BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.3 - phase: 0 /pseudo
(1115 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC20009 homologue to UP|Q9LMQ9 (Q9LMQ9) F7H2.9 protein, partial ... 259 1e-69
BP065469 257 6e-69
TC17663 similar to UP|Q9LRZ0 (Q9LRZ0) Genomic DNA, chromosome 3,... 241 1e-63
BP042463 224 7e-59
AV778645 197 3e-52
BP041884 192 2e-49
TC10552 homologue to UP|Q8H6S5 (Q8H6S5) CTV.2, partial (9%) 174 7e-44
BP073626 168 1e-42
BG662118 160 8e-40
AV410408 158 5e-39
BP039104 130 1e-30
TC14548 127 1e-29
TC18051 124 6e-29
TC8657 67 2e-11
BP042687 48 1e-05
TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-bi... 47 2e-05
AV775170 45 5e-05
BP038344 43 2e-04
AV423929 42 7e-04
TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5,... 40 0.002
>TC20009 homologue to UP|Q9LMQ9 (Q9LMQ9) F7H2.9 protein, partial (13%)
Length = 656
Score = 259 bits (663), Expect = 1e-69
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G WEEVEKYLSGF
Sbjct: 207 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWEEVEKYLSGF 386
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+ KAVEILV DLKVF+TFNEEL+KEITQLLT
Sbjct: 387 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLT 566
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKL 150
L NFRENEQLSKYGDTK+AR I+L+ELKKL
Sbjct: 567 LENFRENEQLSKYGDTKSARAIILVELKKL 656
>BP065469
Length = 528
Score = 257 bits (657), Expect = 6e-69
Identities = 129/133 (96%), Positives = 131/133 (97%)
Frame = +3
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
MTSLSRELVFLILQFL+EE FKESVHKLE+ES FFFNMKYFEEKVQAGEWEEVEKYLSGF
Sbjct: 129 MTSLSRELVFLILQFLDEENFKESVHKLEQESAFFFNMKYFEEKVQAGEWEEVEKYLSGF 308
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT
Sbjct: 309 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 488
Query: 121 LTNFRENEQLSKY 133
LTNFRENEQLSKY
Sbjct: 489 LTNFRENEQLSKY 527
>TC17663 similar to UP|Q9LRZ0 (Q9LRZ0) Genomic DNA, chromosome 3, TAC
clone:K20I9, partial (11%)
Length = 607
Score = 241 bits (614), Expect(2) = 1e-63
Identities = 121/125 (96%), Positives = 123/125 (97%)
Frame = +3
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
MTSLSRELVFLILQFL+EEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYL+GF
Sbjct: 210 MTSLSRELVFLILQFLDEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLTGF 389
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDRQDK KAVEILVGDLKVFSTFNEELY EITQLLT
Sbjct: 390 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVGDLKVFSTFNEELYXEITQLLT 569
Query: 121 LTNFR 125
LTNFR
Sbjct: 570 LTNFR 584
Score = 21.2 bits (43), Expect(2) = 1e-63
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 124 FRENEQLSKY 133
F+ NEQLSKY
Sbjct: 578 FQRNEQLSKY 607
>BP042463
Length = 499
Score = 224 bits (572), Expect(2) = 7e-59
Identities = 108/158 (68%), Positives = 128/158 (80%), Gaps = 1/158 (0%)
Frame = +2
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLFIDH+C+PSNG APTP LPV AVA+P++Y LG GPF
Sbjct: 29 WQHQLCKNPRPNPDIKTLFIDHTCSPSNGARAPTPGPLPVTAVARPSSYAPLGAPG-GPF 205
Query: 241 PPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVEY 300
PPA AN NALAGWM NA+ SSS+Q+ + AS++P P NQVS+LK P TPS T GM++Y
Sbjct: 206 PPAPTAANVNALAGWMMNANPSSSIQSPALAASSMPGPPNQVSVLKHPRTPSNTLGMMDY 385
Query: 301 QSADHEQLMKRLRPAPSVEEVSYPS-ARQASWSLDDLP 337
Q+ADH+ LMKRLR APSV+EV+YP+ +QASWSLDDLP
Sbjct: 386 QNADHDHLMKRLRSAPSVDEVTYPAPPQQASWSLDDLP 499
Score = 21.2 bits (43), Expect(2) = 7e-59
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 172 RTLINQSLN 180
RTLINQSLN
Sbjct: 3 RTLINQSLN 29
>AV778645
Length = 566
Score = 197 bits (502), Expect(2) = 3e-52
Identities = 99/122 (81%), Positives = 109/122 (89%)
Frame = -2
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
MTSLSRELVFLILQFLEEEKFKE+VHKLE+ESGFFF MKYF+EK AGEW+EVEKYLSGF
Sbjct: 439 MTSLSRELVFLILQFLEEEKFKEAVHKLEQESGFFFYMKYFDEKALAGEWDEVEKYLSGF 260
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
KVDD+RYSM+ FFEIRKQKYLEALDR DK KAVEILV DLKVF+ FNEEL+K++ L
Sbjct: 259 IKVDDDRYSMQTFFEIRKQKYLEALDRNDKVKAVEILVNDLKVFAAFNEELFKKLRSL*P 80
Query: 121 LT 122
LT
Sbjct: 79 LT 74
Score = 25.8 bits (55), Expect(2) = 3e-52
Identities = 10/12 (83%), Positives = 12/12 (99%)
Frame = -3
Query: 123 NFRENEQLSKYG 134
+FRENEQLS+YG
Sbjct: 75 HFRENEQLSEYG 40
>BP041884
Length = 489
Score = 192 bits (488), Expect = 2e-49
Identities = 100/165 (60%), Positives = 124/165 (74%), Gaps = 2/165 (1%)
Frame = +3
Query: 183 HQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAH-GPFP 241
HQLCKNPRPNPDIKTLF DH+C+P NG APTPV LP++A A+P+ + L GAH GPF
Sbjct: 3 HQLCKNPRPNPDIKTLFTDHTCSPPNGAHAPTPVTLPISAGARPSFFAPL--GAHGGPFT 176
Query: 242 PAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVEYQ 301
PA AN NALAGWM NA++S+S Q++VV AS+ NQ SILK TP+T GM++YQ
Sbjct: 177 PAPPAANVNALAGWMVNANLSTSAQSSVVAASSFSGHPNQGSILKHSRTPNTL-GMMDYQ 353
Query: 302 SADHEQLMKRLRPAPSVEEVSYPS-ARQASWSLDDLPRTVAMSLH 345
+ DH+ LMKRLR A SV+EV+ P+ +Q SWSLD+LPRTV +LH
Sbjct: 354 NNDHDHLMKRLRTAHSVDEVTNPAPPQQVSWSLDELPRTVVCTLH 488
>TC10552 homologue to UP|Q8H6S5 (Q8H6S5) CTV.2, partial (9%)
Length = 535
Score = 174 bits (441), Expect = 7e-44
Identities = 85/98 (86%), Positives = 94/98 (95%)
Frame = +1
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKESVHKLE+ESGFFFNM++FE+ V GEW+EVEKYLSGF
Sbjct: 241 MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNMRHFEDMVTNGEWDEVEKYLSGF 420
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILV 98
TKVDDNRYSMKIFFEIRKQKYLEALD+QD+ KAVEILV
Sbjct: 421 TKVDDNRYSMKIFFEIRKQKYLEALDKQDRAKAVEILV 534
>BP073626
Length = 310
Score = 168 bits (426), Expect(2) = 1e-42
Identities = 77/95 (81%), Positives = 85/95 (89%)
Frame = +2
Query: 499 VYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSC 558
VYS+CPH+KENIQFIFSTA DGKIKAWLYDNMGSRVDYDAPG C+TM YSADG+RLFSC
Sbjct: 2 VYSVCPHYKENIQFIFSTAWDGKIKAWLYDNMGSRVDYDAPGRGCSTMAYSADGSRLFSC 181
Query: 559 GTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVV 593
GTSKDG+S +VEWNESEGA+KRTY GF K GV+
Sbjct: 182 GTSKDGESAIVEWNESEGALKRTYQGFSKTIFGVL 286
Score = 23.1 bits (48), Expect(2) = 1e-42
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 591 GVVQFDTTQN 600
GVVQFDTT+N
Sbjct: 280 GVVQFDTTKN 309
>BG662118
Length = 421
Score = 160 bits (406), Expect = 8e-40
Identities = 96/140 (68%), Positives = 101/140 (71%)
Frame = +1
Query: 822 QFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRFWLSTLKITTS*PLGW 881
+F HSQ+M HM CL V ERF YLT**HSR** H +HL L F LS L+ITT PLGW
Sbjct: 1 EFGTRHSQKMTHMSCLPVAERFHYLT**HSR**PHLCNHLLHLPF*LSILRITTLLPLGW 180
Query: 882 RIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLMLIFACGALIHGRKENQ 941
RIQ F IM EWMR*NQN*RVT SE LV QPIL S HLVLML FACGALIHGRKENQ
Sbjct: 181 RIQPFTSIMSEWMR*NQN*RVTTSE*LVWPSQPILTSLSHLVLMLNFACGALIHGRKENQ 360
Query: 942 FLYNYLWGRLLLVKLVYSSI 961
F YNYL LLV +SSI
Sbjct: 361 FHYNYLREGHLLVIHGFSSI 420
>AV410408
Length = 418
Score = 158 bits (399), Expect = 5e-39
Identities = 79/125 (63%), Positives = 97/125 (77%)
Frame = +2
Query: 556 FSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWD 615
FSCG++K+G+SFLVEWNESEGA+KRTY+G K+SAGVVQFDTT+NRFLAAG++ IKFWD
Sbjct: 5 FSCGSNKEGESFLVEWNESEGAVKRTYHGLGKRSAGVVQFDTTKNRFLAAGDEFMIKFWD 184
Query: 616 MDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAF 675
MDN N LTS +A+GG+ LLAV+T DNG KILAN G+R LRTVE+ F
Sbjct: 185 MDNTNLLTSADADGGI-------------LLAVSTNDNGVKILANPEGIRLLRTVESRTF 325
Query: 676 EALRS 680
+A R+
Sbjct: 326 DASRA 340
>BP039104
Length = 472
Score = 130 bits (327), Expect = 1e-30
Identities = 74/153 (48%), Positives = 92/153 (59%), Gaps = 1/153 (0%)
Frame = +1
Query: 155 PLFRDKLVFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPT 214
P F + L+ ++ TLINQSLNWQHQLCKNPRPNPDIKTLF+DHSC NG AP+
Sbjct: 25 PSFPRQASVSFLEELQIGTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPS 204
Query: 215 PVNLP-VAAVAKPAAYTSLGVGAHGPFPPAAATANANALAGWMANASVSSSVQAAVVTAS 273
PV P ++ V K + L AHGPF P A A +LAGWMAN S A+
Sbjct: 205 PVTNPLMSGVPKAGGFPPL--SAHGPFQPTPA-ALPTSLAGWMANPSPVPHPSASAGPIG 375
Query: 274 TIPVPHNQVSILKRPITPSTTPGMVEYQSADHE 306
+ +N S+LKRP TP T ++YQ+AD +
Sbjct: 376 -LASANNAASLLKRPRTPPTNNPAMDYQTADSD 471
Score = 45.1 bits (105), Expect = 6e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2
Query: 147 LKKLIEANPLFRDKLVFPTLKSSR 170
LKKLIEANPLFRDKL FP+LK+SR
Sbjct: 2 LKKLIEANPLFRDKLQFPSLKNSR 73
>TC14548
Length = 725
Score = 127 bits (318), Expect = 1e-29
Identities = 79/127 (62%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Frame = +2
Query: 985 ALDSGFHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL 1044
A DSGF KMFCL YH+QLI TVS*++LHFAM TL F ML *D DV H Q+ L
Sbjct: 5 AFDSGFPKMFCLPPYHVQLIPVTVS*YMLHFAMQTLEFSMLIV*DYDVVSHLQYACHLPL 184
Query: 1045 *AEAKLCILLLWQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQ-- 1102
* EA LCILL QLIH + T+L L *LMG K**+PLNQ+ SGD HLW E *MVGQ
Sbjct: 185 *VEAMLCILLWLQLIH*NLTSLQLV*LMGLSK**NPLNQKVSGDLFHLWTTEN*MVGQLL 364
Query: 1103 HHLQATT 1109
H QATT
Sbjct: 365 HLQQATT 385
>TC18051
Length = 537
Score = 124 bits (312), Expect = 6e-29
Identities = 77/120 (64%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Frame = +2
Query: 996 LLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*AEAKLCILLL 1055
LL YH+Q ILATVS*++LHFAM TLGF ML *D*DV LHH + L*AE +LCILL
Sbjct: 2 LLPYHVQFILATVS*YMLHFAMQTLGFSMLIP*D*DVELHHLYACHLLL*AETRLCILLW 181
Query: 1056 WQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQ--HHLQATTHPIR 1113
+LIH T+L L *LMG K**+ LNQ+ SGD +HLW ME *MVGQ H QATT PIR
Sbjct: 182 LRLIH*HLTSLLLG*LMGLSK**NLLNQKVSGDLLHLWTMEY*MVGQLLHLQQATTLPIR 361
>TC8657
Length = 610
Score = 66.6 bits (161), Expect = 2e-11
Identities = 52/112 (46%), Positives = 66/112 (58%)
Frame = +1
Query: 1001 MQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*AEAKLCILLLWQLIH 1060
+Q I AT +*F+L M L +LMLTA*D*DV H HT RL A++C LLL Q IH
Sbjct: 1 LQHIPATAN*FMLLSLMEILEYLMLTA*D*DVV*LHLHT-YIRLHQTAQMCTLLLSQHIH 177
Query: 1061 SSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQHHLQATTHPI 1112
+ NL LD MG + *S + +E G+ +L I MVGQ H Q+ T P+
Sbjct: 178 RNQINLQLDFQMGLSRL*SLQSLKEGGELRNLLI----MVGQPHPQSQTTPL 321
>BP042687
Length = 502
Score = 47.8 bits (112), Expect = 1e-05
Identities = 58/156 (37%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +1
Query: 920 FHLVLMLIFACGALIHGRKE--NQFLYNYLWGRLLLVKLVYSSIQTNSDYWYPMRLSWQY 977
+HL L L GAL+ GR + N + LL LV S I T YW MRL Y
Sbjct: 31 YHLELTLSCVFGALMDGRSKQVNSCKCKMDEHQHLLQTLVSSFI*TRHIYWLFMRLR*LY 210
Query: 978 MMPQRWNALDSG-FHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHH 1036
M Q WNA SG K+ ++ HM I ATV+ ++ M L FL D*DV
Sbjct: 211 MRHQSWNA*SSGSLGKL--VVQSHMLHIHATVNQYM*ALKMEVLVFLPPQRFD*DVEYIK 384
Query: 1037 QHTSQQRL*AEAKLCILLLWQLIHSSPTNLPLD*LM 1072
S + +A CILL I +P NL D LM
Sbjct: 385 LLIS---IPTQA*DCILL*LLHIPPNPINLH*DLLM 483
>TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1379
Score = 47.0 bits (110), Expect = 2e-05
Identities = 65/273 (23%), Positives = 113/273 (40%), Gaps = 4/273 (1%)
Frame = +3
Query: 350 VTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP 409
VT++ + +++ S + I LW L +K K + + L + V+D
Sbjct: 123 VTAIATPIDNSDMIVTASRDKSIILWHL-------TKEDKTYGVPRRRLTGHSHFVQDVV 281
Query: 410 SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLC 469
S ++L GS+ G L + A + H V +AF+ N+Q
Sbjct: 282 LSSDGQFALSGSWDGEL---RLWDLAAGTSARRFV------GHTKDVLSVAFSIDNRQ-- 428
Query: 470 VVTCGDDKLIKVWDLTGRRLFNFEGHEAPV--YSICPHHKENIQ-FIFSTAVDGKIKAWL 526
+V+ D+ IK+W+ G + + ++A S +Q I S + D +K W
Sbjct: 429 IVSASRDRTIKLWNTLGECKYTIQDNDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWN 608
Query: 527 YDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFR 586
N R + T+ S DG+ S G KDG ++ W+ +EG KR Y+
Sbjct: 609 LTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGG--KDG--VILLWDLAEG--KRLYSLDA 770
Query: 587 KKSAGVVQFDTTQNRF-LAAGEDSQIKFWDMDN 618
+ F + NR+ L A ++ IK WD+++
Sbjct: 771 GSIIHALCF--SPNRYWLCAATETSIKIWDLES 863
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/130 (26%), Positives = 62/130 (46%), Gaps = 18/130 (13%)
Frame = +3
Query: 446 RVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLT-GRRLFNFEGHEAPVYSICP 504
R + H G VN +A + P+ LC + G D +I +WDL G+RL++ + ++++C
Sbjct: 627 RNTLAGHSGYVNTVAVS-PDGSLCA-SGGKDGVILLWDLAEGKRLYSLDAGSI-IHALCF 797
Query: 505 HHKENIQFIFSTAVDGKIKAW----------LYDNMGSRVDYDAPGH-------WCTTML 547
++ A + IK W L ++ + D G+ +CT++
Sbjct: 798 SPN---RYWLCAATETSIKIWDLESKSIVEDLKVDLKTEADATTGGNTNKKKVIYCTSLN 968
Query: 548 YSADGTRLFS 557
+SADG+ LFS
Sbjct: 969 WSADGSTLFS 998
>AV775170
Length = 502
Score = 45.4 bits (106), Expect = 5e-05
Identities = 21/41 (51%), Positives = 30/41 (72%)
Frame = +3
Query: 637 LRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEA 677
L F +EG ++ V+T DNG K+LAN G++ LRTVE+ F+A
Sbjct: 378 LVFKEEGFMMVVSTNDNGVKVLANPEGIKLLRTVESRTFDA 500
>BP038344
Length = 525
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/117 (24%), Positives = 57/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 410 SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLC 469
+V+ V +S DG+ + A + I++ S L+ + H G++DLA++ + +C
Sbjct: 104 AVACVKFSNDGTLLASASLDKTLIIWS---SATLSLLHRLTGHSEGISDLAWSSDSHYIC 274
Query: 470 VVTCGDDKLIKVWDLTGRR-LFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAW 525
+ DD+ +++WD TG + GH V+ C + +I S + D ++ W
Sbjct: 275 --SASDDRTLRIWDATGGDCVKTLRGHTHAVF--CVNFNPQSNYIVSGSFDETVRVW 433
>AV423929
Length = 399
Score = 41.6 bits (96), Expect = 7e-04
Identities = 35/86 (40%), Positives = 44/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 704 LMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPC-LTAQILRARLFDFYIQ 762
LMELIL E+ ++ W I L + K IL V+ L C + L RLF F+
Sbjct: 150 LMELILWPEV*KSKEAWM---INLKLVN*QK*LILLIVEQLLCQIVLLTLLTRLFVFFTP 320
Query: 763 ILVLVFWHLGQMVFRSCGSGLGMIRI 788
I L FW L Q RSCG+G MI+I
Sbjct: 321 IPGLAFWLLVQKGSRSCGNGAVMIKI 398
>TC14937 similar to UP|Q9FN19 (Q9FN19) Genomic DNA, chromosome 5, TAC
clone:K8K14 (AT5g67320/K8K14_4), partial (19%)
Length = 1089
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 462 AHPNKQLCVVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDG 520
++PNK+L + + D +K+WD+ G+ +++ GH VYS+ N +++ S + D
Sbjct: 31 SNPNKKLVLASASFDSTVKLWDVEVGKLIYSLNGHRDGVYSVA--FSPNGEYLASGSPDK 204
Query: 521 KIKAW 525
I W
Sbjct: 205 SIHIW 219
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.333 0.143 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,559,645
Number of Sequences: 28460
Number of extensions: 338898
Number of successful extensions: 2885
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of query: 1115
length of database: 4,897,600
effective HSP length: 100
effective length of query: 1015
effective length of database: 2,051,600
effective search space: 2082374000
effective search space used: 2082374000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144513.3