BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146342.2 + phase: 0
(340 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC7966 similar to UP|Q84V25 (Q84V25) Quinone oxidoreductase, par... 291 1e-79
TC18928 similar to UP|Q43677 (Q43677) Auxin-induced protein, par... 149 9e-37
TC19020 141 2e-34
BP038982 135 1e-32
TC8579 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial ... 134 2e-32
TC9889 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1 ... 94 4e-20
AW719877 81 3e-16
BI420064 71 2e-13
BP038466 63 8e-11
AV767419 61 2e-10
TC8042 homologue to UP|P93619 (P93619) Probable NADP-dependent o... 60 7e-10
TC8891 similar to GB|AAP68279.1|31711846|BT008840 At1g72680 {Ara... 54 4e-08
TC12763 similar to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol dehyd... 54 4e-08
TC17336 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial... 52 1e-07
TC16542 similar to UP|Q93X81 (Q93X81) Sorbitol dehydrogenase, pa... 45 2e-05
AV771699 44 5e-05
BP038362 43 7e-05
TC10894 weakly similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreduct... 42 2e-04
TC13188 similar to GB|AAL24178.1|16604344|AY058070 AT5g16970/F2K... 41 3e-04
BF177485 39 0.001
>TC7966 similar to UP|Q84V25 (Q84V25) Quinone oxidoreductase, partial (98%)
Length = 1908
Score = 291 bits (744), Expect = 1e-79
Identities = 155/312 (49%), Positives = 210/312 (66%), Gaps = 5/312 (1%)
Frame = +2
Query: 3 KAWFYEEYGPK-EVLKLG-DFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFP---SDF 57
KAW Y EYG ++LK + P+P E+ +L++V AAALNPID KR M +F S
Sbjct: 737 KAWTYSEYGKSTDILKFDPNVPLPELKEDHVLIKVVAAALNPIDYKR-MEALFKDTDSPL 913
Query: 58 PAVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLVAR 117
P PG D+AGVV+ G VKKF +GDEVYG+I + N++E PK +G+LA++ VEE L+A
Sbjct: 914 PTAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINE-NALEYPKVVGSLAEYTAVEEKLLAH 1090
Query: 118 KPKRLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASY 177
KPK LSF EAASLPLA++TA EG + F G+++ V+GGAGGVGT V+QLAK +FGAS
Sbjct: 1091 KPKNLSFVEAASLPLAIETAYEGLERAGFSAGKSILVLGGAGGVGTHVIQLAKHVFGASK 1270
Query: 178 VVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFIYDTVGDCKKSFVVAKKDGAIV 237
V ++ ST KL+ +++ GAD +DYTK E++ EKFD ++D VGD +F K+ G V
Sbjct: 1271 VAATSSTGKLELLRKLGADMPIDYTKENVENLPEKFDVVFDAVGDADTTFKPLKEGGKFV 1450
Query: 238 DITWPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETG 297
I PA A+Y L G +LEKL+PYLE G++K ++DPK + F ++AF Y+ET
Sbjct: 1451 TIVPPALPPPAIYYILKSDGAVLEKLKPYLESGKVKPILDPKSPFPFSQTVEAFSYLETN 1630
Query: 298 RAWGKVVVTCFP 309
RA GKVV+ P
Sbjct: 1631 RAVGKVVIHPIP 1666
>TC18928 similar to UP|Q43677 (Q43677) Auxin-induced protein, partial (53%)
Length = 612
Score = 149 bits (375), Expect = 9e-37
Identities = 81/165 (49%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
Frame = +1
Query: 3 KAWFYEEYGPK-EVLKLG-DFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSD--FP 58
KAW Y E+G +VLK + P+P E+Q+L++V AA+LNPID KR SD P
Sbjct: 91 KAWAYSEHGKSVDVLKFDPNLPLPELKEDQVLIKVAAASLNPIDYKRMEGAFKASDSPLP 270
Query: 59 AVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLVARK 118
PG D+AGVV+ G VKKF +GDEVYG+I + +M PK +G+LA++ EE L++ K
Sbjct: 271 TAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINE-QAMVYPKVVGSLAEYTAAEEKLLSHK 447
Query: 119 PKRLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGT 163
P+ LSF EAASLPL ++TA G + F G+++ V+GGAGGVGT
Sbjct: 448 PQNLSFAEAASLPLTIETAYNGLELAGFSAGKSILVLGGAGGVGT 582
>TC19020
Length = 438
Score = 141 bits (355), Expect = 2e-34
Identities = 71/103 (68%), Positives = 81/103 (77%), Gaps = 1/103 (0%)
Frame = +1
Query: 239 ITWPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGR 298
ITWP SH RAVYSSLTV GE LEKL PYLERGELKAVIDP G Y F+NVI+AF Y+ETGR
Sbjct: 1 ITWPPSHPRAVYSSLTVSGESLEKLEPYLERGELKAVIDPTGPYHFDNVIEAFRYLETGR 180
Query: 299 AWGKVVVTCFPMAPKDRHSTILSEIDTNIPQ-VNGFAKDLCLK 340
AWGKVV++CFP+ HS ILS NI + NGF++D+CLK
Sbjct: 181 AWGKVVISCFPLG-DPHHSPILSGAKPNIGENGNGFSEDVCLK 306
>BP038982
Length = 543
Score = 135 bits (340), Expect = 1e-32
Identities = 65/141 (46%), Positives = 95/141 (67%)
Frame = -1
Query: 169 AKLMFGASYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFIYDTVGDCKKSFV 228
AK ++GAS + ++ ST KL+ +++ GAD +DYTK +ED+ EKFD +YDTVG + +F
Sbjct: 543 AKHVYGASKIAATSSTGKLELLRKLGADTPIDYTKENFEDLPEKFDVVYDTVGQTESAFK 364
Query: 229 VAKKDGAIVDITWPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVI 288
V K+ G +V I P A++ LT G +LEKLRP+LE G++K ++DPK + F +
Sbjct: 363 VLKEGGKVVTIV-PPGLPPAIFFVLTSDGAVLEKLRPFLESGKVKPILDPKSPFPFSQTV 187
Query: 289 DAFGYIETGRAWGKVVVTCFP 309
+AF Y+ETGRA GKVV+ P
Sbjct: 186 EAFSYLETGRATGKVVIHPIP 124
>TC8579 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial (40%)
Length = 619
Score = 134 bits (338), Expect = 2e-32
Identities = 64/155 (41%), Positives = 99/155 (63%)
Frame = +3
Query: 155 VGGAGGVGTLVLQLAKLMFGASYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFD 214
+ G+GGVG+L +QLAK +FGA+ V ++ ST L+ +K G D +DYTK +ED+ EKFD
Sbjct: 3 LNGSGGVGSLAIQLAKQVFGAARVAATSSTRNLELLKSLGVDLAIDYTKENFEDLPEKFD 182
Query: 215 FIYDTVGDCKKSFVVAKKDGAIVDITWPASHERAVYSSLTVCGEILEKLRPYLERGELKA 274
+YD +G C ++ ++ G++V +T + + +T G +L KL PYLE G++K
Sbjct: 183 VVYDAIGQCDRAVKAIQEGGSVVALTGAVTPPGFRF-VVTSNGTVLRKLNPYLESGKVKP 359
Query: 275 VIDPKGEYDFENVIDAFGYIETGRAWGKVVVTCFP 309
++D KG + F + +AF Y+ET RA GKVV+ P
Sbjct: 360 IVDSKGPFPFTQLAEAFSYLETNRATGKVVIHPIP 464
>TC9889 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1
(Fragment), partial (49%)
Length = 528
Score = 93.6 bits (231), Expect = 4e-20
Identities = 63/174 (36%), Positives = 94/174 (53%), Gaps = 11/174 (6%)
Frame = +1
Query: 1 MQKAWFYEEYGPKEV-LKLGDFPIPSPLENQLLVQVYAAALNPID---SKRRMRPIF-PS 55
M A Y+ YG LK + P+PSP +N++L+++ AA++NP+D K +RP+F P
Sbjct: 22 MMHAVQYDAYGGGAAGLKHVEVPVPSPKKNEVLLRLEAASINPVDWKIQKGVLRPLFLPR 201
Query: 56 DFPAVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLV 115
FP +P D+AG V G VK F +GD+V + + G LA+F V E L
Sbjct: 202 SFPHIPCTDVAGEVAEVGPQVKDFKVGDKVIAKL-------STQYGGGLAEFAVASETLT 360
Query: 116 ARKPKRLSFEEAASLPLAVQTA------IEGFKTGDFKKGETMFVVGGAGGVGT 163
A +P ++S EAA LP+A TA I G K + + + + V +GGVG+
Sbjct: 361 AARPSQVSPAEAAGLPIAGLTARDALTQIAGVKLHETGQPKNILVTAASGGVGS 522
>AW719877
Length = 520
Score = 80.9 bits (198), Expect = 3e-16
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Frame = +2
Query: 60 VPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLVARKP 119
V G D AG V+ G + F GD+V+ ++ P+ GT A+F +V+E LV RKP
Sbjct: 41 VLGWDAAGRVVATGQDASLFKPGDDVF-----YSGALAPQ--GTNAEFHLVDERLVGRKP 199
Query: 120 KRLSFEEAASLPLAVQTAIEG-FKTGDFKK-----GETMFVVGGAGGVGTLVLQLAKLMF 173
L + +AA+LPL TA E F D KK + ++GGAGGVG++ +QLA+ +
Sbjct: 200 SSLDYAQAAALPLTAITAFEALFDRLDVKKPVVGAANAILIIGGAGGVGSIAVQLARQLT 379
Query: 174 GASYVVSSCSTPKLK-FVKQFGADKVVDYTK 203
+ V+++ S P+ + +V GA V+D++K
Sbjct: 380 DLT-VIATASRPETRDWVLGLGAHHVIDHSK 469
>BI420064
Length = 410
Score = 71.2 bits (173), Expect = 2e-13
Identities = 37/91 (40%), Positives = 56/91 (60%), Gaps = 4/91 (4%)
Frame = +3
Query: 7 YEEYGP-KEVLKLGDFPIPSPLENQLLVQVYAAALNPIDSK---RRMRPIFPSDFPAVPG 62
Y YG LK + PIP+P ++++L+++ AA++NP D K ++RP+ P FP +PG
Sbjct: 126 YNSYGGGPSALKQVEVPIPAPSKDEVLIKLEAASINPFDWKVQIGKLRPLLPRKFPYIPG 305
Query: 63 CDMAGVVIGKGVNVKKFDIGDEVYGNIQDFN 93
D+AG V+ G VKKF GD+V G F+
Sbjct: 306 TDIAGEVVEIGQGVKKFKPGDKVVGMANPFS 398
>BP038466
Length = 442
Score = 62.8 bits (151), Expect = 8e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -2
Query: 253 LTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAWGKVVVTCFP 309
LT G +LEKL+PYLE G++K ++DPK + F ++AF Y+ T RA G+VV+ P
Sbjct: 423 LTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSYLNTSRATGEVVIYPIP 253
>AV767419
Length = 323
Score = 61.2 bits (147), Expect = 2e-10
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -3
Query: 249 VYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAWGKVVVTCF 308
++ LT G +L KL P+LE G++K ++DPK + F ++AF Y+ET RA GKVV+
Sbjct: 318 IFFVLTSNGAVL*KLNPFLESGKVKPILDPKSPFPFSQTVEAFSYLETDRATGKVVIHPI 139
Query: 309 P 309
P
Sbjct: 138 P 136
>TC8042 homologue to UP|P93619 (P93619) Probable NADP-dependent
oxidoreductase TED2 , complete
Length = 1244
Score = 59.7 bits (143), Expect = 7e-10
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 14/235 (5%)
Frame = +2
Query: 1 MQKAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSDFPAV 60
M KA E G ++LK D I P EN++ V+ A +N ID R S P
Sbjct: 116 MVKAIRVHELGGPQILKWEDVEIGDPKENEVRVKNKAIGVNFIDVYFRKGVYKASTSPFT 295
Query: 61 PGCDMAGVVIGKGVNVKKFDIGDEV-YGNIQDFNSMEKPKQLGTLAQFIVVEENLVARKP 119
PG + GVV G +GD V Y + +G+ + ++ V P
Sbjct: 296 PGMEAVGVVTAVGGGPTGVQVGDLVGYAG----------QPIGSYVEEQILHAGKVVPIP 445
Query: 120 KRLSFEEAASLPLAVQTA----IEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGA 175
+ AAS+ L TA FK ++G T+ V AGGVG+L+ Q A + GA
Sbjct: 446 SSIDPSVAASVMLKGMTAQFLLRRCFKV---ERGHTILVHAAAGGVGSLLCQWANAL-GA 613
Query: 176 SYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEK---------FDFIYDTVG 221
+ + + + K K+ G V+ Y K ED + + +YD+VG
Sbjct: 614 TVIGTVSNEEKAAQAKEDGCHHVIIY---KEEDFVARVNEITSGNGVEVVYDSVG 769
>TC8891 similar to GB|AAP68279.1|31711846|BT008840 At1g72680 {Arabidopsis
thaliana;} , complete
Length = 1636
Score = 53.9 bits (128), Expect = 4e-08
Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Frame = +1
Query: 55 SDFPAVPGCDMAGVVIGKGVNVKKFDIGDE------------------------VYGNIQ 90
S +P VPG ++AG+V G NV F +GD V G++
Sbjct: 274 SVYPCVPGHEIAGIVTKVGSNVHGFSVGDHVGVGTYVNSCRDCEFCDDGLEHHCVKGSVF 453
Query: 91 DFNSMEKPKQL--GTLAQFIVVEENLVARKPKRLSFEEAASLPLAVQTAIEGFKTGDFKK 148
FN ++ + G ++FIVV E PK AA L A T +
Sbjct: 454 TFNGVDHDGTITKGGYSKFIVVHERYCFLIPKSYPLASAAPLLCAGITVYSPMMRHKMNQ 633
Query: 149 GETMFVVGGAGGVGTLVLQLAKLMFGASYVVSSCS-TPKLKFVKQFGADK-VVDYTKTKY 206
V G GG+G + ++ K FG + V S S + K + + GAD+ VV + +
Sbjct: 634 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVFSTSISKKEEALSLLGADRFVVSSDQEEM 810
Query: 207 EDIEEKFDFIYDT 219
+ + DFI DT
Sbjct: 811 RALAKSLDFIVDT 849
>TC12763 similar to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol dehydrogenase
(CAD) , partial (62%)
Length = 809
Score = 53.9 bits (128), Expect = 4e-08
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Frame = +2
Query: 66 AGVVIG--KGVNVKKFDIGDEVYGNIQDFNSME---KPKQLGTLAQFIVVEENLVARKPK 120
AG+++G K + DI I ++N + KP Q G A+ I+VE+ V + P+
Sbjct: 140 AGLLVGCCKKCTACQSDIEQYCKKKIWNYNDVYVDGKPTQ-GGFAETIIVEQKFVVKIPE 316
Query: 121 RLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVVS 180
++ E+ A L A T K+ + G GGVG + + +AK M V+S
Sbjct: 317 GMAPEQVAPLLCAAVTVYSPLSHFGLKESGLRGGILGLGGVGHMGVIIAKAMGHHVTVIS 496
Query: 181 SCSTPKLKFVKQFGADK-VVDYTKTKYEDIEEKFDFIYDTV 220
S K + ++ GAD +V T ++ + D+I DTV
Sbjct: 497 SSDRKKKEAIEDLGADAYLVSSDTTSMQEAADSLDYIIDTV 619
>TC17336 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial (14%)
Length = 410
Score = 52.0 bits (123), Expect = 1e-07
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 3 KAWFYEEYGPKEVLKL-GDFPIPSPLENQLLVQVYAAALNPIDSKRR 48
KAW Y EYG +VLK + +P E+Q+LV+V AAALNP+D+KRR
Sbjct: 259 KAWVYGEYGGVDVLKFDSNVAVPDLKEDQVLVRVVAAALNPVDAKRR 399
>TC16542 similar to UP|Q93X81 (Q93X81) Sorbitol dehydrogenase, partial (60%)
Length = 724
Score = 45.1 bits (105), Expect = 2e-05
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Frame = +1
Query: 16 LKLGDFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSDF----PAVPGCDMAGVVIG 71
LK+ F +P+ + + V++ A + D ++ + +DF P V G + AG++
Sbjct: 124 LKIQPFKLPTLGPHDVRVRMKAVGICGSDV-HYLKKLRCADFIVKEPMVIGHECAGIIEA 300
Query: 72 KGVNVKKFDIGDEV------------------YGNIQDFNSMEKPKQLGTLAQFIVVEEN 113
G VK GD V Y D P G+LA IV +
Sbjct: 301 VGAEVKSLVPGDRVAIEPGISCWRCDHCKLGSYNLCPDMKFFATPPVHGSLANQIVHPAD 480
Query: 114 LVARKPKRLSFEEAASL-PLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLM 172
L + P +S EE A PL+V + + + ET ++ GAG +G LV LA
Sbjct: 481 LCFKLPDNVSLEEGAMCEPLSV--GVHACRRANIGP-ETNVLIMGAGPIG-LVTMLAARA 648
Query: 173 FGA-SYVVSSCSTPKLKFVKQFGAD 196
FGA V+ +L K GAD
Sbjct: 649 FGAPRIVIVDVDDHRLSVAKTLGAD 723
>AV771699
Length = 452
Score = 43.5 bits (101), Expect = 5e-05
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Frame = +1
Query: 3 KAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVYAAALNPI------DSKRRMRPIFPSD 56
+AW Y EYG E + D +P+P + +P+ ++ ++ F
Sbjct: 58 RAWVYSEYGNIEHILKFDPNVPTPDIKEKPGAHQGCGCSPLILWITREASGVVQGSFEFS 237
Query: 57 FPAV-PGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLV 115
F A+ G D+AGVV+ G VKK G + + PK G L ++ EE ++
Sbjct: 238 FSALGQGYDVAGVVVRVGSQVKKV-*GLGMRSMVI*MRRASDPKSSGYLVEYTAAEEKVL 414
Query: 116 ARKPKRLSFEEA 127
A KP L+ EA
Sbjct: 415 AHKPSNLNVMEA 450
>BP038362
Length = 274
Score = 43.1 bits (100), Expect = 7e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 261 EKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETG 297
EKLRP+LE G++K ++DP+ + F ++AF Y+ G
Sbjct: 272 EKLRPFLESGQVKPILDPQSPFPFSPTVEAFSYLGHG 162
>TC10894 weakly similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1
(Fragment), partial (41%)
Length = 614
Score = 41.6 bits (96), Expect = 2e-04
Identities = 38/138 (27%), Positives = 58/138 (41%), Gaps = 19/138 (13%)
Frame = +3
Query: 187 LKFVKQFGADKVVDYTKTKYEDIEEKFDFIYDTVGDCKKSF------VVAKKDGAIVDIT 240
+ FVK GAD+V+DY + + YD V C + + G +VD+T
Sbjct: 15 IDFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVVVDLT 194
Query: 241 -------------WPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENV 287
S ++ V +TV E LE L ++ G+LK +ID K +
Sbjct: 195 PHGSSFMTFALKKLTFSKKQLVPFFVTVKREGLEYLTQLVKDGKLKTIIDSK--FPLSQA 368
Query: 288 IDAFGYIETGRAWGKVVV 305
DA+ G A GK++V
Sbjct: 369 EDAWAKSIDGHATGKIIV 422
>TC13188 similar to GB|AAL24178.1|16604344|AY058070 AT5g16970/F2K13_120
{Arabidopsis thaliana;} , partial (46%)
Length = 583
Score = 41.2 bits (95), Expect = 3e-04
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Frame = +2
Query: 130 LPLAVQTAIEG----------FKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVV 179
+PL+ T I G F+ G KKGE +FV +G VG LV Q AKL YVV
Sbjct: 353 VPLSYYTGILGMPGMTAYTGFFEVGSAKKGENVFVSAASGAVGQLVGQFAKL--NGCYVV 526
Query: 180 SSC-STPKLKFVKQ-FGAD 196
S S K++ +K+ FG D
Sbjct: 527 GSAGSKEKVELLKEKFGYD 583
>BF177485
Length = 334
Score = 38.9 bits (89), Expect = 0.001
Identities = 25/72 (34%), Positives = 36/72 (49%), Gaps = 1/72 (1%)
Frame = +1
Query: 3 KAWFYEEYGPKEVLKLG-DFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSDFPAVP 61
KA E+ G EVL+ D P+P P E ++LV+ +N ID+ R P FP +
Sbjct: 82 KAVLIEKTGGTEVLQYKTDVPVPEPKEGEVLVKNEFIGINYIDTYFRSGVYKPPQFPYIL 261
Query: 62 GCDMAGVVIGKG 73
G + AG + G
Sbjct: 262 GREGAGTIASVG 297
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.139 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,068,348
Number of Sequences: 28460
Number of extensions: 59749
Number of successful extensions: 307
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of query: 340
length of database: 4,897,600
effective HSP length: 91
effective length of query: 249
effective length of database: 2,307,740
effective search space: 574627260
effective search space used: 574627260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC146342.2