BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144617.9 + phase: 0
(1424 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC9902 similar to UP|BAD07483 (BAD07483) PDR-type ABC transporte... 423 e-119
BP055095 266 2e-71
TC11137 similar to GB|CAD59563.1|27368811|OSA535041 PDR-like ABC... 191 8e-66
AV406931 231 6e-61
BP057421 223 2e-58
TC8675 weakly similar to UP|Q9LFH0 (Q9LFH0) PDR9 ABC transporter... 130 1e-48
TC18438 similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter, ... 181 9e-46
BP029778 174 7e-44
BP042918 150 1e-36
AV408313 147 9e-36
CB828965 125 4e-29
TC9904 weakly similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transpo... 104 9e-23
AW720269 91 1e-18
AV771159 70 7e-17
AV416268 79 7e-15
BP049546 76 4e-14
TC18647 similar to UP|Q9ASR9 (Q9ASR9) At2g01320/F10A8.20, partia... 64 1e-10
BP071638 64 2e-10
BP075566 45 4e-10
BE122583 55 3e-09
>TC9902 similar to UP|BAD07483 (BAD07483) PDR-type ABC transporter 1, partial
(19%)
Length = 1207
Score = 423 bits (1088), Expect = e-119
Identities = 189/312 (60%), Positives = 241/312 (76%), Gaps = 2/312 (0%)
Frame = +1
Query: 1115 KNSELHRRNKQLIQELSVPSQSSKDLHFDAQYSQTFLAQCTYCLWKQHLSYWRNTSYTAV 1174
KNS+L RRNKQLIQEL P+ SKDL+F Q+SQ FL QC CLWKQ SYWRN YTAV
Sbjct: 1 KNSDLFRRNKQLIQELGEPAPDSKDLYFATQFSQPFLIQCQACLWKQRWSYWRNPPYTAV 180
Query: 1175 RLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERT 1234
R FT ++FG IFW +G K K+ QDL NA+GSMY+AV F+GV N +SVQP+V++ERT
Sbjct: 181 RFFFTTFIAVMFGTIFWDLGGKHKRRQDLLNAVGSMYSAVLFLGVQNSSSVQPVVSVERT 360
Query: 1235 VFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWNLFFTY 1294
VFYRE+AAGMYSA+PYA AQ+++ELP+I QAV YG+IVYAM+GF+WTA K W LFF Y
Sbjct: 361 VFYREKAAGMYSALPYAFAQILVELPYIFFQAVTYGVIVYAMIGFDWTAEKFFWYLFFMY 540
Query: 1295 FSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPV 1354
F+ LY+T+YGMM +A+TPN HVA I++ +FYAIW LFSGF++P IP+WW+WYYW CPV
Sbjct: 541 FTLLYFTFYGMMGVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSIPVWWRWYYWACPV 720
Query: 1355 AWTLNGLVTSQYGHNMDTLD--NGQSVEEFVRNYFGFEYDFLGVVAIVVVSFSVLFALIF 1412
AWT+ GL+ SQ+G +D G++V+ F+ +Y+G ++ F+GV A+VV ++LFA IF
Sbjct: 721 AWTIYGLIASQFGDITTVMDTEGGKTVKMFLEDYYGIKHSFIGVCAVVVPGVAILFAFIF 900
Query: 1413 TFGIKAFNFQKR 1424
IKAFNFQKR
Sbjct: 901 AVAIKAFNFQKR 936
Score = 66.6 bits (161), Expect = 3e-11
Identities = 68/315 (21%), Positives = 131/315 (41%), Gaps = 9/315 (2%)
Frame = +1
Query: 453 ELFHIGKQLGEELADPFDKSKFHSNVLITKKYGINKKELLRACASRELLLMKRNSFVYIF 512
+LF KQL +EL +P SK ++ ++ +AC ++ RN
Sbjct: 10 DLFRRNKQLIQELGEPAPDSK---DLYFATQFSQPFLIQCQACLWKQRWSYWRNPPYTAV 180
Query: 513 KATQLTYLATLTTTLFLRTKMYHSTIEDAQTYMGALFFTVT-VAMFNGISELNMTIMKLP 571
+ T++A + T+F H +D +G+++ V + + N S + ++
Sbjct: 181 RFFFTTFIAVMFGTIFWDLGGKHKRRQDLLNAVGSMYSAVLFLGVQNSSSVQPVVSVERT 360
Query: 572 IFYKQRDLLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFKQSLVVL 631
+FY+++ Y + Y+ ++++P + + I Y IGFD +FF L
Sbjct: 361 VFYREKAAGMYSALPYAFAQILVELPYIFFQAVTYGVIVYAMIGFDWTAEKFFWY----L 528
Query: 632 CINQMASALFRFMAALGRDIVVANTFGTFSLLAVT------VLGGFVISREDVHKWFLWG 685
F F +G + V S++A + GFV+ R + W+ W
Sbjct: 529 FFMYFTLLYFTFYGMMG--VAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSIPVWWRWY 702
Query: 686 YWSSPLMYGQNAIAVNEFLGHGWRKVAPNSNETLGVSILKSRGFFPQAYWYWIGVGALI- 744
YW+ P+ + + ++F G + +T+ + + G +IGV A++
Sbjct: 703 YWACPVAWTIYGLIASQF-GDITTVMDTEGGKTVKMFLEDYYGIKHS----FIGVCAVVV 867
Query: 745 -GYVFLFNFLFALAL 758
G LF F+FA+A+
Sbjct: 868 PGVAILFAFIFAVAI 912
>BP055095
Length = 538
Score = 266 bits (680), Expect = 2e-71
Identities = 125/177 (70%), Positives = 151/177 (84%)
Frame = +3
Query: 279 GHQNSVVIDYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEIS 338
G ++ +V DY LK+LGLD+CAD M+GD+M RGISGG+KKR+TTGEMLVGP K LFMDEIS
Sbjct: 6 GQRSQLVTDYALKVLGLDICADVMIGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEIS 185
Query: 339 NGLDSSTTFQIINSIKQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPREY 398
GLDSSTTFQI ++Q +HI++ T ++SLLQPAPET+ELFDDIILL++GQIVYQGPRE
Sbjct: 186 TGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPREN 365
Query: 399 VLEFFESTGFKCPERKGVADFLQEVTSRKDQWQYWAREDEPYNFVTVKDFARAFELF 455
VLEFFE GFKCPERKG ADFLQEVTS+KDQ QYW R+DEPY +V+V +F ++F F
Sbjct: 366 VLEFFEYMGFKCPERKGAADFLQEVTSKKDQEQYWFRKDEPYRYVSVPEFVQSFHSF 536
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/127 (27%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 951 KMFIEEVMELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1010
++ + ++++ L+ + ++G G+S Q+KR+T LV +FMDE ++GLD
Sbjct: 18 QLVTDYALKVLGLDICADVMIGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLD 197
Query: 1011 ARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFDSFDELLLLKLGGEQIYAGPIGNQCS 1069
+ + + +R V T+V ++ QP+ + F+ FD+++LL G+ +Y GP N
Sbjct: 198 SSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLS-EGQIVYQGPREN--- 365
Query: 1070 DLIQYFE 1076
++++FE
Sbjct: 366 -VLEFFE 383
>TC11137 similar to GB|CAD59563.1|27368811|OSA535041 PDR-like ABC transporter
{Oryza sativa (japonica cultivar-group);}, partial (15%)
Length = 786
Score = 191 bits (484), Expect(2) = 8e-66
Identities = 84/172 (48%), Positives = 114/172 (65%), Gaps = 5/172 (2%)
Frame = +1
Query: 1244 MYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWNLFFTYFSFLYYTYY 1303
MY+ +PYA+AQV E+P++ Q Y +IVYAM+ F+W K W F ++FSFLY+TYY
Sbjct: 250 MYAPLPYAIAQVFTEIPYVFAQTTFYSLIVYAMVSFDWKVDKFFWYFFVSFFSFLYFTYY 429
Query: 1304 GMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVT 1363
GMMT++ITPN VA I + +FY ++ LFSGF IP +IP WW WYYWICPVAWT+ GL+
Sbjct: 430 GMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGLIV 609
Query: 1364 SQYGHNMDTLDNGQSVEEF-----VRNYFGFEYDFLGVVAIVVVSFSVLFAL 1410
SQY + S + F + +Y+GF+ DF+G VA V+V F+ L
Sbjct: 610 SQYRDITSPISVAGSTQNFTVKGYIEDYYGFKPDFMGPVAAVLVLFTCFLCL 765
Score = 78.6 bits (192), Expect(2) = 8e-66
Identities = 35/69 (50%), Positives = 50/69 (71%)
Frame = +3
Query: 1175 RLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERT 1234
++ F ++ I+ G +FW +G ++ DL +G++YAAV F+GV N +VQP+VAIERT
Sbjct: 42 QVFFPLLAAIMVGSVFWKIGKNTESSTDLSMVIGALYAAVIFVGVNNCQTVQPVVAIERT 221
Query: 1235 VFYRERAAG 1243
VFYRERAAG
Sbjct: 222 VFYRERAAG 248
Score = 42.0 bits (97), Expect = 7e-04
Identities = 25/125 (20%), Positives = 48/125 (38%)
Frame = +1
Query: 579 LLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFKQSLVVLCINQMAS 638
L Y Y++ +IP + + I Y + FD + +FF V +
Sbjct: 244 LAMYAPLPYAIAQVFTEIPYVFAQTTFYSLIVYAMVSFDWKVDKFFWYFFVSFFSFLYFT 423
Query: 639 ALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAI 698
++ + VA+ F + GF I R + W++W YW P+ + +
Sbjct: 424 YYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGL 603
Query: 699 AVNEF 703
V+++
Sbjct: 604 IVSQY 618
>AV406931
Length = 438
Score = 231 bits (589), Expect = 6e-61
Identities = 107/145 (73%), Positives = 126/145 (86%)
Frame = +3
Query: 348 QIINSIKQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPREYVLEFFESTG 407
QI++S++Q +HILNGTA++SLLQPAPETY+LFDDIIL++DGQ+VY GPREYVL+FFES G
Sbjct: 3 QIVSSLRQYVHILNGTAVISLLQPAPETYDLFDDIILISDGQVVYHGPREYVLDFFESMG 182
Query: 408 FKCPERKGVADFLQEVTSRKDQWQYWAREDEPYNFVTVKDFARAFELFHIGKQLGEELAD 467
FKCPERKG ADFLQEVTS+KDQ QYW R DEPY FVTV FA AF+ FHIG++L EE+A
Sbjct: 183 FKCPERKGAADFLQEVTSKKDQEQYWVRRDEPYRFVTVTQFAEAFQSFHIGRKLAEEVAV 362
Query: 468 PFDKSKFHSNVLITKKYGINKKELL 492
PFDK+K H L TK+YGINKKELL
Sbjct: 363 PFDKTKSHPAALTTKEYGINKKELL 437
Score = 30.4 bits (67), Expect = 2.0
Identities = 28/118 (23%), Positives = 58/118 (48%), Gaps = 9/118 (7%)
Frame = +3
Query: 1030 TVVCTIHQPSIDIFDSFDELLLLKLGGEQIYAGPIGNQCSDLIQYFEAIQGVPTIKDGYN 1089
T V ++ QP+ + +D FD+++L+ G+ +Y GP ++ +FE++ + G
Sbjct: 48 TAVISLLQPAPETYDLFDDIILIS-DGQVVYHGP----REYVLDFFESMGFKCPERKG-- 206
Query: 1090 PATWMLEITSAGKEANLKV------NFTDVYKNSELHRR---NKQLIQELSVPSQSSK 1138
A ++ E+TS + V F V + +E + ++L +E++VP +K
Sbjct: 207 AADFLQEVTSKKDQEQYWVRRDEPYRFVTVTQFAEAFQSFHIGRKLAEEVAVPFDKTK 380
>BP057421
Length = 547
Score = 223 bits (568), Expect = 2e-58
Identities = 102/168 (60%), Positives = 139/168 (82%)
Frame = +3
Query: 192 DLKQSGRVTYNGKGLEEFVPQRTSAYVSQYDNHIGEMTVRETLAFSARCQGVGQNYEMLT 251
+L+ +G +TYNG L EFVP++T+AY+SQ D H+GEMTV+ETL FSARCQGVG Y+ L+
Sbjct: 36 ELRVTGEITYNGHKLNEFVPRKTAAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDXLS 215
Query: 252 ELLRKEKESKIEPDPDINAYMKEAAIEGHQNSVVIDYILKILGLDVCADTMVGDQMIRGI 311
EL R+EKE+ I P+ +++ +MK A++G ++S++ DY LKILGLD+C DT+VGD+M RG+
Sbjct: 216 ELGRREKEAGIFPEAELDLFMKATALKGTESSLITDYTLKILGLDICKDTIVGDEMHRGV 395
Query: 312 SGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHI 359
SGG+KKR+TTGEM+VGP K LFMDEIS GLDSSTTFQI+ ++Q +H+
Sbjct: 396 SGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHL 539
Score = 44.7 bits (104), Expect = 1e-04
Identities = 34/163 (20%), Positives = 71/163 (42%), Gaps = 31/163 (19%)
Frame = +3
Query: 894 IEGNIKVSGYQKNQKSFARISGYCEQFDIHSPNVTVYESLLYSAWLR------------- 940
+ G I +G++ N+ + + Y Q D+H +TV E+L +SA +
Sbjct: 45 VTGEITYNGHKLNEFVPRKTAAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDXLSELG 224
Query: 941 -------LSPEVD-----------HATRKMFIEEVMELVELNSLREALVGLPGENGLSTE 982
+ PE + + + ++++ L+ ++ +VG G+S
Sbjct: 225 RREKEAGIFPEAELDLFMKATALKGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGG 404
Query: 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV 1025
Q+KR+T +V +FMDE ++GLD+ +++ ++ V
Sbjct: 405 QKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIV 533
>TC8675 weakly similar to UP|Q9LFH0 (Q9LFH0) PDR9 ABC transporter, partial
(13%)
Length = 727
Score = 130 bits (328), Expect(2) = 1e-48
Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 3/124 (2%)
Frame = +1
Query: 1304 GMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVT 1363
GM +++TPN +A IL +SFY I LFSG+ +P ++P WW W Y++CP++W +NG++T
Sbjct: 226 GMFIVSVTPNVQLASILCSSFYTILNLFSGYFMPRPQMPKWWVWMYYLCPLSWAMNGMLT 405
Query: 1364 SQYG---HNMDTLDNGQSVEEFVRNYFGFEYDFLGVVAIVVVSFSVLFALIFTFGIKAFN 1420
SQYG NM ++ ++V F+ +Y+GF YDFLGV A+V++ F ++FA +F + I N
Sbjct: 406 SQYGDINKNMSVFEDVKTVATFLEDYYGFRYDFLGVTAVVLIVFPIVFAALFAYCIGNLN 585
Query: 1421 FQKR 1424
F +R
Sbjct: 586 FPRR 597
Score = 81.3 bits (199), Expect(2) = 1e-48
Identities = 37/73 (50%), Positives = 49/73 (66%)
Frame = +3
Query: 1230 AIERTVFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWN 1289
A ERTV YRER AGMYS Y+ AQV+IE+P+ +QA +Y II Y M+G W+A K+ W+
Sbjct: 3 ATERTVLYRERFAGMYSPWAYSFAQVLIEVPYSFIQAALYVIITYPMIGHYWSAYKIFWS 182
Query: 1290 LFFTYFSFLYYTY 1302
F + S L + Y
Sbjct: 183 FFSMFCSILNFNY 221
Score = 33.1 bits (74), Expect = 0.32
Identities = 24/121 (19%), Positives = 55/121 (44%), Gaps = 5/121 (4%)
Frame = +1
Query: 643 FMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNE 702
F+ ++ ++ +A+ + + + G+ + R + KW++W Y+ PL + N + ++
Sbjct: 232 FIVSVTPNVQLASILCSSFYTILNLFSGYFMPRPQMPKWWVWMYYLCPLSWAMNGMLTSQ 411
Query: 703 FLGHGWRKVAPNSNETLGVSILKSRGFFPQAYWY---WIGVGALIGYVF--LFNFLFALA 757
+ N N ++ + F Y + ++GV A++ VF +F LFA
Sbjct: 412 Y-------GDINKNMSVFEDVKTVATFLEDYYGFRYDFLGVTAVVLIVFPIVFAALFAYC 570
Query: 758 L 758
+
Sbjct: 571 I 573
>TC18438 similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter, partial (8%)
Length = 522
Score = 181 bits (458), Expect = 9e-46
Identities = 77/134 (57%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 1292 FTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWI 1351
F +F+ Y+TYYGMMT+A+TPN HVA I++ +FYAIW LFSGF++P RIP+WW+WYYW
Sbjct: 1 FMFFTLCYFTYYGMMTVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPRIPVWWRWYYWA 180
Query: 1352 CPVAWTLNGLVTSQYGHNMDTLDNGQ-SVEEFVRNYFGFEYDFLGVVAIVVVSFSVLFAL 1410
CPVAWT+ G+V SQ+G L++ SV+EF+R+YFG ++DF+GV A+VVV F+V FA
Sbjct: 181 CPVAWTIYGMVASQFGDIEHILESDDVSVKEFIRSYFGMKHDFIGVCAVVVVGFAVGFAF 360
Query: 1411 IFTFGIKAFNFQKR 1424
IF K FNF +R
Sbjct: 361 IFAVSFKVFNFPRR 402
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 667 VLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVAPNSNETLGVSILK- 725
+ GFV+ R + W+ W YW+ P+ + + ++F + E+ VS+ +
Sbjct: 115 LFSGFVVPRPRIPVWWRWYYWACPVAWTIYGMVASQF------GDIEHILESDDVSVKEF 276
Query: 726 SRGFFPQAYWYWIGVGALIGYVFLFNFLFALALHF 760
R +F + + IGV A++ F F F A+ F
Sbjct: 277 IRSYFGMKHDF-IGVCAVVVVGFAVGFAFIFAVSF 378
>BP029778
Length = 438
Score = 174 bits (442), Expect = 7e-44
Identities = 87/136 (63%), Positives = 105/136 (76%)
Frame = -2
Query: 806 SENKASSSGRKGMVLPFQPLSLTFDDITYSVDMPQGMKNQGVTEDRLELLKGVSGAFRPG 865
S++ KGM+LPFQ ++TF ++ Y VDMPQ ++ QG+ E +L+LL VSG F PG
Sbjct: 422 SKSNGGDHKNKGMILPFQQFTVTFHNVNYYVDMPQEIRKQGIIETKLKLLSNVSGVFAPG 243
Query: 866 VLTALMGVSGAGKTTLMDVLAGIKTSGYIEGNIKVSGYQKNQKSFARISGYCEQFDIHSP 925
VLTALMG SGAGKTTLMDVLAG KT GYIEG+IK+SGY K Q +FAR++GY EQ DIHSP
Sbjct: 242 VLTALMGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKVQHTFARVAGYVEQNDIHSP 63
Query: 926 NVTVYESLLYSAWLRL 941
VTV ESLL+SA LRL
Sbjct: 62 QVTVEESLLFSALLRL 15
Score = 55.5 bits (132), Expect = 6e-08
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = -2
Query: 151 QLHILQNVSGILKPRRMTLLLGPPGSGKTTLLLALAGILGKDLKQSGRVTYNGKGLEEFV 210
+L +L NVSG+ P +T L+G G+GKTTL+ LAG + G + +G +
Sbjct: 287 KLKLLSNVSGVFAPGVLTALMGSSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKVQHT 111
Query: 211 PQRTSAYVSQYDNHIGEMTVRETLAFSA 238
R + YV Q D H ++TV E+L FSA
Sbjct: 110 FARVAGYVEQNDIHSPQVTVEESLLFSA 27
>BP042918
Length = 412
Score = 150 bits (380), Expect = 1e-36
Identities = 65/136 (47%), Positives = 94/136 (68%)
Frame = -3
Query: 566 TIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFK 625
TI +LP+FYK RD LF+P+W Y++P ++L+IPI+I E +W I+YY GF P RFFK
Sbjct: 410 TIQRLPVFYKHRDHLFHPAWTYTVPNFLLRIPISIFESLVWVAITYYTTGFAPEASRFFK 231
Query: 626 QSLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWG 685
Q LVV I QMA+ +FR ++ + R +++ANT G LL V +LGGF++ + + W++W
Sbjct: 230 QLLVVFLIQQMAAGMFRLISGVCRTMIIANTGGALMLLLVFLLGGFLLPKRAIPDWWVWA 51
Query: 686 YWSSPLMYGQNAIAVN 701
YW SPL Y N++ VN
Sbjct: 50 YWISPLSYAFNSLTVN 3
Score = 60.1 bits (144), Expect = 2e-09
Identities = 36/135 (26%), Positives = 60/135 (43%), Gaps = 5/135 (3%)
Frame = -3
Query: 1235 VFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWNLFFTY 1294
VFY+ R + A Y + ++ +P + +++V+ I Y GF AS+ L +
Sbjct: 392 VFYKHRDHLFHPAWTYTVPNFLLRIPISIFESLVWVAITYYTTGFAPEASRFFKQLLVVF 213
Query: 1295 F-----SFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYY 1349
+ ++ G+ I N A +L F L GF++P IP WW W Y
Sbjct: 212 LIQQMAAGMFRLISGVCRTMIIANTGGALMLLLVF-----LLGGFLLPKRAIPDWWVWAY 48
Query: 1350 WICPVAWTLNGLVTS 1364
WI P+++ N L +
Sbjct: 47 WISPLSYAFNSLTVN 3
>AV408313
Length = 342
Score = 147 bits (372), Expect = 9e-36
Identities = 66/113 (58%), Positives = 81/113 (71%)
Frame = +3
Query: 1097 ITSAGKEANLKVNFTDVYKNSELHRRNKQLIQELSVPSQSSKDLHFDAQYSQTFLAQCTY 1156
+TS+ +E + V+F YKNSEL+RRNKQLI EL +P+ S DL+F QYSQ+FL QC
Sbjct: 3 VTSSAQEVTIGVDFHQTYKNSELYRRNKQLIAELGIPAPGSNDLYFPTQYSQSFLVQCLA 182
Query: 1157 CLWKQHLSYWRNTSYTAVRLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGS 1209
CLWKQH SYWRN YTAVR FT ++FG +FW +G K K QDLFNA+GS
Sbjct: 183 CLWKQHWSYWRNPPYTAVRFFFTTFIALIFGTMFWDLGGKYKNRQDLFNALGS 341
>CB828965
Length = 436
Score = 125 bits (315), Expect = 4e-29
Identities = 54/101 (53%), Positives = 74/101 (72%), Gaps = 4/101 (3%)
Frame = +1
Query: 1328 WCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGHNMDTLD----NGQSVEEFV 1383
W LFSGF+IP ++IPIWW+WYYW PVAWT+ GLVTSQ G T++ +V++++
Sbjct: 7 WNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSTIEVPGFRPMTVKDYL 186
Query: 1384 RNYFGFEYDFLGVVAIVVVSFSVLFALIFTFGIKAFNFQKR 1424
FGF++DFLGVVA+ ++FS+LF +F +GIK NFQKR
Sbjct: 187 ERQFGFQHDFLGVVALTHIAFSLLFLFVFAYGIKFLNFQKR 309
Score = 36.6 bits (83), Expect = 0.029
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Frame = +1
Query: 667 VLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVAPNSNETL---GVSI 723
+ GF+I R + W+ W YW+SP+ + + ++ + N T+ G
Sbjct: 13 LFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQ---------VGDKNSTIEVPGFRP 165
Query: 724 LKSRGFFPQAYWY---WIGVGAL--IGYVFLFNFLFALALHFLS 762
+ + + + + + ++GV AL I + LF F+FA + FL+
Sbjct: 166 MTVKDYLERQFGFQHDFLGVVALTHIAFSLLFLFVFAYGIKFLN 297
>TC9904 weakly similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter,
partial (6%)
Length = 547
Score = 104 bits (260), Expect = 9e-23
Identities = 45/97 (46%), Positives = 65/97 (66%), Gaps = 5/97 (5%)
Frame = +1
Query: 1333 GFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQY-----GHNMDTLDNGQSVEEFVRNYF 1387
GF IP +IP WW WYYWICPVAWT+ GL+ S Y G ++ + ++++++ +++
Sbjct: 1 GFFIPNPKIPKWWVWYYWICPVAWTVYGLIVSPYRDITPGLSVPGRSDQPALKDYIEDHY 180
Query: 1388 GFEYDFLGVVAIVVVSFSVLFALIFTFGIKAFNFQKR 1424
GF+ DF+G VA V+V+F V FA +F F IK NFQ R
Sbjct: 181 GFKSDFMGPVACVLVAFPVFFAFVFAFAIKVLNFQTR 291
Score = 30.8 bits (68), Expect = 1.6
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +1
Query: 670 GFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVAPNSNETLGVSILKSRGF 729
GF I + KW++W YW P+ + + V+ + R + P + + +
Sbjct: 1 GFFIPNPKIPKWWVWYYWICPVAWTVYGLIVSPY-----RDITPGLSVPGRSDQPALKDY 165
Query: 730 FPQAYWY---WIGVGA--LIGYVFLFNFLFALALHFLS 762
Y + ++G A L+ + F F+FA A+ L+
Sbjct: 166 IEDHYGFKSDFMGPVACVLVAFPVFFAFVFAFAIKVLN 279
>AW720269
Length = 524
Score = 91.3 bits (225), Expect = 1e-18
Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Frame = +3
Query: 852 LELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG-IKTSGYIEGNIKVSGYQKNQKSF 910
+ +LK VS R + A++G SG GK+TL+ ++AG +K + I ++ + +
Sbjct: 48 VNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDRDFDPKTISINDHPMTSPAQ 227
Query: 911 AR-ISGYCEQFDIHSPNVTVYESLLYSAWLRLSPEVDHATRKMFIEEVMELVELNSLREA 969
R I G+ Q D P +TV E+LL+SA RL E+ R+M +E +M+ + L + ++
Sbjct: 228 LRKICGFVAQEDNLLPLLTVKETLLFSAKFRLK-EMTPNDREMRVESLMQELGLFHVSDS 404
Query: 970 LVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009
VG G+S +RKR++I V+++ NP I+ +DEPTSGL
Sbjct: 405 FVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGL 524
Score = 75.5 bits (184), Expect = 6e-14
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +3
Query: 150 KQLHILQNVSGILKPRRMTLLLGPPGSGKTTLLLALAGILGKDLKQSGRVTYNGKGLEEF 209
K ++IL++VS + + + ++GP G+GK+TLL +AG + ++ N +
Sbjct: 42 KPVNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDRDFDPKTISINDHPMTSP 221
Query: 210 VPQRT-SAYVSQYDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRKEKESKIEPDPDI 268
R +V+Q DN + +TV+ETL FSA+ + L E+ ++E ++E
Sbjct: 222 AQLRKICGFVAQEDNLLPLLTVKETLLFSAKFR--------LKEMTPNDREMRVES---- 365
Query: 269 NAYMKEAAIEGHQNSVVIDYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGP 328
+++ LGL +D+ VGD+ RGISGGE+KR++ G ++
Sbjct: 366 --------------------LMQELGLFHVSDSFVGDEENRGISGGERKRVSIGVDMIHN 485
Query: 329 IKVLFMDEISNGL 341
+L +DE ++GL
Sbjct: 486 PPILLLDEPTSGL 524
>AV771159
Length = 486
Score = 70.1 bits (170), Expect = 2e-12
Identities = 42/106 (39%), Positives = 64/106 (59%)
Frame = -3
Query: 992 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDSFDELLL 1051
+L+ +PS++ +DEPTSGLD+ A ++ T+ GRTVV TIHQPS ++ FD+++L
Sbjct: 343 KLLIHPSLLLLDEPTSGLDSTTALRILNTIPRLATGGRTVVTTIHQPSSRLYYMFDKVVL 164
Query: 1052 LKLGGEQIYAGPIGNQCSDLIQYFEAIQGVPTIKDGYNPATWMLEI 1097
L G IY GP S ++YF ++ G T NPA +L++
Sbjct: 163 LS-EGCPIYYGP----ASTALEYFSSV-GFSTCVT-VNPADLLLDL 47
Score = 63.9 bits (154), Expect(2) = 7e-17
Identities = 34/101 (33%), Positives = 60/101 (58%)
Frame = -3
Query: 323 EMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHILNGTALVSLLQPAPETYELFDDI 382
++L+ P +L +DE ++GLDS+T +I+N+I + + T + ++ QP+ Y +FD +
Sbjct: 343 KLLIHP-SLLLLDEPTSGLDSTTALRILNTIPR-LATGGRTVVTTIHQPSSRLYYMFDKV 170
Query: 383 ILLTDGQIVYQGPREYVLEFFESTGFKCPERKGVADFLQEV 423
+LL++G +Y GP LE+F S GF AD L ++
Sbjct: 169 VLLSEGCPIYYGPASTALEYFSSVGFSTCVTVNPADLLLDL 47
Score = 41.6 bits (96), Expect(2) = 7e-17
Identities = 17/45 (37%), Positives = 29/45 (63%)
Frame = -2
Query: 286 IDYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGPIK 330
++ ++ LGL C +M+G ++RGISG EK+R++ G+ P K
Sbjct: 458 VERVITELGLSGCRSSMIGGPLLRGISGAEKRRVSIGQETAHPSK 324
>AV416268
Length = 424
Score = 78.6 bits (192), Expect = 7e-15
Identities = 46/132 (34%), Positives = 78/132 (58%), Gaps = 3/132 (2%)
Frame = +3
Query: 927 VTVYESLLYSAWLRLSPEVDHATRKMFIEEVMELVELNSLREALVGLPGENGLSTEQRKR 986
+TV E++ YSA L+L + + ++ + ++ + L +G G G+S Q++R
Sbjct: 12 LTVGEAVYYSAHLQLPDSMSKSEKRERADFTIKEMGLQDAINTRIGGWGSKGVSGGQKRR 191
Query: 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR--NTVD-TGRTVVCTIHQPSIDIF 1043
++I +E++ +P ++F+DEPTSGLD+ A+ V+ + N D RT+V +IHQPS +IF
Sbjct: 192 VSICIEILTHPRLLFLDEPTSGLDSAASYHVISRISSLNKKDGIQRTIVASIHQPSNEIF 371
Query: 1044 DSFDELLLLKLG 1055
F L LL G
Sbjct: 372 QLFHSLCLLSSG 407
Score = 67.8 bits (164), Expect = 1e-11
Identities = 36/109 (33%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Frame = +3
Query: 287 DYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTT 346
D+ +K +GL +T +G +G+SGG+K+R++ ++ ++LF+DE ++GLDS+ +
Sbjct: 96 DFTIKEMGLQDAINTRIGGWGSKGVSGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAAS 275
Query: 347 FQIINSIKQSIHILNG---TALVSLLQPAPETYELFDDIILLTDGQIVY 392
+ +I+ I S++ +G T + S+ QP+ E ++LF + LL+ G+ VY
Sbjct: 276 YHVISRI-SSLNKKDGIQRTIVASIHQPSNEIFQLFHSLCLLSSGKTVY 419
>BP049546
Length = 511
Score = 75.9 bits (185), Expect = 4e-14
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = -1
Query: 1348 YYWICPVAWTLNGLVTSQYGHNMDTL----DNGQSVEEFVRNYFGFEYDFLGVVAIVVVS 1403
YYW PVAW+LNGL+TSQ G+ + D +V++F++ G+ YDFL +A V
Sbjct: 511 YYWASPVAWSLNGLITSQLGNKDAEVVIPGDGSMTVKQFLKENLGYHYDFLPAIAAAHVG 332
Query: 1404 FSVLFALIFTFGIKAFNFQKR 1424
+ +LF F FGIK N+QKR
Sbjct: 331 WVLLFGCGFAFGIKFLNYQKR 269
>TC18647 similar to UP|Q9ASR9 (Q9ASR9) At2g01320/F10A8.20, partial (17%)
Length = 430
Score = 64.3 bits (155), Expect = 1e-10
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +1
Query: 147 SPKKQLHILQNVSGILKPRRMTLLLGPPGSGKTTLLLALAGILGKD--LKQSGRVTYNGK 204
S K +L+NVSG KP R+ ++GP GSGKTTLL LAG L L SG + +NGK
Sbjct: 85 SSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGK 264
Query: 205 GLEEFVPQRTSAYVSQYDNHIGEMTVRETLAFSARCQ 241
+ + AYV Q D ++TVRETL+ + Q
Sbjct: 265 PGSKNAYK--FAYVRQEDLFFSQLTVRETLSLATELQ 369
Score = 57.4 bits (137), Expect = 2e-08
Identities = 43/105 (40%), Positives = 57/105 (53%), Gaps = 7/105 (6%)
Frame = +1
Query: 854 LLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG-------IKTSGYIEGNIKVSGYQKN 906
LLK VSG +PG L A+MG SG+GKTTL++VLAG + SG +E N K KN
Sbjct: 106 LLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPG--SKN 279
Query: 907 QKSFARISGYCEQFDIHSPNVTVYESLLYSAWLRLSPEVDHATRK 951
FA Y Q D+ +TV E+L + L+L P + A +
Sbjct: 280 AYKFA----YVRQEDLFFSQLTVRETLSLATELQL-PNISSAEER 399
>BP071638
Length = 406
Score = 63.9 bits (154), Expect = 2e-10
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = -2
Query: 1383 VRNYFGFEYDFLGVVAIVVVSFSVLFALIFTFGIKAFNFQKR 1424
VR+YFGF++DFLGVVA V+V+F V+FAL+F IK FNFQ+R
Sbjct: 405 VRDYFGFKHDFLGVVAAVIVAFPVVFALVFAISIKMFNFQRR 280
>BP075566
Length = 253
Score = 44.7 bits (104), Expect(2) = 4e-10
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 277 IEGHQNSVVIDYILKILGLDVCADTMVGDQMIRG 310
++G + S++ DY L +LGLD+C DT++GD M RG
Sbjct: 184 VKGTETSLITDYTLTLLGLDICKDTLLGDDMHRG 83
Score = 37.7 bits (86), Expect(2) = 4e-10
Identities = 17/26 (65%), Positives = 24/26 (91%), Gaps = 1/26 (3%)
Frame = -2
Query: 311 ISGGEKKRLTTGEMLVGPIK-VLFMD 335
+SGG+KKR+TTGEM+VGP + +L+MD
Sbjct: 81 LSGGQKKRVTTGEMIVGPTQHLLWMD 4
>BE122583
Length = 361
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 30/76 (39%), Positives = 42/76 (54%)
Frame = +3
Query: 771 LSQEKLQERNASTDEEFIQSQQQENSSNTKMDEEVSENKASSSGRKGMVLPFQPLSLTFD 830
LS + AS E F + +E + + +EN S +KGMVLPFQPLSL F+
Sbjct: 48 LSTVVTDKNTASNAEGFEGNDMEEKNITHSSIPKAAENAKS---KKGMVLPFQPLSLAFE 218
Query: 831 DITYSVDMPQGMKNQG 846
++ Y ++MP MK QG
Sbjct: 219 NVNYYIEMPNEMKKQG 266
Score = 24.6 bits (52), Expect(2) = 3e-09
Identities = 11/17 (64%), Positives = 13/17 (75%)
Frame = +1
Query: 862 FRPGVLTALMGVSGAGK 878
F+ TAL+GVSGAGK
Sbjct: 310 FQASDFTALVGVSGAGK 360
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,761,394
Number of Sequences: 28460
Number of extensions: 315286
Number of successful extensions: 2093
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of query: 1424
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1322
effective length of database: 1,994,680
effective search space: 2636966960
effective search space used: 2636966960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144617.9