BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144722.12 + phase: 0
(627 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%) 497 e-141
TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%) 469 e-134
TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa pro... 333 1e-95
BP040870 260 5e-70
BP044919 259 9e-70
BP041494 165 1e-62
TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment),... 212 2e-55
TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat... 204 5e-53
BP064075 187 6e-48
AW720237 186 1e-47
TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, p... 166 8e-42
BP033771 144 6e-35
BP083571 135 2e-32
AV766006 131 4e-31
AW163930 127 4e-30
AV769455 121 3e-28
AV776687 110 5e-25
TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein ... 104 4e-23
CB827219 96 2e-20
BP058182 91 6e-19
>TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%)
Length = 1570
Score = 497 bits (1279), Expect = e-141
Identities = 256/407 (62%), Positives = 318/407 (77%), Gaps = 3/407 (0%)
Frame = +1
Query: 215 VSVLTIKNNAFDVKATAGDTHLGGEDFDHRMVNHFVKEFKRKHSKDISGNSRALRRLRTA 274
VS+LTI+ F+VKATAGDTHLGGEDFD+RMVNHFV+EFKRK+ KDISGN RALRRLRTA
Sbjct: 1 VSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTA 180
Query: 275 CERAKRTLSFDTEATIDIDAISEGIDFCSSITRAKFEQLNMDLFEKCMETVERCLTDAEM 334
CERAKRTLS + TI+ID++ EGIDF S ITRA+FE++NMDLF KCME VE+CL DA+M
Sbjct: 181 CERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKM 360
Query: 335 DKKTVDDVVLVGGSSRIPKVKQLLQDFFNGKDLCMSINPDEAVAYGAAVQAALL-GEGIK 393
DK++V DVVLVGGS+RIPKV+QLLQDFFNGK+LC SINPDEAVAYGAAVQAA+L GEG +
Sbjct: 361 DKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE 540
Query: 394 SVPNLVLRDVTPLSLGISIKGDVMSVLIPRNSIIPVKKKQVYHTCDDDQPGVSVDVYEGE 453
V +L+L DVTPLSLG+ G VM+VLIPRN+ IP KK+QV+ T D+QPGV + V+EGE
Sbjct: 541 KVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGE 720
Query: 454 RSVASENNLLGLFELK-VPLAPRGLP-IQVCFAIDADGILNVSAEEETSGNKKDITITKE 511
R+ +NNLLG FEL +P APRG+P I VCF IDA+GILNVSAE++T+G K ITIT +
Sbjct: 721 RTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITND 900
Query: 512 NGRLSTEEIERMIQEAENFKEEDLKFKKKVKAMNVLDDYLYNMRKVMKDGSVTSMLTSTD 571
GRLS ++IE+M+QEAE +K ED + KKKV+A N L++Y YNMR +KD + L S D
Sbjct: 901 KGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIAGKLDSAD 1080
Query: 572 KMKLNAAMIKGKNLIDDKEQHETFVFVDFLKELEKIFESALNKINKG 618
K K+ A+ + ++ + E F D +KELE I + K+ +G
Sbjct: 1081KTKIEDAIEQAIQWLESNQLAEADEFEDKMKELESICNPIIAKMYQG 1221
>TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%)
Length = 1528
Score = 469 bits (1207), Expect(2) = e-134
Identities = 244/385 (63%), Positives = 298/385 (77%), Gaps = 3/385 (0%)
Frame = +3
Query: 237 GGEDFDHRMVNHFVKEFKRKHSKDISGNSRALRRLRTACERAKRTLSFDTEATIDIDAIS 296
GGEDFD+RMVNHFV+EFKRK+ KDISGN RALRRLRTACERAKRTLS + TI+ID++
Sbjct: 48 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY 227
Query: 297 EGIDFCSSITRAKFEQLNMDLFEKCMETVERCLTDAEMDKKTVDDVVLVGGSSRIPKVKQ 356
EGIDF S ITRA+FE+LNMDLF KCME VE+CL DA+MDKK+V DVVLVGGS+RIPKV+Q
Sbjct: 228 EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQ 407
Query: 357 LLQDFFNGKDLCMSINPDEAVAYGAAVQAALL-GEGIKSVPNLVLRDVTPLSLGISIKGD 415
LLQDFFNGK+LC SINPDEAVAYGAAVQAA+L GEG + V +L+L DVTPLSLG+ G
Sbjct: 408 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 587
Query: 416 VMSVLIPRNSIIPVKKKQVYHTCDDDQPGVSVDVYEGERSVASENNLLGLFELK-VPLAP 474
VM+VLIPRN+ IP KK+QV+ T D+QPGV + VYEGER+ +NNLLG FEL +P AP
Sbjct: 588 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 767
Query: 475 RGLP-IQVCFAIDADGILNVSAEEETSGNKKDITITKENGRLSTEEIERMIQEAENFKEE 533
RG+P I VCF IDA+GILNVSAE++T+G K ITIT + GRLS E+IE+M+QEAE +K E
Sbjct: 768 RGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSE 947
Query: 534 DLKFKKKVKAMNVLDDYLYNMRKVMKDGSVTSMLTSTDKMKLNAAMIKGKNLIDDKEQHE 593
D + KKKV+A N L++Y YNMR +KD + L DK K+ A+ + +D + E
Sbjct: 948 DEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLDSNQLAE 1127
Query: 594 TFVFVDFLKELEKIFESALNKINKG 618
F D +KELE I + K+ +G
Sbjct: 1128ADEFEDKMKELESICNPIIAKMYQG 1202
Score = 27.3 bits (59), Expect(2) = e-134
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +1
Query: 225 FDVKATAGDTHL 236
F+VKATAGDTHL
Sbjct: 13 FEVKATAGDTHL 48
>TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (74%)
Length = 1752
Score = 333 bits (855), Expect(2) = 1e-95
Identities = 190/380 (50%), Positives = 254/380 (66%), Gaps = 6/380 (1%)
Frame = +3
Query: 135 EIAEKFLESKVKDAVITVPAYFNDSQRKATKDAGVISGLNVIRIINEPTAAALAYGLQKR 194
E AE +L V AVITVPAYFND+ R+ATKDAG I+GL+V RIINEPTAAAL+YG+ +
Sbjct: 3 ETAEAYLGKSVSKAVITVPAYFNDAHRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNK 182
Query: 195 ANCVENRNIFIFDLGGGTFDVSVLTIKNNAFDVKATAGDTHLGGEDFDHRMVNHFVKEFK 254
+ +FDLGGGTFDVS+L I N F+VKAT GDT LGGEDFD+ +++ V EFK
Sbjct: 183 EGLIA-----VFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFK 347
Query: 255 RKHSKDISGNSRALRRLRTACERAKRTLSFDTEATIDIDAISEGIDFCS----SITRAKF 310
R S D+S + AL+RLR A E+AK LS ++ I++ I+ ++TR+KF
Sbjct: 348 RTESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKF 527
Query: 311 EQLNMDLFEKCMETVERCLTDAEMDKKTVDDVVLVGGSSRIPKVKQLLQDFFNGKDLCMS 370
E L L E+ + CL DA + K VD+V+LVGG +R+PKV++++ F GK
Sbjct: 528 EALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIF-GKSPSKG 704
Query: 371 INPDEAVAYGAAVQAALLGEGIKSVPNLVLRDVTPLSLGISIKGDVMSVLIPRNSIIPVK 430
+NPDEAVA GAA+Q +L +K L+L DVTPLSLGI G + + LI RN+ IP K
Sbjct: 705 VNPDEAVAMGAAIQGGILRGDVK---ELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTK 875
Query: 431 KKQVYHTCDDDQPGVSVDVYEGERSVASENNLLGLFEL-KVPLAPRGLP-IQVCFAIDAD 488
K QV+ T D+Q V + V +GER +AS+N LG FEL +P APRGLP I+V F IDA+
Sbjct: 876 KSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTFDIDAN 1055
Query: 489 GILNVSAEEETSGNKKDITI 508
GI+ VSA+++++G ++ ITI
Sbjct: 1056GIVTVSAKDKSTGKEQQITI 1115
Score = 34.3 bits (77), Expect(2) = 1e-95
Identities = 16/45 (35%), Positives = 28/45 (61%)
Frame = +2
Query: 512 NGRLSTEEIERMIQEAENFKEEDLKFKKKVKAMNVLDDYLYNMRK 556
+G LS +EIE+M++EAE ++D + K + N D +Y++ K
Sbjct: 1124 SGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEK 1258
>BP040870
Length = 505
Score = 260 bits (664), Expect = 5e-70
Identities = 127/167 (76%), Positives = 149/167 (89%)
Frame = +2
Query: 111 VHFKEEEKHFVAEEISSMILAKMKEIAEKFLESKVKDAVITVPAYFNDSQRKATKDAGVI 170
V++K EEK F AEEISSM+L KMKEIAE +L + +K+AV+TVPAYFNDSQR+ATKDAGVI
Sbjct: 5 VNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI 184
Query: 171 SGLNVIRIINEPTAAALAYGLQKRANCVENRNIFIFDLGGGTFDVSVLTIKNNAFDVKAT 230
SGLNV+RIINEPTAAA+AYGL K+A +N+ IFDLGGGTFDVS+LTI+ F+VK+T
Sbjct: 185 SGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKST 364
Query: 231 AGDTHLGGEDFDHRMVNHFVKEFKRKHSKDISGNSRALRRLRTACER 277
AGDTHLGGEDFD+RMVNHFV+EFKRK+ KDISGN+RALRRLRTACER
Sbjct: 365 AGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACER 505
>BP044919
Length = 519
Score = 259 bits (662), Expect = 9e-70
Identities = 128/164 (78%), Positives = 148/164 (90%)
Frame = +3
Query: 80 GRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKEEEKHFVAEEISSMILAKMKEIAEK 139
GRKYSDSVI+ D++LWPFKVIAGT+D P+IVV K EEK V EEISSM+L+KMKEIAE
Sbjct: 27 GRKYSDSVIQEDVKLWPFKVIAGTDDKPMIVVKHKGEEKKLVPEEISSMVLSKMKEIAEA 206
Query: 140 FLESKVKDAVITVPAYFNDSQRKATKDAGVISGLNVIRIINEPTAAALAYGLQKRANCVE 199
FLES VK+AV+TVPAYFND+QRKATKDAG I+GLNV+RIINEPTAAALAYGLQKRAN V
Sbjct: 207 FLESSVKNAVVTVPAYFNDAQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRANLVG 386
Query: 200 NRNIFIFDLGGGTFDVSVLTIKNNAFDVKATAGDTHLGGEDFDH 243
RN+FIFDLGGGTFDVS+LTIK++ F+VKAT+GDTHLG +DFD+
Sbjct: 387 ERNVFIFDLGGGTFDVSLLTIKDDNFEVKATSGDTHLGXKDFDN 518
>BP041494
Length = 572
Score = 165 bits (417), Expect(2) = 1e-62
Identities = 79/110 (71%), Positives = 97/110 (87%)
Frame = +3
Query: 74 DAKRLIGRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKEEEKHFVAEEISSMILAKM 133
DAKRLIGRK+SD +++D++LWPFKVI+G D P+IVV++K EEK F AEEISSM+L KM
Sbjct: 243 DAKRLIGRKFSDDSVESDMKLWPFKVISGPVDRPMIVVNYKNEEKQFTAEEISSMVLIKM 422
Query: 134 KEIAEKFLESKVKDAVITVPAYFNDSQRKATKDAGVISGLNVIRIINEPT 183
+EIAE +L S VK+ V+TVPAYFNDSQR+ATKDAGVI+GLNV+RIINEPT
Sbjct: 423 REIAEAYLGSTVKNVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT 572
Score = 92.8 bits (229), Expect(2) = 1e-62
Identities = 47/66 (71%), Positives = 53/66 (80%)
Frame = +1
Query: 1 MAKKYEGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFSGDQRLIGDAA 60
M + E PAIGIDLGTTYSCV VWQ N+R EII N+QGNRTTPS+VAF+ +RLIGDAA
Sbjct: 61 MVGEGESPAIGIDLGTTYSCVGVWQ--NDRVEIIPNDQGNRTTPSYVAFTDFERLIGDAA 234
Query: 61 KNQAAS 66
KNQ S
Sbjct: 235 KNQMRS 252
>TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment), partial
(63%)
Length = 981
Score = 212 bits (539), Expect = 2e-55
Identities = 110/178 (61%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Frame = +1
Query: 7 GPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFSGDQRLIGDAAKNQAAS 66
G IGIDLGTTYSCV V++ N EII N+QGNR TPS+VAF+ +RLIG+AAKNQ A
Sbjct: 145 GTVIGIDLGTTYSCVGVYR--NGHVEIIANDQGNRITPSWVAFNDGERLIGEAAKNQFAV 318
Query: 67 NPANTVFDAKRLIGRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKE-EEKHFVAEEI 125
NP T+FD KRLIGRK+ D ++ D++L P+K++ + P I V K+ E K F EE+
Sbjct: 319 NPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIV-NKDGKPYIQVKIKDGETKVFSPEEV 495
Query: 126 SSMILAKMKEIAEKFLESKVKDAVITVPAYFNDSQRKATKDAGVISGLNVIRIINEPT 183
S+MIL KMKE AE FL K+ DAV+TVPAYFND+QR+ATKDAGVI+GLNV RIINEPT
Sbjct: 496 SAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPT 669
Score = 129 bits (324), Expect = 1e-30
Identities = 64/111 (57%), Positives = 81/111 (72%)
Frame = +2
Query: 173 LNVIRIINEPTAAALAYGLQKRANCVENRNIFIFDLGGGTFDVSVLTIKNNAFDVKATAG 232
L ++ + P AAA+AYGL K+ +NI +FDLGGGTFDVS+LTI N F+V AT G
Sbjct: 638 LMLLELSMNPPAAAIAYGLDKKGG---EKNILVFDLGGGTFDVSILTIDNGVFEVLATNG 808
Query: 233 DTHLGGEDFDHRMVNHFVKEFKRKHSKDISGNSRALRRLRTACERAKRTLS 283
DTHLGGEDFD R++ +F+K K+KH KDIS ++RAL +LR ERAKR LS
Sbjct: 809 DTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 961
>TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat shock
cognate protein 70, partial (23%)
Length = 508
Score = 204 bits (518), Expect = 5e-53
Identities = 101/152 (66%), Positives = 125/152 (81%)
Frame = +2
Query: 1 MAKKYEGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFSGDQRLIGDAA 60
MA K EGPAIGIDLGTTYSCV VWQ ++R EII N+QGNRTTPS+VAF+ +RLIGDAA
Sbjct: 59 MAGKGEGPAIGIDLGTTYSCVGVWQ--HDRVEIIANDQGNRTTPSYVAFTDTERLIGDAA 232
Query: 61 KNQAASNPANTVFDAKRLIGRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKEEEKHF 120
KNQ A NP NTVFDAKRLIGR+ SD+ +++D++LWPFKV +G + P+I V +K E+K F
Sbjct: 233 KNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQF 412
Query: 121 VAEEISSMILAKMKEIAEKFLESKVKDAVITV 152
AEEISSM+L KM+EIAE +L S +K+AV+TV
Sbjct: 413 AAEEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
>BP064075
Length = 554
Score = 187 bits (474), Expect = 6e-48
Identities = 94/156 (60%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
Frame = -2
Query: 289 TIDIDAISEGIDFCSSITRAKFEQLNMDLFEKCMETVERCLTDAEMDKKTVDDVVLVGGS 348
TI++D + +GIDF SSITRAKFE+LN D F+KCME VE+C+ D++MDK + DVVLVGGS
Sbjct: 553 TIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGS 374
Query: 349 SRIPKVKQLLQDFFNGKDLCMSINPDEAVAYGAAVQAALL-GEGIKSVPNLVLRDVTPLS 407
SRIPKV+QLL DFF KDLC INPDEAVA+GAAV A++L GE + V +L+LR+VTPLS
Sbjct: 373 SRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLS 194
Query: 408 LGISIKGDVMSVLIPRNSIIPVKKKQVYHTCDDDQP 443
LG+ G +M +IPRN++IP V+ T +QP
Sbjct: 193 LGLEKHGGIMETIIPRNTMIPTTMDHVFTTHFHNQP 86
>AW720237
Length = 459
Score = 186 bits (472), Expect = 1e-47
Identities = 90/144 (62%), Positives = 110/144 (75%)
Frame = +3
Query: 6 EGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFSGDQRLIGDAAKNQAA 65
+ AIGIDLGTTYSCV VW N+R EII N+QGNRTTPS+V F+ +RLIGDAAKNQ A
Sbjct: 33 QATAIGIDLGTTYSCVGVWM--NDRVEIIANDQGNRTTPSYVGFTESERLIGDAAKNQVA 206
Query: 66 SNPANTVFDAKRLIGRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKEEEKHFVAEEI 125
NP NTVFDAKRLIGRK+ D +++ D++LWPFKV AG + P+I V +K E K F AE++
Sbjct: 207 RNPINTVFDAKRLIGRKFDDPIVQKDIKLWPFKVEAGPDGKPLIAVKYKGETKKFHAEQV 386
Query: 126 SSMILAKMKEIAEKFLESKVKDAV 149
SSM+L KMKE AE +L +KD V
Sbjct: 387 SSMVLTKMKETAEAYLNKTIKDIV 458
>TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, partial
(24%)
Length = 476
Score = 166 bits (421), Expect = 8e-42
Identities = 88/156 (56%), Positives = 116/156 (73%), Gaps = 3/156 (1%)
Frame = +3
Query: 346 GGSSRIPKVKQLLQDFFNGKDLCMSINPDEAVAYGAAVQAALL-GEGIKSVPNLVLRDVT 404
GGS+RIPKV+QLL+D+F GK+ +NPDEAVAYGAAVQ ++L GEG + +++L DV
Sbjct: 3 GGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVA 182
Query: 405 PLSLGISIKGDVMSVLIPRNSIIPVKKKQVYHTCDDDQPGVSVDVYEGERSVASENNLLG 464
PL+LGI G VM+ LIPRN++IP KK QV+ T D Q VS+ V+EGERS+ + LLG
Sbjct: 183 PLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLG 362
Query: 465 LFELK-VPLAPRGLP-IQVCFAIDADGILNVSAEEE 498
F+L +P APRG P I+V F +DA+GILNV AE++
Sbjct: 363 KFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDK 470
>BP033771
Length = 513
Score = 144 bits (362), Expect = 6e-35
Identities = 71/132 (53%), Positives = 95/132 (71%)
Frame = -2
Query: 478 PIQVCFAIDADGILNVSAEEETSGNKKDITITKENGRLSTEEIERMIQEAENFKEEDLKF 537
P+ VCF +DA+GILNVSAEEET+G K IT+T +NGRLS+E+I R+IQEAE + ED +
Sbjct: 512 PLNVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMY 333
Query: 538 KKKVKAMNVLDDYLYNMRKVMKDGSVTSMLTSTDKMKLNAAMIKGKNLIDDKEQHETFVF 597
+KKV+AMN LDDY+Y +R +KD +S L DK K+ A+ K +NL+ +Q ET VF
Sbjct: 332 EKKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLLGTSDQTETEVF 153
Query: 598 VDFLKELEKIFE 609
D+L E+E I E
Sbjct: 152 EDYLNEMEGIVE 117
>BP083571
Length = 423
Score = 135 bits (341), Expect = 2e-32
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = +1
Query: 1 MAKKYEGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFSGDQRLIGDAA 60
MA KYEGPAIGIDLGTTYSCVAVWQEQN+RAEIIHNEQGNRTTPSFVAF+ QRLIGDAA
Sbjct: 145 MATKYEGPAIGIDLGTTYSCVAVWQEQNDRAEIIHNEQGNRTTPSFVAFTDTQRLIGDAA 324
Query: 61 KNQAASNPANTV 72
KNQAA+NP NTV
Sbjct: 325 KNQAATNPTNTV 360
>AV766006
Length = 408
Score = 131 bits (329), Expect = 4e-31
Identities = 69/134 (51%), Positives = 93/134 (68%), Gaps = 2/134 (1%)
Frame = -1
Query: 414 GDVMSVLIPRNSIIPVKKKQVYHTCDDDQPGVSVDVYEGERSVASENNLLGLFELK-VPL 472
G VMS +I RN++IP +K Q + T D Q VS+ VYEGER++ +N LG F+L +P
Sbjct: 405 GGVMSKIIERNTVIPTRKTQTFTTYQDKQTTVSIQVYEGERAMTKDNRQLGKFDLNGIPA 226
Query: 473 APRGLP-IQVCFAIDADGILNVSAEEETSGNKKDITITKENGRLSTEEIERMIQEAENFK 531
A RG P I+V F +DA+GIL VSAE++ S K+ ITIT + GRLS EEIERM++EAE F
Sbjct: 225 AARGTPQIEVTFEVDANGILAVSAEDKASSAKEAITITNDKGRLSKEEIERMVKEAEEFA 46
Query: 532 EEDLKFKKKVKAMN 545
+ D + K+KV+ N
Sbjct: 45 DADAEVKRKVEGKN 4
>AW163930
Length = 359
Score = 127 bits (320), Expect = 4e-30
Identities = 65/96 (67%), Positives = 78/96 (80%), Gaps = 1/96 (1%)
Frame = +1
Query: 361 FFNGKDLCMSINPDEAVAYGAAVQAALL-GEGIKSVPNLVLRDVTPLSLGISIKGDVMSV 419
FFNGK+LC SINPDEAVAYGAAVQAA+L GEG + V +L+L DVTPLSLG+ G VM+V
Sbjct: 40 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTV 219
Query: 420 LIPRNSIIPVKKKQVYHTCDDDQPGVSVDVYEGERS 455
LIPRN+ IP KK+QV+ T D+QPGV + VYEG +S
Sbjct: 220 LIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG*KS 327
>AV769455
Length = 556
Score = 121 bits (304), Expect = 3e-28
Identities = 68/185 (36%), Positives = 103/185 (54%), Gaps = 2/185 (1%)
Frame = +1
Query: 56 IGDAAKNQAASNPANTVFDAKRLIGRKYSDSVIKNDLQLWPFKVIAGTEDNPVIVVHFKE 115
+G A + NP N++ KRLIGR+++D ++ DL+ PF V G + P+I +
Sbjct: 4 LGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLG 183
Query: 116 EEKHFVAEEISSMILAKMKEIAEKFLESKVKDAVITVPAYFNDSQRKATKDAGVISGLNV 175
E + F ++ M+L+ +KEIA+K L + V D I +P YF D QR+A DA I+GL+
Sbjct: 184 ETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHP 363
Query: 176 IRIINEPTAAALAYGLQKRANCVEN--RNIFIFDLGGGTFDVSVLTIKNNAFDVKATAGD 233
+R+ +E TA ALAYG+ K + EN N+ D+G + V + K V A + D
Sbjct: 364 LRLFHETTATALAYGIYK-TDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYD 540
Query: 234 THLGG 238
LGG
Sbjct: 541 RSLGG 555
>AV776687
Length = 595
Score = 110 bits (276), Expect = 5e-25
Identities = 52/95 (54%), Positives = 71/95 (74%)
Frame = -1
Query: 533 EDLKFKKKVKAMNVLDDYLYNMRKVMKDGSVTSMLTSTDKMKLNAAMIKGKNLIDDKEQH 592
+D+ FK K KAMN LDDYLYNM K+MKD V+S L ++K+N+A++KGKNL+D ++
Sbjct: 592 DDMMFKNKRKAMNALDDYLYNMNKLMKDTCVSSKLPPKVQVKINSAIVKGKNLLDGGKEQ 413
Query: 593 ETFVFVDFLKELEKIFESALNKINKGYSDEESDSD 627
E FVFVD L+EL+ IFE A+ IN G++ E+SD D
Sbjct: 412 EAFVFVDLLRELKSIFEPAMANINNGWTHEDSDQD 308
>TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein 70
(Fragment), partial (48%)
Length = 746
Score = 104 bits (260), Expect = 4e-23
Identities = 60/122 (49%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
Frame = +1
Query: 440 DDQPGVSVDVYEGERSVASENNLLGLFELK-VPLAPRG-LPIQVCFAIDADGILNVSAEE 497
D+Q V + VYEGE + A +N LG FEL AP+G I VCF +DADGI+ VSAE+
Sbjct: 1 DNQTSVWIKVYEGEGAKADKNFFLGKFELSGFSPAPKGDTEINVCFDVDADGIVEVSAED 180
Query: 498 ETSGNKKDITITKENGRLSTEEIERMIQEAENFKEEDLKFKKKVKAMNVLDDYLYNMRKV 557
+ KK ITIT GRLS EE+ RM+++A +K ED + +KKVKA N L++Y Y R
Sbjct: 181 MSLRLKKTITITNRLGRLSQEEMSRMVRDAAQYKAEDEEVRKKVKAKNSLENYAYEARDR 360
Query: 558 MK 559
+K
Sbjct: 361 VK 366
>CB827219
Length = 544
Score = 95.9 bits (237), Expect = 2e-20
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 201 RNIFIFDLGGGTFDVSVLTIKNNAFDVKATAGDTHLGGEDFDHRMVNHFVKE----FKRK 256
R + F++G G DV+V +KA AG T +GGED M++H + + FK
Sbjct: 36 RKLLYFNMGAGYCDVAVTVTAGGVSQIKALAGST-IGGEDLLQNMMHHLLPDCENIFKNH 212
Query: 257 HSKDISGNSRALRRLRTACERAKRTLSFDTEATIDIDAISEGIDFCSSITRAKFEQLNMD 316
K+I +++ LR A A LS +D+D + +G+ I +FE++N +
Sbjct: 213 GVKEI----KSMGLLRVATLDAIHRLSSQKSVQVDVD-LGDGLKINKVIDCEEFEEVNKN 377
Query: 317 LFEKCMETVERCLTDAEMDKKTVDDVVLVGGSSRIPKVKQLLQDFFNGKDL 367
+FEKC + +CL D++++ + V+DV++VGG S IP+VK L+ + GK L
Sbjct: 378 VFEKCESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKKL 530
>BP058182
Length = 449
Score = 90.9 bits (224), Expect = 6e-19
Identities = 47/87 (54%), Positives = 64/87 (73%)
Frame = -3
Query: 528 ENFKEEDLKFKKKVKAMNVLDDYLYNMRKVMKDGSVTSMLTSTDKMKLNAAMIKGKNLID 587
E+ + +D+KFK KV AMN LD YLY+M K MKD V+S L S + K+N+A++KG +L+D
Sbjct: 447 EDHEVDDMKFKNKVTAMNDLDLYLYDMNKSMKDKCVSSKLPSMVQDKINSAIVKGXSLLD 268
Query: 588 DKEQHETFVFVDFLKELEKIFESALNK 614
D +Q ET VFV+FL EL+ IFE A+ K
Sbjct: 267 DGQQLETSVFVEFLMELKSIFEPAMAK 187
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.134 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,057,998
Number of Sequences: 28460
Number of extensions: 88170
Number of successful extensions: 468
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of query: 627
length of database: 4,897,600
effective HSP length: 96
effective length of query: 531
effective length of database: 2,165,440
effective search space: 1149848640
effective search space used: 1149848640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144722.12