BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144722.2 + phase: 0
(624 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%) 418 e-117
TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%) 394 e-112
TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa pro... 319 3e-91
BP040870 259 7e-70
BP044919 253 8e-68
BP041494 171 2e-63
TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment),... 226 6e-60
TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat... 217 5e-57
AW720237 199 1e-51
BP064075 166 1e-41
TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, p... 146 8e-36
AV769455 127 7e-30
BP083571 119 1e-27
AV766006 108 3e-24
BP033771 104 4e-23
CB827219 101 3e-22
AW163930 100 5e-22
TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein ... 79 3e-15
AV409958 76 1e-14
AW428869 73 2e-13
>TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%)
Length = 1570
Score = 418 bits (1074), Expect = e-117
Identities = 229/405 (56%), Positives = 291/405 (71%), Gaps = 3/405 (0%)
Frame = +1
Query: 215 VSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELKKKNKVDISQNPKSLRRLRTA 274
VS+LTI+ +FEVKATAG+THLGGEDFDNRMVN+FV+E K+KNK DIS NP++LRRLRTA
Sbjct: 1 VSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTA 180
Query: 275 CERAKRILSFAFVTTVEVDALFTGIDFCSSITRAKFEELNMDFFNECMNIVDTCLRDSKI 334
CERAKR LS TT+E+D+L+ GIDF S ITRA+FEE+NMD F +CM V+ CLRD+K+
Sbjct: 181 CERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKM 360
Query: 335 YKNDIDDVVLVGGSSRIPKVQEQLLEYFKGKELFMGINPDEAVAYGAAVQAAILS-EGCK 393
K + DVVLVGGS+RIPKVQ+ L ++F GKEL INPDEAVAYGAAVQAAILS EG +
Sbjct: 361 DKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE 540
Query: 394 NVPNLVLRDVTPLSLGISVSIEHIMSVVIPRNTSIPVKKTSRYSTLYDNQCLVNFLVYEG 453
V +L+L DVTPLSLG+ + +M+V+IPRNT+IP KK +ST DNQ V V+EG
Sbjct: 541 KVQDLLLLDVTPLSLGLETA-GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEG 717
Query: 454 ERPRAADNNLLGSFGLRCL-PGPRGQP-LEVCFSIDENGILTVTAREISTGNMNMITITN 511
ER R DNNLLG F L + P PRG P + VCF ID NGIL V+A + +TG N ITITN
Sbjct: 718 ERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITN 897
Query: 512 DKERLSMFDIEKMIKEAEKYHVEDMQFLRRAKVMCELDSCVYNMKKALKKKDVNLILSPQ 571
DK RLS DIEKM++EAEKY ED + ++ + L++ YNM+ +K + + L
Sbjct: 898 DKGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIAGKLDSA 1077
Query: 572 EIAKINNAITVAMDLLDKNKKEKEIDVLEGYLEELERMSKHLISK 616
+ KI +AI A+ L+ N+ E D E ++ELE + +I+K
Sbjct: 1078DKTKIEDAIEQAIQWLESNQL-AEADEFEDKMKELESICNPIIAK 1209
>TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%)
Length = 1528
Score = 394 bits (1013), Expect(2) = e-112
Identities = 217/383 (56%), Positives = 272/383 (70%), Gaps = 3/383 (0%)
Frame = +3
Query: 237 GGEDFDNRMVNYFVEELKKKNKVDISQNPKSLRRLRTACERAKRILSFAFVTTVEVDALF 296
GGEDFDNRMVN+FV+E K+KNK DIS NP++LRRLRTACERAKR LS TT+E+D+L+
Sbjct: 48 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY 227
Query: 297 TGIDFCSSITRAKFEELNMDFFNECMNIVDTCLRDSKIYKNDIDDVVLVGGSSRIPKVQE 356
GIDF S ITRA+FEELNMD F +CM V+ CLRD+K+ K + DVVLVGGS+RIPKVQ+
Sbjct: 228 EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQ 407
Query: 357 QLLEYFKGKELFMGINPDEAVAYGAAVQAAILS-EGCKNVPNLVLRDVTPLSLGISVSIE 415
L ++F GKEL INPDEAVAYGAAVQAAILS EG + V +L+L DVTPLSLG+ +
Sbjct: 408 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETA-G 584
Query: 416 HIMSVVIPRNTSIPVKKTSRYSTLYDNQCLVNFLVYEGERPRAADNNLLGSFGLRCL-PG 474
+M+V+IPRNT+IP KK +ST DNQ V VYEGER R DNNLLG F L + P
Sbjct: 585 GVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPA 764
Query: 475 PRGQP-LEVCFSIDENGILTVTAREISTGNMNMITITNDKERLSMFDIEKMIKEAEKYHV 533
PRG P + VCF ID NGIL V+A + +TG N ITITNDK RLS DIEKM++EAEKY
Sbjct: 765 PRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKS 944
Query: 534 EDMQFLRRAKVMCELDSCVYNMKKALKKKDVNLILSPQEIAKINNAITVAMDLLDKNKKE 593
ED + ++ + L++ YNM+ +K + + L P + KI +AI A+ LD N+
Sbjct: 945 EDEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLDSNQL- 1121
Query: 594 KEIDVLEGYLEELERMSKHLISK 616
E D E ++ELE + +I+K
Sbjct: 1122AEADEFEDKMKELESICNPIIAK 1190
Score = 27.7 bits (60), Expect(2) = e-112
Identities = 11/13 (84%), Positives = 13/13 (99%)
Frame = +1
Query: 224 VFEVKATAGNTHL 236
+FEVKATAG+THL
Sbjct: 10 IFEVKATAGDTHL 48
>TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (74%)
Length = 1752
Score = 319 bits (817), Expect(2) = 3e-91
Identities = 189/383 (49%), Positives = 247/383 (64%), Gaps = 8/383 (2%)
Frame = +3
Query: 135 EVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPTAAAIAYGLDKR 194
E AEAYLG V AV+TVPAYFND+ R+AT DAG IAGL+V RIINEPTAAA++YG+ +
Sbjct: 3 ETAEAYLGKSVSKAVITVPAYFNDAHRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNK 182
Query: 195 NDCDGSRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELK 254
I VFDLGGGTFDVSIL I VFEVKAT G+T LGGEDFDN ++++ V+E K
Sbjct: 183 EGL-----IAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFK 347
Query: 255 KKNKVDISQNPKSLRRLRTACERAKRILSFAFVTTVEVDALFTGIDFCS------SITRA 308
+ +D+S++ +L+RLR A E+AK + + + E++ F D ++TR+
Sbjct: 348 RTESIDLSKDKLALQRLREAAEKAK--IELSSTSQTEINLPFITADASGAKHLNITLTRS 521
Query: 309 KFEELNMDFFNECMNIVDTCLRDSKIYKNDIDDVVLVGGSSRIPKVQEQLLEYFKGKELF 368
KFE L CL+D+ I ++D+V+LVGG +R+PKVQE + F GK
Sbjct: 522 KFEALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIF-GKSPS 698
Query: 369 MGINPDEAVAYGAAVQAAILSEGCKNVPNLVLRDVTPLSLGISVSIEHIMSVVIPRNTSI 428
G+NPDEAVA GAA+Q IL +V L+L DVTPLSLGI ++ I + +I RNT+I
Sbjct: 699 KGVNPDEAVAMGAAIQGGILR---GDVKELLLLDVTPLSLGIE-TLGGIFTRLINRNTTI 866
Query: 429 PVKKTSRYSTLYDNQCLVNFLVYEGERPRAADNNLLGSFGLRCL-PGPRGQP-LEVCFSI 486
P KK+ +ST DNQ V V +GER A+DN LG F L + P PRG P +EV F I
Sbjct: 867 PTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTFDI 1046
Query: 487 DENGILTVTAREISTGNMNMITI 509
D NGI+TV+A++ STG ITI
Sbjct: 1047DANGIVTVSAKDKSTGKEQQITI 1115
Score = 34.3 bits (77), Expect(2) = 3e-91
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +2
Query: 516 LSMFDIEKMIKEAEKYHVEDMQFLRRAKVMCELDSCVYNMKKALKKKDVNLILSPQEIAK 575
LS +IEKM+KEAE + +D + + D+ +Y+++K+L + + P E+AK
Sbjct: 1133 LSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEKSLGEYRDKI---PSEVAK 1303
Query: 576 -INNAITVAMDLLDKNKKEKEIDVLEGYLEELERMSKHL 613
I +A++ + + ++ L+ + + ++ +H+
Sbjct: 1304 EIEDAVSELRTAMSGDNADEIKSKLDAANKAVSKIGEHM 1420
>BP040870
Length = 505
Score = 259 bits (663), Expect = 7e-70
Identities = 126/167 (75%), Positives = 148/167 (88%)
Frame = +2
Query: 111 VKYKGQEKHFCAEEISSMVLTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTI 170
V YKG+EK F AEEISSMVL KM+E+AEAYLG+ +KNAVVTVPAYFNDSQR+AT DAG I
Sbjct: 5 VNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI 184
Query: 171 AGLNVIRIINEPTAAAIAYGLDKRNDCDGSRNIFVFDLGGGTFDVSILTIKGDVFEVKAT 230
+GLNV+RIINEPTAAAIAYGLDK+ G +N+ +FDLGGGTFDVS+LTI+ +FEVK+T
Sbjct: 185 SGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKST 364
Query: 231 AGNTHLGGEDFDNRMVNYFVEELKKKNKVDISQNPKSLRRLRTACER 277
AG+THLGGEDFDNRMVN+FV+E K+KNK DIS N ++LRRLRTACER
Sbjct: 365 AGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACER 505
>BP044919
Length = 519
Score = 253 bits (645), Expect = 8e-68
Identities = 123/164 (75%), Positives = 144/164 (87%)
Frame = +3
Query: 80 GRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYKGQEKHFCAEEISSMVLTKMREVAEA 139
GRK+SD V+Q D+ LWPFKVI+G +DKPMI VK+KG+EK EEISSMVL+KM+E+AEA
Sbjct: 27 GRKYSDSVIQEDVKLWPFKVIAGTDDKPMIVVKHKGEEKKLVPEEISSMVLSKMKEIAEA 206
Query: 140 YLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPTAAAIAYGLDKRNDCDG 199
+L S VKNAVVTVPAYFND+QRKAT DAGTIAGLNV+RIINEPTAAA+AYGL KR + G
Sbjct: 207 FLESSVKNAVVTVPAYFNDAQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRANLVG 386
Query: 200 SRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDN 243
RN+F+FDLGGGTFDVS+LTIK D FEVKAT+G+THLG +DFDN
Sbjct: 387 ERNVFIFDLGGGTFDVSLLTIKDDNFEVKATSGDTHLGXKDFDN 518
>BP041494
Length = 572
Score = 171 bits (434), Expect(2) = 2e-63
Identities = 87/110 (79%), Positives = 94/110 (85%)
Frame = +3
Query: 74 DAKRLIGRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYKGQEKHFCAEEISSMVLTKM 133
DAKRLIGRKFSD V+ D+ LWPFKVISG D+PMI V YK +EK F AEEISSMVL KM
Sbjct: 243 DAKRLIGRKFSDDSVESDMKLWPFKVISGPVDRPMIVVNYKNEEKQFTAEEISSMVLIKM 422
Query: 134 REVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPT 183
RE+AEAYLGS VKN VVTVPAYFNDSQR+AT DAG IAGLNV+RIINEPT
Sbjct: 423 REIAEAYLGSTVKNVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT 572
Score = 88.6 bits (218), Expect(2) = 2e-63
Identities = 45/63 (71%), Positives = 50/63 (78%)
Frame = +1
Query: 1 MAKEYEGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRITPSFVAFNNEQRLIGDAA 60
M E E A+GIDLGTTYSCV VW Q+ RVEII NDQGNR TPS+VAF + +RLIGDAA
Sbjct: 61 MVGEGESPAIGIDLGTTYSCVGVW--QNDRVEIIPNDQGNRTTPSYVAFTDFERLIGDAA 234
Query: 61 KNQ 63
KNQ
Sbjct: 235 KNQ 243
>TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment), partial
(63%)
Length = 981
Score = 226 bits (577), Expect = 6e-60
Identities = 119/178 (66%), Positives = 142/178 (78%), Gaps = 1/178 (0%)
Frame = +1
Query: 7 GRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRITPSFVAFNNEQRLIGDAAKNQSAT 66
G +GIDLGTTYSCV V+ + H VEII NDQGNRITPS+VAFN+ +RLIG+AAKNQ A
Sbjct: 145 GTVIGIDLGTTYSCVGVYRNGH--VEIIANDQGNRITPSWVAFNDGERLIGEAAKNQFAV 318
Query: 67 NPENTIFDAKRLIGRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYK-GQEKHFCAEEI 125
NPE TIFD KRLIGRKF D VQRD+ L P+K+++ + KP I VK K G+ K F EE+
Sbjct: 319 NPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVN-KDGKPYIQVKIKDGETKVFSPEEV 495
Query: 126 SSMVLTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPT 183
S+M+LTKM+E AEA+LG + +AVVTVPAYFND+QR+AT DAG IAGLNV RIINEPT
Sbjct: 496 SAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPT 669
Score = 127 bits (318), Expect = 7e-30
Identities = 66/111 (59%), Positives = 83/111 (74%)
Frame = +2
Query: 173 LNVIRIINEPTAAAIAYGLDKRNDCDGSRNIFVFDLGGGTFDVSILTIKGDVFEVKATAG 232
L ++ + P AAAIAYGLDK+ G +NI VFDLGGGTFDVSILTI VFEV AT G
Sbjct: 638 LMLLELSMNPPAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLATNG 808
Query: 233 NTHLGGEDFDNRMVNYFVEELKKKNKVDISQNPKSLRRLRTACERAKRILS 283
+THLGGEDFD R++ YF++ +KKK+ DIS++ ++L +LR ERAKR LS
Sbjct: 809 DTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 961
>TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat shock
cognate protein 70, partial (23%)
Length = 508
Score = 217 bits (552), Expect = 5e-57
Identities = 111/152 (73%), Positives = 124/152 (81%)
Frame = +2
Query: 1 MAKEYEGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRITPSFVAFNNEQRLIGDAA 60
MA + EG A+GIDLGTTYSCV VW QH RVEII NDQGNR TPS+VAF + +RLIGDAA
Sbjct: 59 MAGKGEGPAIGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAA 232
Query: 61 KNQSATNPENTIFDAKRLIGRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYKGQEKHF 120
KNQ A NP NT+FDAKRLIGR+ SD VQ D+ LWPFKV SG +KPMI V YKG++K F
Sbjct: 233 KNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQF 412
Query: 121 CAEEISSMVLTKMREVAEAYLGSPVKNAVVTV 152
AEEISSMVL KMRE+AEAYLGS +KNAVVTV
Sbjct: 413 AAEEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
>AW720237
Length = 459
Score = 199 bits (506), Expect = 1e-51
Identities = 97/144 (67%), Positives = 115/144 (79%)
Frame = +3
Query: 6 EGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRITPSFVAFNNEQRLIGDAAKNQSA 65
+ A+GIDLGTTYSCV VW++ RVEII NDQGNR TPS+V F +RLIGDAAKNQ A
Sbjct: 33 QATAIGIDLGTTYSCVGVWMND--RVEIIANDQGNRTTPSYVGFTESERLIGDAAKNQVA 206
Query: 66 TNPENTIFDAKRLIGRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYKGQEKHFCAEEI 125
NP NT+FDAKRLIGRKF DP+VQ+DI LWPFKV +G + KP+I VKYKG+ K F AE++
Sbjct: 207 RNPINTVFDAKRLIGRKFDDPIVQKDIKLWPFKVEAGPDGKPLIAVKYKGETKKFHAEQV 386
Query: 126 SSMVLTKMREVAEAYLGSPVKNAV 149
SSMVLTKM+E AEAYL +K+ V
Sbjct: 387 SSMVLTKMKETAEAYLNKTIKDIV 458
>BP064075
Length = 554
Score = 166 bits (419), Expect = 1e-41
Identities = 90/158 (56%), Positives = 119/158 (74%), Gaps = 3/158 (1%)
Frame = -2
Query: 289 TVEVDALFTGIDFCSSITRAKFEELNMDFFNECMNIVDTCLRDSKIYKNDIDDVVLVGGS 348
T+E+D L+ GIDF SSITRAKFEELN D+F +CM +V+ C+ DSK+ K++I DVVLVGGS
Sbjct: 553 TIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGS 374
Query: 349 SRIPKVQEQLLEYFKGKELFMGINPDEAVAYGAAVQAAILS-EGCKNVPNLVLRDVTPLS 407
SRIPKV++ L+++F K+L INPDEAVA+GAAV A+ILS E + V +L+LR+VTPLS
Sbjct: 373 SRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLS 194
Query: 408 LGISVSIEH--IMSVVIPRNTSIPVKKTSRYSTLYDNQ 443
LG+ +H IM +IPRNT IP ++T + NQ
Sbjct: 193 LGLE---KHGGIMETIIPRNTMIPTTMDHVFTTHFHNQ 89
>TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, partial
(24%)
Length = 476
Score = 146 bits (369), Expect = 8e-36
Identities = 83/159 (52%), Positives = 108/159 (67%), Gaps = 3/159 (1%)
Frame = +3
Query: 346 GGSSRIPKVQEQLLEYFKGKELFMGINPDEAVAYGAAVQAAILS-EGCKNVPNLVLRDVT 404
GGS+RIPKVQ+ L +YF+GKE G+NPDEAVAYGAAVQ +ILS EG + +++L DV
Sbjct: 3 GGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVA 182
Query: 405 PLSLGISVSIEHIMSVVIPRNTSIPVKKTSRYSTLYDNQCLVNFLVYEGERPRAADNNLL 464
PL+LGI ++ +M+ +IPRNT IP KK+ ++T D Q V+ V+EGER D LL
Sbjct: 183 PLTLGIE-TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLL 359
Query: 465 GSFGLRCL-PGPRGQP-LEVCFSIDENGILTVTAREIST 501
G F L + P PRG P +EV F +D NGIL V A + T
Sbjct: 360 GKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGT 476
>AV769455
Length = 556
Score = 127 bits (318), Expect = 7e-30
Identities = 67/184 (36%), Positives = 109/184 (58%), Gaps = 1/184 (0%)
Frame = +1
Query: 56 IGDAAKNQSATNPENTIFDAKRLIGRKFSDPVVQRDILLWPFKVISGVNDKPMITVKYKG 115
+G A + + NP+N+I KRLIGR+F+DP +QRD+ PF V G + P+I +Y G
Sbjct: 4 LGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLG 183
Query: 116 QEKHFCAEEISSMVLTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNV 175
+ + F ++ M+L+ ++E+A+ L + V + + +P YF D QR+A +DA TIAGL+
Sbjct: 184 ETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHP 363
Query: 176 IRIINEPTAAAIAYGLDKRNDCDGS-RNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNT 234
+R+ +E TA A+AYG+ K + + N+ D+G + V I K +V A + +
Sbjct: 364 LRLFHETTATALAYGIYKTDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYDR 543
Query: 235 HLGG 238
LGG
Sbjct: 544 SLGG 555
>BP083571
Length = 423
Score = 119 bits (298), Expect = 1e-27
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 1 MAKEYEGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRITPSFVAFNNEQRLIGDAA 60
MA +YEG A+GIDLGTTYSCVAVW +Q+ R EIIHN+QGNR TPSFVAF + QRLIGDAA
Sbjct: 145 MATKYEGPAIGIDLGTTYSCVAVWQEQNDRAEIIHNEQGNRTTPSFVAFTDTQRLIGDAA 324
Query: 61 KNQSATNPENTI 72
KNQ+ATNP NT+
Sbjct: 325 KNQAATNPTNTV 360
>AV766006
Length = 408
Score = 108 bits (269), Expect = 3e-24
Identities = 59/129 (45%), Positives = 80/129 (61%), Gaps = 2/129 (1%)
Frame = -1
Query: 417 IMSVVIPRNTSIPVKKTSRYSTLYDNQCLVNFLVYEGERPRAADNNLLGSFGLRCLPGP- 475
+MS +I RNT IP +KT ++T D Q V+ VYEGER DN LG F L +P
Sbjct: 399 VMSKIIERNTVIPTRKTQTFTTYQDKQTTVSIQVYEGERAMTKDNRQLGKFDLNGIPAAA 220
Query: 476 RGQP-LEVCFSIDENGILTVTAREISTGNMNMITITNDKERLSMFDIEKMIKEAEKYHVE 534
RG P +EV F +D NGIL V+A + ++ ITITNDK RLS +IE+M+KEAE++
Sbjct: 219 RGTPQIEVTFEVDANGILAVSAEDKASSAKEAITITNDKGRLSKEEIERMVKEAEEFADA 40
Query: 535 DMQFLRRAK 543
D + R+ +
Sbjct: 39 DAEVKRKVE 13
>BP033771
Length = 513
Score = 104 bits (260), Expect = 4e-23
Identities = 57/136 (41%), Positives = 84/136 (60%)
Frame = -2
Query: 479 PLEVCFSIDENGILTVTAREISTGNMNMITITNDKERLSMFDIEKMIKEAEKYHVEDMQF 538
PL VCF +D NGIL V+A E +TG N IT+TND RLS I ++I+EAEK+ ED +
Sbjct: 512 PLNVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMY 333
Query: 539 LRRAKVMCELDSCVYNMKKALKKKDVNLILSPQEIAKINNAITVAMDLLDKNKKEKEIDV 598
++ + M LD VY ++ A+K D + L PQ+ +KI A+T A +LL + E +V
Sbjct: 332 EKKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLLG-TSDQTETEV 156
Query: 599 LEGYLEELERMSKHLI 614
E YL E+E + + ++
Sbjct: 155 FEDYLNEMEGIVEPIV 108
>CB827219
Length = 544
Score = 101 bits (252), Expect = 3e-22
Identities = 62/173 (35%), Positives = 98/173 (55%)
Frame = +3
Query: 199 GSRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELKKKNK 258
G R + F++G G DV++ G V ++KA AG+T +GGED M+++ + + + K
Sbjct: 30 GVRKLLYFNMGAGYCDVAVTVTAGGVSQIKALAGST-IGGEDLLQNMMHHLLPDCENIFK 206
Query: 259 VDISQNPKSLRRLRTACERAKRILSFAFVTTVEVDALFTGIDFCSSITRAKFEELNMDFF 318
+ KS+ LR A A LS V+VD L G+ I +FEE+N + F
Sbjct: 207 NHGVKEIKSMGLLRVATLDAIHRLSSQKSVQVDVD-LGDGLKINKVIDCEEFEEVNKNVF 383
Query: 319 NECMNIVDTCLRDSKIYKNDIDDVVLVGGSSRIPKVQEQLLEYFKGKELFMGI 371
+C +++ CL+DSKI D++DV++VGG S IP+V+ + KGK+L+ GI
Sbjct: 384 EKCESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKKLYEGI 542
>AW163930
Length = 359
Score = 100 bits (250), Expect = 5e-22
Identities = 58/94 (61%), Positives = 69/94 (72%), Gaps = 1/94 (1%)
Frame = +1
Query: 361 YFKGKELFMGINPDEAVAYGAAVQAAILS-EGCKNVPNLVLRDVTPLSLGISVSIEHIMS 419
+F GKEL INPDEAVAYGAAVQAAILS EG + V +L+L DVTPLSLG+ + +M+
Sbjct: 40 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETA-GGVMT 216
Query: 420 VVIPRNTSIPVKKTSRYSTLYDNQCLVNFLVYEG 453
V+IPRNT+IP KK +ST DNQ V VYEG
Sbjct: 217 VLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG 318
>TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein 70
(Fragment), partial (48%)
Length = 746
Score = 78.6 bits (192), Expect = 3e-15
Identities = 53/170 (31%), Positives = 85/170 (49%), Gaps = 2/170 (1%)
Frame = +1
Query: 441 DNQCLVNFLVYEGERPRAADNNLLGSFGLRCL-PGPRGQP-LEVCFSIDENGILTVTARE 498
DNQ V VYEGE +A N LG F L P P+G + VCF +D +GI+ V+A +
Sbjct: 1 DNQTSVWIKVYEGEGAKADKNFFLGKFELSGFSPAPKGDTEINVCFDVDADGIVEVSAED 180
Query: 499 ISTGNMNMITITNDKERLSMFDIEKMIKEAEKYHVEDMQFLRRAKVMCELDSCVYNMKKA 558
+S ITITN RLS ++ +M+++A +Y ED + ++ K L++ Y +
Sbjct: 181 MSLRLKKTITITNRLGRLSQEEMSRMVRDAAQYKAEDEEVRKKVKAKNSLENYAYEARDR 360
Query: 559 LKKKDVNLILSPQEIAKINNAITVAMDLLDKNKKEKEIDVLEGYLEELER 608
+K K+ + ++ LD+N+ E + E +ELE+
Sbjct: 361 VK--------------KLEKMVEEVIEWLDRNQL-AEAEEFEYKKQELEK 465
>AV409958
Length = 389
Score = 76.3 bits (186), Expect = 1e-14
Identities = 44/126 (34%), Positives = 74/126 (57%), Gaps = 4/126 (3%)
Frame = +2
Query: 245 MVNYFVEELKKKNKVDISQNPKSLRRLRTACERAKRILSFAFVTTVEVDALFTGID---- 300
+V++ + K+ +D+ ++ ++L+RL E+AK LS T + + + D
Sbjct: 5 IVDWLAADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKH 184
Query: 301 FCSSITRAKFEELNMDFFNECMNIVDTCLRDSKIYKNDIDDVVLVGGSSRIPKVQEQLLE 360
+++TRAKFEEL D + V+ LRD+K+ D+D+V+LVGGS+RIP VQE L++
Sbjct: 185 IETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLSFKDLDEVILVGGSTRIPAVQE-LVK 361
Query: 361 YFKGKE 366
GK+
Sbjct: 362 KMTGKD 379
>AW428869
Length = 181
Score = 72.8 bits (177), Expect = 2e-13
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +1
Query: 200 SRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELKK 255
S I VFDLGGGTFDVS+L + VFEV +T+G+THLGG+DFD R+V++ + K+
Sbjct: 13 SETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAADFKR 180
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.137 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,734,262
Number of Sequences: 28460
Number of extensions: 102766
Number of successful extensions: 448
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of query: 624
length of database: 4,897,600
effective HSP length: 96
effective length of query: 528
effective length of database: 2,165,440
effective search space: 1143352320
effective search space used: 1143352320
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144722.2