BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146331.12 + phase: 0 /pseudo
(1619 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AU089582 37 5e-06
TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pro... 46 5e-05
TC18264 similar to UP|Q9SP93 (Q9SP93) Thiol protease, partial (4%) 45 9e-05
TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich ... 44 2e-04
AV427333 44 2e-04
AV407168 43 4e-04
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 42 8e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 42 8e-04
TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (... 42 8e-04
TC12158 homologue to UP|143A_SOYBN (Q96450) 14-3-3-like protein ... 41 0.001
TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific... 41 0.001
AV408970 41 0.002
BP078507 41 0.002
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 40 0.003
TC8573 similar to UP|Q9SIH5 (Q9SIH5) At2g36090 protein, partial ... 40 0.003
TC8136 similar to GB|AAB60729.1|2160166|F21M12 F21M12.13 {Arabid... 40 0.003
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 40 0.003
BI420016 40 0.004
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 40 0.004
TC7814 similar to UP|Q9LKJ6 (Q9LKJ6) Water-selective transport i... 34 0.21
>AU089582
Length = 383
Score = 36.6 bits (83), Expect(2) = 5e-06
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 1379 CVCLSKVEL-GIVTCL*LSLLITTAITRVLVWHRSKPCMVGGVGLLYAG 1426
C+C+ GI CL* + I AI WH KPCMVG G L G
Sbjct: 226 CLCVXPERXAGISICL*WNSHIIIAIGLAFRWHHLKPCMVGDAGHL*VG 372
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 19/41 (46%), Positives = 23/41 (55%)
Frame = +3
Query: 1341 GKVYRTPWVRS*G*VRLIILKQMVSRRGRFNHWKIC*GCVC 1381
G +++ W * *V L ILK MVS RG F +IC VC
Sbjct: 114 GGLFKLLWELD*K*VPLFILKLMVSPRGLFRS*RICFVLVC 236
>TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(ATAGP4) (AT5G10430/F12B17_220), partial (42%)
Length = 575
Score = 45.8 bits (107), Expect = 5e-05
Identities = 30/71 (42%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHA-PLAPP*RAAPHGRAPASA 577
P P AP PPP PPP + AP P + P A P AP A+P G SA
Sbjct: 189 PPPPPAAAPA----PPPATPPPAATPAPTTTPPAATPAPSASPPAPTPTASPTGAPTPSA 356
Query: 578 PSP*APILSCP 588
SP API S P
Sbjct: 357 SSPPAPIPSGP 389
Score = 34.3 bits (77), Expect = 0.16
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 534 PPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
P P P+ PP PPA + + P A P AP PA+ P+P
Sbjct: 153 PGAAPTQAPTTTPPPPPAAAPAPPPATPPPAATPAPTTTPPAATPAP 293
Score = 32.7 bits (73), Expect = 0.47
Identities = 21/62 (33%), Positives = 25/62 (39%)
Frame = +3
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAP 578
P P++ AP + PP P P S P P A P + P P G PAS P
Sbjct: 234 PPPAATPAPTTT--PPAATPAPSASPPAPTPTASPTGAPTPSASSPPAPIPSG--PASGP 401
Query: 579 SP 580
P
Sbjct: 402 GP 407
>TC18264 similar to UP|Q9SP93 (Q9SP93) Thiol protease, partial (4%)
Length = 570
Score = 45.1 bits (105), Expect = 9e-05
Identities = 26/69 (37%), Positives = 36/69 (51%)
Frame = -1
Query: 531 LLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP*APILSCPRR 590
LLPPP PPP P P PP++ VS P G +P P P AP L P++
Sbjct: 516 LLPPPPPPPPPPPSPPHSPPSQIVSGP-------------GSSPPMKP-PKAPFLKNPKK 379
Query: 591 AETTVSRSS 599
+ T++++SS
Sbjct: 378 SRTSITKSS 352
>TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich RNA binding
protein 7 {Arabidopsis thaliana;} , partial (19%)
Length = 483
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/93 (34%), Positives = 42/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 490 GSRRGGRGPGHRARVRPWAGWRAERSSCRPAPSSLVAPRSRLLPPP--TRPPPLPSRAPP 547
G+ R P V P + A RSS AP+SL L PPP + PPP P PP
Sbjct: 23 GNTNHRRWPSSATAVNPTS---ASRSSPTTAPASL-----SLSPPPQPSNPPPPPPLPPP 178
Query: 548 HPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
P+ +L +P + AAP ++ S P P
Sbjct: 179 EMPSSPATLKSSPSSATATAAPSTKSTTSPPPP 277
Score = 33.1 bits (74), Expect = 0.36
Identities = 15/38 (39%), Positives = 18/38 (46%)
Frame = +3
Query: 521 PSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPH 558
P++ R PPP+ PP P P PP S S PH
Sbjct: 21 PATPTTADGRRPPPPSTQPPPPGALRPPPPLHSPSRPH 134
>AV427333
Length = 387
Score = 43.9 bits (102), Expect = 2e-04
Identities = 27/66 (40%), Positives = 30/66 (44%), Gaps = 4/66 (6%)
Frame = +3
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSR--APPHPPARSVSLPHAPLAPP*RAAPHGRAPAS 576
P+ S PR PPP+ PPP S PP P R PH P+ PP PH R P
Sbjct: 180 PSHSFAPPPRGHPSPPPSSPPPPSSHPFTPPPPHVRPPPSPHHPITPP----PHVRPPPP 347
Query: 577 --APSP 580
PSP
Sbjct: 348 PLPPSP 365
Score = 30.8 bits (68), Expect = 1.8
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Frame = +3
Query: 519 PAPSSLVAPRSRLLPP--PTRPPPLPS---RAPPHPPARSVSLPHA--PLAPP*RAAPHG 571
P PS P + PP P PPP PS ++PP PP+ S + P P PP P
Sbjct: 84 PPPSHPYNPPT---PPSHPFNPPPTPSHYFKSPP-PPSHSFAPPPRGHPSPPPSSPPPPS 251
Query: 572 RAPASAPSP 580
P + P P
Sbjct: 252 SHPFTPPPP 278
>AV407168
Length = 228
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/84 (39%), Positives = 38/84 (44%), Gaps = 7/84 (8%)
Frame = +1
Query: 518 RPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPP-----ARSVSLPHA--PLAPP*RAAPH 570
R P SL+ RS P PPP P PPHPP S PH+ P +PP PH
Sbjct: 7 RRRPPSLL--RSNASPLSKTPPPPPHSPPPHPPHWIP*PPIPSSPHSSHPPSPP----PH 168
Query: 571 GRAPASAPSP*APILSCPRRAETT 594
P S P+P P P R+ TT
Sbjct: 169 SPPPLSPPAPLPP----PPRSSTT 228
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 42.0 bits (97), Expect = 8e-04
Identities = 29/95 (30%), Positives = 41/95 (42%)
Frame = +1
Query: 505 RPWAGWRAERSSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP 564
+PW SS PAP V P T PPP P+ +PP P S S +P AP
Sbjct: 139 QPWLSSSPPSSSSSPAP---VPESPTTNSPTTAPPPPPASSPPPSPTHSPSSSPSPSAP- 306
Query: 565 *RAAPHGRAPASAPSP*APILSCPRRAETTVSRSS 599
+P + +PS + ++ P A ++ S S
Sbjct: 307 --TSPAATSTPPSPSASSSAVTSPSSAVSSTSSLS 405
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 42.0 bits (97), Expect = 8e-04
Identities = 27/73 (36%), Positives = 36/73 (48%), Gaps = 4/73 (5%)
Frame = +2
Query: 515 SSCRPAPSSLVAPRSRLLPPPTR--PPPLPSRAPP--HPPARSVSLPHAPLAPP*RAAPH 570
S P P++ P ++ PPP + PPP+ S PP PP S P PP ++ P
Sbjct: 212 SPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTP- 388
Query: 571 GRAPASAPSP*AP 583
APAS P P +P
Sbjct: 389 PPAPASTPPPASP 427
Score = 39.7 bits (91), Expect = 0.004
Identities = 21/62 (33%), Positives = 27/62 (42%)
Frame = +2
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAP 578
P P+S P PP + PPP+ S PP P + P +PP P PA+ P
Sbjct: 308 PPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPP---PPAATP 478
Query: 579 SP 580
P
Sbjct: 479 PP 484
Score = 38.1 bits (87), Expect = 0.011
Identities = 26/74 (35%), Positives = 37/74 (49%), Gaps = 1/74 (1%)
Frame = +2
Query: 514 RSSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRA 573
+S+ PAP+S P S PPP PPP P P +++ A P A ++
Sbjct: 377 QSTPPPAPASTPPPAS---PPPFSPPPATPPPPAATPPPALTPVPATSPAPAPAKVKSKS 547
Query: 574 PASAPSP-*APILS 586
PA AP+P AP++S
Sbjct: 548 PAPAPAPALAPVVS 589
Score = 35.0 bits (79), Expect = 0.094
Identities = 22/66 (33%), Positives = 25/66 (37%)
Frame = +2
Query: 515 SSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAP 574
+S P S P S P + PPP P+ PP S P A PP P P
Sbjct: 317 ASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPPPALTP 496
Query: 575 ASAPSP 580
A SP
Sbjct: 497 VPATSP 514
Score = 32.0 bits (71), Expect = 0.79
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 535 PTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
PT P P+ P PPA S P A +PP PAS P P
Sbjct: 203 PTTSPAPPTPTTPQPPAAQSSPPPAQSSPP--PVQSSPPPASTPPP 334
>TC10343 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (Fibrillarin
2) (AtFib2), partial (85%)
Length = 1116
Score = 42.0 bits (97), Expect = 8e-04
Identities = 27/60 (45%), Positives = 28/60 (46%)
Frame = -2
Query: 521 PSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
PS L + LLPP PPPLP R PP PP LP P PP RA P P P
Sbjct: 269 PSCL*GSTTTLLPPFI-PPPLPPRPPPRPP-----LPPPPPLPPPRALKGVPLPPPLPPP 108
Score = 30.8 bits (68), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (42%), Gaps = 1/53 (1%)
Frame = -2
Query: 533 PPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP-*RAAPHGRAPASAPSP*API 584
PPP P P P PP + V LP PL PP P P + P P P+
Sbjct: 200 PPPRPPLPPPPPLPPPRALKGVPLP-PPLPPPSPLPLPLSPLPLNPPPPPRPL 45
>TC12158 homologue to UP|143A_SOYBN (Q96450) 14-3-3-like protein A (SGF14A),
partial (54%)
Length = 562
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/101 (33%), Positives = 42/101 (40%), Gaps = 7/101 (6%)
Frame = -3
Query: 506 PWAGWR--AERSSCRPAPSSLVAPRSRLLPPPTRP--PPLPSRAPPHPPARSVSLPHAPL 561
P A WR + R P S R PPP+ P PP +P PP+ +LP AP
Sbjct: 359 PSAQWRR*SSRKPSSPQSHSCTPQRVSSSPPPSTPQRPPTWQPSP*TPPSPHTALP-APP 183
Query: 562 APP*RAAPHGRAPASAP---SP*APILSCPRRAETTVSRSS 599
P + +PHG P SP SC R T +R S
Sbjct: 182 TWPGKHSPHGETKNLQPPFFSPKFNTKSCEEREVTETNRGS 60
>TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific
extensin-like protein precursor (PELP), partial (11%)
Length = 630
Score = 41.2 bits (95), Expect = 0.001
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAP 578
PAP S V P + P T P P +AP PP V P P+ ++ P+ P AP
Sbjct: 140 PAPPSPVKPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIV---KSPPYFPPPVKAP 310
Query: 579 SP*APILSCP 588
SP PI+ P
Sbjct: 311 SP--PIVKSP 334
Score = 33.1 bits (74), Expect = 0.36
Identities = 19/55 (34%), Positives = 27/55 (48%)
Frame = +2
Query: 534 PPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP*APILSCP 588
PP PPP+ + +PP + V P P+ ++ P P APSP PI+ P
Sbjct: 278 PPYFPPPVKAPSPPIVKSPPVKAPTPPIV---KSPPSYPPPVKAPSP--PIVKSP 427
Score = 32.7 bits (73), Expect = 0.47
Identities = 15/47 (31%), Positives = 25/47 (52%)
Frame = +2
Query: 534 PPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
PP+ PPP+ + +PP + V P P+ ++ P+ P AP+P
Sbjct: 371 PPSYPPPVKAPSPPIVKSPPVKAPTPPIV---KSPPYYPPPVKAPTP 502
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/55 (36%), Positives = 26/55 (46%)
Frame = +2
Query: 534 PPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP*APILSCP 588
P PP P + PP P +V++P PL P + P APSP PI+ P
Sbjct: 131 PSVPAPPSPVK-PPTPSTPAVTVPTPPLVK--APTPPPQPPVKAPSP--PIVKSP 280
Score = 28.9 bits (63), Expect = 6.7
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +2
Query: 519 PAPSSLVAPRSRLLPPPTRP-PPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASA 577
P P +P PP P PP+ P +PP P PP PH P
Sbjct: 383 PPPVKAPSPPIVKSPPVKAPTPPIVKSPPYYPPPVKAPTPPQVKTPP----PH---PPVV 541
Query: 578 PSP*APILSCP 588
P API S P
Sbjct: 542 KPPVAPIPSTP 574
>AV408970
Length = 195
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/57 (43%), Positives = 28/57 (48%)
Frame = +2
Query: 527 PRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP*AP 583
PRS L+ P P LPS P PP +S AP PP +P SAPSP AP
Sbjct: 5 PRSSLVSTPK--P*LPSSPAPSPPPVPLSAASAPSPPPPSPPATSSSPPSAPSPPAP 169
Score = 33.9 bits (76), Expect = 0.21
Identities = 23/51 (45%), Positives = 25/51 (48%), Gaps = 9/51 (17%)
Frame = +2
Query: 522 SSLVAPRSRLLP--PPTRPPPLPSRA-------PPHPPARSVSLPHAPLAP 563
SSLV+ LP P PPP+P A PP PPA S S P AP P
Sbjct: 11 SSLVSTPKP*LPSSPAPSPPPVPLSAASAPSPPPPSPPATSSSPPSAPSPP 163
Score = 29.3 bits (64), Expect = 5.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 515 SSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP 564
SS P+P + + PP PP S +PP P+ P AP PP
Sbjct: 47 SSPAPSPPPVPLSAASAPSPPPPSPPATSSSPPSAPS-----PPAPPPPP 181
>BP078507
Length = 414
Score = 40.8 bits (94), Expect = 0.002
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -1
Query: 506 PWAGWRAERSSCRPAPSSLVAPRSRLLPP----PTRPPPLPSRAPPHPPARSVSLPHAPL 561
P + + A S RP PS+ P LL P P+ PP PS P PP S + PH P
Sbjct: 249 PTSPYPAPSSQLRPPPSTSHQPPPTLLQPTSDTPSPSPPPPSSPNPPPPHHSPNPPHPPS 70
Query: 562 APP 564
+ P
Sbjct: 69 SSP 61
Score = 35.4 bits (80), Expect = 0.072
Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 519 PAPSSLVAP--RSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPH-GRAPA 575
PAPSS + P + PPPT P P PP P +P PP +P+ P+
Sbjct: 234 PAPSSQLRPPPSTSHQPPPTLLQPTSDTPSPSPPP-----PSSPNPPPPHHSPNPPHPPS 70
Query: 576 SAPSP 580
S+PSP
Sbjct: 69 SSPSP 55
Score = 33.9 bits (76), Expect = 0.21
Identities = 25/87 (28%), Positives = 42/87 (47%), Gaps = 3/87 (3%)
Frame = -1
Query: 516 SCRPAPSSLVAPRSRLLPPPT---RPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGR 572
S +P+P++ +P P P+ RPPP S PP + S +P PP ++P+
Sbjct: 273 SPQPSPNAPTSP----YPAPSSQLRPPPSTSHQPPPTLLQPTSDTPSPSPPP-PSSPNPP 109
Query: 573 APASAPSP*APILSCPRRAETTVSRSS 599
P +P+P P S P +++ + S
Sbjct: 108 PPHHSPNPPHPPSSSPSPPQSSQGQRS 28
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding,
abscisic acid-inducible protein, complete
Length = 972
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/60 (41%), Positives = 27/60 (44%), Gaps = 9/60 (15%)
Frame = -1
Query: 533 PPPTR----PPPLPSRAPPHPPARSVSLPHAP-----LAPP*RAAPHGRAPASAPSP*AP 583
PPP+R PPP PSR PP+PP P P L PP P R P P P P
Sbjct: 783 PPPSRLPP*PPPPPSRRPPYPPPPLPP*PPPPPPL*RLPPPPPYPPSRRPPPYPPPPPPP 604
Score = 32.7 bits (73), Expect = 0.47
Identities = 24/54 (44%), Positives = 25/54 (45%), Gaps = 5/54 (9%)
Frame = -1
Query: 532 LPPPT-RPPPLPSRA---PPHPPARSVSLPHAPLAP-P*RAAPHGRAPASAPSP 580
LPP R PP PSR PP PP+R P PL P P P R P P P
Sbjct: 810 LPPLE*RDPPPPSRLPP*PPPPPSRRPPYPPPPLPP*PPPPPPL*RLPPPPPYP 649
Score = 31.6 bits (70), Expect = 1.0
Identities = 25/70 (35%), Positives = 26/70 (36%)
Frame = -1
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAP 578
P P S P PP PPP P P PP S P PP P RA AS
Sbjct: 753 PPPPSRRPPYPPPPLPP*PPPPPPL*RLPPPPPYPPSRRPPPYPPPPPPPPRPRAWASFT 574
Query: 579 SP*APILSCP 588
P +S P
Sbjct: 573 VTLRPSMSWP 544
>TC8573 similar to UP|Q9SIH5 (Q9SIH5) At2g36090 protein, partial (17%)
Length = 515
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/68 (38%), Positives = 34/68 (49%)
Frame = +3
Query: 521 PSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
P+SL+A + L PPP PPP + + P P+ S P P PP + P+S PSP
Sbjct: 177 PTSLLASTAPL*PPPLPPPPTSAASAPKTPSGGKSAP--PRGPP--SNNP*PTPSSPPSP 344
Query: 581 *APILSCP 588
LS P
Sbjct: 345 PPTALSSP 368
Score = 28.5 bits (62), Expect = 8.8
Identities = 26/85 (30%), Positives = 34/85 (39%), Gaps = 13/85 (15%)
Frame = +3
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSV-----SLPHAPLAPP*RAAPHGRA 573
P+ PR PP P P PS +PP PP ++ SLP L P P
Sbjct: 264 PSGGKSAPPRG---PPSNNP*PTPS-SPPSPPPTALSSPTPSLPSTTLLSPTSYHPRRLR 431
Query: 574 PASAP--------SP*APILSCPRR 590
+S+P +P P S PR+
Sbjct: 432 RSSSPPWTYTTRANPSFPESSAPRQ 506
>TC8136 similar to GB|AAB60729.1|2160166|F21M12 F21M12.13 {Arabidopsis
thaliana;}, partial (70%)
Length = 1659
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/78 (35%), Positives = 35/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 507 WAGWRAERSSCRPAPSSLVAPRSRL-LPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP* 565
W+ A AP++ AP L PP P S AP H ARS + P P APP
Sbjct: 404 WSSTPAPTRLSSRAPAAPAAPPPPLHFPPKHLPHTARSTAPSHCAARSAASPAPPRAPP- 580
Query: 566 RAAPHGRAPASAPSP*AP 583
RAP++ P+P P
Sbjct: 581 ------RAPSTNPTPAPP 616
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/39 (43%), Positives = 20/39 (50%)
Frame = +2
Query: 512 AERSSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPP 550
A RS+ PAP PR+ PP P P+ APP PP
Sbjct: 536 AARSAASPAP-----PRA----PPRAPSTNPTPAPPSPP 625
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Frame = +1
Query: 515 SSCRPAPSSLVAPRSRLLPPPTRPPP----------LP-SRAPPHPPARSVSLPHAPLAP 563
S+CR + + P + L PP + P LP S +PP PP+ P A +P
Sbjct: 316 SACRSSQNQTSPPETTLTPPTSSAPATSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSP 495
Query: 564 P*RAAPHGRAPASAPSP*AP 583
P A+P +P+ +P+P P
Sbjct: 496 PPTASPSAPSPSKSPTPSKP 555
Score = 33.5 bits (75), Expect = 0.27
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 473 PSGAVAPRVRDARRKAPGSRRGGRGPGHRARVRPWAGWR-AERSSCRPAPSSLVAPRSRL 531
P V P++R RR+ R H+ R G R A R RP P SRL
Sbjct: 203 PLRPVQPKIRPVRREKVPPHRVLVLRRHQRRTPLLLGPRHAARRKIRPLHRK---PLSRL 373
Query: 532 LPPPTRPPPLPSRAP 546
LPPP R P LP P
Sbjct: 374 LPPPLRRPLLPLLRP 418
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/46 (36%), Positives = 20/46 (42%)
Frame = +1
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP 564
P S P S L PPP P P A P P+ S S + +PP
Sbjct: 427 PKSPSPPPPPSPLSPPPPASPSPPPTASPSAPSPSKSPTPSKPSPP 564
Score = 28.9 bits (63), Expect = 6.7
Identities = 29/112 (25%), Positives = 37/112 (32%), Gaps = 3/112 (2%)
Frame = +1
Query: 472 SPSGAVAPRVRDARRKAPGSRRGGRG---PGHRARVRPWAGWRAERSSCRPAPSSLVAPR 528
S SGA P A + R + P P + A +S P + +P
Sbjct: 262 SSSGAPTPPTPHAASPGASACRSSQNQTSPPETTLTPPTSSAPATSASSSPPHTLPKSPS 441
Query: 529 SRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHGRAPASAPSP 580
P P PPP S +PP P A P +P S PSP
Sbjct: 442 PPPPPSPLSPPPPASPSPP------------PTASPSAPSPSKSPTPSKPSP 561
>BI420016
Length = 559
Score = 39.7 bits (91), Expect = 0.004
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +2
Query: 516 SCRPAPSSLVAPRS--RLLPPPTRPPPLPS-----RAPPHPPARSVSLPHAPLAPP*RAA 568
S +P P+S +P S L PPP+ P P P+ +PP PP S P +P P +A
Sbjct: 212 SPKPVPASTPSPPSSPTLTPPPSPPSPTPNAPLSPSSPPSPPT-PPSPPPSPAPNPTPSA 388
Query: 569 PHGRAPASAPSP*APILSCPRRAETTVSRS 598
P+S +P + LS P + S S
Sbjct: 389 TGSTTPSSPLTPTSASLSSPSSLFSPASTS 478
Score = 35.4 bits (80), Expect = 0.072
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 519 PAPSSLVAPRSRLLPPPTRPPPLPSRAP-PHPPARSVSLPHAPLAPP*RAAPHGRAPASA 577
P P++ ++P S PPT P P PS AP P P A + P +PL P A+ + +
Sbjct: 290 PTPNAPLSPSSPP-SPPTPPSPPPSPAPNPTPSATGSTTPSSPLTPT-SASLSSPSSLFS 463
Query: 578 PSP*APILSCPRRAETTVSR 597
P+ +P + TT+ R
Sbjct: 464 PASTSPASTTATTTTTTMIR 523
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 39.7 bits (91), Expect = 0.004
Identities = 27/90 (30%), Positives = 40/90 (44%)
Frame = +3
Query: 510 WRAERSSCRPAPSSLVAPRSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAP 569
W ++ R PSS +P PPP PP P+ A PP S +LP P P
Sbjct: 69 WLLSSAASRSPPSSSSSPS----PPP--PPHAPAAASSSPPTPSATLPPTPSPP------ 212
Query: 570 HGRAPASAPSP*APILSCPRRAETTVSRSS 599
+P S PSP + + P + +T +++
Sbjct: 213 ---SPRSDPSPLSTSTTNPTTSSSTTPKTT 293
>TC7814 similar to UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic
membrane protein 1, partial (37%)
Length = 660
Score = 33.9 bits (76), Expect = 0.21
Identities = 25/75 (33%), Positives = 36/75 (47%), Gaps = 3/75 (4%)
Frame = +2
Query: 515 SSCRPAPSSLVAP---RSRLLPPPTRPPPLPSRAPPHPPARSVSLPHAPLAPP*RAAPHG 571
SS P+ SS AP + P T PPP P +PP P H+P + P ++P
Sbjct: 455 SSSPPSSSSSPAPVPESPTINSPMTVPPPPPXSSPPPSPM------HSPSSSPSXSSP-- 610
Query: 572 RAPASAPSP*APILS 586
+PA+ +P +P S
Sbjct: 611 TSPAATSTPXSPSXS 655
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.374 0.168 0.692
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,928,313
Number of Sequences: 28460
Number of extensions: 558750
Number of successful extensions: 18729
Number of sequences better than 10.0: 581
Number of HSP's better than 10.0 without gapping: 7433
Number of HSP's successfully gapped in prelim test: 594
Number of HSP's that attempted gapping in prelim test: 3754
Number of HSP's gapped (non-prelim): 12202
length of query: 1619
length of database: 4,897,600
effective HSP length: 103
effective length of query: 1516
effective length of database: 1,966,220
effective search space: 2980789520
effective search space used: 2980789520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 13 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (22.0 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146331.12