbjct: 101 PHNNQPVDSEAPLDN--PSVNSEALPTDQLDRTEAAHEKPASETPPSNQQDNAEALPNNV 274
Query: 105 -LGGEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSD 163
+ E+Q T + V ETQ + + + E AS+ V+ Q +++ +
Sbjct: 275 VVNSELQ--------TGNDVVVSETQQGNEVV----LSETQASDTVSETQPSNEIAMSDS 418
Query: 164 QTTEQQQQPDSPTIIDLTSDQPSISNTTQTEPSPIPDHILESE 206
Q + D+ D+ + N T + I + +L SE
Sbjct: 419 QPNAEVVMSDAHLSSDIVMSETHPCNETAMHEAQISNDVLMSE 547
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 36.6 bits (83), Expect = 0.006
Identities = 38/155 (24%), Positives = 52/155 (33%), Gaps = 16/155 (10%)
Frame = +1
Query: 38 NLPPTHPLYPDNP----EPVSVQQPQPNPEPTTNSPHNSTTQKASEVASD--------AT 85
N PP P+ P P P +V P P P + P+ T K S T
Sbjct: 61 NQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKT 240
Query: 86 TSETPQHQEYSTLHNLEKHLGGEMQP--TPTKASKTVPEKTVLETQTETQTIPEQTVQEQ 143
S Q T + + QP TPT P T T T +
Sbjct: 241 PSPISQPPHVPTPPSTPSPIS---QPPYTPTPPKTPSPTSQPPHTPTPPNTPSPISQPPY 411
Query: 144 TASEQVAPDQTTSDQHIPS--DQTTEQQQQPDSPT 176
T + P T HIPS + ++ Q P++P+
Sbjct: 412 TPTPPKTPSPTNQPPHIPSPPNSSSPTSQPPNTPS 516
Score = 35.0 bits (79), Expect = 0.018
Identities = 31/127 (24%), Positives = 42/127 (32%), Gaps = 4/127 (3%)
Frame = +1
Query: 40 PPTHPLYPDNPEPVS----VQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEY 95
PP PL P P P+S V P P P + P+ T K S + TP +
Sbjct: 211 PPYIPLPPKTPSPISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPN--- 381
Query: 96 STLHNLEKHLGGEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTT 155
TP+ S+ T +T + T P ++S P T
Sbjct: 382 ----------------TPSPISQPPYTPTPPKTPSPTNQPPHIPSPPNSSSPTSQPPNTP 513
Query: 156 SDQHIPS 162
S PS
Sbjct: 514 SPPKTPS 534
Score = 30.8 bits (68), Expect = 0.34
Identities = 33/155 (21%), Positives = 45/155 (28%), Gaps = 4/155 (2%)
Frame = +1
Query: 52 PVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLHNLEKHLGGEMQP 111
P S+ P P P PH K + +P H P
Sbjct: 19 PPSIPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNH-------PPYTP 177
Query: 112 TPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSDQTTEQQQQ 171
TP K + + +T + Q T +P P + Q
Sbjct: 178 TPPKTPSPTSQPPYIPLPPKTPSPISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQP 357
Query: 172 PDSPTIIDLTS--DQPSISNTTQTEPSPI--PDHI 202
P +PT + S QP + T PSP P HI
Sbjct: 358 PHTPTPPNTPSPISQPPYTPTPPKTPSPTNQPPHI 462
>TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-like
protein, partial (41%)
Length = 522
Score = 36.2 bits (82), Expect = 0.008
Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 7/160 (4%)
Frame = +2
Query: 41 PTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLHN 100
P PL+ +P S PN +T S STT K S + ++T P S+ +
Sbjct: 50 PNKPLHSTLTKPPSQISSNPNKTTSTTSSPTSTTPKPSPSPAPSSTLRAPS----SSPAS 217
Query: 101 LEKHLGGEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSD--- 157
P P+ S + P + T + + T ++S AP + S
Sbjct: 218 ASPASSPTKSPKPSSPSASAPPSSTPLTPSTATSESSPTATSSSSSASPAPPTSFSALSR 397
Query: 158 ----QHIPSDQTTEQQQQPDSPTIIDLTSDQPSISNTTQT 193
+ + S + P P+ I +++ S S+ T
Sbjct: 398 ALELKALASSPSPPSSPPPSPPSAICMSTSLSSASSVRST 517
>BP078507
Length = 414
Score = 36.2 bits (82), Expect = 0.008
Identities = 27/88 (30%), Positives = 39/88 (43%), Gaps = 3/88 (3%)
Frame = -1
Query: 117 SKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSDQTT---EQQQQPD 173
++ P + T+ Q+ PE + S Q +P+ TS PS Q QP
Sbjct: 357 TQDTPSSHT*SSPTDKQSSPE-SYPTPLHSPQPSPNAPTSPYPAPSSQLRPPPSTSHQPP 181
Query: 174 SPTIIDLTSDQPSISNTTQTEPSPIPDH 201
PT++ TSD PS S + P+P P H
Sbjct: 180 -PTLLQPTSDTPSPSPPPPSSPNPPPPH 100
>TC17983 similar to UP|Q9XEX5 (Q9XEX5) Cytidine deaminase , partial (42%)
Length = 519
Score = 35.4 bits (80), Expect = 0.014
Identities = 25/115 (21%), Positives = 40/115 (34%)
Frame = +2
Query: 47 PDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLHNLEKHLG 106
PD+P P S P +P +S +++ AS + +T S + ST +
Sbjct: 140 PDHPSPTSGSPPSDSPHRVGSSSESTSNSLASPSTTPSTPSSSSSPTSPSTTKQISTPSP 319
Query: 107 GEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIP 161
P T AS + ++ + P + S TTS H P
Sbjct: 320 SPPPPVATAASSSKNSAEPRRFKSSSPQNPTRNSHPYRISSHTDSPPTTSSLHAP 484
Score = 27.7 bits (60), Expect = 2.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 41 PTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSE 88
P H +PD P P +Q + NP PTT+ ++ + SD S+
Sbjct: 75 PIHGSHPD-PTPPKPRQRRKNPRPTTHLQLPGRRRRTLLIGSDLHRSQ 215
>TC16697
Length = 635
Score = 35.4 bits (80), Expect = 0.014
Identities = 19/52 (36%), Positives = 24/52 (45%)
Frame = -1
Query: 40 PPTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQ 91
PP HP P +P P + Q + P P T P NS+ +S TS PQ
Sbjct: 572 PPNHPPPPSSPSPPAPSQRK--PAPATAPPSNSSQSPPPNPSSTDPTSPAPQ 423
Score = 27.3 bits (59), Expect = 3.8
Identities = 11/29 (37%), Positives = 15/29 (50%)
Frame = -1
Query: 47 PDNPEPVSVQQPQPNPEPTTNSPHNSTTQ 75
P NP P P P P+ SP +S++Q
Sbjct: 467 PPNPSSTDPTSPAPQPHPSHLSPASSSSQ 381
>TC8273 UP|BAD11134 (BAD11134) Glutamate-rich protein, complete
Length = 923
Score = 34.7 bits (78), Expect = 0.024
Identities = 27/101 (26%), Positives = 49/101 (47%), Gaps = 4/101 (3%)
Frame = +1
Query: 131 ETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSDQTTEQQQQPDSPTIIDLTSDQPSISNT 190
+ +T E T+ EQ ASE AP+ T +H P ++TTE +P + + T++ P+ T
Sbjct: 124 QIETFQETTI-EQPASEVPAPEPTIEQEH-PKEETTE---EPKVEAVAETTTEAPAAPET 288
Query: 191 ---TQTEPSPIPDHIL-ESEYIEEQLIRLSDEIQALILRRT 227
+ E + + E+E EE ++ + + I+ T
Sbjct: 289 EAPAEVETKEVTEETKPEAEKTEEPEVKPEEVKEEPIVEET 411
>TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein DDTFR10/A
(Fragment), partial (44%)
Length = 1109
Score = 34.3 bits (77), Expect = 0.031
Identities = 21/78 (26%), Positives = 35/78 (43%)
Frame = +2
Query: 94 EYSTLHNLEKHLGGEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQ 153
E S L ++ HL GE+ P PT + P + + Q Q E T + ++ + D
Sbjct: 119 EISALKQIKLHLLGELSPLPTPKNNQQPPQQ--QQQPWFQQFDEITTSNTSPTQSSSSDS 292
Query: 154 TTSDQHIPSDQTTEQQQQ 171
++S +I D + Q Q
Sbjct: 293 SSSSSNISLDHYFDTQNQ 346
>BP033767
Length = 541
Score = 34.3 bits (77), Expect = 0.031
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 29 NRIKLCEKFNLPPTHPLYPDNPEPVSVQQPQPNPE-PTTNSPHNSTTQKAS 78
NR L + F P P NP P S PNP+ P +++P +TTQ AS
Sbjct: 132 NRRILHQPFTQGSLPPSQPPNPPPPSPSPSPPNPKYPFSSTPTTTTTQNAS 284
Score = 32.7 bits (73), Expect = 0.090
Identities = 17/45 (37%), Positives = 23/45 (50%), Gaps = 5/45 (11%)
Frame = +1
Query: 40 PPTHPLYPDNPEP-----VSVQQPQPNPEPTTNSPHNSTTQKASE 79
PP+ L P NP P S P P P P++ SP +ST A++
Sbjct: 364 PPSSSLKPPNPNPPTSSSASPLPPSPAPSPSSLSPPSSTADAAAK 498
Score = 30.4 bits (67), Expect = 0.45
Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 8/65 (12%)
Frame = +1
Query: 40 PPTHPLYPDNPEPVSVQQPQPNPE--------PTTNSPHNSTTQKASEVASDATTSETPQ 91
PP+ P P +P S++ P PNP P + +P S+ S A DA TP
Sbjct: 334 PPSPPSPPTSPPSSSLKPPNPNPPTSSSASPLPPSPAPSPSSLSPPSSTA-DAAAKTTPP 510
Query: 92 HQEYS 96
+ S
Sbjct: 511 TRRLS 525
>TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(15%)
Length = 606
Score = 34.3 bits (77), Expect = 0.031
Identities = 33/127 (25%), Positives = 44/127 (33%), Gaps = 2/127 (1%)
Frame = -3
Query: 40 PPTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLH 99
PP P P P P S P P P ++P ++ +S AS +P
Sbjct: 328 PPPPPAPPQIPPPSSPPSPSSPPSPPASAP*TPSSP*SSNSASSPPPQASPP-------- 173
Query: 100 NLEKHLGGEMQPTPTKASKT-VPEKTVLETQTETQTIPEQTVQEQT-ASEQVAPDQTTSD 157
PTPT + T + +T + QT T QT + P Q
Sbjct: 172 ----------PPTPTVSR*TSTATSSSSQTNSSDQTRATATRLSQTRCTTDAPPPQNHHH 23
Query: 158 QHIPSDQ 164
QH SDQ
Sbjct: 22 QHHSSDQ 2
>TC10830 weakly similar to UP|Q94JL9 (Q94JL9) At1g68400/T2E12_5, partial
(24%)
Length = 702
Score = 34.3 bits (77), Expect = 0.031
Identities = 40/145 (27%), Positives = 54/145 (36%), Gaps = 8/145 (5%)
Frame = +3
Query: 59 QPNPEPTTNSPHNS--------TTQKASEVASDATTSETPQHQEYSTLHNLEKHLGGEMQ 110
+P P P TNSPH + T ASE AS A++S+ ST
Sbjct: 231 KPLPTPPTNSPHGTPPPTSAPGTASPASETASPASSSKISTSTAPST------------- 371
Query: 111 PTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSDQTTEQQQ 170
P P S ++T T P QT A + + TTS PS +
Sbjct: 372 P*PPSLSSVSS-----ASKTTASTAPYQTSPTSPA*DSSSSPTTTSPVTSPS-------R 515
Query: 171 QPDSPTIIDLTSDQPSISNTTQTEP 195
P SP LTS P+ ++ + P
Sbjct: 516 SPPSPASTALTS--PTTASPARFRP 584
>BP032533
Length = 441
Score = 34.3 bits (77), Expect = 0.031
Identities = 21/72 (29%), Positives = 36/72 (49%)
Frame = +3
Query: 50 PEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLHNLEKHLGGEM 109
P V+V +PNP T+S ++T+ S + +++ +P H + T H L H
Sbjct: 105 PVAVAVAIAEPNPLLRTSSNSSATSASHSSSSPFSSSPSSPSHTNHRT-HGLNLH---RH 272
Query: 110 QPTPTKASKTVP 121
PT ++ KT+P
Sbjct: 273 SPTSSQKQKTLP 308
>TC19378 weakly similar to UP|O80967 (O80967) At2g39140 protein, partial
(17%)
Length = 466
Score = 34.3 bits (77), Expect = 0.031
Identities = 22/64 (34%), Positives = 27/64 (41%), Gaps = 5/64 (7%)
Frame = +1
Query: 39 LPP---THPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTT--QKASEVASDATTSETPQHQ 93
LPP T P P NP P P PNP P T +P + S A T+S P +
Sbjct: 148 LPPQSSTSPSLPPNPNPNPNPNPNPNPNPITTTPPTPASF*SHGSSGARTETSSCNPNLR 327
Query: 94 EYST 97
S+
Sbjct: 328 RVSS 339
>TC9682 similar to UP|Q8VZC0 (Q8VZC0) DTDP-glucose 4-6-dehydratase-like
protein, partial (29%)
Length = 731
Score = 33.9 bits (76), Expect = 0.040
Identities = 29/123 (23%), Positives = 47/123 (37%)
Frame = +1
Query: 40 PPTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLH 99
P H P+ P P P+P+P+T S NS + +S +S A P + L
Sbjct: 247 PKLHHTPPNPPNT-----PDPSPDPSTTSSVNSVSSSSSSESSSA-----PPSSSSNPLS 396
Query: 100 NLEKHLGGEMQPTPTKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQH 159
+ PTP S +P +T QT + P ++ + A A ++
Sbjct: 397 PASALTTPHLTPTP---SSPLPSQTSTPPQTASAVSPPESAGDGYALSSPAEQASSGATS 567
Query: 160 IPS 162
+ S
Sbjct: 568 LTS 576
>TC8393 weakly similar to GB|AAM61124.1|21536792|AY084557 prenylated Rab
receptor 2 {Arabidopsis thaliana;}, partial (78%)
Length = 1012
Score = 33.1 bits (74), Expect = 0.069
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Frame = +1
Query: 40 PPTHPLYPD-----NPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQE 94
PP HP P +P P + P P P P ++P ++T+ S AS S P
Sbjct: 61 PPRHPSSPSPTPLRHPPPSHLPDPTPLPPPPPSAPSSTTSPNPSATAS---LSAVPGRSL 231
Query: 95 YSTLHNLEKHLGGEMQP------TPTKASKTVP 121
H+ ++ M P +PT AS T P
Sbjct: 232 PIAPHSPNRN-PSPMPPSASARISPTSASTTTP 327
>TC8309 UP|O22306 (O22306) Nlj21, complete
Length = 1063
Score = 33.1 bits (74), Expect = 0.069
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Frame = +3
Query: 53 VSVQQPQPNPEPTTNSPHNSTTQKASE-------VASDATTSETPQHQEYSTLHN---LE 102
V Q P+P P +S +ASE + +A T+E + T+ + +E
Sbjct: 285 VETQTPEPEPVSEKTKEEDSAVTEASEPEPTEDNPSIEAETTEVVEEVVTVTVTDEPKVE 464
Query: 103 KHLGGEMQPTPTKASKTVPEKTVLETQT-------ETQTI------PEQTVQEQTASEQV 149
+ GE + T+ +T +E Q ET T+ E+ V E A E+V
Sbjct: 465 EKTDGEAKKEATETKETKESADPVEVQAPEAGEEPETVTLKEDASKEEEKVAEPEAKEEV 644
Query: 150 ----APDQTTSDQHIPSDQTTEQQQQPD 173
APD+ ++ + ++ + E++++ +
Sbjct: 645 VNTEAPDEKKEEEKLDTEGSDEKKEEEE 728
Score = 32.0 bits (71), Expect = 0.15
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 114 TKASKTVPEKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIPSDQTTEQQQQPD 173
TKAS E+ E ETQT + V E+T E A + + + + + E +
Sbjct: 237 TKASLKDHEEKTTEQVVETQTPEPEPVSEKTKEEDSAVTEASEPEPTEDNPSIEAETTEV 416
Query: 174 SPTIIDLT-SDQPSISNTTQTE 194
++ +T +D+P + T E
Sbjct: 417 VEEVVTVTVTDEPKVEEKTDGE 482
>TC9577 weakly similar to UP|ATPD_PEA (Q02758) ATP synthase delta chain,
chloroplast precursor , partial (54%)
Length = 627
Score = 33.1 bits (74), Expect = 0.069
Identities = 30/141 (21%), Positives = 51/141 (35%), Gaps = 6/141 (4%)
Frame = +3
Query: 40 PPTHPLYPDNPEPVSVQQPQPNPEPTTNSPHNSTTQKASEVASDATTSETPQHQEYSTLH 99
PP P NP S + P+P T+N + + A+ A+ + TP + H
Sbjct: 117 PPPETSSPRNPSSTSPSRAPPSPHSTSNL--SQSPPPAAPAAAHSEPE*TPPPPPATPPH 290
Query: 100 NLEKHLGGEMQPTPTKASKTVP------EKTVLETQTETQTIPEQTVQEQTASEQVAPDQ 153
+ P PT S P ++ L + T + + + + +AS +
Sbjct: 291 S-------PTSPAPTNPSTPPPPTWRSSRRSFLTPRCSTISPTQPSASKTSASSSTTLPR 449
Query: 154 TTSDQHIPSDQTTEQQQQPDS 174
S HIP +T + S
Sbjct: 450 ARSFSHIPGTSSTSSSTRRGS 512
Score = 30.8 bits (68), Expect = 0.34
Identities = 27/118 (22%), Positives = 44/118 (36%), Gaps = 10/118 (8%)
Frame = +3
Query: 59 QPNPEPTTNSPHNSTTQKASEVA----SDATTSETPQHQEYSTLHNLEKHLGGEMQPTPT 114
+P+P P T+SP N ++ S S + S++P + H+ E + TP
Sbjct: 108 KPSPPPETSSPRNPSSTSPSRAPPSPHSTSNLSQSPPPAAPAAAHS-------EPE*TPP 266
Query: 115 KASKTVPEKTVLETQTETQTIPEQTVQEQTAS------EQVAPDQTTSDQHIPSDQTT 166
T P T T P T + S ++P Q ++ + S TT
Sbjct: 267 PPPATPPHSPTSPAPTNPSTPPPPTWRSSRRSFLTPRCSTISPTQPSASKTSASSSTT 440
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 33.1 bits (74), Expect = 0.069
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Frame = +3
Query: 41 PTHPLYPDNPEPVSVQQPQPNPEP-------TTNSPHNSTTQKASEVASDATTSETPQHQ 93
P HP P NP P + P PNP P ++P+ T + T + P Q
Sbjct: 141 PPHP--PQNPNPTPIPAPNPNPNPIQIQNPNPIHNPNPRPTPTPPQPRPPPTFNRAPPPQ 314
Query: 94 EYSTLH-NLEKHLGGEMQPTPTKAS 117
+ H + L P+P+ AS
Sbjct: 315 QQQPSHFSHFSSLPPSSAPSPSPAS 389
Score = 28.5 bits (62), Expect = 1.7
Identities = 13/34 (38%), Positives = 15/34 (43%), Gaps = 4/34 (11%)
Frame = +3
Query: 40 PPTHPLYPDNPEPVSVQQP----QPNPEPTTNSP 69
P P NP P+ +Q P PNP PT P
Sbjct: 168 PTPIPAPNPNPNPIQIQNPNPIHNPNPRPTPTPP 269
>BP038767
Length = 561
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/86 (25%), Positives = 38/86 (43%), Gaps = 8/86 (9%)
Frame = +2
Query: 110 QPTPTKASKTVP--------EKTVLETQTETQTIPEQTVQEQTASEQVAPDQTTSDQHIP 161
Q P S T+P T+ +TQT T+ +T S P + S P
Sbjct: 182 QSNPLSLSSTMPGLVKTPPLRITMPQTQTPTRRSEPAATNNKTPSPSPLPKKPPSPS--P 355
Query: 162 SDQTTEQQQQPDSPTIIDLTSDQPSI 187
S +++ +++ P++PT D + D P +
Sbjct: 356 STRSSAKKKTPETPTNPDASLDNPDL 433
>TC9115 similar to PIR|T00425|T00425 photolyase/blue-light receptor (PHR2)
[imported] - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (55%)
Length = 1018
Score = 32.3 bits (72), Expect = 0.12
Identities = 15/31 (48%), Positives = 19/31 (60%), Gaps = 1/31 (3%)
Frame = +1
Query: 40 PPTHPLYPDNPEPV-SVQQPQPNPEPTTNSP 69
P +H L P N P S QP+P P PT++SP
Sbjct: 205 PNSHHLLPHNNNPTRSKSQPKPPPSPTSHSP 297
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.308 0.126 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,367,948
Number of Sequences: 28460
Number of extensions: 89731
Number of successful extensions: 1570
Number of sequences better than 10.0: 226
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of query: 340
length of database: 4,897,600
effective HSP length: 91
effective length of query: 249
effective length of database: 2,307,740
effective search space: 574627260
effective search space used: 574627260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC146552.4