
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146551.12 + phase: 0 /pseudo
(447 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP044361 100 4e-22
TC14927 weakly similar to GB|BAC16200.1|22831356|AP005486 transp... 74 5e-14
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 40 8e-04
AV427438 40 0.001
TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 gluc... 39 0.001
AV773558 39 0.002
AW164001 39 0.002
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 38 0.003
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 37 0.007
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 37 0.007
TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%) 37 0.009
BI419972 36 0.011
TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associ... 35 0.019
AV410371 35 0.019
CB826779 35 0.033
TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Ara... 34 0.043
TC8507 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetyla... 33 0.073
BI417786 33 0.073
TC8119 similar to UP|Q9FFF5 (Q9FFF5) Nucleic acid binding protei... 33 0.073
BP073359 33 0.073
>BP044361
Length = 542
Score = 100 bits (250), Expect = 4e-22
Identities = 63/205 (30%), Positives = 96/205 (46%)
Frame = +1
Query: 76 DYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIREKTPLVDTRFICIEEMLASFLQIVGQN 135
+++ + LNG + FR++ RM VF KLC I+R++T L DT + IEE LA FL I+G N
Sbjct: 82 EFMAEVLNGHDDFFREMLRMDKHVFHKLCDILRQRTLLRDTPGVMIEEQLAIFLNIIGHN 261
Query: 136 TRYCIIRNTFGRSQFAASENFHKILKALNSIAPDLMAKPTSSVPAKIRESTRFYPYFKIL 195
R +I+ F S S +F+ +LKA+ S++ +++ P + P +I S R+YPYFK
Sbjct: 262 ERNRVIQERFQHSGETISRHFNNVLKAVKSLSREVLQPPQPTTPPEILNSARYYPYFK-- 435
Query: 196 YN*KYIWPITICCK*KFSQDFEGFELNST*FDG*TNLKRACKNKGKHKILSLLQAIDGTH 255
+ IDG
Sbjct: 436 --------------------------------------------------DCIGVIDGMQ 465
Query: 256 IPALVRGRDVSSYRDRHGRISQNVL 280
IPA V +D S +R++ G ++QNVL
Sbjct: 466 IPAHVPAKDHSRFRNKKGILAQNVL 540
>TC14927 weakly similar to GB|BAC16200.1|22831356|AP005486 transposase-like
{Oryza sativa (japonica cultivar-group);} , partial
(11%)
Length = 539
Score = 73.9 bits (180), Expect = 5e-14
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +3
Query: 264 DVSSYRDRHGRISQNVLAACNFDLEFMYVLSGWEGSAHDSKLLNDALKRKNGLKVPHG 321
D YR+R G IS NVL C DL+F+YVL GWEGSA DS++L DAL+R+N L++P+G
Sbjct: 6 DKPRYRNRKGDISTNVLGVCGPDLKFIYVLPGWEGSAGDSRVLRDALRRQNHLQIPNG 179
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 40.0 bits (92), Expect = 8e-04
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
E+ D E DDDDDD+DDDD ++EE D++
Sbjct: 273 EEEDDEDEDDDDDDDDDDDGEEEEDDDD 356
Score = 39.3 bits (90), Expect = 0.001
Identities = 16/28 (57%), Positives = 21/28 (74%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
ED D E D+D+DD+DDDD DD+ +EE
Sbjct: 261 EDDDEEEDDEDEDDDDDDDDDDDGEEEE 344
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
E+ D E DD+D+D+DDDD DD++ +EE
Sbjct: 258 EEDDDEEEDDEDEDDDDDDDDDDDGEEE 341
Score = 36.2 bits (82), Expect = 0.011
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+D + E +D+DDD+DDDD DD E +E+
Sbjct: 264 DDDEEEDDEDEDDDDDDDDDDDGEEEED 347
Score = 35.8 bits (81), Expect = 0.015
Identities = 19/35 (54%), Positives = 21/35 (59%), Gaps = 4/35 (11%)
Frame = +3
Query: 3 EDIDTEAIDDDDDD----EDDDDTDDEETDEELYE 33
ED D + DDDDDD EDDDD D+EE E E
Sbjct: 288 EDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVE 392
Score = 35.8 bits (81), Expect = 0.015
Identities = 13/28 (46%), Positives = 21/28 (74%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
E+ D + DDDDDD+DDD ++E+ D++
Sbjct: 276 EEDDEDEDDDDDDDDDDDGEEEEDDDDD 359
Score = 35.4 bits (80), Expect = 0.019
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEE 30
D E +DDD++EDD+D DD++ D++
Sbjct: 246 DNEEEEDDDEEEDDEDEDDDDDDDD 320
Score = 35.4 bits (80), Expect = 0.019
Identities = 13/28 (46%), Positives = 21/28 (74%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+D + + D+DDDD+DDDD D EE +++
Sbjct: 267 DDEEEDDEDEDDDDDDDDDDDGEEEEDD 350
Score = 35.4 bits (80), Expect = 0.019
Identities = 13/28 (46%), Positives = 21/28 (74%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
E+ D + +DD+D++DDDD DD++ EE
Sbjct: 255 EEEDDDEEEDDEDEDDDDDDDDDDDGEE 338
Score = 35.4 bits (80), Expect = 0.019
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDD--DDTDDEETDEE 30
ED + E DDDDDD+DD ++ DD++ DEE
Sbjct: 279 EDDEDEDDDDDDDDDDDGEEEEDDDDDDEE 368
Score = 35.0 bits (79), Expect = 0.025
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+E+ + + ++DD+DEDDDD DD++ D E
Sbjct: 249 NEEEEDDDEEEDDEDEDDDDDDDDDDDGE 335
Score = 33.5 bits (75), Expect = 0.073
Identities = 11/29 (37%), Positives = 23/29 (78%)
Frame = +3
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+++ + E D+++DDED+DD DD++ D++
Sbjct: 243 TDNEEEEDDDEEEDDEDEDDDDDDDDDDD 329
Score = 31.6 bits (70), Expect = 0.28
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +3
Query: 5 IDTEAIDDDDDDEDDDDTDDEETDEE 30
+ T+ +++DDDE++DD D+++ D++
Sbjct: 237 VQTDNEEEEDDDEEEDDEDEDDDDDD 314
Score = 27.7 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 18/26 (68%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETD 28
+D E DDDDDDE+++ +++ E +
Sbjct: 321 DDDGEEEEDDDDDDEEEEGSEEVEVE 398
Score = 27.3 bits (59), Expect = 5.2
Identities = 10/28 (35%), Positives = 18/28 (63%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+D D ++DDDD+D+++ EE + E
Sbjct: 315 DDDDDGEEEEDDDDDDEEEEGSEEVEVE 398
>AV427438
Length = 182
Score = 39.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 58 GEHVERPLTRRRITSKGYDYIHKSLNGDSEIFRQVYRMYPDVFRKLCMIIR 108
G H+ + L+R + S G ++ + LNG +E+ + +RM DVF KLC I++
Sbjct: 35 GSHIPKELSR--LASTGLKFVDEVLNGQNELCLENFRMDKDVFYKLCDILQ 181
>TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 glucosidase
SCW10 precursor (Soluble cell wall protein 10) ,
partial (6%)
Length = 1209
Score = 39.3 bits (90), Expect = 0.001
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+D D + DDDDDD+DDDD DD++ D++
Sbjct: 83 DDDDDDDDDDDDDDDDDDDDDDDDGDKK 166
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEELYEAIYMYMMAIHALMHVVNQF 52
+D D + DDDDDD+DDDD D ++ D + A+ ++A L+ V F
Sbjct: 98 DDDDDDDDDDDDDDDDDDDGDKKQPDSDTGTALKGTLLAGVLLLGFVGGF 247
>AV773558
Length = 469
Score = 38.9 bits (89), Expect = 0.002
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 4/32 (12%)
Frame = -2
Query: 3 EDIDTEAI----DDDDDDEDDDDTDDEETDEE 30
E++D + + +DDDDD+DDDD DD+ TD+E
Sbjct: 402 EELDDDFVLVYSEDDDDDDDDDDDDDDYTDDE 307
Score = 37.7 bits (86), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
SED D DDDDDD+DDDD D+E +EE
Sbjct: 369 SEDDD----DDDDDDDDDDDYTDDEDEEE 295
Score = 27.7 bits (60), Expect = 4.0
Identities = 13/28 (46%), Positives = 18/28 (63%), Gaps = 3/28 (10%)
Frame = -2
Query: 8 EAIDDDDD---DEDDDDTDDEETDEELY 32
E +DDD EDDDD DD++ D++ Y
Sbjct: 402 EELDDDFVLVYSEDDDDDDDDDDDDDDY 319
>AW164001
Length = 447
Score = 38.5 bits (88), Expect = 0.002
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEET 27
ED+D + DDDDDD+DDDD D+ T
Sbjct: 70 EDVDEDFDDDDDDDDDDDDDDEPAT 144
Score = 35.4 bits (80), Expect = 0.019
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 8 EAIDDDDDDEDDDDTDDEETDE 29
E +D+D DD+DDDD DD++ DE
Sbjct: 70 EDVDEDFDDDDDDDDDDDDDDE 135
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/28 (42%), Positives = 20/28 (70%)
Frame = +1
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+++ E D+D D+DDDD DD++ D+E
Sbjct: 52 DEVYKEEDVDEDFDDDDDDDDDDDDDDE 135
Score = 30.0 bits (66), Expect = 0.81
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 1 MSEDIDTEAIDDDDDDEDDD 20
+ ED D + DDDDDD+DD+
Sbjct: 76 VDEDFDDDDDDDDDDDDDDE 135
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEE 30
D E ++D DED DD DD++ D++
Sbjct: 49 DDEVYKEEDVDEDFDDDDDDDDDDD 123
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEE 30
+ E DDDDD+E++DD DD+E DEE
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDDEE 871
Score = 37.7 bits (86), Expect = 0.004
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
ED D + +DDDDDE+++D DD++ D+E
Sbjct: 785 EDGDEDEDEDDDDDEEEEDDDDDDEDDE 868
Score = 36.6 bits (83), Expect = 0.009
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 4 DIDTEAIDDDDDDEDDDDTDDEETDE 29
D D + DDDD++E+DDD DDE+ +E
Sbjct: 794 DEDEDEDDDDDEEEEDDDDDDEDDEE 871
Score = 36.2 bits (82), Expect = 0.011
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
EDI+ + D D+D+++DDD D+EE D++
Sbjct: 764 EDIEEDDEDGDEDEDEDDDDDEEEEDDD 847
Score = 35.0 bits (79), Expect = 0.025
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+E D E I++DD+D D+D+ +D++ DEE
Sbjct: 746 AEQSDFEDIEEDDEDGDEDEDEDDDDDEE 832
Score = 33.9 bits (76), Expect = 0.056
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+D D + +D+DDD+D+++ DD++ DE+
Sbjct: 779 DDEDGDEDEDEDDDDDEEEEDDDDDDED 862
Score = 32.7 bits (73), Expect = 0.12
Identities = 12/27 (44%), Positives = 20/27 (73%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDE 29
ED D + DD+++++DDDD +D+E E
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDDEEGE 877
Score = 26.6 bits (57), Expect = 8.9
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEE 30
+ E D +D +EDD+D D++E +++
Sbjct: 743 EAEQSDFEDIEEDDEDGDEDEDEDD 817
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 37.0 bits (84), Expect = 0.007
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 11 DDDDDDEDDDDTDDEETDEELYEAIYMYMMAIHA 44
D DDDD+DDDD D+EE +EE Y+ + A
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTEYLVRRTVAA 271
Score = 34.7 bits (78), Expect = 0.033
Identities = 17/35 (48%), Positives = 21/35 (59%), Gaps = 7/35 (20%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDT-------DDEETDEE 30
ED D + DDD D++DDDD DDEE +EE
Sbjct: 29 EDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEE 133
Score = 30.4 bits (67), Expect = 0.62
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 11 DDDDDDEDDDDTDDEETDEE 30
D+DDDD+ +DD DE+ D++
Sbjct: 26 DEDDDDDGEDDDGDEDDDDD 85
Score = 30.0 bits (66), Expect = 0.81
Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 5/35 (14%)
Frame = +2
Query: 1 MSEDIDTEAIDDDDDDEDDDDTD-----DEETDEE 30
MS D D + +DDD ++DDD D D++ DEE
Sbjct: 17 MSGDEDDDDDGEDDDGDEDDDDDAPGGGDDDDDEE 121
Score = 29.3 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEE 30
D + DDDDDD+D+++ ++E+ E
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTE 244
Score = 28.9 bits (63), Expect = 1.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 4 DIDTEAIDDDDDDEDDDDTDDEETD 28
D D + DDDDDDE++++ +D T+
Sbjct: 170 DPDDDDDDDDDDDEEEEEEEDLGTE 244
Score = 28.5 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 7 TEAIDDDDDDEDDDDTDDEETDEE 30
T D+DDD+D +D D +E D++
Sbjct: 11 TRMSGDEDDDDDGEDDDGDEDDDD 82
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 37.0 bits (84), Expect = 0.007
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 3 EDIDTE-AIDDDDDDEDDDDTDDEETDEE 30
ED D E DDDDDDEDDD+ DD DEE
Sbjct: 422 EDEDGEDQEDDDDDDEDDDEEDDGGEDEE 336
Score = 34.7 bits (78), Expect = 0.033
Identities = 14/26 (53%), Positives = 19/26 (72%)
Frame = -2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETD 28
ED + E +D +DD+DDD+ DDEE D
Sbjct: 431 EDEEDEDGEDQEDDDDDDEDDDEEDD 354
Score = 34.3 bits (77), Expect = 0.043
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 13/46 (28%)
Frame = -2
Query: 3 EDIDTEAIDDDDDDEDDD-------------DTDDEETDEELYEAI 35
ED + + DD+DDDE+DD D +DEE DEE EA+
Sbjct: 407 EDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEAL 270
Score = 30.0 bits (66), Expect = 0.81
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = -2
Query: 11 DDDDDDED--DDDTDDEETDEE 30
++D+D ED DDD DDE+ DEE
Sbjct: 425 EEDEDGEDQEDDDDDDEDDDEE 360
>TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%)
Length = 517
Score = 36.6 bits (83), Expect = 0.009
Identities = 14/30 (46%), Positives = 22/30 (72%)
Frame = +1
Query: 1 MSEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
+S+ ++ DDDDD ED+DD D+E+ D+E
Sbjct: 109 LSDGSSSDDDDDDDDSEDEDDDDNEDDDDE 198
>BI419972
Length = 498
Score = 36.2 bits (82), Expect = 0.011
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 6 DTEAIDDDDDDEDDDDTDDEETDE 29
D+E DD+D D++DDD DD++ DE
Sbjct: 343 DSETEDDEDGDDEDDDADDDDDDE 414
Score = 33.1 bits (74), Expect = 0.095
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEE 26
SE D E DD+DDD DDDD D+ E
Sbjct: 346 SETEDDEDGDDEDDDADDDDDDEGE 420
Score = 32.3 bits (72), Expect = 0.16
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 2 SEDIDTEAIDDDDDDEDDDDTDDEETDEE 30
++D +TE +D DD++DD D DD++ E+
Sbjct: 337 NKDSETEDDEDGDDEDDDADDDDDDEGED 423
Score = 31.2 bits (69), Expect = 0.36
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDE 29
+D D + DDD DD+DDD+ +D DE
Sbjct: 358 DDEDGDDEDDDADDDDDDEGEDYSGDE 438
>TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associated
complex alpha chain, partial (58%)
Length = 600
Score = 35.4 bits (80), Expect = 0.019
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 6 DTEAIDDDDDDEDDDDTDDEETDEEL 31
D E + +DDD++DDD+ DD+E D+ +
Sbjct: 119 DDEPVVEDDDEDDDDEDDDDEDDDNI 196
Score = 34.3 bits (77), Expect = 0.043
Identities = 14/26 (53%), Positives = 19/26 (72%)
Frame = +2
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETD 28
ED D + D+DDDDEDDD+ + +E D
Sbjct: 137 EDDDEDDDDEDDDDEDDDNIEGQEGD 214
Score = 33.9 bits (76), Expect = 0.056
Identities = 15/38 (39%), Positives = 24/38 (62%), Gaps = 5/38 (13%)
Frame = +2
Query: 1 MSEDIDTEAIDDD-----DDDEDDDDTDDEETDEELYE 33
++ ++ + I DD DDDEDDDD DD++ D++ E
Sbjct: 86 LAAHLEQQKIHDDEPVVEDDDEDDDDEDDDDEDDDNIE 199
Score = 30.0 bits (66), Expect = 0.81
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 5 IDTEAIDDDDDDEDDDDTDDEETDE 29
++ + DDDD+D+DD+D D+ E E
Sbjct: 134 VEDDDEDDDDEDDDDEDDDNIEGQE 208
Score = 28.9 bits (63), Expect = 1.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 11 DDDDDDEDDDDTDDEETDEE 30
+DDDD++DDD+ DD +E
Sbjct: 149 EDDDDEDDDDEDDDNIEGQE 208
>AV410371
Length = 347
Score = 35.4 bits (80), Expect = 0.019
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDD---DTDDEETDEELYEAIYMYM 39
+D D + ++DDDDD D+D DTD DE+++E Y M
Sbjct: 228 QDDDEDMVEDDDDDADEDPGYDTDLYYDDEDIFEDDYSNM 347
>CB826779
Length = 469
Score = 34.7 bits (78), Expect = 0.033
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 3 EDIDTEAIDDDDDDEDDDDTDD 24
ED+ EA +D+DDDEDD+D +D
Sbjct: 205 EDVHDEADEDEDDDEDDEDDED 270
Score = 30.0 bits (66), Expect = 0.81
Identities = 12/27 (44%), Positives = 19/27 (69%), Gaps = 2/27 (7%)
Frame = +1
Query: 6 DTEAIDD--DDDDEDDDDTDDEETDEE 30
D ++D D+ DED+DD +D+E DE+
Sbjct: 190 DAPVVEDVHDEADEDEDDDEDDEDDED 270
Score = 28.9 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
++ D + +D DE D+D DD+E DE+
Sbjct: 178 QEYDDAPVVEDVHDEADEDEDDDEDDED 261
>TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana {Arabidopsis thaliana;}, partial (75%)
Length = 1083
Score = 34.3 bits (77), Expect = 0.043
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 3 EDIDTEAID--DDDDDEDDDDTDDEETDEEL 31
ED+ + D DDD+DEDDDD DD++ D L
Sbjct: 222 EDVKDDDKDEADDDEDEDDDDEDDDKEDGAL 314
Score = 32.0 bits (71), Expect = 0.21
Identities = 12/26 (46%), Positives = 19/26 (72%)
Frame = +3
Query: 1 MSEDIDTEAIDDDDDDEDDDDTDDEE 26
+ +D EA DD+D+D+DD+D D E+
Sbjct: 228 VKDDDKDEADDDEDEDDDDEDDDKED 305
Score = 26.9 bits (58), Expect = 6.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
++ D ++D DD+ D+ DDE+ D++
Sbjct: 198 QEDDAPIVEDVKDDDKDEADDDEDEDDD 281
>TC8507 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (40%)
Length = 620
Score = 33.5 bits (75), Expect = 0.073
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 12 DDDDDEDDDDTDDEETDEELYEA 34
D++DD DD+D +D+++DEE+ +A
Sbjct: 3 DEEDDSDDEDDEDDDSDEEMDDA 71
Score = 31.6 bits (70), Expect = 0.28
Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 7/35 (20%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDE-------DDDDTDDEETDEE 30
+D D E +DDD DE D D++D ++TDEE
Sbjct: 12 DDSDDEDDEDDDSDEEMDDADSDSDESDSDDTDEE 116
Score = 30.4 bits (67), Expect = 0.62
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 8 EAIDDDDDDEDDDDTDDEETDEE 30
E D DD+D++DDD+D+E D +
Sbjct: 6 EEDDSDDEDDEDDDSDEEMDDAD 74
Score = 28.5 bits (62), Expect = 2.3
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEE 30
++ D +DD+DD+ D++ DD ++D +
Sbjct: 3 DEEDDSDDEDDEDDDSDEEMDDADSDSD 86
>BI417786
Length = 513
Score = 33.5 bits (75), Expect = 0.073
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2
Query: 12 DDDDDEDDDDTDDEETDEEL 31
DDDDD+DDDD DDE+ + L
Sbjct: 152 DDDDDDDDDDDDDEKGGKRL 93
Score = 31.6 bits (70), Expect = 0.28
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2
Query: 11 DDDDDDEDDDDTDDE 25
DDDDDD+DDDD D++
Sbjct: 152 DDDDDDDDDDDDDEK 108
Score = 27.7 bits (60), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 11 DDDDDDEDDDDTDDEETDEE 30
D D+DDDD DD++ DE+
Sbjct: 167 DGGGHDDDDDDDDDDDDDEK 108
>TC8119 similar to UP|Q9FFF5 (Q9FFF5) Nucleic acid binding protein-like,
partial (85%)
Length = 1249
Score = 33.5 bits (75), Expect = 0.073
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 3 EDIDTEAIDDDDDDEDDDDTDDEETDEEL 31
E+ +A DDDDDD+DDDD++ + E L
Sbjct: 184 EEEIADACDDDDDDDDDDDSEGK*ESESL 98
Score = 28.1 bits (61), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 12 DDDDDEDDDDTDDEETDEELYE 33
DDDDD+DDDD + + + E E
Sbjct: 160 DDDDDDDDDDDSEGK*ESESLE 95
>BP073359
Length = 388
Score = 33.5 bits (75), Expect = 0.073
Identities = 14/32 (43%), Positives = 24/32 (74%), Gaps = 2/32 (6%)
Frame = -3
Query: 3 EDIDTEAIDDDDD--DEDDDDTDDEETDEELY 32
+++DT +D+DD DED+DDT ++E D+ +Y
Sbjct: 230 DEVDTLEDEDEDDTLDEDEDDTVEDEDDDIIY 135
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.326 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,223,332
Number of Sequences: 28460
Number of extensions: 100729
Number of successful extensions: 2306
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of query: 447
length of database: 4,897,600
effective HSP length: 93
effective length of query: 354
effective length of database: 2,250,820
effective search space: 796790280
effective search space used: 796790280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Medicago: description of AC146551.12