TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.9 + phase: 0 
         (273 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP034966                                                               28  1.7
AV780096                                                               27  4.9
TC20244                                                                27  4.9
TC16775 similar to GB|AAA56991.1|600710|ATHSAR1 formerly called ...    26  8.3
TC11013 weakly similar to UP|Q8H965 (Q8H965) Phosphatidylglycero...    26  8.3

>BP034966 
          Length = 546

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 33/139 (23%), Positives = 62/139 (43%), Gaps = 10/139 (7%)
 Frame = +2

Query: 12  FSDCLNVCAKGGLLDTGSHYIQCWKQNERADPGWANSHDLYAIEQKFMENCALNY----F 67
           F+D LN+  KGG+L   +      K N+     + +  +L    QK +E+  L+      
Sbjct: 80  FTDFLNLFQKGGVLRNSA------KMNDLMTSSFLSYVELKKQAQKDLEDVDLDIEAGNL 241

Query: 68  DKNDYRSMMKFVRAFHSIDLKRGFLQSLNLPDELLELEEESGNFMEAAV------NIAKT 121
           +  +  ++ +F R   +I ++    +  NL  +L +L EE+ +   A V       +   
Sbjct: 242 NPTEDPNLSQFFREVEAIKVE--MEEITNLLSDLQQLNEETKSTHSAKVLRGLRDRMDSD 415

Query: 122 MGDILREADLLGKAGEFLD 140
           M  +LR+A ++    E LD
Sbjct: 416 MVAVLRKAKIIKARLEVLD 472


>AV780096 
          Length = 564

 Score = 26.6 bits (57), Expect = 4.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 207 EIVNQLKSSRIHSSIRGEILCLWELLD 233
           EIV    SS +H SI G ILC+  LL+
Sbjct: 378 EIVQPTLSSIVHISINGCILCIQYLLN 298


>TC20244 
          Length = 513

 Score = 26.6 bits (57), Expect = 4.9
 Identities = 11/31 (35%), Positives = 18/31 (57%)
 Frame = -2

Query: 61  NCALNYFDKNDYRSMMKFVRAFHSIDLKRGF 91
           NCALN  D  +Y S+   ++   ++ L RG+
Sbjct: 497 NCALNVVDLLNYMSLTLLIKKKKNMSLTRGY 405


>TC16775 similar to GB|AAA56991.1|600710|ATHSAR1 formerly called HAT24;
           synaptobrevin-related protein {Arabidopsis thaliana;} ,
           partial (35%)
          Length = 567

 Score = 25.8 bits (55), Expect = 8.3
 Identities = 9/24 (37%), Positives = 13/24 (53%)
 Frame = +1

Query: 12  FSDCLNVCAKGGLLDTGSHYIQCW 35
           + D +N C     LD+ SHY+  W
Sbjct: 142 YEDQVNCCGYHSSLDSHSHYLHLW 213


>TC11013 weakly similar to UP|Q8H965 (Q8H965) Phosphatidylglycerol specific
           phospholipase C, partial (8%)
          Length = 499

 Score = 25.8 bits (55), Expect = 8.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 5   VYARGSFFSDCLNVCAKGGLLDTGSHYIQCW 35
           ++   +FF  C+N+C K  L  + S ++ C+
Sbjct: 369 IFYHVAFFHFCINICIKKNLKTSYSVHVTCF 277


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.322    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,835,266
Number of Sequences: 28460
Number of extensions: 60070
Number of successful extensions: 299
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of query: 273
length of database: 4,897,600
effective HSP length: 89
effective length of query: 184
effective length of database: 2,364,660
effective search space: 435097440
effective search space used: 435097440
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)