BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144721.6 + phase: 0 /pseudo
(748 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12704 UP|CAE45596 (CAE45596) S-receptor kinase-like protein 3,... 346 9e-96
TC18923 UP|CAE45594 (CAE45594) S-receptor kinase-like protein 1,... 318 2e-87
TC17497 UP|CAE45595 (CAE45595) S-receptor kinase-like protein 2,... 297 5e-81
TC9751 weakly similar to UP|O23743 (O23743) SFR1 protein precurs... 179 1e-45
AV422094 125 2e-29
BP032158 115 2e-26
TC12343 similar to UP|CDK9_SCHPO (Q96WV9) Serine/threonine prote... 111 5e-25
TC11757 UP|Q91W27 (Q91W27) Tuberoinfundibular 39 residue protein... 108 3e-24
TC17753 similar to UP|Q40096 (Q40096) Receptor protein kinase, p... 107 9e-24
TC10873 similar to UP|Q9LDZ5 (Q9LDZ5) F2D10.13 (F5M15.3), partia... 102 2e-22
BP058703 101 4e-22
TC19726 similar to UP|Q9XIS3 (Q9XIS3) Lectin-like protein kinase... 99 3e-21
TC19546 similar to UP|Q40543 (Q40543) Protein-serine/threonine k... 97 7e-21
TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete 97 9e-21
AV411237 97 1e-20
TC19002 weakly similar to UP|Q9XJ10 (Q9XJ10) ESTs C22458(C62866)... 93 1e-19
TC9462 similar to UP|O49840 (O49840) Protein kinase (AT2G02800/T... 92 2e-19
TC20143 similar to UP|Q9LDS6 (Q9LDS6) Serine/threonine kinase-li... 92 2e-19
TC19526 homologue to UP|AAQ96340 (AAQ96340) Protein kinase-like ... 92 4e-19
AI967588 90 1e-18
>TC12704 UP|CAE45596 (CAE45596) S-receptor kinase-like protein 3, complete
Length = 2481
Score = 346 bits (887), Expect = 9e-96
Identities = 210/586 (35%), Positives = 319/586 (53%), Gaps = 38/586 (6%)
Frame = +1
Query: 33 ITSSKSLKDNETITSNNTNFKLGFFSPLNSTNRYLGIWY--INETNNIWIANRDQPLKDS 90
+ +S++D+ET+ S F+ GFF NS RY GIWY I+ +W+ANRD P+++S
Sbjct: 1 MAQKQSIQDDETLVSPEGTFEAGFFRFGNSLRRYFGIWYKSISPRTIVWVANRDAPVQNS 180
Query: 91 NGIVTIHKNGNLVILNKENGSIIWSTSISSPNSINSTAQLVDVGNLILSDINSRST-IWD 149
+ + GNL+IL+ G I+WS++ S QL+D GN ++ D + IW+
Sbjct: 181 TATLKLTDQGNLLILDGLKG-IVWSSNASRTKD-KPLMQLLDSGNFVVKDGDKEENLIWE 354
Query: 150 SFTHPADAAVPTMRIASNKATGKNISFVSRKSENDPSSGHYIGSLERLDAPEVFIWYDKR 209
SF +P D + M+I SN ATG S ++ DP+SG + ++ P++ +
Sbjct: 355 SFDYPGDTFLAGMKIKSNLATGPTSYLTSWRNAEDPASGEFSYHIDTHGYPQLVVTKGAT 534
Query: 210 IHWRTGPWNGTVFLGSPRMLTEYLAGWRFDQDKDGTTYLTYDFAVKAMFGILSLTPNGTL 269
+ R GPW G F G+ + + + + Q D L Y+ A +++ +TP+GT
Sbjct: 535 VTLRAGPWIGNKFSGASGLRLQKILTFSM-QFTDKEVSLEYETANRSIITRTVITPSGTT 711
Query: 270 KLVEFLNNKEFLSL--TVSQNECDFYGKCGPFGNCDISSVPNICSCFKGFEPKNLVEWSS 327
+ + + + + + T ++C +Y CG CD S+ P IC C +GF PK +W+S
Sbjct: 712 QRLLWSDRSQSWEIISTHPMDQCAYYAFCGANSMCDTSNNP-ICDCLEGFTPKFQAQWNS 888
Query: 328 RNWTNGCVRKEGMNLKCEMVKNGSSVVKQDKFLVHPNTKPPDFAER---SDVSRDKCRTD 384
+WT GCV + NL C+ NG D F H + PD + + S D+C T
Sbjct: 889 LDWTGGCVPIK--NLSCQ---NG------DGFPKHTGVQFPDTSSSWYGNSKSLDECGTI 1035
Query: 385 CLANCSCLAYAYDPFIR----CMYWSSELIDLQKFPT--SGVDLFIRVPA-ELEKEKGNK 437
CL NCSC AYAY + C+ W +++D+ + P G ++++RV A EL+ + K
Sbjct: 1036CLQNCSCTAYAYLDNVGGRSVCLNWFGDILDMSEHPDPDQGQEIYLRVVASELDHRRNKK 1215
Query: 438 SFLIIAIAGGL-GAFILVICAYLLW--------RKWSARHTE--------------QKEM 474
S I +AG L G+ +IC +L RK + R E + +
Sbjct: 1216SINIKKLAGSLAGSIAFIICITILGLATVTCIRRKKNEREDEGGIETRIINHWKDKRGDE 1395
Query: 475 KLDELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEE 534
+D ++DF + + TN F SN LG+GGFGPVYKG+L +GQE+AVKRLS +SGQG+EE
Sbjct: 1396DIDLATIFDFSTISSTTNHFSESNKLGEGGFGPVYKGVLANGQEIAVKRLSNTSGQGMEE 1575
Query: 535 FMNEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLF 580
F NEV +I++LQHRNLV+LLGC + E +L+YEFM N+SLD F+F
Sbjct: 1576FKNEVKLIARLQHRNLVKLLGCSIHHDEMLLIYEFMHNRSLDYFIF 1713
Score = 92.0 bits (227), Expect = 3e-19
Identities = 57/140 (40%), Positives = 80/140 (56%), Gaps = 24/140 (17%)
Frame = +1
Query: 602 PEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSF---YHNEDSLS--------------L 644
PEYA+ G FS KSDV+SFGV++LEI+SG++ F +H+ + LS +
Sbjct: 1879 PEYAVHGSFSVKSDVFSFGVIVLEIISGKKIGRFCDPHHHRNLLSHSSNFAVFLIKALRI 2058
Query: 645 VGF-------AWKLWLEENIISLIDREVWDASFESSMLRCIHIGLLCVQELPRDRPNIST 697
F AW+LW+EE + L+D + + + +LR IHI LLCVQ+ P RP++ +
Sbjct: 2059 CMFENVKNRKAWRLWIEERPLELVDELLDGLAIPTEILRYIHIALLCVQQRPEYRPDMLS 2238
Query: 698 VVLMLISEITHLPPPGKVAF 717
VVLML E LP P AF
Sbjct: 2239 VVLMLNGE-KELPKPSLPAF 2295
>TC18923 UP|CAE45594 (CAE45594) S-receptor kinase-like protein 1, complete
Length = 2061
Score = 318 bits (815), Expect = 2e-87
Identities = 236/740 (31%), Positives = 364/740 (48%), Gaps = 27/740 (3%)
Frame = +1
Query: 32 TITSSKSLKDNETITSNNTNFKLGFFSPLNSTNRYLGIWY--INETNNIWIANRDQPLKD 89
T+T ++S++D+ET+ S F+ GFF NS +Y GIWY I+ +W+ANRD P+++
Sbjct: 31 TVTQNQSIQDDETLVSAEGTFEAGFFGLGNSQRQYFGIWYKSISPRTIVWVANRDAPVQN 210
Query: 90 SNGIVTIHKNGNLVILNKENGSIIWSTSISSPNSINSTAQLVDVGNLILSDINSR--STI 147
S + + GNL+IL+ G IIWS++ S + QL+D GNL++ D R + I
Sbjct: 211 STATIKLTDKGNLLILDGSKG-IIWSSN-GSRAAEKPYMQLLDSGNLVVKDGGKRKKNLI 384
Query: 148 WDSFTHPADAAVPTMRIASNKATGKNISFVSRKSENDPSSGHYIGSLERLDAPEVFIWYD 207
W+SF +P D + M+I SN G S ++ DP+SG + ++ P++ I +
Sbjct: 385 WESFDYPGDTLLAGMKIKSNLVKGPTSYLTSWRNTEDPASGEFSYLIDTRGFPQLVITRN 564
Query: 208 KRIHWRTGPWNGTVFLGSPRMLTEYLAGWRFDQDKDGTTYLTYDFAVKAMFGILSLTPNG 267
++R GPW G +F GS + + + Q L Y+ A +++ + P+G
Sbjct: 565 ATAYYRAGPWTGKLFSGSSWLRLRKILTFSM-QFTSQEISLEYETANRSIITRAVINPSG 741
Query: 268 TLKLVEFLNNKEFLSL--TVSQNECDFYGKCGPFGNCDISSVPNICSCFKGFEPKNLVEW 325
T + + + + + + T ++C +YG CG CDIS+ P IC C +GF PK +W
Sbjct: 742 TTQRLLWSDRSQSWEIISTHPTDQCTYYGLCGANSMCDISNNP-ICHCLEGFRPKFQAKW 918
Query: 326 SSRNWTNGCVRKEGMNLKCEMVKNGSSVVKQDKFLVHPNTKPPDFAER---SDVSRDKCR 382
+S +W GCV + NL C+ NG D FL H K PD + + S D+C
Sbjct: 919 NSFDWPGGCVPMK--NLSCQ---NG------DGFLKHTGVKLPDTSSSWYGKNKSLDECG 1065
Query: 383 TDCLANCSCLAYAY-DPFI---RCMYWSSELIDLQKFPT--SGVDLFIRVPA-ELEKEKG 435
T CL NCSC +YAY D I C+ W +++DL P G +++I+V A EL+ +
Sbjct: 1066TLCLQNCSCTSYAYLDNDIGGSACLIWFGDILDLSIHPNPDQGQEIYIKVVASELDHRRN 1245
Query: 436 NKSFLIIAIAGGL-GAFILVICAYLLWRKWSARHTEQKEMKLD----ELPLYDFVKLENA 490
KSF+ +AG L G LVIC +L S +K + D L D+ K
Sbjct: 1246KKSFMTKKLAGSLAGIVALVICIIILGLATSTCIQRKKNERGDGDSTRSKLLDWNKRLQI 1425
Query: 491 TNSFHNSNMLGKGGFGPVYKGIL---EDGQEVAVKRLSKSSGQGIEEFMNEVAVISKLQH 547
+ + +G+L +D + + R K+S ++ MN K+
Sbjct: 1426IDG--------------IARGLLYLHQDSRLRIIHRDLKTSNILLDNEMN-----PKISD 1548
Query: 548 RNLVRL-LGCCVERGEQ--MLVYEFMPNKSLDAFLFG*NC*RRRR**NKHK*GCWNLPEY 604
L R+ +G VE + M Y +MP PEY
Sbjct: 1549FGLARIFIGDQVEARTKRVMGTYGYMP------------------------------PEY 1638
Query: 605 AMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLIDRE 664
A+ G FS KSDV+SFGV++LEI+SG++ FY L+L+ AW+LW+E + + L+D+
Sbjct: 1639AVHGSFSIKSDVFSFGVIVLEIISGKKIRKFYDPHHHLNLLSHAWRLWIEGSPLELVDKL 1818
Query: 665 VWDASFESSMLRCIHIGLLCVQELPRDRPNISTVVLMLISEITHLPPPGKVAFVHKKNSK 724
D+ + +LR IH+ LLCVQ P RP++ ++VLML E LP P AF K
Sbjct: 1819FEDSIIPTEILRYIHVALLCVQRRPETRPDMLSIVLMLNGE-KELPKPSLPAFY---TGK 1986
Query: 725 SGESSQKSQQSNSNNSVTLS 744
+S + SVT+S
Sbjct: 1987HDPILLESPSRRCSTSVTIS 2046
>TC17497 UP|CAE45595 (CAE45595) S-receptor kinase-like protein 2, complete
Length = 2946
Score = 297 bits (760), Expect = 5e-81
Identities = 207/621 (33%), Positives = 324/621 (51%), Gaps = 59/621 (9%)
Frame = +1
Query: 1 MAFLIHNTNHFFIITFIIFSTFYSCYS----STNDTIT-------------SSKSLKD-- 41
+A + H+ NH F++ +F + +S + N ++T SSK +
Sbjct: 67 VATVRHHRNHLFLLRSAVFHSIIFSFSYVVCNGNGSLTLEDSSWKSGNYRCSSKKYEQCT 246
Query: 42 -NETITSNNTNFKLGFFSPLNSTNRYLGIWY--INETNNIWIANRDQPLKDSNG--IVTI 96
++ +T ++ F+ GFF N + Y G+WY I+ +W+ANRD PL++S +
Sbjct: 247 LSQGMTVHDGTFEAGFFHFENPQHHYFGVWYKSISPRTIVWVANRDAPLRNSTAPTLKVT 426
Query: 97 HKNGNLVILNKENGSIIWSTSISSPNSINSTAQLVDVGNLILSDINS-RSTIWDSFTHPA 155
HK G+++I + G +IWST+ S QL+D GNL+ D + + IW+SF +P
Sbjct: 427 HK-GSILIRDGAKG-VIWSTNTSRAKE-QPFMQLLDSGNLVAKDGDKGENVIWESFNYPG 597
Query: 156 DAAVPTMRIASNKATGKNISFVSRKSENDPSSGHYIGSLERLDAPEVFIWYDKRIHWRTG 215
D + M+I SN A G S ++ DP+SG + ++ P++ + I R G
Sbjct: 598 DTFLAGMKIKSNLAIGPTSYLTSWRNSEDPASGEFSYHIDIRGFPQLVVTKGAAITLRAG 777
Query: 216 PWNGTVFLGSPRMLTEYLAGWRFDQDKDGTTYLTYDFAVKAMFGILSLTPNGTL-KLVEF 274
PW G F G+ + + + + F Q D L Y+ +++ +TP GT+ +L+
Sbjct: 778 PWTGNKFSGAFGQVLQKILTF-FMQFTDQEISLEYETVNRSIITREVITPLGTIQRLLWS 954
Query: 275 LNNKEF-LSLTVSQNECDFYGKCGPFGNCDISSVPNICSCFKGFEPKNLVEWSSRNWTNG 333
+ N+ + + T ++C Y CG CD S P IC C +GF P+ +W+S +W G
Sbjct: 955 VRNQSWEIIATRPVDQCADYVFCGANSLCDTSKNP-ICDCLEGFMPQFQAKWNSLDWAGG 1131
Query: 334 CVRKEGMNLKCEMVKNGSSVVKQDKFLVHPNTKPPDFAER---SDVSRDKCRTDCLANCS 390
CV E L C+ NG D F+ H K PD + ++S D+CRT CL NCS
Sbjct: 1132CVSME--KLSCQ---NG------DGFMKHTGVKLPDTSSSWFGKNMSLDECRTLCLQNCS 1278
Query: 391 CLAYA-----YDPFIRCMYWSSELIDLQKFPT--SGVDLFIRVPA-ELEKEKGNKSFLII 442
C AYA D + C+ W +++D+ K P G +++IRV A +L++ + KS
Sbjct: 1279CTAYAGLDNDVDRSV-CLIWFGDILDMSKHPDPDQGQEIYIRVVASKLDRTRNKKSINTK 1455
Query: 443 AIAGGLG---AFILVIC------AYLLWRKWSARHTEQK------------EMKLDELPL 481
+AG L AF++ I + + RK + R E + + +D +
Sbjct: 1456KLAGSLVVIIAFVIFITILGLAISTCIQRKKNKRGDEGEIGIINHWKDKRGDEDIDLATI 1635
Query: 482 YDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAV 541
+DF + +ATN F SN LG+GGFGPVYKG+L +GQE+AVKRLS +SGQG+EEF NE+ +
Sbjct: 1636FDFSTISSATNHFSLSNKLGEGGFGPVYKGLLANGQEIAVKRLSNTSGQGMEEFKNEIKL 1815
Query: 542 ISKLQHRNLVRLLGCCVERGE 562
I++LQHRNLV+L GC V + E
Sbjct: 1816IARLQHRNLVKLFGCSVHQDE 1878
Score = 111 bits (277), Expect = 5e-25
Identities = 61/143 (42%), Positives = 87/143 (60%)
Frame = +1
Query: 602 PEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLI 661
PEYA+ G FS KSDV+SFGV++LEI+SG++ FY L+L+ AW+LW+EE + L+
Sbjct: 2167 PEYAVHGSFSIKSDVFSFGVIVLEIISGKKIGRFYDPHHHLNLLSHAWRLWIEERPLELV 2346
Query: 662 DREVWDASFESSMLRCIHIGLLCVQELPRDRPNISTVVLMLISEITHLPPPGKVAFVHKK 721
D + D + +LR IH+ LLCVQ P +RP++ ++VLML E LP P AF K
Sbjct: 2347 DELLDDPVIPTEILRYIHVALLCVQRRPENRPDMLSIVLMLNGE-KELPKPRLPAFYTGK 2523
Query: 722 NSKSGESSQKSQQSNSNNSVTLS 744
+ S S + S+T+S
Sbjct: 2524 HDPIWLGS----PSRCSTSITIS 2580
>TC9751 weakly similar to UP|O23743 (O23743) SFR1 protein precursor ,
partial (5%)
Length = 550
Score = 179 bits (455), Expect = 1e-45
Identities = 90/113 (79%), Positives = 100/113 (87%)
Frame = +1
Query: 636 YHNEDSLSLVGFAWKLWLEENIISLIDREVWDASFESSMLRCIHIGLLCVQELPRDRPNI 695
+ N+DSLSL+GFAWKLW EENIISLID E+WD S ESSMLRCIHIGLLCVQE+PR+RP I
Sbjct: 1 FRNDDSLSLLGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAI 180
Query: 696 STVVLMLISEITHLPPPGKVAFVHKKNSKSGESSQKSQQSNSNNSVTLSEVQG 748
STVVLMLISEIT LPPPG+VAFV K N+KS +SSQKSQ S SNN+VTLSEV G
Sbjct: 181 STVVLMLISEITQLPPPGQVAFVQKHNAKSSDSSQKSQCS-SNNNVTLSEVHG 336
>AV422094
Length = 462
Score = 125 bits (314), Expect = 2e-29
Identities = 58/100 (58%), Positives = 77/100 (77%)
Frame = +2
Query: 482 YDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAV 541
+ + +L+NATN F+ N LG+GGFGPVYKGIL DG +AVK+LS S QG +F+ E+A
Sbjct: 14 FSYSELKNATNDFNIDNKLGEGGFGPVYKGILNDGTVIAVKQLSLGSHQGKSQFIAEIAT 193
Query: 542 ISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
IS +QHRNLV+L GCC+E +++LVYE++ NKSLD LFG
Sbjct: 194 ISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFG 313
>BP032158
Length = 555
Score = 115 bits (289), Expect = 2e-26
Identities = 53/96 (55%), Positives = 72/96 (74%)
Frame = +2
Query: 486 KLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAVISKL 545
+++ ATN+F +N +G+GGFGPVYKG+L +G +AVK+LS S QG EF+NE+ +IS L
Sbjct: 26 QIKAATNNFDPANKIGEGGFGPVYKGVLSEGDVIAVKQLSSKSKQGNREFINEIGMISAL 205
Query: 546 QHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
QH NLV+L GCC+E + +LVYE+M N SL LFG
Sbjct: 206 QHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFG 313
>TC12343 similar to UP|CDK9_SCHPO (Q96WV9) Serine/threonine protein kinase
Cdk9 (Cyclin-dependent kinase Cdk9) , partial (7%)
Length = 723
Score = 111 bits (277), Expect = 5e-25
Identities = 50/99 (50%), Positives = 72/99 (72%)
Frame = +3
Query: 482 YDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAV 541
+ + L AT +FH N LG+GGFGPV+KG L DG+E+AVK+LS+ S QG +F+NE +
Sbjct: 207 FSYETLVAATKNFHAVNKLGEGGFGPVFKGKLNDGREIAVKKLSRRSNQGRTQFINEAKL 386
Query: 542 ISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLF 580
++++QHRN+V L G C E++LVYE++P +SLD LF
Sbjct: 387 LTRVQHRNVVSLFGYCAHGSEKLLVYEYVPRESLDKLLF 503
>TC11757 UP|Q91W27 (Q91W27) Tuberoinfundibular 39 residue protein, partial
(10%)
Length = 715
Score = 108 bits (270), Expect = 3e-24
Identities = 52/110 (47%), Positives = 77/110 (69%)
Frame = +2
Query: 472 KEMKLDELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQG 531
KE+ + ++ + +L+ AT++F N +G+GGFGPVYKG+L+DG+ A+K LS S QG
Sbjct: 254 KEISGIHVRVFTYKELKIATDNFSPVNKIGEGGFGPVYKGVLKDGKVGAIKVLSAESKQG 433
Query: 532 IEEFMNEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
++EFM E+ VIS+++H NLV+L GCCVE ++LVY + N SL L G
Sbjct: 434 VKEFMTEINVISEIEHENLVQLYGCCVEGNHRILVYNYHENNSLAQTLLG 583
>TC17753 similar to UP|Q40096 (Q40096) Receptor protein kinase, partial (6%)
Length = 471
Score = 107 bits (266), Expect = 9e-24
Identities = 60/126 (47%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Frame = +1
Query: 622 LLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLIDREVWDASFE-SSMLRCIHI 680
+LLEIV+G++N F H+ +S+ L+G AW+ W E + LID + S + S LRCIHI
Sbjct: 1 ILLEIVTGKKNRGFSHSSNSIYLIGHAWRFWKENQPLDLIDPRMEKYSSDLSEALRCIHI 180
Query: 681 GLLCVQELPRDRPNISTVVLMLISEITHLPPPGKVAFVHKKNSKSGESSQKSQQSNSNN- 739
LLCVQ+ P DRPN+STVV+ML SE + LP P + AF+ K+ +SS K S++N
Sbjct: 181 SLLCVQQHPEDRPNMSTVVVMLSSE-SALPQPKEPAFLIDKSFLEADSSTKHPSSSTNEI 357
Query: 740 SVTLSE 745
SVT+ E
Sbjct: 358 SVTMLE 375
>TC10873 similar to UP|Q9LDZ5 (Q9LDZ5) F2D10.13 (F5M15.3), partial (77%)
Length = 1478
Score = 102 bits (254), Expect = 2e-22
Identities = 49/99 (49%), Positives = 70/99 (70%)
Frame = +1
Query: 482 YDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAV 541
+ F +L +AT +F +N++G+GGFG VYKG L G+ VAVK+LS QG +EF+ EV +
Sbjct: 415 FGFRELADATRNFKEANLIGEGGFGKVYKGRLTTGEAVAVKQLSHDGRQGFQEFVMEVLM 594
Query: 542 ISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLF 580
+S L H NLVRL+G C + +++LVYE+MP SL+ LF
Sbjct: 595 LSLLHHTNLVRLIGYCTDGDQRLLVYEYMPMGSLEDHLF 711
Score = 62.0 bits (149), Expect = 3e-10
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Frame = +1
Query: 602 PEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLI 661
PEYAM G + KSD+YSFGV+LLE+++GRR +LV +A + + +
Sbjct: 967 PEYAMSGKLTLKSDIYSFGVVLLELLTGRRAIDTSRRPGEQNLVSWARPYFSDRRRFGHM 1146
Query: 662 DREVWDASFESSMLRCIH----IGLLCVQELPRDRPNISTVVLML 702
+ F S RC+H I +C+QE P+ RP I+ +V+ L
Sbjct: 1147 VDPLLQGRFPS---RCLHQAIAITAMCLQEQPKFRPLITDIVVAL 1272
>BP058703
Length = 366
Score = 101 bits (252), Expect = 4e-22
Identities = 46/99 (46%), Positives = 71/99 (71%)
Frame = +2
Query: 477 DELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFM 536
++ L+ +L+ AT++++ S LG+GG+G VYKG+L DG VAVKR + I+ F+
Sbjct: 68 EKAKLFTAEELQRATDNYNRSRFLGQGGYGMVYKGMLPDGTIVAVKRSKEIERSQIDTFV 247
Query: 537 NEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSL 575
NEV ++S++ HRN+V+LLGCC+E +LVYEF+PN +L
Sbjct: 248 NEVVILSQINHRNIVKLLGCCLETETPLLVYEFIPNGTL 364
>TC19726 similar to UP|Q9XIS3 (Q9XIS3) Lectin-like protein kinase, partial
(30%)
Length = 728
Score = 98.6 bits (244), Expect = 3e-21
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Frame = +3
Query: 439 FLIIAIAGGLGAFILVICAYLLWRKWSARHTEQKEMK----LDELP----LYDFVKLENA 490
F+I+A+ GGL L W + + E + L LP +++V+L+ A
Sbjct: 9 FVIVAVIGGL----------LWWIRLKKKREEGSNSQILGTLKSLPGTPREFNYVELKKA 158
Query: 491 TNSFHNSNMLGKGGFGPVYKGIL-EDGQEVAVKRLSKSSGQGIEEFMNEVAVISKLQHRN 549
TN+F + LG+GG+G VY+G+L ++ EVAVK S+ + ++F++E+ +I++L+H++
Sbjct: 159 TNNFDEKHKLGQGGYGVVYRGMLPKEKLEVAVKMFSRDKMKSTDDFLSELIIINRLRHKH 338
Query: 550 LVRLLGCCVERGEQMLVYEFMPNKSLDAFLF 580
LVRL G C + G +LVY++MPN SLD+ +F
Sbjct: 339 LVRLQGWCHKNGVLLLVYDYMPNGSLDSHIF 431
>TC19546 similar to UP|Q40543 (Q40543) Protein-serine/threonine kinase ,
partial (46%)
Length = 731
Score = 97.4 bits (241), Expect = 7e-21
Identities = 50/118 (42%), Positives = 76/118 (64%)
Frame = +1
Query: 464 WSARHTEQKEMKLDELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKR 523
WS ++ +Q +P Y + ++ AT +F + +LG+G FG VYK + G+ VAVK
Sbjct: 148 WSHQNNDQFASP-SGIPKYSYKDIQKATQNF--TTILGQGSFGTVYKATMPTGEVVAVKV 318
Query: 524 LSKSSGQGIEEFMNEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
L+ +S QG EF EV ++ +L HRNLV L+G CV++G+++LVY+FM N SL L+G
Sbjct: 319 LAPNSKQGEHEFQTEVHLLGRLHHRNLVNLVGFCVDKGQRILVYQFMSNGSLANLLYG 492
>TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete
Length = 3495
Score = 97.1 bits (240), Expect = 9e-21
Identities = 63/159 (39%), Positives = 88/159 (54%), Gaps = 17/159 (10%)
Frame = +3
Query: 440 LIIAIAGGLGAFILVICAY----LLWRKWSARHTEQKEMKLDELPLYD--FVK------- 486
L+I +A G +L +C Y + W ++ + + + LP D F+K
Sbjct: 1968 LLITLAFG----VLFVCRYRQKLIPWEGFAGKKYPMETNIIFSLPSKDDFFIKSVSIQAF 2135
Query: 487 ----LENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAVI 542
+E AT + ++G+GGFG VY+G L DGQEVAVK S +S QG EF NE+ ++
Sbjct: 2136 TLEYIEVATERY--KTLIGEGGFGSVYRGTLNDGQEVAVKVRSSTSTQGTREFDNELNLL 2309
Query: 543 SKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
S +QH NLV LLG C E +Q+LVY FM N SL L+G
Sbjct: 2310 SAIQHENLVPLLGYCNESDQQILVYPFMSNGSLQDRLYG 2426
Score = 57.0 bits (136), Expect = 1e-08
Identities = 33/98 (33%), Positives = 49/98 (49%)
Frame = +3
Query: 602 PEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLI 661
PEY SEKSDV+SFGV+LLEIVSGR + SLV +A + ++
Sbjct: 2679 PEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRTEWSLVEWATPYIRGSKVDEIV 2858
Query: 662 DREVWDASFESSMLRCIHIGLLCVQELPRDRPNISTVV 699
D + +M R + + L C++ RP++ +V
Sbjct: 2859 DPGIKGGYHAEAMWRVVEVALQCLEPFSTYRPSMVAIV 2972
>AV411237
Length = 427
Score = 96.7 bits (239), Expect = 1e-20
Identities = 48/104 (46%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Frame = +3
Query: 479 LPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNE 538
+PL+ + +L+ ATN+F ++ LG GGFG VY G L DG+EVAVKRL + + + +E+FMNE
Sbjct: 6 VPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLDGREVAVKRLYEHNFRRVEQFMNE 185
Query: 539 VAVISKLQHRNLVRLLGCCVERG-EQMLVYEFMPNKSLDAFLFG 581
V +++ L+H+NLV L GC E +LVYE++ N ++ L G
Sbjct: 186 VQILTSLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHG 317
>TC19002 weakly similar to UP|Q9XJ10 (Q9XJ10) ESTs C22458(C62866), partial
(48%)
Length = 780
Score = 93.2 bits (230), Expect = 1e-19
Identities = 45/101 (44%), Positives = 69/101 (67%)
Frame = +1
Query: 481 LYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVA 540
++ +L +ATN+F+ N LG+GGFG VY G L DG ++AVKRL S + EF EV
Sbjct: 25 VFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVE 204
Query: 541 VISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
++++++H+NL+ L G C E E+++VY++MPN SL + L G
Sbjct: 205 ILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHG 327
Score = 40.8 bits (94), Expect = 8e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1
Query: 602 PEYAMEGLFSEKSDVYSFGVLLLEIVSGRR 631
PEYAM G +E DV+SFG+LLLE+ SG++
Sbjct: 577 PEYAMLGKANECCDVFSFGILLLELASGKK 666
>TC9462 similar to UP|O49840 (O49840) Protein kinase (AT2G02800/T20F6.6) ,
partial (37%)
Length = 576
Score = 92.4 bits (228), Expect = 2e-19
Identities = 50/122 (40%), Positives = 74/122 (59%), Gaps = 10/122 (8%)
Frame = +1
Query: 469 TEQKEMKLDELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILED----------GQE 518
+E + + L + F +L+NAT +F ++LG+GGFG VYKG +++ G
Sbjct: 157 SEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHSFTAAKPGSGMV 336
Query: 519 VAVKRLSKSSGQGIEEFMNEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAF 578
VAVKRL QG +E++ EV + +L H NLV+L+G C++ ++LVYEFMP SLD
Sbjct: 337 VAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLDGENRLLVYEFMPKGSLDNH 516
Query: 579 LF 580
LF
Sbjct: 517 LF 522
>TC20143 similar to UP|Q9LDS6 (Q9LDS6) Serine/threonine kinase-like protein
, partial (5%)
Length = 587
Score = 92.4 bits (228), Expect = 2e-19
Identities = 45/100 (45%), Positives = 67/100 (67%)
Frame = +3
Query: 613 KSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLIDREVWDASFES 672
KSDV+SFGV++LEI+ G++N F+HN + L L+ +AW++W EE + LID + D+ S
Sbjct: 18 KSDVFSFGVIVLEIICGKKNMEFFHNYN-LDLLCYAWRVWSEEKPLELIDESLGDSMALS 194
Query: 673 SMLRCIHIGLLCVQELPRDRPNISTVVLMLISEITHLPPP 712
+ RCIHIGLLCVQ R + VV+++++ LP P
Sbjct: 195 EVFRCIHIGLLCVQXETRGQARHVRVVVLMLNGEKSLPIP 314
>TC19526 homologue to UP|AAQ96340 (AAQ96340) Protein kinase-like protein,
partial (37%)
Length = 432
Score = 91.7 bits (226), Expect = 4e-19
Identities = 50/101 (49%), Positives = 67/101 (65%), Gaps = 1/101 (0%)
Frame = +1
Query: 482 YDFVKLENATNSFHNSNMLGKGGFGPVYKGILED-GQEVAVKRLSKSSGQGIEEFMNEVA 540
+ F +L AT +F +LG+GGFG VYKG LE GQ VAVK+L ++ QG EF+ EV
Sbjct: 52 FTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVL 231
Query: 541 VISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFG 581
++S L H NLV L+G C + +++LVYEFMP SL+ L G
Sbjct: 232 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHG 354
>AI967588
Length = 380
Score = 89.7 bits (221), Expect = 1e-18
Identities = 44/90 (48%), Positives = 62/90 (68%)
Frame = +3
Query: 490 ATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAVISKLQHRN 549
AT++F +N++G GGFG VYK L G+ VAVK+LS++ QG EFM E+ + ++H+N
Sbjct: 45 ATDNFSKTNIIGDGGFGTVYKATLTSGKTVAVKKLSEAKTQGHREFMAEMETLGNVKHQN 224
Query: 550 LVRLLGCCVERGEQMLVYEFMPNKSLDAFL 579
LV LLG C E++LVYE++ N SLD L
Sbjct: 225 LVSLLGYCSIGEEKLLVYEYLVNGSLDLXL 314
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,534,547
Number of Sequences: 28460
Number of extensions: 220597
Number of successful extensions: 1517
Number of sequences better than 10.0: 276
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of query: 748
length of database: 4,897,600
effective HSP length: 97
effective length of query: 651
effective length of database: 2,136,980
effective search space: 1391173980
effective search space used: 1391173980
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC144721.6