BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144645.6 - phase: 0 /pseudo
(570 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP034533 84 5e-17
AV428660 80 9e-16
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 55 3e-08
AV418552 55 4e-08
AW720417 50 1e-06
BE122449 49 2e-06
AV779571 45 2e-05
AV422734 43 1e-04
AV408212 42 4e-04
TC10144 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, part... 39 0.002
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc... 39 0.002
TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pro... 38 0.004
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ... 37 0.011
AW719943 35 0.043
TC11441 similar to PIR|S54157|S54157 extensin-like protein - cow... 34 0.056
AW719831 34 0.056
TC14737 similar to UP|Q9LEB3 (Q9LEB3) RNA binding protein 47, pa... 34 0.073
AV410177 33 0.095
TC19047 similar to UP|Q9FGH2 (Q9FGH2) Gb|AAC63835.1, partial (22%) 33 0.095
TC14392 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, pa... 33 0.16
>BP034533
Length = 548
Score = 84.3 bits (207), Expect = 5e-17
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -2
Query: 453 TTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSRPLSNELHKRRLDAV 512
T GC LAKHRKSSTLE+KD+LLHLEK+W++T+PG+ +E K RP+ +E+HK RL A+
Sbjct: 547 TRSGCSLAKHRKSSTLEAKDILLHLEKSWNMTLPGFGGDEIKSYKRPVQSEIHKERLAAI 368
Query: 513 R 513
+
Sbjct: 367 K 365
>AV428660
Length = 408
Score = 80.1 bits (196), Expect = 9e-16
Identities = 59/108 (54%), Positives = 63/108 (57%), Gaps = 20/108 (18%)
Frame = +3
Query: 1 MAENVIGS-------PDSQIQN--PSSSNPSIPSPSPIS-------QQQQSPSIHMSNSS 44
MAE GS P +QI N PSSSNP+I SPS IS QQQQSPS+
Sbjct: 87 MAEPACGSSPFTTMDPQAQIPNAIPSSSNPTIQSPSSISNSNLAQQQQQQSPSLPQIPQD 266
Query: 45 PSLSQDQQQLHTIN---TINPN-SNFQLQQTLQRSPSMSRLNQIQPQQ 88
L Q QQQ +NPN S FQL QTLQRSPSMSRLNQIQPQQ
Sbjct: 267 -QLQQPQQQQQAQGQAMNMNPNVSTFQLHQTLQRSPSMSRLNQIQPQQ 407
Score = 32.0 bits (71), Expect = 0.28
Identities = 30/92 (32%), Positives = 39/92 (41%), Gaps = 9/92 (9%)
Frame = +3
Query: 272 QSQWLKQMPAMSGPA--SPLRL------QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFM 323
Q+Q +P+ S P SP + QQ Q+Q L Q Q QQ Q M
Sbjct: 135 QAQIPNAIPSSSNPTIQSPSSISNSNLAQQQQQQSPSLPQIPQDQLQQPQQQQQAQGQAM 314
Query: 324 QQQKSMGQPQLHQQ-QPSPQQQQQQQLLQPQQ 354
++ QLHQ Q SP + Q +QPQQ
Sbjct: 315 NMNPNVSTFQLHQTLQRSPSMSRLNQ-IQPQQ 407
Score = 29.3 bits (64), Expect = 1.8
Identities = 28/76 (36%), Positives = 38/76 (49%), Gaps = 8/76 (10%)
Frame = +3
Query: 280 PAMSGPA---SPLRLQQHQRQQQQL--ASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQL 334
P+M+ PA SP Q Q +SS Q+ +++ L+Q QQQ+S PQ+
Sbjct: 81 PSMAEPACGSSPFTTMDPQAQIPNAIPSSSNPTIQSPSSISNSNLAQ-QQQQQSPSLPQI 257
Query: 335 HQ---QQPSPQQQQQQ 347
Q QQP QQQQ Q
Sbjct: 258 PQDQLQQP-QQQQQAQ 302
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 55.1 bits (131), Expect = 3e-08
Identities = 41/87 (47%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 RLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQL 349
+LQQ Q+ QQQ QLQQ QQQL Q QQQ S Q+ QQQ QQQQ
Sbjct: 14 QLQQQQQLQQQPPQLTQLQQQQ----QQQLPQVQQQQLS----QMQQQQLPQLQQQQLSQ 169
Query: 350 LQPQQQ-SQLQASVHQQQHLHSPRVAG 375
LQPQQQ QLQ HQQ ++ G
Sbjct: 170 LQPQQQLPQLQQLQHQQLPQQQQQMVG 250
Score = 53.5 bits (127), Expect = 9e-08
Identities = 51/132 (38%), Positives = 59/132 (44%)
Frame = +2
Query: 270 LTQSQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSM 329
L Q Q L+Q P P Q Q+QQQQL Q Q + M QQQL Q QQQ S
Sbjct: 17 LQQQQQLQQQP-------PQLTQLQQQQQQQLPQVQQQQLSQM--QQQQLPQLQQQQLSQ 169
Query: 330 GQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPRVAGPTGQKSISLTGSQP 389
QPQ QQ P QQ Q QQL QQQ + A + Q V GP + +S
Sbjct: 170 LQPQ--QQLPQLQQLQHQQL-PQQQQQMVGAGMGQAY------VQGPGRSQMVS-----Q 307
Query: 390 DATASGATTPGG 401
+ G T GG
Sbjct: 308 GQVSQGPTNIGG 343
Score = 47.4 bits (111), Expect = 6e-06
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 296 RQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQ 355
+Q QL QLQQ L Q +QQQ+ PQ+ QQQ S QQQQ LQ QQ
Sbjct: 2 QQLPQLQQQQQLQQQPPQLTQ------LQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQL 163
Query: 356 SQLQ-----ASVHQQQHLHSPR 372
SQLQ + Q QH P+
Sbjct: 164 SQLQPQQQLPQLQQLQHQQLPQ 229
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +2
Query: 218 RLTPAQMRQQLSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQSQWLK 277
+L Q +QQL QQ Q+Q + QLS + Q P + L+Q Q +
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQ 184
Query: 278 QMPAMSGPASPLRLQQHQRQQQQLASSGQLQQ------NSMTLNQQQLSQ 321
Q+P + L+ QQ +QQQQ+ +G Q S ++Q Q+SQ
Sbjct: 185 QLPQL----QQLQHQQLPQQQQQMVGAGMGQAYVQGPGRSQMVSQGQVSQ 322
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 317 QQLSQFMQQQKSMGQP----QLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPR 372
QQL Q QQQ+ QP QL QQQ Q QQQ L QQ QL QQ P+
Sbjct: 2 QQLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQ 181
Query: 373 VAGPTGQK 380
P Q+
Sbjct: 182 QQLPQLQQ 205
Score = 37.4 bits (85), Expect = 0.007
Identities = 39/135 (28%), Positives = 46/135 (33%)
Frame = +2
Query: 213 QQQQIRLTPAQMRQQLSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQ 272
QQQQ++ P Q+ Q QQ QVQ QLS + Q P + L+Q
Sbjct: 23 QQQQLQQQPPQLTQLQQQQQQQLPQVQ-----------QQQLSQMQQQQLPQLQQQQLSQ 169
Query: 273 SQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQP 332
Q QQQL QLQ QQL Q QQ G
Sbjct: 170 LQ----------------------PQQQLPQLQQLQ-------HQQLPQQQQQMVGAGMG 262
Query: 333 QLHQQQPSPQQQQQQ 347
Q + Q P Q Q
Sbjct: 263 QAYVQGPGRSQMVSQ 307
Score = 35.4 bits (80), Expect = 0.025
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Frame = +2
Query: 28 PISQQQQSPSIHMSNSSPSLSQ-DQQQLHTINTINPNSNFQLQQTLQRSPSMSRLNQIQP 86
P QQQQ + P L+Q QQQ + + Q+QQ +L+Q+QP
Sbjct: 11 PQLQQQQQ----LQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQP 178
Query: 87 QQ--------QQQVVARQQAALYGGQMN----FGGSAAVSAQQQQLSGGVAAMGG 129
QQ Q Q + +QQ + G M G + Q Q+S G +GG
Sbjct: 179 QQQLPQLQQLQHQQLPQQQQQMVGAGMGQAYVQGPGRSQMVSQGQVSQGPTNIGG 343
>AV418552
Length = 386
Score = 54.7 bits (130), Expect = 4e-08
Identities = 48/121 (39%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Frame = +2
Query: 254 LSGLSQNGQPGMMHNSLTQSQWLKQMPAMSGPASP-------LRLQQHQRQQQQLASSGQ 306
L GL +G S + Q ++Q M P L+LQQ +QQQ Q
Sbjct: 2 LIGLLFSGDLAAFEPSSQEQQLMQQHQQMLSYFQPQQQLLPHLQLQQQLQQQQLAQLQQQ 181
Query: 307 LQQNSMTL-NQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQ-QQLLQPQQQSQLQASVHQ 364
L Q +TL QQQL+Q QQQ + Q QL Q Q + Q Q QQ L PQQQ Q Q HQ
Sbjct: 182 LSQLQLTLLQQQQLTQLQQQQLAQLQQQLAQLQLTQHQHTQLQQQLLPQQQFQ-QLPQHQ 358
Query: 365 Q 365
Q
Sbjct: 359 Q 361
Score = 52.0 bits (123), Expect = 3e-07
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Frame = +2
Query: 291 LQQHQRQ------QQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQ 344
+QQHQ+ QQQL QLQQ L QQQL+Q +QQQ S Q L QQQ Q Q
Sbjct: 68 MQQHQQMLSYFQPQQQLLPHLQLQQQ---LQQQQLAQ-LQQQLSQLQLTLLQQQQLTQLQ 235
Query: 345 QQQQLLQPQQQSQLQASVHQQQHL 368
QQQ QQ +QLQ + HQ L
Sbjct: 236 QQQLAQLQQQLAQLQLTQHQHTQL 307
Score = 45.4 bits (106), Expect = 2e-05
Identities = 35/82 (42%), Positives = 43/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 292 QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQ 351
QQ +Q QQ+ S Q QQ + Q Q Q QQQ + Q QL Q Q + QQQQ LQ
Sbjct: 59 QQLMQQHQQMLSYFQPQQQLLPHLQLQ-QQLQQQQLAQLQQQLSQLQLTLLQQQQLTQLQ 235
Query: 352 PQQQSQLQ---ASVHQQQHLHS 370
QQ +QLQ A + QH H+
Sbjct: 236 QQQLAQLQQQLAQLQLTQHQHT 301
Score = 35.8 bits (81), Expect = 0.019
Identities = 46/158 (29%), Positives = 64/158 (40%)
Frame = +2
Query: 168 GMVQSSQFSSANSAGQSLQGMQQAIGMMGSPNLASQMRTNGGLYTQQQQIRLTPAQMRQQ 227
G++ S ++ + Q Q MQQ M+ Q+ + L Q QQ +L AQ++QQ
Sbjct: 8 GLLFSGDLAAFEPSSQEQQLMQQHQQMLSYFQPQQQLLPHLQLQQQLQQQQL--AQLQQQ 181
Query: 228 LSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQSQWLKQMPAMSGPAS 287
LSQ L Q Q QL+ L Q Q + L Q Q
Sbjct: 182 LSQLQLTLLQQQ-------------QLTQLQQQ-QLAQLQQQLAQLQ------------- 280
Query: 288 PLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQ 325
L QH + QQQL Q QQ + +QQ + + M Q
Sbjct: 281 -LTQHQHTQLQQQLLPQQQFQQ--LPQHQQMVGEGMGQ 385
>AW720417
Length = 554
Score = 50.1 bits (118), Expect = 1e-06
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = +3
Query: 294 HQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQ 353
HQ+QQQQ Q Q M NQQQ + QQQ QPQ HQQ QQQQQQQ Q
Sbjct: 30 HQQQQQQ----HQYVQRHMMPNQQQ---YHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWL 188
Query: 354 QQSQL 358
+++QL
Sbjct: 189 RRTQL 203
Score = 40.4 bits (93), Expect = 8e-04
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +3
Query: 316 QQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPRVAG 375
QQQ Q++Q+ Q Q HQQQ QQ Q Q Q Q +Q Q QQQ L ++ G
Sbjct: 39 QQQQHQYVQRHMMPNQQQYHQQQ---HQQNQPQYHQQHQHNQQQQQQQQQQWLRRTQLGG 209
Score = 30.8 bits (68), Expect = 0.62
Identities = 27/79 (34%), Positives = 32/79 (40%)
Frame = +3
Query: 19 SNPSIPSPSPISQQQQSPSIHMSNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQRSPSM 78
SNP P P QQQQ + P+ Q QQ H N P + Q Q Q+
Sbjct: 3 SNPGF-QPRPHQQQQQQHQYVQRHMMPNQQQYHQQQHQQN--QPQYHQQHQHNQQQ---- 161
Query: 79 SRLNQIQPQQQQQVVARQQ 97
Q QQQQQ + R Q
Sbjct: 162------QQQQQQQWLRRTQ 200
Score = 30.8 bits (68), Expect = 0.62
Identities = 16/37 (43%), Positives = 20/37 (53%)
Frame = +3
Query: 331 QPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQH 367
QP+ HQQQ Q Q+ ++ QQQ HQQQH
Sbjct: 18 QPRPHQQQQQQHQYVQRHMMPNQQQ------YHQQQH 110
Score = 29.3 bits (64), Expect = 1.8
Identities = 21/64 (32%), Positives = 25/64 (38%)
Frame = +3
Query: 291 LQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLL 350
+Q+H QQ Q QQN +QQ HQ QQQQQQQ L
Sbjct: 60 VQRHMMPNQQQYHQQQHQQNQPQYHQQ-----------------HQHNQQQQQQQQQQWL 188
Query: 351 QPQQ 354
+ Q
Sbjct: 189 RRTQ 200
>BE122449
Length = 442
Score = 49.3 bits (116), Expect = 2e-06
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +1
Query: 423 LVAQVDPQGKLDPEVIDLLLEFADDFIDSVTTHGCILAKH 462
L QVDP KLD EV D+L+E A++F++++T GC LAKH
Sbjct: 322 LFNQVDPLEKLDSEVADVLVEIAENFLETITRSGCSLAKH 441
>AV779571
Length = 538
Score = 45.4 bits (106), Expect = 2e-05
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +1
Query: 295 QRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSM-GQPQLH----QQQPSPQQQQQQQL 349
Q Q QQ+ + Q Q + +Q L Q +Q Q S GQ Q H QQQ QQQ QQQ+
Sbjct: 133 QSQPQQVFQNNQENQQLLQ-SQSHLQQHLQHQHSFNGQTQNHNHNQQQQQQQQQQTQQQV 309
Query: 350 LQPQQQSQLQASVHQQQHLHSPRVAGPTGQKSISLTGSQPDATASGATT 398
+ QQ +++ Q P+ + Q S+S S D+ TT
Sbjct: 310 VDNQQIGNAGSTMSQFVSAPQPQSSPTQAQSSLSQQQSFSDSNVKPVTT 456
Score = 30.0 bits (66), Expect = 1.1
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Frame = +1
Query: 212 TQQQQIRLTPAQMRQQLSQQAL--NSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNS 269
T + ++ AQM QQ Q + N+Q+ Q + +S S + Q S NGQ +++
Sbjct: 88 TSRTELL*VQAQM*QQSQPQQVFQNNQENQQLLQSQSHLQQHLQHQH-SFNGQTQNHNHN 264
Query: 270 LTQSQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSM 329
Q Q QQ Q+ QQQ+ + Q+ T++Q + Q +
Sbjct: 265 QQQQQ-----------------QQQQQTQQQVVDNQQIGNAGSTMSQFVSAPQPQSSPTQ 393
Query: 330 GQPQLHQQQ 338
Q L QQQ
Sbjct: 394 AQSSLSQQQ 420
Score = 29.3 bits (64), Expect = 1.8
Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Frame = +1
Query: 31 QQQQSPSIHMSNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQRSPSMS----RLNQIQP 86
QQ Q + +N Q+ QQL S LQQ LQ S + N Q
Sbjct: 130 QQSQPQQVFQNN------QENQQLL-------QSQSHLQQHLQHQHSFNGQTQNHNHNQQ 270
Query: 87 QQQQQVVARQQAALYGGQMNFGGSAA---VSAQQQQLS 121
QQQQQ QQ + Q+ GS VSA Q Q S
Sbjct: 271 QQQQQQQQTQQQVVDNQQIGNAGSTMSQFVSAPQPQSS 384
>AV422734
Length = 448
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/103 (34%), Positives = 41/103 (38%), Gaps = 32/103 (31%)
Frame = +1
Query: 292 QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMG----------------QPQLH 335
QQHQ+ QQQL Q QQ L QQL + QQQ+ +P
Sbjct: 115 QQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQAAAISRFPSSIDAHLRPIRPINL 294
Query: 336 QQQPSPQQ----------------QQQQQLLQPQQQSQLQASV 362
QQ P+P QQQQQ QPQQQ Q Q V
Sbjct: 295 QQNPNPNPNNPILNLHQNPNSNHLQQQQQQQQPQQQQQQQKMV 423
Score = 36.6 bits (83), Expect = 0.011
Identities = 22/48 (45%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Frame = +1
Query: 323 MQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQ----LQASVHQQQ 366
M++ K++ Q HQQQ Q QQQ L Q QQQ Q LQ QQQ
Sbjct: 70 MEEAKALHQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQ 213
Score = 36.2 bits (82), Expect = 0.015
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 24/93 (25%)
Frame = +1
Query: 290 RLQQHQRQQQQLASSGQ----------------LQQNS--------MTLNQQQLSQFMQQ 325
+LQ+ Q+QQQQ A+ + LQQN + L+Q S +QQ
Sbjct: 193 QLQKQQQQQQQAAAISRFPSSIDAHLRPIRPINLQQNPNPNPNNPILNLHQNPNSNHLQQ 372
Query: 326 QKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQL 358
Q+ QPQ QQQQQQ++++P +L
Sbjct: 373 QQQQQQPQ--------QQQQQQKMVRPGNPMEL 447
Score = 35.4 bits (80), Expect = 0.025
Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +1
Query: 324 QQQKSMGQPQLHQQQPSPQQQQQQQL-------LQPQQQSQLQAS 361
Q Q Q Q HQQQ QQQQQQQ LQ QQQ Q QA+
Sbjct: 97 QHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQAA 231
Score = 35.4 bits (80), Expect = 0.025
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = +1
Query: 292 QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQ 348
QQHQ QQQQ +QQQL +QQQ+ Q L QQ QQQQQQQ
Sbjct: 94 QQHQHQQQQHQQ-----------HQQQL--MLQQQQQQQQHFLLLQQLQKQQQQQQQ 225
Score = 32.3 bits (72), Expect = 0.21
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +1
Query: 334 LHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQH 367
LHQQ Q QQQQ Q QQQ LQ QQQH
Sbjct: 88 LHQQH----QHQQQQHQQHQQQLMLQQQQQQQQH 177
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/68 (33%), Positives = 33/68 (47%), Gaps = 7/68 (10%)
Frame = +1
Query: 31 QQQQSPSIHMSNSSPSLSQDQQQLHTIN---TINPNSNFQLQQTLQRSPSMSRLNQIQ-- 85
QQQQ + +S S+ + + IN NPN N + L ++P+ + L Q Q
Sbjct: 208 QQQQQQAAAISRFPSSIDAHLRPIRPINLQQNPNPNPNNPILN-LHQNPNSNHLQQQQQQ 384
Query: 86 --PQQQQQ 91
PQQQQQ
Sbjct: 385 QQPQQQQQ 408
Score = 28.9 bits (63), Expect = 2.4
Identities = 28/86 (32%), Positives = 39/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 17 SSSNPSIPSPSPIS---QQQQSPSIHMSNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQ 73
SS S+ S IS + +++ ++H + Q QQQ H + LQQ Q
Sbjct: 16 SSIVVSVSSDCSISWHTKMEEAKALHQQH------QHQQQQHQQH----QQQLMLQQQQQ 165
Query: 74 RSPSMSRLNQIQPQQQQQVVARQQAA 99
+ L Q+Q QQQQQ QQAA
Sbjct: 166QQQHFLLLQQLQKQQQQQ----QQAA 231
>AV408212
Length = 362
Score = 41.6 bits (96), Expect = 4e-04
Identities = 28/67 (41%), Positives = 32/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 316 QQQLSQFMQQQKSMGQP----QLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSP 371
QQQ Q MQ Q+ + Q Q QQQ QQQQQQQ QQQ Q Q + HL +
Sbjct: 27 QQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNG 206
Query: 372 RVAGPTG 378
G G
Sbjct: 207 SANGLVG 227
Score = 41.6 bits (96), Expect = 4e-04
Identities = 26/64 (40%), Positives = 29/64 (44%)
Frame = +3
Query: 306 QLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQ 365
Q QQ+ QQQ MQQ L QQQ QQQQQQQ Q QQ Q Q+ +
Sbjct: 3 QPQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Query: 366 QHLH 369
H
Sbjct: 183 DRAH 194
Score = 41.2 bits (95), Expect = 5e-04
Identities = 24/56 (42%), Positives = 29/56 (50%)
Frame = +3
Query: 293 QHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQ 348
Q Q+QQQ + L Q L QQQ Q QQQ+ Q Q QQQP QQQ + +
Sbjct: 24 QQQQQQQHMQMQQILLQRHAALQQQQQQQ-QQQQQQQQQQQSQQQQPQSQQQSRDR 188
Score = 40.4 bits (93), Expect = 8e-04
Identities = 30/69 (43%), Positives = 36/69 (51%)
Frame = +3
Query: 292 QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQ 351
QQ QQQQ Q+QQ + Q+ + QQQ Q Q QQQ QQQ QQQ Q
Sbjct: 9 QQSPHQQQQQQQHMQMQQILL----QRHAALQQQQ----QQQQQQQQQQQQQQSQQQQPQ 164
Query: 352 PQQQSQLQA 360
QQQS+ +A
Sbjct: 165 SQQQSRDRA 191
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/67 (38%), Positives = 30/67 (43%)
Frame = +3
Query: 297 QQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQS 356
Q QQ Q QQ M + Q L + Q+ Q Q QQQ QQ QQQ QPQ Q
Sbjct: 3 QPQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQ---QPQSQQ 173
Query: 357 QLQASVH 363
Q + H
Sbjct: 174 QSRDRAH 194
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/58 (44%), Positives = 30/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 316 QQQLSQFMQQQKSMGQPQ-LHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPR 372
QQ Q QQQ+ M Q L Q+ + QQQQQQQ Q QQQ Q Q+ Q Q R
Sbjct: 9 QQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Score = 34.7 bits (78), Expect = 0.043
Identities = 20/53 (37%), Positives = 22/53 (40%)
Frame = +3
Query: 285 PASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQ 337
P + QQH + QQ L Q QQQ Q QQQ QPQ QQ
Sbjct: 18 PHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQ 176
Score = 33.1 bits (74), Expect = 0.12
Identities = 25/79 (31%), Positives = 31/79 (38%), Gaps = 12/79 (15%)
Frame = +3
Query: 331 QPQL--HQQQPSPQQQQQQQLL----------QPQQQSQLQASVHQQQHLHSPRVAGPTG 378
QPQ HQQQ Q Q QQ+L Q QQQ Q Q QQ P+ +
Sbjct: 3 QPQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Query: 379 QKSISLTGSQPDATASGAT 397
++ L GS + T
Sbjct: 183 DRAHLLNGSANGLVGNSGT 239
Score = 30.8 bits (68), Expect = 0.62
Identities = 26/78 (33%), Positives = 33/78 (41%), Gaps = 6/78 (7%)
Frame = +3
Query: 44 SPSLSQDQQQLHTINTINPNSNFQLQQTLQRSPSMSRLNQIQPQQQQQVVARQQ----AA 99
SP Q QQQ + I + LQQ Q+ + Q Q QQQQ ++QQ A
Sbjct: 15 SPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAH 194
Query: 100 LYGGQMN--FGGSAAVSA 115
L G N G S +A
Sbjct: 195 LLNGSANGLVGNSGTANA 248
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 267 HNSLTQSQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQ 326
H Q Q ++ + + L+ QQ Q+QQQQ QQ +QQQ Q QQ
Sbjct: 21 HQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQ-------QQQQQQQSQQQQPQSQQQS 179
Query: 327 K 327
+
Sbjct: 180 R 182
Score = 29.3 bits (64), Expect = 1.8
Identities = 34/114 (29%), Positives = 43/114 (36%)
Frame = +3
Query: 31 QQQQSPSIHMSNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQRSPSMSRLNQIQPQQQQ 90
Q QQSP Q QQQ H Q+QQ L + + + Q Q QQQQ
Sbjct: 3 QPQQSPH----------QQQQQQQH----------MQMQQILLQRHAALQQQQQQQQQQQ 122
Query: 91 QVVARQQAALYGGQMNFGGSAAVSAQQQQLSGGVAAMGGSASNLSRSALIGQSG 144
Q +QQ+ Q QQQ + GSA+ L+G SG
Sbjct: 123 QQQQQQQSQQQQPQ-----------SQQQSRDRAHLLNGSANG-----LVGNSG 236
>TC10144 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, partial (8%)
Length = 600
Score = 39.3 bits (90), Expect = 0.002
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 294 HQRQQQQLASSGQLQQ-NSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQP 352
H+ +A+ +L++ +M LN + + QQ+ QPQ+ Q+ PQQQ QQ + P
Sbjct: 3 HESPVTAIAAIQELEELGNMDLNAPLRDETLPQQQ---QPQVLPQEAQPQQQVPQQQVPP 173
Query: 353 QQQSQLQASVHQQQH 367
QQ Q +QQQ+
Sbjct: 174 LQQVPPQQPAYQQQY 218
Score = 33.5 bits (75), Expect = 0.095
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +3
Query: 299 QQLASSGQLQQNSM----TLNQQQ----LSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLL 350
Q+L G + N+ TL QQQ L Q Q Q+ + Q Q+ Q P QQ Q
Sbjct: 36 QELEELGNMDLNAPLRDETLPQQQQPQVLPQEAQPQQQVPQQQVPPLQQVPPQQPAYQQQ 215
Query: 351 QPQQQSQLQASVHQQQHLHSPRVAGPTGQKSISLTGSQPDATA 393
P Q + QQQ P +GP ++ L+G Q D A
Sbjct: 216 YPPFHMQQYHHLQQQQPFQHP*ESGPR*EE---LSGPQFDYEA 335
>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
factor PosF21 (AtbZIP59), partial (17%)
Length = 570
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/72 (36%), Positives = 30/72 (41%)
Frame = +1
Query: 299 QQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQL 358
QQ + Q Q Q Q+ Q Q Q QQQQQQ + QPQQQ Q
Sbjct: 37 QQFYPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQ 216
Query: 359 QASVHQQQHLHS 370
Q Q+QH S
Sbjct: 217 Q---QQEQHQQS 243
Score = 33.9 bits (76), Expect = 0.073
Identities = 24/78 (30%), Positives = 31/78 (38%)
Frame = +1
Query: 294 HQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQ 353
H L ++ Q QQ + + Q Q QQ Q Q QQ QQQ QQ Q Q
Sbjct: 52 HNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQ--QQQ 225
Query: 354 QQSQLQASVHQQQHLHSP 371
+Q Q + + SP
Sbjct: 226 EQHQQSGDLKMRSATSSP 279
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 1/68 (1%)
Frame = +1
Query: 324 QQQKSMGQPQLHQQ-QPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPRVAGPTGQKSI 382
Q Q+ PQ HQQ Q QQ QQQ Q QQ Q QQQ + +G +S
Sbjct: 88 QFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQEQHQQSGDLKMRSA 267
Query: 383 SLTGSQPD 390
+ + S D
Sbjct: 268 TSSPSPKD 291
Score = 29.6 bits (65), Expect = 1.4
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1
Query: 292 QQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQ 337
Q+HQ+ Q Q Q QQ QQ Q MQQQ Q + HQQ
Sbjct: 115 QKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQ----QQEQHQQ 240
Score = 29.3 bits (64), Expect = 1.8
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 288 PLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLH-QQQPSPQQQQQ 346
P + QQHQ Q QQ + QQQ QQQ+ + QPQ QQQ Q QQ
Sbjct: 112 PQKHQQHQHQFQQ------------PIQQQQ----QQQQQPIQQPQQQMQQQQQEQHQQS 243
Query: 347 QQL 349
L
Sbjct: 244 GDL 252
>TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
partial (33%)
Length = 1002
Score = 38.1 bits (87), Expect = 0.004
Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 28/192 (14%)
Frame = +1
Query: 214 QQQIRLTPAQMRQQLSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQS 273
+ Q L Q+ Q+ S + +SQ + S++ + S S + N +
Sbjct: 415 ETQKELAKLQLAQKESSSSSHSQSNEDKSPSTTDSKKADNASDASNQQLALALPNQIAP- 591
Query: 274 QWLKQMPAMSGPASPL-RLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQP 332
+ PA + P +P + Q +Q S L N+ T+ Q +Q++ + P
Sbjct: 592 ---QPQPAAAQPQAPAPNVTQAPQQPAYYIPSTPLPGNTQTVAQLPQNQYLPPDQQYRTP 762
Query: 333 QLHQ---------------------------QQPSPQQQQQQQLLQPQQQSQLQASVHQQ 365
Q+ QQP QQQQQQQ Q QQ Q Q
Sbjct: 763 QMQDMSRVAPQPCTNXSGXSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQP 942
Query: 366 QHLHSPRVAGPT 377
+ SP++ P+
Sbjct: 943 PSMQSPQIRPPS 978
Score = 30.0 bits (66), Expect = 1.1
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Frame = +1
Query: 16 PSSSNPSIPSPSPISQQQQSPSIHM-SNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQR 74
P+++ P P+P+ ++Q Q P+ ++ S P +Q QL + P+ ++ Q
Sbjct: 601 PAAAQPQAPAPN-VTQAPQQPAYYIPSTPLPGNTQTVAQLPQNQYLPPDQQYRTPQMQDM 777
Query: 75 S----------------PSMSRLNQIQ-PQQQQQVVARQQ 97
S P + + Q Q PQQQQQ +QQ
Sbjct: 778 SRVAPQPCTNXSGXSPPPPVQQYPQYQQPQQQQQQQQQQQ 897
>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
Length = 841
Score = 36.6 bits (83), Expect = 0.011
Identities = 33/89 (37%), Positives = 41/89 (45%), Gaps = 1/89 (1%)
Frame = +1
Query: 325 QQKSMGQPQLHQQQPSPQQQQQ-QQLLQPQQQSQLQASVHQQQHLHSPRVAGPTGQKSIS 383
Q +S QPQ H QQ PQ Q Q Q + QPQ Q QLQ H QQ P+ +
Sbjct: 109 QLQSQPQPQ-HIQQSQPQPQSQPQHIQQPQPQPQLQ---HIQQSQPQPQFQ----NQHFQ 264
Query: 384 LTGSQPDATASGATTPGGSSSQGTEAATN 412
G+ P A TPG + Q ++TN
Sbjct: 265 YPGTYP--PPPWAATPGYPNYQNHLSSTN 345
Score = 33.9 bits (76), Expect = 0.073
Identities = 35/102 (34%), Positives = 41/102 (39%), Gaps = 2/102 (1%)
Frame = +1
Query: 277 KQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMT-LNQQQLSQFMQQQKSMGQPQ-L 334
+QM + P PL+ Q Q Q Q + L Q Q +QQ + Q Q
Sbjct: 1 EQMQLHNEP-QPLQYQPQPHLQHQPQHHPHFQPHPQPQLQSQPQPQHIQQSQPQPQSQPQ 177
Query: 335 HQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPRVAGP 376
H QQP PQ Q LQ QQSQ Q Q QH P P
Sbjct: 178 HIQQPQPQPQ-----LQHIQQSQPQPQ-FQNQHFQYPGTYPP 285
>AW719943
Length = 508
Score = 34.7 bits (78), Expect = 0.043
Identities = 27/66 (40%), Positives = 34/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 286 ASPLRLQQHQRQQQ--QLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQ 343
++P + QQ Q+QQQ Q QQNS+ +QQQ QF QQQ+ QQ
Sbjct: 77 STPQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQ--QFQQQQQ--------------QQ 208
Query: 344 QQQQQL 349
QQQ QL
Sbjct: 209 QQQHQL 226
Score = 34.3 bits (77), Expect = 0.056
Identities = 27/65 (41%), Positives = 29/65 (44%)
Frame = +2
Query: 294 HQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQ 353
H L S+ Q QQ QQQL Q QQ + QQ QQQQQQQ Q
Sbjct: 50 HSTMSFSLFSTPQQQQQPQ--QQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQ----Q 211
Query: 354 QQSQL 358
QQ QL
Sbjct: 212 QQHQL 226
Score = 33.9 bits (76), Expect = 0.073
Identities = 23/54 (42%), Positives = 23/54 (42%)
Frame = +2
Query: 297 QQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLL 350
QQQQ Q QQ QQ S F Q Q Q QQQ QQQQ Q L
Sbjct: 86 QQQQ-----QPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLFL 232
Score = 33.5 bits (75), Expect = 0.095
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 313 TLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQH 367
T++ S QQQ+ Q QL Q Q QQ QQQ Q Q QQQH
Sbjct: 56 TMSFSLFSTPQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQH 220
Score = 30.8 bits (68), Expect = 0.62
Identities = 23/48 (47%), Positives = 25/48 (51%), Gaps = 6/48 (12%)
Frame = +2
Query: 318 QLSQFMQQQKSMGQPQLHQQQPSPQ------QQQQQQLLQPQQQSQLQ 359
Q Q QQQ+ + QPQ QQ P Q QQQQ Q Q QQQ Q Q
Sbjct: 86 QQQQQPQQQQQLFQPQ--QQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 28.9 bits (63), Expect = 2.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 66 FQLQQTLQRSPSMSRLNQIQPQQQQQVVARQQAALYGGQMNFGGSAAVSAQQQQ 119
F+ T+ S + Q QPQQQQQ+ QQ + + F QQQQ
Sbjct: 41 FRFHSTMSFSLFSTPQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQ 202
>TC11441 similar to PIR|S54157|S54157 extensin-like protein - cowpea
(fragment) {Vigna unguiculata;} , partial (6%)
Length = 541
Score = 34.3 bits (77), Expect = 0.056
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 15 NPSSSNPSIPSPSPISQQQQSPSIHMSNSSPSLSQD 50
+P SS+ S PSP+P Q+ QSP +N++PS + D
Sbjct: 74 SPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASD 181
>AW719831
Length = 436
Score = 34.3 bits (77), Expect = 0.056
Identities = 29/104 (27%), Positives = 42/104 (39%), Gaps = 2/104 (1%)
Frame = +2
Query: 268 NSLTQSQWLKQMPAMSGPAS--PLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQ 325
N+ Q Q L P S S PLR +H QQ L + + T S ++
Sbjct: 83 NNGEQQQQLLFPPQFSRFLSSLPLRCDRHHHQQ*HQQPPPLLLRRTPTS-----SSLRRR 247
Query: 326 QKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLH 369
+ QL +Q P+P +QQ L + Q + +HQ LH
Sbjct: 248 MQGQAHVQLRRQNPAPPPRQQPHLRLRRHQDPRRRPLHQAPRLH 379
>TC14737 similar to UP|Q9LEB3 (Q9LEB3) RNA binding protein 47, partial (32%)
Length = 803
Score = 33.9 bits (76), Expect = 0.073
Identities = 25/93 (26%), Positives = 40/93 (42%)
Frame = +3
Query: 213 QQQQIRLTPAQMRQQLSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQ 272
QQQQ + AQ +Q ++ Q ++++A M Q+ Q+ P + H+
Sbjct: 174 QQQQPQQWAAQQQQWMAMQY----------PATAMAMMQQQMMMYPQHYMPYVHHHYQPH 323
Query: 273 SQWLKQMPAMSGPASPLRLQQHQRQQQQLASSG 305
Q + A +G + QQH QQQQ G
Sbjct: 324 HQQQQAAAAAAGAVPQQQHQQHHHQQQQKQQQG 422
Score = 33.1 bits (74), Expect = 0.12
Identities = 29/79 (36%), Positives = 32/79 (39%), Gaps = 9/79 (11%)
Frame = +3
Query: 297 QQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQL------HQQQPSPQQQQQQQLL 350
QQQQ QQ M + + M QQ+ M PQ H QP QQQQ
Sbjct: 174 QQQQPQQWAAQQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPHHQQQQAAAAA 353
Query: 351 Q---PQQQSQLQASVHQQQ 366
PQQQ Q HQQQ
Sbjct: 354 AGAVPQQQHQ--QHHHQQQ 404
Score = 30.4 bits (67), Expect = 0.81
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +3
Query: 257 LSQNGQPGMMHN---SLTQSQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMT 313
L+QN P + Q QW+ AM PA+ + + Q Q + +
Sbjct: 153 LNQNAPPQQQQPQQWAAQQQQWM----AMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQP 320
Query: 314 LNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQ 348
+QQQ Q Q HQQ QQQ+QQQ
Sbjct: 321 HHQQQ--QAAAAAAGAVPQQQHQQHHHQQQQKQQQ 419
>AV410177
Length = 418
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Frame = -1
Query: 336 QQQPSPQQQQQQQL-----------LQPQQQSQLQAS-VHQQQHLHSPRVAGPTGQKSIS 383
Q+QPS Q +QL + P +Q+ HQQ S R A P
Sbjct: 334 QEQPSKQATTPKQLALSCSHPKKSKVYPNTPAQIHNYWSHQQPRPQSRRRAKPA-HLQYP 158
Query: 384 LTGSQPDATASGATTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDPQGK 432
T S TASG T SSS G + QV R+ Q L PQGK
Sbjct: 157 ATNSSAHQTASG*TAAASSSSPGRAPSPQQV--SRQTQ*LNGAFLPQGK 17
>TC19047 similar to UP|Q9FGH2 (Q9FGH2) Gb|AAC63835.1, partial (22%)
Length = 473
Score = 33.5 bits (75), Expect = 0.095
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Frame = +3
Query: 9 PDSQIQ-NPSSSNPSIPSPSPISQQQQSPSIHMSNSSPSLS------QDQQQLHTINTIN 61
P S IQ N SS++ +PSP +S S S ++ SLS L T+ TI
Sbjct: 6 PLSFIQFNHSSNSFYVPSPKSLSSISSSLSRKLTQKPSSLSFPFSFTTQHNLLQTLITIF 185
Query: 62 PNSN-----FQLQQTLQRSPS--MSRLNQIQPQQQQQV 92
PN+N F L + ++ S RL+Q++ Q+QQ+
Sbjct: 186 PNANRNKKPFSLSKKIEAVHSC*SWRLHQVERHQRQQL 299
>TC14392 similar to UP|Q9LEB4 (Q9LEB4) RNA binding protein 45, partial (77%)
Length = 1576
Score = 32.7 bits (73), Expect = 0.16
Identities = 23/54 (42%), Positives = 25/54 (45%), Gaps = 8/54 (14%)
Frame = +3
Query: 316 QQQLSQFMQQQK--SMGQPQLHQQQ------PSPQQQQQQQLLQPQQQSQLQAS 361
QQ Q+ QQQ+ M PQ HQ Q PS Q QQQ PQQ Q S
Sbjct: 156 QQPNQQYQQQQQPYMMMPPQQHQPQPPTMWAPSAAQPPQQQHAPPQQHQHAQPS 317
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.309 0.121 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,204,007
Number of Sequences: 28460
Number of extensions: 116068
Number of successful extensions: 2006
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of query: 570
length of database: 4,897,600
effective HSP length: 95
effective length of query: 475
effective length of database: 2,193,900
effective search space: 1042102500
effective search space used: 1042102500
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144645.6