BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144564.17 - phase: 0
(559 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP062644 132 2e-31
AU089074 128 3e-30
BF177869 105 2e-23
BP075076 90 1e-18
BP069747 48 5e-06
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 44 7e-05
BU494405 43 1e-04
TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%) 41 6e-04
BP044109 40 0.001
AI967476 40 0.001
TC9801 homologue to UP|Q8LAC6 (Q8LAC6) Glycine rich protein-like... 38 0.005
BP039012 38 0.005
AV408970 38 0.005
TC14416 similar to UP|Q8SMH8 (Q8SMH8) RNA-binding protein, parti... 37 0.006
TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%) 37 0.008
TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%) 37 0.008
TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific... 37 0.008
TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive elemen... 37 0.011
AV410227 36 0.014
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 36 0.014
>BP062644
Length = 526
Score = 132 bits (331), Expect = 2e-31
Identities = 72/110 (65%), Positives = 82/110 (74%), Gaps = 11/110 (10%)
Frame = +1
Query: 1 MASAVLANRNEPNWPQHRGGGA---GFMGKVPYAN----PNPNPKF---KRNQSPSDDAS 50
MASAVLANRNEPNWPQ GGA GFM K PY N PNPNPKF KR QSPSDDAS
Sbjct: 193 MASAVLANRNEPNWPQQHRGGATATGFMAKTPYPNSNPNPNPNPKFLNNKRTQSPSDDAS 372
Query: 51 SINRRSNDVVTN-HSQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTR 99
SINRRSND V+N +S Y TFN++SYSK EL+EL+ +ELE +RQ++ R
Sbjct: 373 SINRRSNDAVSNGYSNYATFNIASYSKKELSELKARLQSELEIVRQVKLR 522
>AU089074
Length = 244
Score = 128 bits (321), Expect = 3e-30
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +1
Query: 151 ACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEF 210
+C Q+LQKLMK K GWIF+ PVD V + LHDY++IIK PMDLGTVK+ L+KN Y+TP EF
Sbjct: 1 SCVQVLQKLMKHKHGWIFNVPVDAVGMGLHDYYEIIKKPMDLGTVKANLSKNVYATPEEF 180
Query: 211 ADDVKLTFKNALTYNPKGHDV 231
A DV+LTF NALTYNPKGHDV
Sbjct: 181 ASDVRLTFNNALTYNPKGHDV 243
>BF177869
Length = 509
Score = 105 bits (262), Expect = 2e-23
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Frame = +2
Query: 423 RQALMDN--NNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTV-DEDVDIGDDMPANDF 479
R+AL+DN NV SNK NGELP +KV+ P KK KK++ DEDVDIGD+MP ++F
Sbjct: 11 REALLDNLNPNVASNKDNGELPACDKVEPAPVEVVKKPKKVEAAGDEDVDIGDEMPMSEF 190
Query: 480 PPVEIEKDKDMGGTGGRASSSSSGSSSSGSGDSSSSET 517
PPVEIEKDKD+ G ASSSS SSSS SG SSSS++
Sbjct: 191 PPVEIEKDKDV--AAGHASSSSGSSSSSSSGSSSSSDS 298
>BP075076
Length = 527
Score = 89.7 bits (221), Expect = 1e-18
Identities = 50/122 (40%), Positives = 66/122 (53%), Gaps = 15/122 (12%)
Frame = -1
Query: 122 NKKFSGNKRPFPAEKELKRSK--------SEVGSAM-------KACGQILQKLMKTKIGW 166
N +F K FP + K+SK E G + K+C +L+KLMK +GW
Sbjct: 377 NSEFLLAKDKFPPAESNKKSKLHWKKQGAGEFGHGLRMGSKFFKSCSSLLEKLMKHSLGW 198
Query: 167 IFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNP 226
+F++PVD L LHDYF II HPMDLGTVK++L KN + F A+TYNP
Sbjct: 197 VFNTPVDVEGLGLHDYFTIITHPMDLGTVKTRLNKNLVHIT*GICRGCETHFSYAMTYNP 18
Query: 227 KG 228
+G
Sbjct: 17 EG 12
>BP069747
Length = 436
Score = 47.8 bits (112), Expect = 5e-06
Identities = 30/101 (29%), Positives = 52/101 (50%), Gaps = 2/101 (1%)
Frame = -1
Query: 155 ILQKLMKTKIGWIFSSPVDPVALN--LHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFAD 212
IL+++M + GW F P+DP L + K + ++SKL YS P +F D
Sbjct: 433 ILKRMMIGRDGWAFKHPLDPFDSESLLMEKNKKKKPILGFVDIESKLKNWLYSEPEQFVD 254
Query: 213 DVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKF 253
D++ F +AL Y P +V+ +L + FE + +++K+
Sbjct: 253 DMRNVFSHALMY-PSRSEVHIIGRRLSDNFEHNWTTLKKKW 134
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 43.9 bits (102), Expect = 7e-05
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPL--KQPKPKAR 344
PIPP P S PS +N PP +P +TPSPT P PL K P P ++
Sbjct: 79 PIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPISQ 258
Query: 345 DPN 347
P+
Sbjct: 259 PPH 267
Score = 37.7 bits (86), Expect = 0.005
Identities = 20/63 (31%), Positives = 26/63 (40%), Gaps = 2/63 (3%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP--VKPLKQPKPKAR 344
P PP P + N PS + PP +P +TPSPT P P P ++
Sbjct: 319 PTPPKTPSPTSQPPHTPTPPNTPSPISQPPYTPTPPKTPSPTNQPPHIPSPPNSSSPTSQ 498
Query: 345 DPN 347
PN
Sbjct: 499 PPN 507
Score = 37.4 bits (85), Expect = 0.006
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +1
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNP---PPLAQSPVRTPSPTRALPVKPL--KQPK 340
IP+PP K + +P PST +P PP +P +TPSPT P P P
Sbjct: 220 IPLPP---KTPSPISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNTPS 390
Query: 341 PKARDP 346
P ++ P
Sbjct: 391 PISQPP 408
Score = 35.8 bits (81), Expect = 0.019
Identities = 21/63 (33%), Positives = 24/63 (37%), Gaps = 2/63 (3%)
Frame = +1
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPL--KQPKPKA 343
IP PP P PS S PP SP + PSP P P K P P +
Sbjct: 28 IPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTS 207
Query: 344 RDP 346
+ P
Sbjct: 208 QPP 216
Score = 35.4 bits (80), Expect = 0.025
Identities = 21/63 (33%), Positives = 26/63 (40%), Gaps = 2/63 (3%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP--VKPLKQPKPKAR 344
P PP P + PS +N PP SP + SPT P P K P P ++
Sbjct: 367 PTPPNTPSPISQPPYTPTPPKTPSPTNQPPHIPSPPNSSSPTSQPPNTPSPPKTPSPTSQ 546
Query: 345 DPN 347
PN
Sbjct: 547 PPN 555
Score = 34.7 bits (78), Expect = 0.042
Identities = 23/64 (35%), Positives = 29/64 (44%)
Frame = +1
Query: 284 NPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKA 343
+P+ PP + P P T PS N PP P +TPSP+ + P P PKA
Sbjct: 4 SPVYTPPSI-------PTPPKT---PSPGNQPPHTPIPPKTPSPSYSPPNVP---SPPKA 144
Query: 344 RDPN 347
PN
Sbjct: 145 PSPN 156
Score = 34.3 bits (77), Expect = 0.055
Identities = 19/64 (29%), Positives = 26/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPL--KQPKPKA 343
+P PP P + PS ++ PP +P TPSP P P K P P
Sbjct: 268 VPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPNTPSPISQPPYTPTPPKTPSPTN 447
Query: 344 RDPN 347
+ P+
Sbjct: 448 QPPH 459
Score = 32.3 bits (72), Expect = 0.21
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPL--KQPKPKAR 344
P P + +P P T PS + PP +P TPSP P P K P P ++
Sbjct: 184 PKTPSPTSQPPYIPLPPKT---PSPISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQ 354
Query: 345 DPN 347
P+
Sbjct: 355 PPH 363
Score = 31.6 bits (70), Expect = 0.35
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +1
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP--VKPLKQPKPKA 343
+P PP P + PS ++ PP P +TPSP P P P P +
Sbjct: 124 VPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPISQPPHVPTPPSTPSPIS 303
Query: 344 RDP 346
+ P
Sbjct: 304 QPP 312
Score = 30.0 bits (66), Expect = 1.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 309 PSTSNPPPLAQSPVRTPSPTRALPVKPL--KQPKPKARDPN 347
PS PP +P +TPSP P P+ K P P PN
Sbjct: 1 PSPVYTPPSIPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPN 123
>BU494405
Length = 563
Score = 43.1 bits (100), Expect = 1e-04
Identities = 30/95 (31%), Positives = 45/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 PAEKELKRSKSEVGSAMKACGQILQKLMKTK--IGWIFSSPVDPVALNLHDYFDIIKHPM 190
P K + EVG A G I+ L+K + + ++F PV DYFDII+ PM
Sbjct: 154 PPTKRRRGGGGEVGLANILEG-IVDVLVKDRHDLSYLFQKPVSKK--EAPDYFDIIERPM 324
Query: 191 DLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYN 225
DL ++ ++ Y + +F D+ NA YN
Sbjct: 325 DLSRIRERVRNMEYKSREDFRHDIWQITYNAHKYN 429
>TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%)
Length = 467
Score = 40.8 bits (94), Expect = 6e-04
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +3
Query: 274 RERERVKKKDNPIPIPPPVAKRQELLP------EPASTSNQPSTSNPPPLAQ--SPVRTP 325
R R R +K +P P PPP + P P N P++S PPP A+ R+P
Sbjct: 105 RRRRRRNRKPSPAPPPPPGSPISSPKPPRNPRISPPRPPNMPTSSKPPPSAKRIRSSRSP 284
Query: 326 SPTRALPVKP 335
+P+ +LP P
Sbjct: 285 TPSPSLPNSP 314
Score = 26.9 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 307 NQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQP 339
N+ + PPP SP+ +P P R + P + P
Sbjct: 123 NRKPSPAPPPPPGSPISSPKPPRNPRISPPRPP 221
>BP044109
Length = 497
Score = 40.0 bits (92), Expect = 0.001
Identities = 27/86 (31%), Positives = 37/86 (42%), Gaps = 10/86 (11%)
Frame = +3
Query: 276 RERVKKKDNPIPIPPPVAKR--------QELLPEPASTSNQPSTSNPPPLAQSPVRTPSP 327
R R ++ + +P PP R + LLP S +QPS NPP L + P P
Sbjct: 132 RTRTRQPHHTLPTLPPNQHRAPKPRLHLRRLLPHHPSLLHQPSPQNPPLLPRKPPPPPHM 311
Query: 328 TRALPVKPLKQPK--PKARDPNKREM 351
R P PL P+ P+ R +M
Sbjct: 312 ARLQPFPPLHPPQLPPRLRPRRALQM 389
Score = 35.4 bits (80), Expect = 0.025
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 21/86 (24%)
Frame = +2
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNP----------------PPLAQSPVRTPSPT-- 328
P PP + P P++ + +PSTS P PP + +P TPSP
Sbjct: 203 PTTPPPSPTSSPKPPPSTFATKPSTSPPETPSSSSHGPAPTLPSPPSSSTPTSTPSPPSP 382
Query: 329 ---RALPVKPLKQPKPKARDPNKREM 351
LP P P P P R M
Sbjct: 383 PNGSTLPSPPRATPTPAPSLPAARRM 460
>AI967476
Length = 397
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/161 (24%), Positives = 65/161 (40%)
Frame = +3
Query: 220 NALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPERERERV 279
NA+TYNP+G+DV+ A L + FE ++ I++K P ++ +R
Sbjct: 36 NAMTYNPRGNDVHIMADTLSKYFEVRWKSIEKKL------------------PRKDAQR- 158
Query: 280 KKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQP 339
LP +TS+ T P P PS R L P
Sbjct: 159 -------------------LPTKPATSDDVETIRPVP--------PSKKRKL---ISLSP 248
Query: 340 KPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRK 380
+P+ P K+ M+ +EK L L+ L E+ ++ +++
Sbjct: 249 QPEVMPPAKQVMSDQEKLCLRRELESLLEEEPVHIIDFLKE 371
>TC9801 homologue to UP|Q8LAC6 (Q8LAC6) Glycine rich protein-like, complete
Length = 981
Score = 37.7 bits (86), Expect = 0.005
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -1
Query: 273 ERERERVKKKDNPIPIP----PPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPT 328
ER+ R+ K+ P+P+P PP + LP P S P P A P P+P+
Sbjct: 579 ERQELRITCKNQPLPLPAPLLPPGFPPKPPLPRPPGPLAPSSKPRPGPFAGRP---PAPS 409
Query: 329 RALPVKPLKQPKP 341
+LP PL +P P
Sbjct: 408 -SLPPLPLPRPTP 373
>BP039012
Length = 582
Score = 37.7 bits (86), Expect = 0.005
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKP 335
+P P P A + P P+ ++ P TS PPP + SP +P+PT A P +P
Sbjct: 413 LPRPQPAAGPARV-PPPS*PTSSP-TSTPPPRSSSPSASPTPTAASPSRP 556
>AV408970
Length = 195
Score = 37.7 bits (86), Expect = 0.005
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +2
Query: 284 NPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP 332
+P P PPPV P P S P+TS+ PP A SP P P P
Sbjct: 50 SPAPSPPPVPLSAASAPSPPPPS-PPATSSSPPSAPSPPAPPPPPTTTP 193
>TC14416 similar to UP|Q8SMH8 (Q8SMH8) RNA-binding protein, partial (28%)
Length = 695
Score = 37.4 bits (85), Expect = 0.006
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Frame = +2
Query: 291 PVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPK-PKARDPNKR 349
P +L P+P+++++ PST + PL+ SP P PT ALP +P P+ P K
Sbjct: 188 PNTSSSQLPPDPSNSNSHPSTLH--PLSPSP---PQPTTALP-RPSSSPRLPTGPSKKKT 349
Query: 350 EMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWE--L 407
+ + K + P V+ ++ R E++ EI + + L +
Sbjct: 350 TRSPSKTKKKEQKVSAKPKRVGNPTVKTLKSRVLKKEKEKKEITRNHQKRLNSLLGTCLM 529
Query: 408 DRLVTNWKKMVSKIK 422
+VTNW +K++
Sbjct: 530 MLMVTNWPNFSTKLE 574
>TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%)
Length = 799
Score = 37.0 bits (84), Expect = 0.008
Identities = 23/64 (35%), Positives = 30/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 285 PIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPV--KPLKQPKPK 342
P PI PP Q P A+ N S ++ PP Q+P TPSP+ P P K P
Sbjct: 25 PAPIKPPSPTSQP--PYIATPPNTHSPTSQPPNTQTPANTPSPSSQPPYLSTPPKSNSPT 198
Query: 343 ARDP 346
++ P
Sbjct: 199 SQPP 210
Score = 31.6 bits (70), Expect = 0.35
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPV 333
I PP P + +N PS S+ PP +P ++ SPT PV
Sbjct: 70 IATPPNTHSPTSQPPNTQTPANTPSPSSQPPYLSTPPKSNSPTSQPPV 213
Score = 27.3 bits (59), Expect = 6.7
Identities = 21/58 (36%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Frame = +1
Query: 284 NPIPIPPPVAKRQELLPEPASTSNQPSTSNPP---PLAQSP------VRTPSPTRALP 332
NP + P ++ L PAST P+T++PP P A+SP TPSP+ P
Sbjct: 292 NPPSLAPSISTSPPALT-PASTP-VPATASPPSQSPSAESPGASLPAATTPSPSSTTP 459
>TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%)
Length = 1751
Score = 37.0 bits (84), Expect = 0.008
Identities = 19/59 (32%), Positives = 26/59 (43%), Gaps = 4/59 (6%)
Frame = +3
Query: 285 PIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRAL----PVKPLKQP 339
P+P PP +P P S +TS+PPP P P P+ L P P ++P
Sbjct: 120 PLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVPRRKP 296
Score = 28.5 bits (62), Expect = 3.0
Identities = 21/57 (36%), Positives = 24/57 (41%)
Frame = +3
Query: 285 PIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKP 341
P P+ PP L P P S S+ +T PP P T SP A P P P P
Sbjct: 96 PSPLQPP----PPLPPSPPSLSS-AATVPSPPYPSPPAATSSPPPA-PSPPAPPPPP 248
>TC14326 weakly similar to UP|EXLP_TOBAC (Q03211) Pistil-specific
extensin-like protein precursor (PELP), partial (11%)
Length = 630
Score = 37.0 bits (84), Expect = 0.008
Identities = 21/69 (30%), Positives = 29/69 (41%), Gaps = 7/69 (10%)
Frame = +2
Query: 285 PIPIP-PPVAKRQELLPEPASTSNQPSTSNPP------PLAQSPVRTPSPTRALPVKPLK 337
P+ P PP+ K P P + P +PP P+ +SP P P +A +K
Sbjct: 242 PVKAPSPPIVKSPPYFPPPVKAPSPPIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVK 421
Query: 338 QPKPKARDP 346
P KA P
Sbjct: 422 SPPVKAPTP 448
Score = 35.8 bits (81), Expect = 0.019
Identities = 20/67 (29%), Positives = 28/67 (40%), Gaps = 7/67 (10%)
Frame = +2
Query: 282 KDNPIPIP-PPVAKRQELLPEPASTSNQPSTSNPP------PLAQSPVRTPSPTRALPVK 334
K P+ P PP+ K P P + P +PP P+ +SP P P +A
Sbjct: 326 KSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPIVKSPPYYPPPVKAPTPP 505
Query: 335 PLKQPKP 341
+K P P
Sbjct: 506 QVKTPPP 526
Score = 32.3 bits (72), Expect = 0.21
Identities = 17/52 (32%), Positives = 23/52 (43%)
Frame = +2
Query: 290 PPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKP 341
PP+ K P+P + P PP PV+ PSP + P+K P P
Sbjct: 203 PPLVKAPTPPPQPPVKAPSPPIVKSPPYFPPPVKAPSPP-IVKSPPVKAPTP 355
Score = 30.8 bits (68), Expect = 0.60
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Frame = +2
Query: 285 PIPIPPPVAKRQE-------LLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLK 337
P P+ PP L+ P P + PP+ +SP P P +A +K
Sbjct: 149 PSPVKPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYFPPPVKAPSPPIVK 328
Query: 338 QPKPKARDP 346
P KA P
Sbjct: 329 SPPVKAPTP 355
Score = 29.6 bits (65), Expect = 1.3
Identities = 17/56 (30%), Positives = 23/56 (40%), Gaps = 6/56 (10%)
Frame = +2
Query: 299 LPEPASTSNQPSTSNP------PPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNK 348
+P P S P+ S P PPL ++P P P P P+ + P P K
Sbjct: 137 VPAPPSPVKPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYFPPPVK 304
Score = 29.3 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +2
Query: 286 IPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSP--TRALPV--KPLKQPKP 341
+P PP K + P P P Q PV+ PSP ++ P P+K P P
Sbjct: 137 VPAPPSPVKPPTPSTPAVTVPTPPLVKAPTPPPQPPVKAPSPPIVKSPPYFPPPVKAPSP 316
Score = 27.3 bits (59), Expect = 6.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Frame = +2
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNP-----PPLAQS-PVRTPSP--TRALPV--KPL 336
P PP V P P + PS P PP+ +S PV+ P+P ++ P P+
Sbjct: 308 PSPPIVKSPPVKAPTPPIVKSPPSYPPPVKAPSPPIVKSPPVKAPTPPIVKSPPYYPPPV 487
Query: 337 KQPKP 341
K P P
Sbjct: 488 KAPTP 502
>TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (50%)
Length = 1128
Score = 36.6 bits (83), Expect = 0.011
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKA 343
P PP A L P+P S ++ P T+ P P S + T PTRA P+P++
Sbjct: 292 PTTPPPASSAALKPKPTSPNHPPRTTTPDPTTSSSL-TSRPTRAQARAAPWNPQPRS 459
>AV410227
Length = 428
Score = 36.2 bits (82), Expect = 0.014
Identities = 23/70 (32%), Positives = 32/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 278 RVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVR-TPSPTRALPVKPL 336
R + P P PP + P P ST++ +TS PL+ SP TP+P + P P
Sbjct: 85 RCRTSQFPGPH*PPSSNASPPRPPP-STASSSATSPTSPLSTSPTTPTPTPPPSSPPSPA 261
Query: 337 KQPKPKARDP 346
P P + P
Sbjct: 262 SSPPPPSMTP 291
Score = 33.5 bits (75), Expect = 0.093
Identities = 24/65 (36%), Positives = 30/65 (45%), Gaps = 2/65 (3%)
Frame = +1
Query: 285 PIPIPPPVAKRQELLPEPASTSNQPSTSNPPP-LAQSPVRTPSPTRALP-VKPLKQPKPK 342
P P PPP + P + P+ S PPP A SP PS + P V+PL P P
Sbjct: 220 PTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SPPPPPS*AGSPPAVEPLSAP-PC 396
Query: 343 ARDPN 347
A P+
Sbjct: 397 ANSPS 411
Score = 32.7 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = +1
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDP 346
P PPP + S P+T P P SP PSP + P + P P P
Sbjct: 145 PRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSP---PSPASSPPPPSMTPPAPSTPPP 315
Query: 347 N 347
+
Sbjct: 316 S 318
Score = 32.0 bits (71), Expect = 0.27
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 289 PPPVAKRQELLP-EPASTSNQPSTSNPPPLA-QSPVRTPSPTRALPVKPLKQPKPKARDP 346
PP A P P STS T PPP + SP +P P P P P A P
Sbjct: 154 PPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SP 333
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 36.2 bits (82), Expect = 0.014
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 289 PPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKA 343
PP + +PE + T+N P+T+ PPP A SP PSPT + P P P A
Sbjct: 160 PPSSSSSPAPVPE-SPTTNSPTTAPPPPPASSP--PPSPTHS----PSSSPSPSA 303
Score = 32.0 bits (71), Expect = 0.27
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 304 STSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKP 341
S+S S+S+P P+ +SP T SPT A P P P P
Sbjct: 151 SSSPPSSSSSPAPVPESPT-TNSPTTAPPPPPASSPPP 261
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,019,564
Number of Sequences: 28460
Number of extensions: 148201
Number of successful extensions: 4076
Number of sequences better than 10.0: 420
Number of HSP's better than 10.0 without gapping: 2236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3289
length of query: 559
length of database: 4,897,600
effective HSP length: 95
effective length of query: 464
effective length of database: 2,193,900
effective search space: 1017969600
effective search space used: 1017969600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144564.17