Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146551.12 + phase: 0 /pseudo
         (447 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP044361                                                              100  4e-22
TC14927 weakly similar to GB|BAC16200.1|22831356|AP005486 transp...    74  5e-14
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (...    40  8e-04
AV427438                                                               40  0.001
TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 gluc...    39  0.001
AV773558                                                               39  0.002
AW164001                                                               39  0.002
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr...    38  0.003
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar...    37  0.007
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)           37  0.007
TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%)       37  0.009
BI419972                                                               36  0.011
TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associ...    35  0.019
AV410371                                                               35  0.019
CB826779                                                               35  0.033
TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Ara...    34  0.043
TC8507 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetyla...    33  0.073
BI417786                                                               33  0.073
TC8119 similar to UP|Q9FFF5 (Q9FFF5) Nucleic acid binding protei...    33  0.073
BP073359                                                               33  0.073

>BP044361 
          Length = 542

 Score =  100 bits (250), Expect = 4e-22
 Identities = 63/205 (30%), Positives = 96/205 (46%)
 Frame = +1

Query: 76  DYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQN 135
           +++ + LNG  + FR++ RM   VF KLC I+R++T L DT  + IEE LA FL I+G N
Sbjct: 82  EFMAEVLNGHDDFFREMLRMDKHVFHKLCDILRQRTLLRDTPGVMIEEQLAIFLNIIGHN 261

Query: 136 TRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKIL 195
            R  +I+  F  S    S +F+ +LKA+ S++ +++  P  + P +I  S R+YPYFK  
Sbjct: 262 ERNRVIQERFQHSGETISRHFNNVLKAVKSLSREVLQPPQPTTPPEILNSARYYPYFK-- 435

Query: 196 YN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTH 255
                                                               +  IDG  
Sbjct: 436 --------------------------------------------------DCIGVIDGMQ 465

Query: 256 IPALVRGRDVSSYRDRHGRISQNVL 280
           IPA V  +D S +R++ G ++QNVL
Sbjct: 466 IPAHVPAKDHSRFRNKKGILAQNVL 540


>TC14927 weakly similar to GB|BAC16200.1|22831356|AP005486 transposase-like
           {Oryza sativa (japonica cultivar-group);} , partial
           (11%)
          Length = 539

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +3

Query: 264 DVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALKRKNGLKVPHG 321
           D   YR+R G IS NVL  C  DL+F+YVL GWEGSA DS++L DAL+R+N L++P+G
Sbjct: 6   DKPRYRNRKGDISTNVLGVCGPDLKFIYVLPGWEGSAGDSRVLRDALRRQNHLQIPNG 179


>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
           protein) (Fragment), partial (15%)
          Length = 543

 Score = 40.0 bits (92), Expect = 8e-04
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           E+ D E  DDDDDD+DDDD ++EE D++
Sbjct: 273 EEEDDEDEDDDDDDDDDDDGEEEEDDDD 356



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 16/28 (57%), Positives = 21/28 (74%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           ED D E  D+D+DD+DDDD DD+  +EE
Sbjct: 261 EDDDEEEDDEDEDDDDDDDDDDDGEEEE 344



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           E+ D E  DD+D+D+DDDD DD++ +EE
Sbjct: 258 EEDDDEEEDDEDEDDDDDDDDDDDGEEE 341



 Score = 36.2 bits (82), Expect = 0.011
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +D + E  +D+DDD+DDDD DD E +E+
Sbjct: 264 DDDEEEDDEDEDDDDDDDDDDDGEEEED 347



 Score = 35.8 bits (81), Expect = 0.015
 Identities = 19/35 (54%), Positives = 21/35 (59%), Gaps = 4/35 (11%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDD----EDDDDTDDEETDEELYE 33
           ED D +  DDDDDD    EDDDD D+EE   E  E
Sbjct: 288 EDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVE 392



 Score = 35.8 bits (81), Expect = 0.015
 Identities = 13/28 (46%), Positives = 21/28 (74%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           E+ D +  DDDDDD+DDD  ++E+ D++
Sbjct: 276 EEDDEDEDDDDDDDDDDDGEEEEDDDDD 359



 Score = 35.4 bits (80), Expect = 0.019
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 6   DTEAIDDDDDDEDDDDTDDEETDEE 30
           D E  +DDD++EDD+D DD++ D++
Sbjct: 246 DNEEEEDDDEEEDDEDEDDDDDDDD 320



 Score = 35.4 bits (80), Expect = 0.019
 Identities = 13/28 (46%), Positives = 21/28 (74%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +D + +  D+DDDD+DDDD D EE +++
Sbjct: 267 DDEEEDDEDEDDDDDDDDDDDGEEEEDD 350



 Score = 35.4 bits (80), Expect = 0.019
 Identities = 13/28 (46%), Positives = 21/28 (74%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           E+ D +  +DD+D++DDDD DD++  EE
Sbjct: 255 EEEDDDEEEDDEDEDDDDDDDDDDDGEE 338



 Score = 35.4 bits (80), Expect = 0.019
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDD--DDTDDEETDEE 30
           ED + E  DDDDDD+DD  ++ DD++ DEE
Sbjct: 279 EDDEDEDDDDDDDDDDDGEEEEDDDDDDEE 368



 Score = 35.0 bits (79), Expect = 0.025
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +3

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +E+ + +  ++DD+DEDDDD DD++ D E
Sbjct: 249 NEEEEDDDEEEDDEDEDDDDDDDDDDDGE 335



 Score = 33.5 bits (75), Expect = 0.073
 Identities = 11/29 (37%), Positives = 23/29 (78%)
 Frame = +3

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +++ + E  D+++DDED+DD DD++ D++
Sbjct: 243 TDNEEEEDDDEEEDDEDEDDDDDDDDDDD 329



 Score = 31.6 bits (70), Expect = 0.28
 Identities = 9/26 (34%), Positives = 21/26 (80%)
 Frame = +3

Query: 5   IDTEAIDDDDDDEDDDDTDDEETDEE 30
           + T+  +++DDDE++DD D+++ D++
Sbjct: 237 VQTDNEEEEDDDEEEDDEDEDDDDDD 314



 Score = 27.7 bits (60), Expect = 4.0
 Identities = 10/26 (38%), Positives = 18/26 (68%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETD 28
           +D   E  DDDDDDE+++ +++ E +
Sbjct: 321 DDDGEEEEDDDDDDEEEEGSEEVEVE 398



 Score = 27.3 bits (59), Expect = 5.2
 Identities = 10/28 (35%), Positives = 18/28 (63%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +D D    ++DDDD+D+++   EE + E
Sbjct: 315 DDDDDGEEEEDDDDDDEEEEGSEEVEVE 398


>AV427438 
          Length = 182

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 58  GEHVERPLTRRRITSKGYDYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIR 108
           G H+ + L+R  + S G  ++ + LNG +E+  + +RM  DVF KLC I++
Sbjct: 35  GSHIPKELSR--LASTGLKFVDEVLNGQNELCLENFRMDKDVFYKLCDILQ 181


>TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 glucosidase
           SCW10 precursor  (Soluble cell wall protein 10) ,
           partial (6%)
          Length = 1209

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +D D +  DDDDDD+DDDD DD++ D++
Sbjct: 83  DDDDDDDDDDDDDDDDDDDDDDDDGDKK 166



 Score = 38.1 bits (87), Expect = 0.003
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEELYEAIYMYMMAIHALMHVVNQF 52
           +D D +  DDDDDD+DDDD D ++ D +   A+   ++A   L+  V  F
Sbjct: 98  DDDDDDDDDDDDDDDDDDDGDKKQPDSDTGTALKGTLLAGVLLLGFVGGF 247


>AV773558 
          Length = 469

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 4/32 (12%)
 Frame = -2

Query: 3   EDIDTEAI----DDDDDDEDDDDTDDEETDEE 30
           E++D + +    +DDDDD+DDDD DD+ TD+E
Sbjct: 402 EELDDDFVLVYSEDDDDDDDDDDDDDDYTDDE 307



 Score = 37.7 bits (86), Expect = 0.004
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -2

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           SED D    DDDDDD+DDDD  D+E +EE
Sbjct: 369 SEDDD----DDDDDDDDDDDYTDDEDEEE 295



 Score = 27.7 bits (60), Expect = 4.0
 Identities = 13/28 (46%), Positives = 18/28 (63%), Gaps = 3/28 (10%)
 Frame = -2

Query: 8   EAIDDDDD---DEDDDDTDDEETDEELY 32
           E +DDD      EDDDD DD++ D++ Y
Sbjct: 402 EELDDDFVLVYSEDDDDDDDDDDDDDDY 319


>AW164001 
          Length = 447

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +1

Query: 3  EDIDTEAIDDDDDDEDDDDTDDEET 27
          ED+D +  DDDDDD+DDDD D+  T
Sbjct: 70 EDVDEDFDDDDDDDDDDDDDDEPAT 144



 Score = 35.4 bits (80), Expect = 0.019
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +1

Query: 8  EAIDDDDDDEDDDDTDDEETDE 29
          E +D+D DD+DDDD DD++ DE
Sbjct: 70 EDVDEDFDDDDDDDDDDDDDDE 135



 Score = 32.0 bits (71), Expect = 0.21
 Identities = 12/28 (42%), Positives = 20/28 (70%)
 Frame = +1

Query: 3  EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
          +++  E   D+D D+DDDD DD++ D+E
Sbjct: 52 DEVYKEEDVDEDFDDDDDDDDDDDDDDE 135



 Score = 30.0 bits (66), Expect = 0.81
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 1  MSEDIDTEAIDDDDDDEDDD 20
          + ED D +  DDDDDD+DD+
Sbjct: 76 VDEDFDDDDDDDDDDDDDDE 135



 Score = 29.6 bits (65), Expect = 1.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 6  DTEAIDDDDDDEDDDDTDDEETDEE 30
          D E   ++D DED DD DD++ D++
Sbjct: 49 DDEVYKEEDVDEDFDDDDDDDDDDD 123


>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
           1-like protein 3, partial (81%)
          Length = 1298

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +2

Query: 6   DTEAIDDDDDDEDDDDTDDEETDEE 30
           + E  DDDDD+E++DD DD+E DEE
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDDEE 871



 Score = 37.7 bits (86), Expect = 0.004
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           ED D +  +DDDDDE+++D DD++ D+E
Sbjct: 785 EDGDEDEDEDDDDDEEEEDDDDDDEDDE 868



 Score = 36.6 bits (83), Expect = 0.009
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +2

Query: 4   DIDTEAIDDDDDDEDDDDTDDEETDE 29
           D D +  DDDD++E+DDD DDE+ +E
Sbjct: 794 DEDEDEDDDDDEEEEDDDDDDEDDEE 871



 Score = 36.2 bits (82), Expect = 0.011
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           EDI+ +  D D+D+++DDD D+EE D++
Sbjct: 764 EDIEEDDEDGDEDEDEDDDDDEEEEDDD 847



 Score = 35.0 bits (79), Expect = 0.025
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +E  D E I++DD+D D+D+ +D++ DEE
Sbjct: 746 AEQSDFEDIEEDDEDGDEDEDEDDDDDEE 832



 Score = 33.9 bits (76), Expect = 0.056
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +D D +  +D+DDD+D+++ DD++ DE+
Sbjct: 779 DDEDGDEDEDEDDDDDEEEEDDDDDDED 862



 Score = 32.7 bits (73), Expect = 0.12
 Identities = 12/27 (44%), Positives = 20/27 (73%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDE 29
           ED D +  DD+++++DDDD +D+E  E
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDDEEGE 877



 Score = 26.6 bits (57), Expect = 8.9
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 6   DTEAIDDDDDDEDDDDTDDEETDEE 30
           + E  D +D +EDD+D D++E +++
Sbjct: 743 EAEQSDFEDIEEDDEDGDEDEDEDD 817


>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
           thaliana;}, partial (44%)
          Length = 700

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 11  DDDDDDEDDDDTDDEETDEELYEAIYMYMMAIHA 44
           D DDDD+DDDD D+EE +EE     Y+    + A
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTEYLVRRTVAA 271



 Score = 34.7 bits (78), Expect = 0.033
 Identities = 17/35 (48%), Positives = 21/35 (59%), Gaps = 7/35 (20%)
 Frame = +2

Query: 3  EDIDTEAIDDDDDDEDDDDT-------DDEETDEE 30
          ED D +  DDD D++DDDD        DDEE +EE
Sbjct: 29 EDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEE 133



 Score = 30.4 bits (67), Expect = 0.62
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 11 DDDDDDEDDDDTDDEETDEE 30
          D+DDDD+ +DD  DE+ D++
Sbjct: 26 DEDDDDDGEDDDGDEDDDDD 85



 Score = 30.0 bits (66), Expect = 0.81
 Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 5/35 (14%)
 Frame = +2

Query: 1  MSEDIDTEAIDDDDDDEDDDDTD-----DEETDEE 30
          MS D D +   +DDD ++DDD D     D++ DEE
Sbjct: 17 MSGDEDDDDDGEDDDGDEDDDDDAPGGGDDDDDEE 121



 Score = 29.3 bits (64), Expect = 1.4
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 6   DTEAIDDDDDDEDDDDTDDEETDEE 30
           D +  DDDDDD+D+++ ++E+   E
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTE 244



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 4   DIDTEAIDDDDDDEDDDDTDDEETD 28
           D D +  DDDDDDE++++ +D  T+
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTE 244



 Score = 28.5 bits (62), Expect = 2.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 7  TEAIDDDDDDEDDDDTDDEETDEE 30
          T    D+DDD+D +D D +E D++
Sbjct: 11 TRMSGDEDDDDDGEDDDGDEDDDD 82


>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
          Length = 1008

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -2

Query: 3   EDIDTE-AIDDDDDDEDDDDTDDEETDEE 30
           ED D E   DDDDDDEDDD+ DD   DEE
Sbjct: 422 EDEDGEDQEDDDDDDEDDDEEDDGGEDEE 336



 Score = 34.7 bits (78), Expect = 0.033
 Identities = 14/26 (53%), Positives = 19/26 (72%)
 Frame = -2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETD 28
           ED + E  +D +DD+DDD+ DDEE D
Sbjct: 431 EDEEDEDGEDQEDDDDDDEDDDEEDD 354



 Score = 34.3 bits (77), Expect = 0.043
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 13/46 (28%)
 Frame = -2

Query: 3   EDIDTEAIDDDDDDEDDD-------------DTDDEETDEELYEAI 35
           ED + +  DD+DDDE+DD             D +DEE DEE  EA+
Sbjct: 407 EDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEAL 270



 Score = 30.0 bits (66), Expect = 0.81
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = -2

Query: 11  DDDDDDED--DDDTDDEETDEE 30
           ++D+D ED  DDD DDE+ DEE
Sbjct: 425 EEDEDGEDQEDDDDDDEDDDEE 360


>TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%)
          Length = 517

 Score = 36.6 bits (83), Expect = 0.009
 Identities = 14/30 (46%), Positives = 22/30 (72%)
 Frame = +1

Query: 1   MSEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           +S+   ++  DDDDD ED+DD D+E+ D+E
Sbjct: 109 LSDGSSSDDDDDDDDSEDEDDDDNEDDDDE 198


>BI419972 
          Length = 498

 Score = 36.2 bits (82), Expect = 0.011
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +1

Query: 6   DTEAIDDDDDDEDDDDTDDEETDE 29
           D+E  DD+D D++DDD DD++ DE
Sbjct: 343 DSETEDDEDGDDEDDDADDDDDDE 414



 Score = 33.1 bits (74), Expect = 0.095
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEE 26
           SE  D E  DD+DDD DDDD D+ E
Sbjct: 346 SETEDDEDGDDEDDDADDDDDDEGE 420



 Score = 32.3 bits (72), Expect = 0.16
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +1

Query: 2   SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           ++D +TE  +D DD++DD D DD++  E+
Sbjct: 337 NKDSETEDDEDGDDEDDDADDDDDDEGED 423



 Score = 31.2 bits (69), Expect = 0.36
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDE 29
           +D D +  DDD DD+DDD+ +D   DE
Sbjct: 358 DDEDGDDEDDDADDDDDDEGEDYSGDE 438


>TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associated
           complex alpha chain, partial (58%)
          Length = 600

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +2

Query: 6   DTEAIDDDDDDEDDDDTDDEETDEEL 31
           D E + +DDD++DDD+ DD+E D+ +
Sbjct: 119 DDEPVVEDDDEDDDDEDDDDEDDDNI 196



 Score = 34.3 bits (77), Expect = 0.043
 Identities = 14/26 (53%), Positives = 19/26 (72%)
 Frame = +2

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETD 28
           ED D +  D+DDDDEDDD+ + +E D
Sbjct: 137 EDDDEDDDDEDDDDEDDDNIEGQEGD 214



 Score = 33.9 bits (76), Expect = 0.056
 Identities = 15/38 (39%), Positives = 24/38 (62%), Gaps = 5/38 (13%)
 Frame = +2

Query: 1   MSEDIDTEAIDDD-----DDDEDDDDTDDEETDEELYE 33
           ++  ++ + I DD     DDDEDDDD DD++ D++  E
Sbjct: 86  LAAHLEQQKIHDDEPVVEDDDEDDDDEDDDDEDDDNIE 199



 Score = 30.0 bits (66), Expect = 0.81
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 5   IDTEAIDDDDDDEDDDDTDDEETDE 29
           ++ +  DDDD+D+DD+D D+ E  E
Sbjct: 134 VEDDDEDDDDEDDDDEDDDNIEGQE 208



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  DDDDDDEDDDDTDDEETDEE 30
           +DDDD++DDD+ DD    +E
Sbjct: 149 EDDDDEDDDDEDDDNIEGQE 208


>AV410371 
          Length = 347

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDD---DTDDEETDEELYEAIYMYM 39
           +D D + ++DDDDD D+D   DTD    DE+++E  Y  M
Sbjct: 228 QDDDEDMVEDDDDDADEDPGYDTDLYYDDEDIFEDDYSNM 347


>CB826779 
          Length = 469

 Score = 34.7 bits (78), Expect = 0.033
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +1

Query: 3   EDIDTEAIDDDDDDEDDDDTDD 24
           ED+  EA +D+DDDEDD+D +D
Sbjct: 205 EDVHDEADEDEDDDEDDEDDED 270



 Score = 30.0 bits (66), Expect = 0.81
 Identities = 12/27 (44%), Positives = 19/27 (69%), Gaps = 2/27 (7%)
 Frame = +1

Query: 6   DTEAIDD--DDDDEDDDDTDDEETDEE 30
           D   ++D  D+ DED+DD +D+E DE+
Sbjct: 190 DAPVVEDVHDEADEDEDDDEDDEDDED 270



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           ++ D   + +D  DE D+D DD+E DE+
Sbjct: 178 QEYDDAPVVEDVHDEADEDEDDDEDDED 261


>TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
           thaliana {Arabidopsis thaliana;}, partial (75%)
          Length = 1083

 Score = 34.3 bits (77), Expect = 0.043
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 3   EDIDTEAID--DDDDDEDDDDTDDEETDEEL 31
           ED+  +  D  DDD+DEDDDD DD++ D  L
Sbjct: 222 EDVKDDDKDEADDDEDEDDDDEDDDKEDGAL 314



 Score = 32.0 bits (71), Expect = 0.21
 Identities = 12/26 (46%), Positives = 19/26 (72%)
 Frame = +3

Query: 1   MSEDIDTEAIDDDDDDEDDDDTDDEE 26
           + +D   EA DD+D+D+DD+D D E+
Sbjct: 228 VKDDDKDEADDDEDEDDDDEDDDKED 305



 Score = 26.9 bits (58), Expect = 6.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
           ++ D   ++D  DD+ D+  DDE+ D++
Sbjct: 198 QEDDAPIVEDVKDDDKDEADDDEDEDDD 281


>TC8507 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
          HD2-P39, partial (40%)
          Length = 620

 Score = 33.5 bits (75), Expect = 0.073
 Identities = 11/23 (47%), Positives = 20/23 (86%)
 Frame = +3

Query: 12 DDDDDEDDDDTDDEETDEELYEA 34
          D++DD DD+D +D+++DEE+ +A
Sbjct: 3  DEEDDSDDEDDEDDDSDEEMDDA 71



 Score = 31.6 bits (70), Expect = 0.28
 Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 7/35 (20%)
 Frame = +3

Query: 3  EDIDTEAIDDDDDDE-------DDDDTDDEETDEE 30
          +D D E  +DDD DE       D D++D ++TDEE
Sbjct: 12 DDSDDEDDEDDDSDEEMDDADSDSDESDSDDTDEE 116



 Score = 30.4 bits (67), Expect = 0.62
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 8  EAIDDDDDDEDDDDTDDEETDEE 30
          E  D DD+D++DDD+D+E  D +
Sbjct: 6  EEDDSDDEDDEDDDSDEEMDDAD 74



 Score = 28.5 bits (62), Expect = 2.3
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 3  EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
          ++ D    +DD+DD+ D++ DD ++D +
Sbjct: 3  DEEDDSDDEDDEDDDSDEEMDDADSDSD 86


>BI417786 
          Length = 513

 Score = 33.5 bits (75), Expect = 0.073
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -2

Query: 12  DDDDDEDDDDTDDEETDEEL 31
           DDDDD+DDDD DDE+  + L
Sbjct: 152 DDDDDDDDDDDDDEKGGKRL 93



 Score = 31.6 bits (70), Expect = 0.28
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -2

Query: 11  DDDDDDEDDDDTDDE 25
           DDDDDD+DDDD D++
Sbjct: 152 DDDDDDDDDDDDDEK 108



 Score = 27.7 bits (60), Expect = 4.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 11  DDDDDDEDDDDTDDEETDEE 30
           D    D+DDDD DD++ DE+
Sbjct: 167 DGGGHDDDDDDDDDDDDDEK 108


>TC8119 similar to UP|Q9FFF5 (Q9FFF5) Nucleic acid binding protein-like,
           partial (85%)
          Length = 1249

 Score = 33.5 bits (75), Expect = 0.073
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 3   EDIDTEAIDDDDDDEDDDDTDDEETDEEL 31
           E+   +A DDDDDD+DDDD++ +   E L
Sbjct: 184 EEEIADACDDDDDDDDDDDSEGK*ESESL 98



 Score = 28.1 bits (61), Expect = 3.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 12  DDDDDEDDDDTDDEETDEELYE 33
           DDDDD+DDDD  + + + E  E
Sbjct: 160 DDDDDDDDDDDSEGK*ESESLE 95


>BP073359 
          Length = 388

 Score = 33.5 bits (75), Expect = 0.073
 Identities = 14/32 (43%), Positives = 24/32 (74%), Gaps = 2/32 (6%)
 Frame = -3

Query: 3   EDIDTEAIDDDDD--DEDDDDTDDEETDEELY 32
           +++DT   +D+DD  DED+DDT ++E D+ +Y
Sbjct: 230 DEVDTLEDEDEDDTLDEDEDDTVEDEDDDIIY 135


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.326    0.140    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,223,332
Number of Sequences: 28460
Number of extensions: 100729
Number of successful extensions: 2306
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of query: 447
length of database: 4,897,600
effective HSP length: 93
effective length of query: 354
effective length of database: 2,250,820
effective search space: 796790280
effective search space used: 796790280
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)


Medicago: description of AC146551.12