TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145218.1 - phase: 0 
         (63 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC10028 weakly similar to UP|Q9LXX7 (Q9LXX7) Cytochrome P450-lik...    55  3e-09
AV422500                                                               33  0.014
CB827746                                                               26  1.3
BP050372                                                               24  6.6
TC14393 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, p...    23  8.6

>TC10028 weakly similar to UP|Q9LXX7 (Q9LXX7) Cytochrome P450-like protein,
           partial (16%)
          Length = 874

 Score = 54.7 bits (130), Expect = 3e-09
 Identities = 28/52 (53%), Positives = 37/52 (70%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARD-EKIFDLRDIMRSSS 51
           MAS+EL SV +RSYA+E++NEEI TRL P M + A     + DL+DI+R  S
Sbjct: 472 MASMELGSVAIRSYAMELVNEEIQTRLTPLMAATAASANNVLDLQDILRRFS 627


>AV422500 
          Length = 446

 Score = 32.7 bits (73), Expect = 0.014
 Identities = 14/47 (29%), Positives = 27/47 (56%)
 Frame = -3

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           +AS   T  +VR +    + EE+   L+P M   A +E++ DL++++
Sbjct: 408 LASHVFTPRSVRQFVTTTLEEEVRENLLPAMEVLAEEERVVDLQELL 268


>CB827746 
          Length = 550

 Score = 26.2 bits (56), Expect = 1.3
 Identities = 18/54 (33%), Positives = 26/54 (47%)
 Frame = +3

Query: 3   SLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIMRSSSKYMSK 56
           S+  TS TVRS +L ++   I    +PF  SFA       L  I+ S S  + +
Sbjct: 96  SILRTSSTVRSGSLHLLPPRISHTPLPFPLSFASKLGFIGLGLILLSVSNQLDR 257


>BP050372 
          Length = 332

 Score = 23.9 bits (50), Expect = 6.6
 Identities = 8/22 (36%), Positives = 15/22 (67%)
 Frame = -3

Query: 26  RLIPFMFSFARDEKIFDLRDIM 47
           +++PFMF +     IFDL +++
Sbjct: 273 KILPFMFPYTSQLHIFDLFNVL 208


>TC14393 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, partial
          (85%)
          Length = 786

 Score = 23.5 bits (49), Expect = 8.6
 Identities = 8/15 (53%), Positives = 12/15 (79%)
 Frame = -1

Query: 26 RLIPFMFSFARDEKI 40
          RL+PF+F F R+ +I
Sbjct: 75 RLLPFLFGFEREREI 31


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.325    0.135    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 697,996
Number of Sequences: 28460
Number of extensions: 5169
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of query: 63
length of database: 4,897,600
effective HSP length: 39
effective length of query: 24
effective length of database: 3,787,660
effective search space: 90903840
effective search space used: 90903840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)