BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145513.6 + phase: 0
(882 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (... 177 6e-45
AV406755 143 1e-34
AV409408 126 2e-29
CB828263 108 4e-24
AV770426 108 4e-24
AV779547 105 4e-23
AV410283 102 3e-22
BP045440 93 2e-19
TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like... 87 1e-17
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 84 7e-17
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 82 4e-16
BP064315 74 1e-13
BP065014 72 4e-13
AV778571 69 3e-12
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 69 4e-12
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 67 9e-12
AV427118 56 2e-08
TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resista... 55 5e-08
TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like pr... 51 7e-07
TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%) 50 2e-06
>TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (28%)
Length = 918
Score = 177 bits (449), Expect = 6e-45
Identities = 97/252 (38%), Positives = 154/252 (60%), Gaps = 1/252 (0%)
Frame = +1
Query: 333 DFIYEAEELNASESLELFCKHAFRKAIPTQDFLILSRDVVAYCGGIPLALEVLGSYLFKR 392
D IYE +E++ +SL+LF +AF++ P + ++ LS+ +++Y GIPLAL+VLG +L+ R
Sbjct: 4 DEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYGR 183
Query: 393 KKQEWRSVLSKLEKIPNDQIHEILKISFDGLKDRMEKNIFLDVCCFFIGKDRAYVTKILN 452
+++ W S L KLEK+P+ +I +LK+S+DGL D +K+IFLD+ CF++G V + L+
Sbjct: 184 ERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDD-QKDIFLDIACFYLGHLEESVAQTLD 360
Query: 453 GCGLNADIGITVLIERSLIKVEKNKKLGMHALLRDMGREIVRESSPEEPEKHTRLWCHED 512
CG ADIG+ VL +R LI + + ++ MH L+ MG+EIVR+ P +P K +RLW +
Sbjct: 361 SCGFFADIGMEVLKDRCLISILEG-RIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQ 537
Query: 513 VVNVLADYTGTKAIEGLVMKLPKTNRVCFDTIAFEKMIRLRLLQLDNVQVIG-DYKCFPK 571
+VL GT AI+ + + V F+ M LR+LQ +V +C P
Sbjct: 538 TYDVLGKNKGTDAIQCIFLYTCPIKIVNLHAETFKYMTNLRMLQFYKSRVCSLALECDPS 717
Query: 572 HLRWLSWQGFPL 583
+ W S + F +
Sbjct: 718 CISWKSPESFTI 753
Score = 48.9 bits (115), Expect = 3e-06
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +2
Query: 559 NVQVIGDYKCFPKHLRWLSWQGFPLKYTPENFYQKNLVAMELKHSNLAQVWKKPQLIEGL 618
NV + P HL++L W GFPL+Y P +F +NLV ++++ S+L +K ++ + L
Sbjct: 704 NVILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHFGRKIRIYQTL 883
Query: 619 K 619
K
Sbjct: 884 K 886
>AV406755
Length = 425
Score = 143 bits (361), Expect = 1e-34
Identities = 64/111 (57%), Positives = 91/111 (81%)
Frame = +3
Query: 7 KPQSKWTYDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQ 66
KP+SKW+YDVF++FRG ++R++F SHLYTAL NAGI F+DNE LQ+G+++ L++AI+
Sbjct: 63 KPKSKWSYDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMDNE-LQRGEDISSSLLKAIE 239
Query: 67 GSQIAIVVFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIRQ 117
S+IAI++FS NY S+WCL EL++I+EC+ GQ VMPVFY + PS+IR+
Sbjct: 240 DSRIAIIIFSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRK 392
>AV409408
Length = 430
Score = 126 bits (316), Expect = 2e-29
Identities = 65/142 (45%), Positives = 93/142 (64%)
Frame = +2
Query: 376 GGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILKISFDGLKDRMEKNIFLDV 435
GG+PLALEVLGS+L R +W L K++K+P+D I L+IS+D L+D K +FLD+
Sbjct: 2 GGLPLALEVLGSFLCGRSLSDWEDALIKIKKVPHDDILNKLRISYDMLEDE-HKTLFLDI 178
Query: 436 CCFFIGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNKKLGMHALLRDMGREIVRE 495
CFF G + V ++L CGL+ +GI VLIE+SL+ + + +GMH LL +MG+ V
Sbjct: 179 ACFFKGWYKHKVIQLLGSCGLHPTVGINVLIEKSLLTFD-GRVIGMHDLLEEMGKTEVFL 355
Query: 496 SSPEEPEKHTRLWCHEDVVNVL 517
SP +P + +RLW ED+ VL
Sbjct: 356 ESPNDPGRRSRLWSLEDIDQVL 421
>CB828263
Length = 570
Score = 108 bits (270), Expect = 4e-24
Identities = 54/131 (41%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Frame = +2
Query: 50 NLQKGKELGPELIRAIQGSQIAIVVFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYC 109
+LQ+G E+ L+RAI+ ++++++VFSKNY +S+WCL EL +I+ECK GQ+V+PVFY
Sbjct: 5 DLQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFYD 184
Query: 110 ITPSNIRQYAVTRFSETTL---FFDELVPFMNTLQDASYLSGWDLSNYSNESKVVKEIVS 166
I PS++R T ++E + D++ + L++A+ LSGWD S ES+V+++I
Sbjct: 185 IDPSHVRNQTGT-YAEAFVKHGQVDKVQKWREALREAANLSGWDCSVNRMESEVIEKIAK 361
Query: 167 QVLKNLDNKYL 177
VL+ L+ Y+
Sbjct: 362 DVLEKLNRVYV 394
>AV770426
Length = 517
Score = 108 bits (270), Expect = 4e-24
Identities = 52/91 (57%), Positives = 69/91 (75%)
Frame = +3
Query: 672 DCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSIV 731
DC S +Y+ + +++L+LSGCSKIDK+EEDI+QMESLT L A +T + Q P S++
Sbjct: 9 DCKSSSTSQESVYKSKSLKSLVLSGCSKIDKMEEDIMQMESLTNLEADDTAITQVPDSLM 188
Query: 732 RSKSIGYISLCGYEGLSHHVFPSLIRSWISP 762
R K+I ++SLCGYEGLS HVFPSLI S +SP
Sbjct: 189 RLKNIKHVSLCGYEGLSSHVFPSLILSLMSP 281
>AV779547
Length = 556
Score = 105 bits (261), Expect = 4e-23
Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Frame = +1
Query: 18 INFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIVVFSK 77
++FRG DTR F HL AL G TF D+ L+KGK + ELI+AI+GSQI IVVFSK
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 78 NYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIRQYAVTRFSETTLFFDE----- 132
Y S WCL EL +I + Q V+PV +TPS +R+ + + E L +E
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQS-GNYGEAFLKHEERFKED 465
Query: 133 ---LVPFMNTLQDASYLSGWDLSN 153
+ + L + + LSGWD++N
Sbjct: 466 LEMVQRWRKALAEVADLSGWDVTN 537
>AV410283
Length = 426
Score = 102 bits (254), Expect = 3e-22
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +1
Query: 270 VLSVEQGKTMIKQQLRAKRILAVLDDVSELEQFDALC-QRNSVGPGSIIIITTRDLRVLN 328
V V G + IK+ L+ ++L +LDDV E++Q D L R GS ++ITTR+ +VL
Sbjct: 40 VNDVNDGVSAIKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGSRVVITTRNTQVLP 219
Query: 329 ILEVDFIYEAEELNASESLELFCKHAFRKAIPTQDFLILSRDVVAYCGGIPLALEVLGSY 388
VD YE EL S +L LFC HA R+ P + F LS+ +V GG+PLALEV+GS+
Sbjct: 220 ESYVDMFYEVRELELSAALALFCHHAMRRKKPAEGFSNLSKQIVKKTGGLPLALEVIGSF 399
Query: 389 LFKRK 393
LF ++
Sbjct: 400 LFDKR 414
>BP045440
Length = 535
Score = 93.2 bits (230), Expect = 2e-19
Identities = 47/114 (41%), Positives = 72/114 (62%), Gaps = 2/114 (1%)
Frame = -3
Query: 14 YDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIV 73
Y +FI+FRG DTR F LY L G TF D+E+L+ G + +L+ I+ S+ AI+
Sbjct: 527 YQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPI-EKLLDDIEESRFAII 351
Query: 74 VFSKNYVHSRWCLSELKQIMECKANDG--QVVMPVFYCITPSNIRQYAVTRFSE 125
+ SKNY S WCL EL +I+ECK +G Q+V+P +TP+ +R + + R+++
Sbjct: 350 ILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVR-HVINRYAD 192
>TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like, partial
(5%)
Length = 689
Score = 87.0 bits (214), Expect = 1e-17
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = -2
Query: 6 SKPQSKWTYDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAI 65
S +W YDVFINFRG DTR +F+SHLYTAL+NAG+N FLD+ENL++G EL PEL + I
Sbjct: 226 SSSNHQWIYDVFINFRGKDTRHSFVSHLYTALSNAGVNVFLDDENLERGLELEPELQKLI 47
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 84.3 bits (207), Expect = 7e-17
Identities = 45/107 (42%), Positives = 67/107 (62%)
Frame = +1
Query: 10 SKWTYDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQ 69
S + YDVFI+ +DTR F LYTAL++ GI TF+D+ + + +AI+ S+
Sbjct: 91 SSFIYDVFISLITSDTRFGFSGDLYTALSDKGILTFIDDGLPRPDDIMSTVNSKAIESSR 270
Query: 70 IAIVVFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIR 116
IAIVV S+NY S +CL EL I++ + G ++ PVFY + PS++R
Sbjct: 271 IAIVVISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVR 411
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 82.0 bits (201), Expect = 4e-16
Identities = 46/144 (31%), Positives = 76/144 (51%), Gaps = 7/144 (4%)
Frame = +1
Query: 33 LYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIVVFSKNYVHSRWCLSELKQI 92
LY AL G TF+D+E L G E+ L+ A + S+++I+VFS+NY +S WCL EL +I
Sbjct: 1 LYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKI 180
Query: 93 MECKANDGQVVMPVFYCITPSNI----RQYAVTRFSETTLF---FDELVPFMNTLQDASY 145
+EC Q+V P+FY + S++ Y + DE+ + + L +
Sbjct: 181 VECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALSAMAK 360
Query: 146 LSGWDLSNYSNESKVVKEIVSQVL 169
L G ++ E + +K+IV + +
Sbjct: 361 LEGHNVKENKYEYEFIKKIVEKAI 432
>BP064315
Length = 350
Score = 73.6 bits (179), Expect = 1e-13
Identities = 44/98 (44%), Positives = 61/98 (61%), Gaps = 5/98 (5%)
Frame = +1
Query: 272 SVEQGKTMIKQQLRAKRILAVLDDVSELEQFDALCQRNS-VGPGSIIIITTRDLRVLNIL 330
S +G IK++L KR+L VLDDV +++Q AL G GS IIITTRD +L+
Sbjct: 31 STFRGDFEIKRRLSNKRVLLVLDDVDKIKQLQALAGGGDWFGSGSRIIITTRDTTMLDKH 210
Query: 331 EVDFI----YEAEELNASESLELFCKHAFRKAIPTQDF 364
++D + Y+ EELN +SLELFC HAF + P ++F
Sbjct: 211 KMDDVIMKKYKMEELNDHDSLELFCWHAFNMSTPAENF 324
>BP065014
Length = 498
Score = 72.0 bits (175), Expect = 4e-13
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Frame = -2
Query: 45 FLDNENLQKGKELGPELIRAIQGSQIAIVVFSKNYVHSRWCLSELKQIMECKANDGQVVM 104
F D+ +L+ G + EL+ AI+ S++AIVV S+N+ S+WCL EL +I++C+ +V+
Sbjct: 497 FKDDLSLEDGAPI-EELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 321
Query: 105 PVFYCITPSNIRQYAVTRFSETTLFFDELV--------PFMNTLQDASYLSGWDLSNYSN 156
P+FY + P+NIR + R+ E ++ + + L D SYL G Y
Sbjct: 320 PIFYKVEPTNIR-HLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKGEPYKGYVV 144
Query: 157 ESKVVKEIVSQVLKNLDNKYL 177
+ + ++ S +L N Y+
Sbjct: 143 KLSITFQL-SSILLNSFRMYI 84
>AV778571
Length = 452
Score = 68.9 bits (167), Expect = 3e-12
Identities = 36/107 (33%), Positives = 63/107 (58%)
Frame = +3
Query: 624 SHSKNLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLMLNLKDCTSLGNLPREI 683
S +++ + PD S LPNLEKL ++L+++H S+G L L +L+++ C + P
Sbjct: 39 SECESITQIPDLSGLPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFPP-- 212
Query: 684 YQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSI 730
+L +E L LS CS ++ E + +ME++T + +T +K+ P SI
Sbjct: 213 MKLASLEELYLSHCSSLESFPEILAKMENITLIGVYHTPIKELPSSI 353
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 68.6 bits (166), Expect = 4e-12
Identities = 63/228 (27%), Positives = 110/228 (47%), Gaps = 14/228 (6%)
Frame = +3
Query: 184 VGLEPRAEKSIRFLRQNTRGVCLVGIWGMGGIGKSTIAKVIYND--LCYEFENQSFLANI 241
VG++ R +K + L + ++ + GMGG+GK+T+ K +Y+D + F +++ +
Sbjct: 198 VGIDRRKKKLMGCLIKPCPVRKVISVTGMGGMGKTTLVKQVYDDPVVIKHFRACAWI-TV 374
Query: 242 REVWEKDRGRIDLQEQFLSDILKTRKIKV--LSVEQGKTMIKQQLRAKRILAVLDDVSEL 299
+ E DL Q S+I + + + + ++ K +IK L+ +R L V DDV +
Sbjct: 375 SQSCEIGELLRDLARQLFSEIRRPVPLGLENMRCDRLKMIIKDLLQRRRYLVVFDDVWHV 554
Query: 300 EQFD----ALCQRNSVGPGSIIIITTR--DLRVLNILE-VDFIYEAEELNASESLELFCK 352
+++ AL N GS I+ITTR DL + E +Y + L E+ ELFC+
Sbjct: 555 REWEAVKYALPDNNC---GSRIMITTRRSDLAFTSSTESKGKVYNLQPLKEDEAWELFCR 725
Query: 353 HAFRKAIPTQDFLILSRDVVAYCGGIPLALEVLGSYLF---KRKKQEW 397
F + + ++ C G+PLA+ + L KR+ EW
Sbjct: 726 KTFHGDSCPSHLIGICTYILRKCEGLPLAIVAISGVLATKDKRRIDEW 869
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 67.4 bits (163), Expect = 9e-12
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Frame = +2
Query: 288 RILAVLDDVSELEQFDALCQRNSVGPGSIIIITTRDL--RVLNILEVDFIYEAEELNASE 345
+IL VLDDV L + L R PG ++ +R R+ N Y+ E L+ +
Sbjct: 209 QILVVLDDVWSLPVLEQLVLRV---PGCKYLVVSRFKFQRIFNDT-----YDVELLSEGD 364
Query: 346 SLELFCKHAF-RKAIPTQDFLILSRDVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKL 404
+L LFC HAF K+IP L + VVA CG +PLAL+V+G+ L + + W SV ++L
Sbjct: 365 ALSLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKTRL 544
Query: 405 EK-IPNDQIHEI-----LKISFDGLKDRMEKNIFLDVCCF 438
+ + + +E+ + IS + L +++ K FLD+C F
Sbjct: 545 SQGLSIGESYEVNLIDRMAISTNYLPEKV-KECFLDLCAF 661
>AV427118
Length = 317
Score = 56.2 bits (134), Expect = 2e-08
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +3
Query: 462 ITVLIERSLIKVEKNKKLGMHALLRDMGREIVRESSPEEPEKHTRLWCHEDVVNVLADYT 521
I+ L+ + LI + + +L +H +R+MG+EIVR S P +RLW +D+ VL D T
Sbjct: 54 ISALVSKFLINISSSGELTLHEWMRNMGKEIVRRKSSRMPCVSSRLWILQDIRQVLEDCT 233
Query: 522 GTKAIEGLVMKLPKT 536
GT I + + L T
Sbjct: 234 GTHKIRTICLDLSST 278
>TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resistance
protein-like protein MsR1, partial (5%)
Length = 766
Score = 55.1 bits (131), Expect = 5e-08
Identities = 32/98 (32%), Positives = 51/98 (51%)
Frame = +1
Query: 634 DFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLI 693
+ KL NLE L + C L + SIG L L +L++ +C SL +LP EI L +++L
Sbjct: 4 EIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLY 183
Query: 694 LSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSIV 731
++ C+ + L IV +++LT + T F V
Sbjct: 184 MTSCAGCE-LPSSIVNLQNLTVVCDEETAASWEAFEYV 294
Score = 45.4 bits (106), Expect = 4e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +1
Query: 659 IGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMA 718
IG L+NL +L L CT L LP I +L ++ L +S C + L E+I + +L +L
Sbjct: 7 IGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYM 186
Query: 719 ANTGVKQPPFSIVRSKSI 736
+ + P SIV +++
Sbjct: 187 TSCAGCELPSSIVNLQNL 240
>TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like protein
(Fragment), partial (36%)
Length = 859
Score = 51.2 bits (121), Expect = 7e-07
Identities = 30/77 (38%), Positives = 47/77 (60%), Gaps = 4/77 (5%)
Frame = +3
Query: 191 EKSIRFLR----QNTRGVCLVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANIREVWE 246
+KSI L Q ++ V ++GIWGMGGIGK+TIA+ I+N ++E FL+ +++
Sbjct: 558 DKSIAHLESLLCQESKDVRVIGIWGMGGIGKTTIAEEIFNRRHSQYEGICFLSKVKDEL* 737
Query: 247 KDRGRIDLQEQFLSDIL 263
K G L+E+ S +L
Sbjct: 738 K-HGMQSLREKLFSTLL 785
>TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%)
Length = 586
Score = 49.7 bits (117), Expect = 2e-06
Identities = 22/61 (36%), Positives = 42/61 (68%)
Frame = +3
Query: 653 LEVHPSIGDLKNLLMLNLKDCTSLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMES 712
LE+ SI +L+ + L++ DC SL +LP ++ +L+++E L + GCS++ +L I+ +E+
Sbjct: 3 LELPKSITNLEQVQFLDISDCISLSHLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLEN 182
Query: 713 L 713
L
Sbjct: 183 L 185
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,922,610
Number of Sequences: 28460
Number of extensions: 199291
Number of successful extensions: 1013
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of query: 882
length of database: 4,897,600
effective HSP length: 98
effective length of query: 784
effective length of database: 2,108,520
effective search space: 1653079680
effective search space used: 1653079680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC145513.6