TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146333.5 + phase: 0 
         (501 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spi...    31  0.54
TC17470 similar to UP|Q9SN46 (Q9SN46) Extensin-like protein, par...    29  2.0
TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activati...    29  2.0
TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha galactosyltra...    28  2.7
BP085408                                                               27  5.9
BI418387                                                               27  5.9
TC8057 weakly similar to UP|Q8W228 (Q8W228) Cytochrome P450, par...    27  5.9
TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like...    27  5.9
AV414175                                                               27  7.8
TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting re...    27  7.8

>TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spinacia
           oleracea;}, partial (43%)
          Length = 1157

 Score = 30.8 bits (68), Expect = 0.54
 Identities = 16/45 (35%), Positives = 28/45 (61%), Gaps = 3/45 (6%)
 Frame = +3

Query: 435 DGKDEQKTHENLMLKKELVKVRRELEEK---DELLMQDSKRARGR 476
           +GK+E +  + + +KKELVKV +E  E+    +L+    ++A GR
Sbjct: 381 EGKEETEEEKRMRVKKELVKVAKEQAERRATAQLMFDLGQKAYGR 515


>TC17470 similar to UP|Q9SN46 (Q9SN46) Extensin-like protein, partial (13%)
          Length = 649

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +1

Query: 311 FPMKTKPINLATSPEFFYYSNAPTGQREAFTRAWSKVRWKSVKHLGV 357
           FP++++     + P+  YY N    +R+  T     VRW   + +GV
Sbjct: 91  FPLRSQVGRKISIPQICYYLNGKRERRKLVTHQMPHVRWGRKQRVGV 231


>TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activation domain
            interacting protein PTIP, partial (3%)
          Length = 1502

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = -1

Query: 434  LDGKDEQKTHENLMLKKELVKVRRELEEK 462
            L  KDEQ TH+NL   K +  + RE+  K
Sbjct: 1193 LSPKDEQTTHQNLNFSKHVSHLAREITTK 1107


>TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha
           galactosyltransferase-like protein
           (AT3g62720/F26K9_150), partial (12%)
          Length = 458

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 20/68 (29%), Positives = 30/68 (43%), Gaps = 8/68 (11%)
 Frame = +1

Query: 364 EAYTQWVINRAEE--------IGLPYPAMRHVAASAPSIPLPLPPTTQEMYQEHLAMESR 415
           E +T+    RAE+        I  P PA   +A   P +PLPLP      ++ H +   R
Sbjct: 169 ERWTEVWCGRAEQQNAGTVLRISPPPPAAARLAPRLPHLPLPLP------HRHHASRHHR 330

Query: 416 EKQMWKAR 423
            +Q+   R
Sbjct: 331 SRQVRNPR 354


>BP085408 
          Length = 350

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (49%)
 Frame = +3

Query: 63  ILRTNVEEKLVHTLVQFYDPSFRCFTFPDFQLVPTLEAYSHLLDSPIA 110
           I++TN ++KL+H   +   P          +++PT EA  H    P+A
Sbjct: 117 IIKTNGQDKLIHNTRELCAPHLL*LPPHHLRVMPTWEARCHAGVGPVA 260


>BI418387 
          Length = 479

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 11/28 (39%), Positives = 14/28 (49%)
 Frame = +3

Query: 382 PAMRHVAASAPSIPLPLPPTTQEMYQEH 409
           P   H  +S   +PLPLP T   M + H
Sbjct: 63  PLQPHTCSSHTLLPLPLPSTLHSMVETH 146


>TC8057 weakly similar to UP|Q8W228 (Q8W228) Cytochrome P450, partial (29%)
          Length = 1148

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 40/172 (23%), Positives = 63/172 (36%), Gaps = 11/172 (6%)
 Frame = +2

Query: 93  QLVPTLEAYSHLLDSPIAEKTPFTGPGASLTPLVIAKDLYLKTS-------DVSKHLTTK 145
           Q++   EA S L D    +   FT    S       K +  KT+        +   L T 
Sbjct: 104 QIIKDHEAPSRLSDQKNGQSIDFTDTLLSHMKQSKDKHIINKTNLKAILLDIIIGSLDTT 283

Query: 146 SHIRGFTSKYLLEQANLETTCQDALEAILALLVYGLIL----FPNLDNFVDMNAIEIFHS 201
                +    LL      T  QD L+ ++ +   G ++     P L  +++M   E F  
Sbjct: 284 IMTTDWAMSELLRHPKAMTKLQDELKNVVGM---GRVVEEDDIPKLP-YLNMVVKETFRI 451

Query: 202 RNPVPTLLADMYHAIHDRTLKGRVYILCCVPLLYRWFISHLPSSFHDNSEDW 253
             P P L+      + D T+ G         L+  W I   P  + DN+ED+
Sbjct: 452 HPPAPLLVPR--ECLEDITINGYFIAKKSRVLVNSWTIGRDPKIWSDNAEDF 601


>TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
           (52%)
          Length = 765

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 389 ASAPSIPLPLPP---TTQEMYQEHLAMESREKQMWKARYNEAENLIMTLDGK 437
           ASAPS PLPL P   T + M    + M S+ +   + +     NLI +L GK
Sbjct: 117 ASAPSFPLPLTPIRSTRRAMMI*KIFMRSK*RWKNQRKMMR*LNLISSLKGK 272


>AV414175 
          Length = 226

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 229 CCVPLLYRWFISHLPSSFHDNSEDW 253
           CC P    W  +H     H NS+DW
Sbjct: 108 CCQPFWELWVWTHGRFHSHGNSQDW 182


>TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting receptor-like
           protein, partial (16%)
          Length = 687

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = -2

Query: 378 GLPYPAMRHVAASAPSIPLPLPPTTQEMY 406
           G P+P++R+ A    + P P P T Q  Y
Sbjct: 209 GCPFPSIRYSAKYVKTRPTP*PSTVQRKY 123


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.321    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,874,660
Number of Sequences: 28460
Number of extensions: 125317
Number of successful extensions: 759
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of query: 501
length of database: 4,897,600
effective HSP length: 94
effective length of query: 407
effective length of database: 2,222,360
effective search space: 904500520
effective search space used: 904500520
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)