BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146332.11 - phase: 0
(366 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC19319 similar to UP|Q9SJF3 (Q9SJF3) T27G7.7, partial (10%) 211 1e-55
AV421922 122 7e-29
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 63 7e-11
TC8786 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, pa... 49 1e-06
TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.3... 48 2e-06
TC7849 similar to GB|AAN18126.1|23308313|BT000557 At2g10940/F15K... 47 7e-06
TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,... 46 9e-06
BP072816 46 9e-06
AV410336 46 9e-06
TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall prot... 44 3e-05
TC15802 similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cucumber... 44 3e-05
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 44 3e-05
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 44 4e-05
AV409412 44 4e-05
BI418540 43 7e-05
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 43 7e-05
AV427333 43 9e-05
TC16761 similar to GB|AAL32703.1|17065098|AY062625 nucleotide su... 43 9e-05
BP044109 42 2e-04
AV419448 42 2e-04
>TC19319 similar to UP|Q9SJF3 (Q9SJF3) T27G7.7, partial (10%)
Length = 475
Score = 211 bits (538), Expect = 1e-55
Identities = 113/155 (72%), Positives = 124/155 (79%), Gaps = 2/155 (1%)
Frame = +1
Query: 154 EELEAVPTMAVMDGPLEPSSSITSNVADVPDDPSFINFFSAAMGIGNTSNAPITGQPYQS 213
EELEAVPTMAVMDGPLEPSSS SNVADV DDPSF+NFFSAA+GIGNTSNAPITGQPYQS
Sbjct: 4 EELEAVPTMAVMDGPLEPSSSTASNVADVADDPSFVNFFSAALGIGNTSNAPITGQPYQS 183
Query: 214 SATISSS-GPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKP-SFF 271
SATI + P HAATP LPTLQIPSL STP PQHDA ES +SSS+ T LV P SF
Sbjct: 184 SATIPTPLVPAHAATPT--LPTLQIPSLSASTPLIPQHDASESFSSSSRTTKLVNPSSFV 357
Query: 272 VPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYG 306
VPP +S+ +++P VSSS PTAPPLHP + R YG
Sbjct: 358 VPPPTSSPVIIPLVSSSTPTAPPLHPAASHPRLYG 462
>AV421922
Length = 474
Score = 122 bits (307), Expect = 7e-29
Identities = 72/158 (45%), Positives = 97/158 (60%), Gaps = 1/158 (0%)
Frame = +1
Query: 208 GQPYQSSATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVK 267
G+PY S AT++S+ P TP P++QIPS + E+IN +Q T LV
Sbjct: 25 GRPYHS-ATVTSTVPNGLFTPA---PSVQIPS----ASHLASSASLETINIGNQVTKLVN 180
Query: 268 PSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSS 327
PS F+ SS++++ + SS+P +H + YGTP+ Q FPPP PP SL P+ S
Sbjct: 181 PSTFLASNSSSSLISSRILSSVPPNAAVHHPLILPNQYGTPVFQHFPPPNPPLSLNPIPS 360
Query: 328 PLPN-PAISREKVRDALLVLVQDNQFIDMVYKALLNAH 364
P PN P ISR+KVRDALL LVQD+QFIDMV++ LL +
Sbjct: 361 PTPNRPVISRDKVRDALLSLVQDDQFIDMVFQKLLKVN 474
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 63.2 bits (152), Expect = 7e-11
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +2
Query: 215 ATISSSGPTHAAT--PVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFV 272
A++ + P+++ T P P PT P S+P P +P + SS + P+
Sbjct: 170 ASVGAQSPSNSPTTSPAPPTPTTPQPPAAQSSP-PPAQSSPPPVQSSPPPASTPPPAQSS 346
Query: 273 PPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPP-PTPPPSLAPVSSPLPN 331
PP S+ PPV S+ P AP P P+ P P PP TPPP+L PV + P
Sbjct: 347 PPPVSSP---PPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPPPALTPVPATSPA 517
Query: 332 PAISREK 338
PA ++ K
Sbjct: 518 PAPAKVK 538
>TC8786 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, partial
(33%)
Length = 594
Score = 48.9 bits (115), Expect = 1e-06
Identities = 39/115 (33%), Positives = 49/115 (41%), Gaps = 3/115 (2%)
Frame = +1
Query: 220 SGPTHAATPVVPLPTLQIP--SLPTSTP-FTPQHDAPESINSSSQATNLVKPSFFVPPLS 276
S THA P P + P S P +TP TP +P +I+ S A + KP PL+
Sbjct: 97 SSATHANPPPPPSTAARTPPSSAPPATPKSTPPTSSPPAIHVSLSAKSASKP-----PLA 261
Query: 277 SAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPN 331
S A MPP S+S T PT + P L PP P S S + N
Sbjct: 262 SHARPMPPTSASPATMTSTPPTPSPPATNVPPSLPSSTPPPPTSSTTNTCSQMQN 426
Score = 30.0 bits (66), Expect = 0.63
Identities = 36/132 (27%), Positives = 45/132 (33%), Gaps = 7/132 (5%)
Frame = +1
Query: 210 PYQSSATISSSGPTHAATPVVPLPTLQIPSL-------PTSTPFTPQHDAPESINSSSQA 262
P ++ T SS P ATP PT P++ S P H P S+S A
Sbjct: 130 PSTAARTPPSSAPP--ATPKSTPPTSSPPAIHVSLSAKSASKPPLASHARPMPPTSASPA 303
Query: 263 TNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSL 322
T P PP ++ P + SS P P T T + Q L
Sbjct: 304 TMTSTPPTPSPPATNVP---PSLPSSTPPPPTSSTTNTCSQMQNQNQKQKQQKKRKRLKL 474
Query: 323 APVSSPLPNPAI 334
P S LP I
Sbjct: 475 LPGCSRLPRKQI 510
Score = 26.9 bits (58), Expect = 5.4
Identities = 24/84 (28%), Positives = 33/84 (38%), Gaps = 11/84 (13%)
Frame = +1
Query: 260 SQATNLVKPSFFVPPLSSAAMMMP-------PVSSSIPTAPPLHPTGTVQRPYGTPMLQP 312
S AT+ P PP S+AA P P S+ ++PP + P L
Sbjct: 97 SSATHANPP----PPPSTAARTPPSSAPPATPKSTPPTSSPPAIHVSLSAKSASKPPLAS 264
Query: 313 FPPPTPPPSLAPV----SSPLPNP 332
P PP S +P + P P+P
Sbjct: 265 HARPMPPTSASPATMTSTPPTPSP 336
>TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.33), partial
(12%)
Length = 565
Score = 48.1 bits (113), Expect = 2e-06
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +2
Query: 222 PTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESIN-SSSQATNLVKPSFFVPPLSSAAM 280
P ++ P P Q P T Q P S S+++A++L P+ PP SS+A
Sbjct: 149 PLFSSPPFSFSPHSQFPETHTVHDLELQWLPPASTTPSATRASSLGIPN---PPTSSSAS 319
Query: 281 MMP----PVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAI 334
P P +SS PT H T P+ P QPF PP PPP ++P +P +
Sbjct: 320 KTPSPCSPPTSSSPTGSSSHSTSNP--PHPPPQQQPFSPPPPPPPPPSPTAPSSHPRL 487
>TC7849 similar to GB|AAN18126.1|23308313|BT000557 At2g10940/F15K19.1
{Arabidopsis thaliana;}, partial (55%)
Length = 1157
Score = 46.6 bits (109), Expect = 7e-06
Identities = 30/105 (28%), Positives = 42/105 (39%), Gaps = 3/105 (2%)
Frame = +2
Query: 231 PLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIP 290
P+P PS P P P + +VKP +PP++ + +PP+
Sbjct: 176 PVPKKHKPSKKPGKPVKPPGIVPPIVKPPGIVPPIVKPPVILPPVTVPPVTVPPI----- 340
Query: 291 TAPPLHPTGTVQRPYGTPMLQPFP---PPTPPPSLAPVSSPLPNP 332
T PP+ P TP+L P P PP+ P P S P P
Sbjct: 341 TVPPVVKPTLPPIPGVTPILPPVPVLNPPSTPTPTTPGSGSCPPP 475
>TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,
chloroplast precursor (EF-Tu), partial (58%)
Length = 1146
Score = 46.2 bits (108), Expect = 9e-06
Identities = 36/130 (27%), Positives = 57/130 (43%)
Frame = +2
Query: 216 TISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPL 275
T++ P ++ P P PT PS+ PQ + N+ + P PL
Sbjct: 164 TLTPLPPASSSDPNYPPPTSPPPSI------LPQSSSTRRRNNPPPPSTAAPPPSPSAPL 325
Query: 276 SSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAIS 335
++++ P+S+S P+A T T +P P PPP+P PSL ++P N S
Sbjct: 326 AASSSARNPMSTSAPSA-----TSTTAKP-------PSPPPSPWPSLPSETAPPRNTTKS 469
Query: 336 REKVRDALLV 345
++ AL V
Sbjct: 470 TPPLKSALAV 499
>BP072816
Length = 492
Score = 46.2 bits (108), Expect = 9e-06
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = +1
Query: 203 NAPITGQPYQS-SATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQ 261
N P++ QP S S++ SSS P + + P+ S P++T P + N+SS+
Sbjct: 82 NPPLSHQPCHSPSSSSSSSSPLPSPPTTLHAPSTSPSSAPSATAAPPPSTPTPAANTSSK 261
Query: 262 ATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPS 321
+ KP+ P +S+ + PP P PP +P+ T P P T P
Sbjct: 262 PSTSSKPTTSAAPPASSLLSTPPK----PAGPPSNPSST---------NSPAPASTSAPH 402
Query: 322 LAPVSSPLPNPA 333
A + P A
Sbjct: 403 AASKAHGSPKVA 438
>AV410336
Length = 358
Score = 46.2 bits (108), Expect = 9e-06
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +1
Query: 204 APITGQPYQSSATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQAT 263
+P P +++T S++ P HA P P P P+S+ TP +P S +SS AT
Sbjct: 10 SPHPSPPTPTTSTSSTAPPPHAPPPPTPNP-----KSPSSSSPTPTSPSPHSGRNSSPAT 174
Query: 264 NLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPP--PTPPPS 321
S P PP SS+P A + ++P P PP +PPPS
Sbjct: 175 TTFTTSTSTPT--------PPPPSSLPAASSTAASLLPKKPTAPPQHSSPPPAASSPPPS 330
Score = 32.3 bits (72), Expect = 0.13
Identities = 25/79 (31%), Positives = 34/79 (42%), Gaps = 1/79 (1%)
Frame = +1
Query: 250 HDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPM 309
H +P + +S+ +T P PP + P SS PT+P H +G P T
Sbjct: 16 HPSPPTPTTSTSST---APPPHAPPPPTPNPKSPSSSSPTPTSPSPH-SGRNSSPATTTF 183
Query: 310 LQPFPPPT-PPPSLAPVSS 327
PT PPPS P +S
Sbjct: 184 TTSTSTPTPPPPSSLPAAS 240
Score = 30.4 bits (67), Expect = 0.48
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 290 PTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLP 330
P+ P PT T P PPPTP P SSP P
Sbjct: 7 PSPHPSPPTPTTSTSSTAPPPHAPPPPTPNPKSPSSSSPTP 129
>TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
partial (60%)
Length = 913
Score = 44.3 bits (103), Expect = 3e-05
Identities = 38/141 (26%), Positives = 56/141 (38%), Gaps = 11/141 (7%)
Frame = +3
Query: 205 PITGQPYQSSATISSSGPTHAATPVVPLPTL-QIPSLPTSTPFTPQHDAPESINSSSQAT 263
PI PY + P PVV P + + P +P + P+ P+
Sbjct: 480 PIVKPPYVPKPPVVKPPPYVPKPPVVSPPYVPKPPVVPVTPPYVPKPPVVPVTPPYVPKP 659
Query: 264 NLVKPSFFVPP--LSSAAMMMPPV---SSSIPTAPPLHPTGTVQRPY-GTPMLQPFPP-- 315
+VKP PP + ++ PP+ +PT P + P PY P + P PP
Sbjct: 660 PIVKPPIVYPPPYVPKPPIVKPPIVYPPPYVPTPPIVKPPIVYPPPYVPLPPVVPSPPIV 839
Query: 316 --PTPPPSLAPVSSPLPNPAI 334
PTP P + V+ P P P +
Sbjct: 840 TPPTPTPPI--VTPPTPTPPV 896
Score = 36.2 bits (82), Expect = 0.009
Identities = 33/108 (30%), Positives = 37/108 (33%), Gaps = 3/108 (2%)
Frame = +3
Query: 226 ATPVVPLPTLQIPSLPTSTPFT--PQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMP 283
A P P P PS P P P H P Q +VKP PP P
Sbjct: 120 ACPYCPYPA---PSKPPKHPIVKPPVHKPP-------QHPPIVKPPVHKPP------QHP 251
Query: 284 PVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTP-PPSLAPVSSPLP 330
P+ PP +P P P P PP P PP + P P P
Sbjct: 252 PIVKPPVHKPPKYPPSHGPEPCPPPKPSPKPPHYPKPPVVKPPHVPKP 395
Score = 35.4 bits (80), Expect = 0.015
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Frame = +3
Query: 205 PITGQPYQSSATISSSGPTHAATP-VVPLPTLQIPSLPTSTP---FTPQHDAPESINSSS 260
P+ PY + P + P VVP+ +P P P + P + I
Sbjct: 549 PVVSPPYVPKPPVVPVTPPYVPKPPVVPVTPPYVPKPPIVKPPIVYPPPYVPKPPIVKPP 728
Query: 261 QATNLVKPSFFVP--PLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTP 318
+V P +VP P+ ++ PP +P P P T P TP + P PTP
Sbjct: 729 ----IVYPPPYVPTPPIVKPPIVYPPPYVPLPPVVPSPPIVTPPTP--TPPIVTPPTPTP 890
Query: 319 PPSLAP 324
P P
Sbjct: 891 PVVTPP 908
Score = 31.2 bits (69), Expect = 0.28
Identities = 22/71 (30%), Positives = 28/71 (38%), Gaps = 2/71 (2%)
Frame = +3
Query: 265 LVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQP--FPPPTPPPSL 322
+VKP PP PP+ PP HP P+++P PP PPS
Sbjct: 171 IVKPPVHKPP------QHPPIVKPPVHKPPQHP----------PIVKPPVHKPPKYPPSH 302
Query: 323 APVSSPLPNPA 333
P P P P+
Sbjct: 303 GPEPCPPPKPS 335
>TC15802 similar to UP|Q9XIV1 (Q9XIV1) mRNA expressed in cucumber hypocotyls
(Arabinogalactan protein), partial (26%)
Length = 795
Score = 44.3 bits (103), Expect = 3e-05
Identities = 32/120 (26%), Positives = 48/120 (39%)
Frame = +2
Query: 215 ATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPP 274
A + PT A T P+ + P STP AP + + T PS P
Sbjct: 92 AGVGGQSPTAAPTTSPATPSA---TTPVSTPV-----APVASPKPAATTPAASPSTATAP 247
Query: 275 LSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAI 334
+ + PV+S P A P+ P +P + PP P P+ PV++P+ P +
Sbjct: 248 APATTTPVTPVTSPPPAAVPVASPPPAAVPVSSPPAKS--PPAPAPTAVPVAAPVTTPEV 421
Score = 43.9 bits (102), Expect = 4e-05
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Frame = +2
Query: 197 GIGNTSNAPITGQPYQSSATISSSGPTHAATPVVPLPTLQ-IPSLPTSTPFTPQHDAPES 255
G+G S T P S AT S++ P +TPV P+ + + + P ++P T AP +
Sbjct: 95 GVGGQSP---TAAPTTSPATPSATTPV--STPVAPVASPKPAATTPAASPSTATAPAPAT 259
Query: 256 INSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPP 315
+ T+ PP ++ + PP +++P + P P +P P P
Sbjct: 260 TTPVTPVTS--------PPPAAVPVASPP-PAAVPVSSP---------PAKSP---PAPA 376
Query: 316 PTPPPSLAPVSSP-LPNPAISREK 338
PT P APV++P +P PA S+ K
Sbjct: 377 PTAVPVAAPVTTPEVPAPAPSKTK 448
Score = 27.3 bits (59), Expect = 4.1
Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Frame = +2
Query: 160 PTMAVMDGPLEPSSS--ITSNVADVPDDPSFINFFSAAMGIGNTSNAPITGQPYQS---- 213
PT A P PS++ +++ VA V P AA T+ AP T P
Sbjct: 113 PTAAPTTSPATPSATTPVSTPVAPVAS-PKPAATTPAASPSTATAPAPATTTPVTPVTSP 289
Query: 214 -SATISSSGPTHAATPV---------VPLPTLQIPSLPTSTPFTPQHDAPESINSSSQAT 263
A + + P AA PV P PT + P +TP P ++ ++ A
Sbjct: 290 PPAAVPVASPPPAAVPVSSPPAKSPPAPAPTAVPVAAPVTTPEVPAPAPSKTKKDAAPAP 469
Query: 264 NLVKP 268
+ V P
Sbjct: 470 SPVVP 484
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 44.3 bits (103), Expect = 3e-05
Identities = 33/123 (26%), Positives = 56/123 (44%), Gaps = 3/123 (2%)
Frame = +1
Query: 203 NAPITGQPYQS---SATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSS 259
+ P+ QP Q+ +SSS P+ +++P P+P + PT+ P P +P +
Sbjct: 97 SVPLRRQPTQTP*GQPWLSSSPPSSSSSPA-PVPESPTTNSPTTAPPPPPASSPPPSPTH 273
Query: 260 SQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPP 319
S +++ PS P +++ P SSS T+P + T + P P P+ P
Sbjct: 274 SPSSS-PSPSAPTSPAATSTPPSPSASSSAVTSPSSAVSSTSSLSFSDPSSPPCSSPSSP 450
Query: 320 PSL 322
SL
Sbjct: 451 DSL 459
Score = 35.4 bits (80), Expect = 0.015
Identities = 25/63 (39%), Positives = 29/63 (45%)
Frame = +1
Query: 273 PPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNP 332
P LSS+ PP SSS P P PT P P P P P P+ +P SSP P+
Sbjct: 142 PWLSSS----PPSSSSSPAPVPESPT--TNSPTTAPPPPPASSPPPSPTHSPSSSPSPSA 303
Query: 333 AIS 335
S
Sbjct: 304 PTS 312
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 43.9 bits (102), Expect = 4e-05
Identities = 41/127 (32%), Positives = 51/127 (39%), Gaps = 6/127 (4%)
Frame = +1
Query: 213 SSATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAP------ESINSSSQATNLV 266
SS + +SSGPT T P S TP TP +P S N +S +
Sbjct: 190 SSGSTASSGPTQNQTGS-P*KGSTTSSSGAPTPPTPHAASPGASACRSSQNQTSPPETTL 366
Query: 267 KPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVS 326
P P +SA+ P P+ PP P + P P P PPPT PS AP
Sbjct: 367 TPPTSSAPATSASSSPPHTLPKSPSPPP--PPSPLSPP---PPASPSPPPTASPS-APSP 528
Query: 327 SPLPNPA 333
S P P+
Sbjct: 529 SKSPTPS 549
Score = 43.5 bits (101), Expect = 6e-05
Identities = 43/130 (33%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = +1
Query: 199 GNTSNAPITGQPYQSSATISSSGPT----HAATP-VVPLPTLQIPSLPTSTPFTPQHDAP 253
G T N TG P + S T SS PT HAA+P + Q + P T TP +
Sbjct: 214 GPTQNQ--TGSP*KGSTTSSSGAPTPPTPHAASPGASACRSSQNQTSPPETTLTPPTSSA 387
Query: 254 ESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIP-TAPPLHPTGTVQRPYGTPMLQP 312
+ ++SS + + S PP S PP S S P TA P P +P P
Sbjct: 388 PATSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSPPPTASPSAP---------SPSKSP 540
Query: 313 FP-PPTPPPS 321
P P+PP S
Sbjct: 541 TPSKPSPPQS 570
>AV409412
Length = 426
Score = 43.9 bits (102), Expect = 4e-05
Identities = 32/105 (30%), Positives = 46/105 (43%)
Frame = +1
Query: 228 PVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSS 287
P P TL P++P+S P + P ++ S + +L PS P +S+A +
Sbjct: 175 PTNPASTLAPPTIPSSPSLPPSRN-PSLLHHLSPSPSLSLPSPSPSPSTSSA-------T 330
Query: 288 SIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNP 332
S PT PP P + PPP PPPS + S P+P
Sbjct: 331 SPPTPPPSSPPSS-------------PPPPPPPSTSSPPSTTPSP 426
>BI418540
Length = 518
Score = 43.1 bits (100), Expect = 7e-05
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 246 FTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPY 305
F+P + P S+ S ++L PS PPL+ PP S+P PP R
Sbjct: 130 FSP--NPPPSVPSPHSPSSLKNPSSPNPPLTPT----PPPPLSLPIPPPA--ALFTARIG 285
Query: 306 GTPMLQPFPPPTP-PPSLAPVSSPLPNP 332
GTP+ P PPP P PPS P + NP
Sbjct: 286 GTPIHAPPPPPAPSPPSATPAAPHCRNP 369
Score = 30.8 bits (68), Expect = 0.37
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 290 PTAPPLHPTGTVQRPYGTPMLQPFPP--PTPPPSLAPVSSPLPNPA 333
P+ P H +++ P P PP PTPPP P+S P+P PA
Sbjct: 148 PSVPSPHSPSSLKNPSS-----PNPPLTPTPPP---PLSLPIPPPA 261
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 43.1 bits (100), Expect = 7e-05
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Frame = +1
Query: 209 QPYQSSATISSSGPTHAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKP 268
QP + + P+++ P VP P + PS P+TP P++ + +SQ P
Sbjct: 64 QPPHTPIPPKTPSPSYSP-PNVPSPP-KAPSPNNHPPYTPT--PPKTPSPTSQP-----P 216
Query: 269 SFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYG-------TPMLQPFPPPTPPPS 321
+PP + + + PP +PT PP P+ Q PY +P QP PTPP +
Sbjct: 217 YIPLPPKTPSPISQPP---HVPT-PPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNT 384
Query: 322 LAPVSSPLPNP 332
+P+S P P
Sbjct: 385 PSPISQPPYTP 417
Score = 42.7 bits (99), Expect = 9e-05
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Frame = +1
Query: 231 PLPTLQIPSLPT--STPFTPQHDAPES-INSSSQATNLVKPSFFVPPLSSAAMMMPPVSS 287
P P PS+PT TP +P + P + I + + + P+ PP + + PP +
Sbjct: 1 PSPVYTPPSIPTPPKTP-SPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYT- 174
Query: 288 SIPTAPPLHPTGTVQRPY-------GTPMLQPFPPPTPPPSLAPVSSPLPNP 332
PT PP P+ T Q PY +P+ QP PTPP + +P+S P P
Sbjct: 175 --PT-PPKTPSPTSQPPYIPLPPKTPSPISQPPHVPTPPSTPSPISQPPYTP 321
Score = 42.4 bits (98), Expect = 1e-04
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +1
Query: 210 PYQSSATISSSGPTHAATPV-VPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKP 268
P A ++ P + TP P PT Q P +P P++ + SQ ++ P
Sbjct: 127 PSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLP---------PKTPSPISQPPHVPTP 279
Query: 269 SFFVPPLSSAAMMMPPVSSSIPTAPPLH-PTG-TVQRPYGTPMLQPFPPPTPPPSLAPVS 326
P+S P + PT+ P H PT P P P PP TP P+ P
Sbjct: 280 PSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNTPSPISQPPYTPTPPKTPSPTNQPPH 459
Query: 327 SPLP 330
P P
Sbjct: 460 IPSP 471
Score = 40.0 bits (92), Expect = 6e-04
Identities = 45/169 (26%), Positives = 61/169 (35%), Gaps = 12/169 (7%)
Frame = +1
Query: 168 PLEPSSSITS-NVADVPDDPSFINFFSAAMGIGNTSNAPITGQPYQSSATISSSGPTHAA 226
P PS S + NV P PS N + P T P ++ + +S P
Sbjct: 88 PKTPSPSYSPPNVPSPPKAPSPNN------------HPPYTPTPPKTPSP-TSQPPYIPL 228
Query: 227 TPVVPLPTLQIPSLPT---------STPFTPQHDAPESINSSSQATNLVKPSFFVPPLSS 277
P P P Q P +PT P+TP P++ + +SQ + P P+S
Sbjct: 229 PPKTPSPISQPPHVPTPPSTPSPISQPPYTPT--PPKTPSPTSQPPHTPTPPNTPSPISQ 402
Query: 278 AAMMMPPVSSSIPTAPPLHPTG--TVQRPYGTPMLQPFPPPTPPPSLAP 324
P + PT P H P P P PP TP P+ P
Sbjct: 403 PPYTPTPPKTPSPTNQPPHIPSPPNSSSPTSQPPNTPSPPKTPSPTSQP 549
Score = 33.1 bits (74), Expect = 0.075
Identities = 21/48 (43%), Positives = 25/48 (51%)
Frame = +1
Query: 288 SIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAIS 335
SIPT PP P+ Q P+ P PP TP PS +P + P P A S
Sbjct: 25 SIPT-PPKTPSPGNQPPH-----TPIPPKTPSPSYSPPNVPSPPKAPS 150
>AV427333
Length = 387
Score = 42.7 bits (99), Expect = 9e-05
Identities = 38/111 (34%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Frame = +3
Query: 222 PTHAATPVVPLPTLQIPSLPTSTPFTPQH--DAPESINSSSQATNLVKPSFFVPPLSSAA 279
P+H P P PS P + P TP H +P + S PS PP SS
Sbjct: 90 PSHPYNPPTP------PSHPFNPPPTPSHYFKSPPPPSHSFAPPPRGHPS---PPPSS-- 236
Query: 280 MMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLP 330
PP SS P PP P+ P P P TPPP + P PLP
Sbjct: 237 ---PPPPSSHPFTPP--------PPHVRPPPSPHHPITPPPHVRPPPPPLP 356
Score = 27.7 bits (60), Expect = 3.1
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 15/100 (15%)
Frame = +3
Query: 249 QHDAPESINSSSQATNLVKPSFFVP--PLSSAAMMMPPVSSSIPTAPPLHPTGTVQRP-- 304
QH + S S+ + +P+F+ P P + PP S P PP P+ + P
Sbjct: 3 QHQEQDKSRSKSKMAS-TQPNFYFPHFPPPPSHPYNPPTPPSHPFNPPPTPSHYFKSPPP 179
Query: 305 -----YGTPMLQPFPPPTPP------PSLAPVSSPLPNPA 333
P P PPP+ P P P P P+
Sbjct: 180 PSHSFAPPPRGHPSPPPSSPPPPSSHPFTPPPPHVRPPPS 299
>TC16761 similar to GB|AAL32703.1|17065098|AY062625 nucleotide sugar
epimerase-like protein {Arabidopsis thaliana;}, partial
(40%)
Length = 794
Score = 42.7 bits (99), Expect = 9e-05
Identities = 29/95 (30%), Positives = 42/95 (43%), Gaps = 7/95 (7%)
Frame = +1
Query: 255 SINSSSQATNLVKP-SFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPF 313
S+ S++Q+ + + P S PP SS + S+ +PP PT + P +P
Sbjct: 229 SVKSTAQSFSTLPPNSSSAPPSSSHSSSSSSSPSTTLPSPPTPPTTSTPTPTSSPPHSAA 408
Query: 314 PPP------TPPPSLAPVSSPLPNPAISREKVRDA 342
PP TPPP AP + P +PA S A
Sbjct: 409 EPPGRSKSATPPPHAAPTACPSSSPAQSASSAHTA 513
Score = 30.8 bits (68), Expect = 0.37
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Frame = +1
Query: 200 NTSNAPITGQPYQSSATISSSGPTHAATPVVPLPTLQIPSLPTSTP-------------- 245
N+S+AP + SS + SSS P P P PTS+P
Sbjct: 271 NSSSAPPS-----SSHSSSSSSSPSTTLPSPPTPPTTSTPTPTSSPPHSAAEPPGRSKSA 435
Query: 246 FTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPT 291
P H AP + SSS A + P +AA +++S PT
Sbjct: 436 TPPPHAAPTACPSSSPAQSASSAHTAPSP*KNAATAF*ALTTSTPT 573
>BP044109
Length = 497
Score = 42.0 bits (97), Expect = 2e-04
Identities = 41/153 (26%), Positives = 57/153 (36%), Gaps = 2/153 (1%)
Frame = +2
Query: 171 PSSSITSNVADVPDDPSFINFFSAAMGIGNTSNAPITGQPYQSSATISSSGPTHAATPVV 230
P ++ TS S +FF + N T + S+AT S+ T T
Sbjct: 38 PHTATTSLSHSSSTSLSSSHFFPSPPPPPPPPNKNKTTPSHASNATSKSTPRTQTPTTPP 217
Query: 231 PLPTLQIPSLPTSTPFTPQHDAPESINSSSQ--ATNLVKPSFFVPPLSSAAMMMPPVSSS 288
P PT P++ P PE+ +SSS A L P P S+ + PP S+
Sbjct: 218 PSPTSSPKPPPSTFATKPSTSPPETPSSSSHGPAPTLPSPPSSSTPTSTPSPPSPPNGST 397
Query: 289 IPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPS 321
+P+ P PT P M T PS
Sbjct: 398 LPSPPRATPTPAPSLPAARRMTSASLCSTSKPS 496
Score = 35.8 bits (81), Expect = 0.012
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +2
Query: 210 PYQSSATISSSGPTHAAT----PVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNL 265
P+ ++ ++S S T ++ P P P P P TP H + N++S++T
Sbjct: 38 PHTATTSLSHSSSTSLSSSHFFPSPPPP----PPPPNKNKTTPSHAS----NATSKSTPR 193
Query: 266 VKPSFFVPPLSSAAMMMPP--VSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLA 323
+ PP +++ PP ++ T+PP P+ + P T P PP + P+
Sbjct: 194 TQTPTTPPPSPTSSPKPPPSTFATKPSTSPPETPSSSSHGPAPT---LPSPPSSSTPTST 364
Query: 324 PVSSPLPN 331
P PN
Sbjct: 365 PSPPSPPN 388
Score = 27.7 bits (60), Expect = 3.1
Identities = 28/107 (26%), Positives = 38/107 (35%)
Frame = +3
Query: 224 HAATPVVPLPTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMP 283
H P++ TL P P T +H + T +P +P L P
Sbjct: 36 HPTPPLLHFLTLPPPHSPPLTSSLLRH------HHHHHRTRTRQPHHTLPTLPPNQHRAP 197
Query: 284 PVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLP 330
+ P HP+ Q P L P PP PPP +A + P P
Sbjct: 198 KPRLHLRRLLPHHPSLLHQPSPQNPPLLPRKPP-PPPHMARL-QPFP 332
>AV419448
Length = 382
Score = 42.0 bits (97), Expect = 2e-04
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 218 SSSGPTHAATPVVPL-PTLQIPSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPLS 276
S + P+ + P P P+L P L TP +P + S ++ ++ PS PPLS
Sbjct: 20 SPAAPSSSHPPPSPSQPSLPSPPLHPPTPPSPTASSWTSASAPPPSSPTATPSAPTPPLS 199
Query: 277 SAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAISR 336
+A + +SS +P +P+ ++ P P PPP+ P S+ A S
Sbjct: 200 AALSLASTATSSPSPSPISNPSASLP-----------PTPPPPPTKTPSSTSSSPAATSS 346
Query: 337 EKVR 340
R
Sbjct: 347 PAAR 358
Score = 41.2 bits (95), Expect = 3e-04
Identities = 39/129 (30%), Positives = 53/129 (40%), Gaps = 9/129 (6%)
Frame = +2
Query: 204 APITGQPYQSSATIS-SSGPTHAATPVVPLPTLQI--------PSLPTSTPFTPQHDAPE 254
AP + P S + S S P H TP P PT PS PT+TP P
Sbjct: 29 APSSSHPPPSPSQPSLPSPPLHPPTP--PSPTASSWTSASAPPPSSPTATPSAPTPPLSA 202
Query: 255 SINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTGTVQRPYGTPMLQPFP 314
+++ +S AT+ PS P+S+ S+S+P PP PT T +P P
Sbjct: 203 ALSLASTATSSPSPS----PISNP-------SASLPPTPPPPPTKTPSSTSSSPAATSSP 349
Query: 315 PPTPPPSLA 323
P+ A
Sbjct: 350 AARVDPTRA 376
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,448,299
Number of Sequences: 28460
Number of extensions: 131065
Number of successful extensions: 4785
Number of sequences better than 10.0: 753
Number of HSP's better than 10.0 without gapping: 2426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3509
length of query: 366
length of database: 4,897,600
effective HSP length: 92
effective length of query: 274
effective length of database: 2,279,280
effective search space: 624522720
effective search space used: 624522720
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Medicago: description of AC146332.11