BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.1 + phase: 0
(428 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16639 299 7e-82
AV408588 153 5e-38
BP042319 138 2e-34
TC17340 similar to UP|BAC83509 (BAC83509) Protein phosphatase 2C... 128 2e-30
AV412526 73 2e-28
AI967864 110 6e-25
TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete 100 4e-22
TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, pa... 92 1e-21
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 90 6e-19
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 82 2e-16
AV409493 78 2e-15
TC11813 similar to UP|Q8LJ68 (Q8LJ68) Protein phosphatase 2C-lik... 67 4e-12
AV424435 59 2e-09
TC10673 homologue to UP|Q8S8Z0 (Q8S8Z0) Protein phosphatase 2C, ... 58 3e-09
TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {... 50 7e-07
BP054371 49 2e-06
TC17915 similar to GB|AAM10415.1|20147411|AY093799 AT3g05640/F18... 48 4e-06
TC9697 similar to GB|AAM63159.1|21554078|AY085949 protein phosph... 47 8e-06
TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-lik... 47 8e-06
CN825589 46 1e-05
>TC16639
Length = 848
Score = 299 bits (765), Expect = 7e-82
Identities = 147/182 (80%), Positives = 162/182 (88%)
Frame = +3
Query: 239 SAGGRLIIASDGIWDTLSNDIAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDII 298
+AGGRLIIASDGIWD LS+D+AA SCRG+PAELAAKLVVKEALR+RGLKDDTTCLVVDII
Sbjct: 3 NAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRTRGLKDDTTCLVVDII 182
Query: 299 PSDHPVLLPTPKKKHNMLTTLFFGKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLG 358
PSDHPVL PTP+KK NMLT+L FGKKS+NSTNK T+KLSAVG+VEELFEEGSAML ERLG
Sbjct: 183 PSDHPVLPPTPRKKPNMLTSLLFGKKSQNSTNKGTNKLSAVGIVEELFEEGSAMLTERLG 362
Query: 359 KDFPFDKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRNKKDAMEG 418
KD P + NS I RCA+CQ DQ P +GLSVNS P F+P SKP EGPFLCTNC+ KKDAMEG
Sbjct: 363 KDAPSNVNSGISRCAVCQADQIPSDGLSVNSEPIFTPVSKPLEGPFLCTNCQKKKDAMEG 542
Query: 419 KR 420
KR
Sbjct: 543 KR 548
>AV408588
Length = 431
Score = 153 bits (387), Expect = 5e-38
Identities = 75/85 (88%), Positives = 81/85 (95%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 MSKRELS--RMKPSPVPLATLIGREIRNEKVEKPFVKFGQAGLAKKGEDYFLIKTDCHRV 58
M+K ELS RMKP PVPLATLIGRE+R+EKVEKPFVK+GQAGLAKKGEDYFLI+TDCHRV
Sbjct: 172 MNKSELSSTRMKPPPVPLATLIGRELRHEKVEKPFVKYGQAGLAKKGEDYFLIRTDCHRV 351
Query: 59 PGDPSTAFSVFAIFDGHNGISAAIY 83
PGDPSTAFSVFAIFDGHNGISAAI+
Sbjct: 352 PGDPSTAFSVFAIFDGHNGISAAIF 426
>BP042319
Length = 268
Score = 138 bits (347), Expect(2) = 2e-34
Identities = 68/77 (88%), Positives = 71/77 (91%)
Frame = +3
Query: 111 RALVVGFVKTDTEFQKKGETSGTTATFVIVDGWTVTVASVGDSRCILDTQGGVVSLLTVD 170
RALV GFVKTD EFQ +GETSGTTATFVIVD WTVTVASVGDSRCILDTQGG V+ LTVD
Sbjct: 3 RALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVD 182
Query: 171 HRLEENVEERERVTASG 187
HRLEEN+EERERVTASG
Sbjct: 183 HRLEENIEERERVTASG 233
Score = 24.6 bits (52), Expect(2) = 2e-34
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 187 GGEVGRLNIFGG 198
GGEVGRL+I GG
Sbjct: 232 GGEVGRLSIVGG 267
>TC17340 similar to UP|BAC83509 (BAC83509) Protein phosphatase 2C-like,
partial (8%)
Length = 749
Score = 128 bits (322), Expect = 2e-30
Identities = 57/63 (90%), Positives = 60/63 (94%)
Frame = +1
Query: 366 NSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRNKKDAMEGKRPSRPT 425
NS I RCA+CQVDQPPG+GLSVNSGPFFSPAS+PWEGPFLCTNCR KKDAMEGKRPSRPT
Sbjct: 4 NSGIVRCAVCQVDQPPGDGLSVNSGPFFSPASQPWEGPFLCTNCRKKKDAMEGKRPSRPT 183
Query: 426 VTA 428
VTA
Sbjct: 184 VTA 192
>AV412526
Length = 325
Score = 72.8 bits (177), Expect(2) = 2e-28
Identities = 35/41 (85%), Positives = 39/41 (94%)
Frame = +1
Query: 238 SSAGGRLIIASDGIWDTLSNDIAAMSCRGLPAELAAKLVVK 278
S+AGGRLIIASDGIWD LS+D+AA SCRG+PAELAAKLVVK
Sbjct: 1 SNAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVK 123
Score = 69.7 bits (169), Expect(2) = 2e-28
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +2
Query: 278 KEALRSRGLKDDTTCLVVDIIPSDHPVLLPTPKKKHN 314
+EALR+RGLKDDTTCLVVDIIPSDHPVL PTP+KK N
Sbjct: 215 QEALRTRGLKDDTTCLVVDIIPSDHPVLPPTPRKKPN 325
>AI967864
Length = 405
Score = 110 bits (274), Expect = 6e-25
Identities = 50/78 (64%), Positives = 67/78 (85%)
Frame = +3
Query: 14 VPLATLIGREIRNEKVEKPFVKFGQAGLAKKGEDYFLIKTDCHRVPGDPSTAFSVFAIFD 73
VPLA+L+ RE+++EK+EKP ++FG A +KKGEDYFLIKTDC RVPG+ S++FSVFAIFD
Sbjct: 168 VPLASLLKREMKSEKMEKPTLRFGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFD 347
Query: 74 GHNGISAAIYTKENLLNN 91
GHNG +AAIY +E ++ +
Sbjct: 348 GHNGYAAAIYYQEPIVQS 401
>TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete
Length = 1338
Score = 100 bits (250), Expect = 4e-22
Identities = 89/303 (29%), Positives = 141/303 (46%), Gaps = 21/303 (6%)
Frame = +1
Query: 14 VPLATLIGREIRNEKVEK------PFVKFGQAGLAKK-GEDYFLIKTDCHRVPGDPSTA- 65
+ + + GREI ++ EK P G++ ++K Y L+K D A
Sbjct: 208 IQVQAMTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGYHLVKGRSDHAMEDYVVAQ 387
Query: 66 --------FSVFAIFDGHNGISAAIYTKENLLNNVLSAIPQDISRDAWLQALPRALVVGF 117
+FAIFDGH+G + Y + NL +N+L D W + + A+ +
Sbjct: 388 FKTVDNNELGLFAIFDGHSGHNVPDYLQSNLFDNILK------EPDFWTKPV-EAVKKAY 546
Query: 118 VKTDTEFQKK----GETSGTTATFVIVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRL 173
V TD+ +K G T T ++++ + VA++GDSR +L G + L +VDH
Sbjct: 547 VDTDSTILEKSGELGRGGSTAVTAILINCQKLVVANLGDSRAVLCKNGEAIPL-SVDH-- 717
Query: 174 EENVEERERVTASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVK 233
E E E + GG F N G + G L +SR+ GD + +++ PHV
Sbjct: 718 -EPATESEDIRNRGG-------FVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPHVT 873
Query: 234 QVKLSSAGGRLIIASDGIWDTLSNDIAAMSCRGL-PAELAAKLVVKEALRSRGLKDDTTC 292
+ +I+ASDG+W +SN A + R + A AAK + +EAL+ R DD +C
Sbjct: 874 VELIDDDAEFIILASDGLWKVMSNQEAVDAIRNVKDARSAAKNLTEEALK-RNSSDDISC 1050
Query: 293 LVV 295
+VV
Sbjct: 1051VVV 1059
>TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, partial (63%)
Length = 1000
Score = 92.4 bits (228), Expect(2) = 1e-21
Identities = 67/220 (30%), Positives = 108/220 (48%), Gaps = 6/220 (2%)
Frame = +3
Query: 84 TKENLLNNVLSAIPQDISRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTATFVIVDGW 143
T +N+L+ V+ D+ A+ G++ TD++F K+ G+ ++
Sbjct: 108 T*KNVLDEVIKRDDADVEE---------AVKRGYLNTDSDFLKEDLHGGSCCVTALIRNG 260
Query: 144 TVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIFGGNEVGP 203
+ V++ GD R ++ ++GGV LT DHR +ERER+ GG V G
Sbjct: 261 NLVVSNAGDCRAVI-SRGGVAEALTTDHRPSRE-DERERIETLGGYVDLCR-------GV 413
Query: 204 LRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSN----DI 259
R G L +SRSIGD + +++ P K +K+ LI+ASDG+WD +SN D+
Sbjct: 414 WRI-QGSLAVSRSIGDRHLKQWVTAEPETKVIKIEPEHDLLILASDGLWDKVSNQEAVDL 590
Query: 260 AAMSCRG--LPAELAAKLVVKEALRSRGLKDDTTCLVVDI 297
A C G P L A + + SRG DDT+ +++ +
Sbjct: 591 ARPLCVGNNKPQSLLACKKLVDLACSRGSMDDTSVMLIKL 710
Score = 27.3 bits (59), Expect(2) = 1e-21
Identities = 13/29 (44%), Positives = 16/29 (54%)
Frame = +2
Query: 60 GDPSTAFSVFAIFDGHNGISAAIYTKENL 88
G+ AF F +FDGH G AA + NL
Sbjct: 32 GENKLAF--FGVFDGHGGAKAAEFAANNL 112
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 90.1 bits (222), Expect = 6e-19
Identities = 84/295 (28%), Positives = 129/295 (43%), Gaps = 19/295 (6%)
Frame = +3
Query: 22 REIRNEKVEKPFVKFGQAGLAKKGEDYFLIKTDCHRVPGDPSTAFSVFAIFDGHNGISAA 81
RE + + P+ G K+ ED ++T C T FA+FDGH G A
Sbjct: 363 RERKRDDGVLPYGSVSVVGSRKEMEDAVSVETGC-------VTKCDYFAVFDGHGGAQVA 521
Query: 82 IYTKENLLNNVLSAIPQ---DISRDAWLQALPRALVVGFVKTDTEFQKKG--ETSGTTAT 136
+E L V + + + W + + F D E T G+TA
Sbjct: 522 EACRERLYRLVAEEVERCGNGVEEVDWEEVMEGC----FRNMDGEVAGNAALRTVGSTAV 689
Query: 137 FVIVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIF 196
+V V +A+ GD R +L G V L + DH+ + +E R+ +GG+V N
Sbjct: 690 VAVVAAAEVVIANCGDCRAVLGRGGEAVDLSS-DHK-PDRPDELMRIEEAGGKVINWN-- 857
Query: 197 GGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLS 256
G V G L SRSIGD + Y++ P V K SS LI+ASDG+WD +S
Sbjct: 858 -GQRV------LGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILASDGLWDVIS 1016
Query: 257 NDIAAMSCRGL--------------PAELAAKLVVKEALRSRGLKDDTTCLVVDI 297
+++A R A AA L+ + AL ++G +D+T+ +V+++
Sbjct: 1017SEMACQVVRKCLNGQIRRICNENQSRASEAATLLAEIAL-AKGSRDNTSVIVIEL 1178
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 81.6 bits (200), Expect = 2e-16
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Frame = +3
Query: 69 FAIFDGHNGISAAIYTKENLLNNVLSAI--PQDISRD-AWLQALPRALVVGFVKTDTEFQ 125
+ +FDGH G AA Y ++N++ + PQ D +LQ + +L F+ D+
Sbjct: 615 YGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVDKVFLQEVENSLRKAFLLADSALA 794
Query: 126 KK---GETSGTTATFVIVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERER 182
+SGTTA + G + VA+ GD R +L +G + + + DHR ER R
Sbjct: 795 DDCSVNTSSGTTALTAFIFGRLLMVANAGDCRAVLSRKGEAIDM-SEDHR-PIYPSERRR 968
Query: 183 VTASGG--EVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVG------EYIVPIPHVKQ 234
V GG E G LN G L ++R++GD D+ ++ P +Q
Sbjct: 969 VEDLGGYIEDGYLN--------------GVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQ 1106
Query: 235 VKLSSAGGRLIIASDGIWDTLSNDIAAMSCR-GL----PAELAAKLVVKEALRSRGLKDD 289
+ L+ LII DGIWD +S+ A R GL E A+ +V EALR D+
Sbjct: 1107MVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPERCARDLVMEALRLNTF-DN 1283
Query: 290 TTCLVVDIIPSDHPVLLPTPKKK 312
T ++V DH P+P ++
Sbjct: 1284LTVIIVCFSSLDHRESEPSPPQR 1352
>AV409493
Length = 426
Score = 78.2 bits (191), Expect = 2e-15
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = +3
Query: 1 MSKRELSRMKPSPVPLATLIGREIRNEKVEKPFVKFGQAGLAKKGEDYFLIKTDCHRVPG 60
MS + VPL+ L+ RE+ +E++EKP + GQAG +KKGED+ L+K +C R+ G
Sbjct: 198 MSTTTRNEQHHQTVPLSVLLKRELASERIEKPEIVHGQAGQSKKGEDFTLLKAECQRMVG 377
Query: 61 DPSTAFSVFAIFDGHN 76
D + +SVF +FDGHN
Sbjct: 378 DGVSTYSVFGLFDGHN 425
>TC11813 similar to UP|Q8LJ68 (Q8LJ68) Protein phosphatase 2C-like protein,
partial (36%)
Length = 917
Score = 67.4 bits (163), Expect = 4e-12
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Frame = +1
Query: 145 VTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIFGGNEVGPL 204
+ V++ GDSR +L +G L+VDH+ +E R+ A+GG+V + N G+ V
Sbjct: 34 IIVSNCGDSRAVL-CRGKEPLALSVDHKPNRE-DEYARIEAAGGKVIQWN---GHRVF-- 192
Query: 205 RCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDIAAMSC 264
G L +SRSIGD + +I+P P V+ + + LI+ASDG+WD ++N+ A
Sbjct: 193 ----GVLAMSRSIGDRYLKPWIIPEPEVRFLPRAKEDECLILASDGLWDVMTNEEACDLA 360
Query: 265 RGL---------------------PAELAAKLVVKEALRSRGLKDDTTCLVVDIIP 299
R PA AA + +G KD+ T +VVD+ P
Sbjct: 361 RKRILLWYKKNGFELSSERGEGVDPAAQAAAEFLSNRALPKGSKDNITVIVVDLKP 528
>AV424435
Length = 280
Score = 58.5 bits (140), Expect = 2e-09
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +1
Query: 67 SVFAIFDGHNGISAAIYTKENLLNNVLSAIPQDISRDA-WLQALPRALVVGFVKTDTEFQ 125
S + +FDGH G SAA + +++L P+ I DA + L + + F++TD EF
Sbjct: 4 SFYGVFDGHGGKSAAQFVRDHL--------PRVIVEDADFPLELEKVVTKSFLETDAEFA 159
Query: 126 K--KGETSGTTATFVIVDGWTVTVASVGDSRCILDTQGGV 163
K E+SGTTA I+ G ++ VA+ GD R +L G V
Sbjct: 160 KTCSSESSGTTALTAIILGRSLLVANAGDCRAVLSRSGAV 279
>TC10673 homologue to UP|Q8S8Z0 (Q8S8Z0) Protein phosphatase 2C, partial
(48%)
Length = 669
Score = 57.8 bits (138), Expect = 3e-09
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +3
Query: 57 RVPGDPSTAFSVFAIFDGHNGISAAIYTKENLLNNVLSAIPQDISRDAWLQALPRALVVG 116
R+ G +F +FDGH G AA Y K+NL +N+ IS ++ A+
Sbjct: 369 RIDGVEGEVVGLFGVFDGHGGARAAEYVKQNLFSNL-------ISHPKFISDTKSAIADA 527
Query: 117 FVKTDTEFQK----KGETSGTTATFVIVDGWTVTVASVGDSRCIL 157
+ TD+EF K + +G+TA+ I+ G + VA+VGDS+ ++
Sbjct: 528 YNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSKAVI 662
>TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {Arabidopsis
thaliana;}, partial (46%)
Length = 996
Score = 50.1 bits (118), Expect = 7e-07
Identities = 46/140 (32%), Positives = 64/140 (44%), Gaps = 11/140 (7%)
Frame = +3
Query: 167 LTVDHRLEENVEERERVTASGGEVGRLNIFGGNEVGPLRCW-----PGGLCLSRSIGDTD 221
LTVD + + E ER+ G V L +E R W GL ++R+ GD
Sbjct: 30 LTVDLK-PDLPREAERIKRCKGRVFALQ----DEPEVPRVWLPFDDAPGLAMARAFGDFC 194
Query: 222 VGEY-IVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDIAAMSCRGLPAEL-AAKLVVKE 279
+ EY ++ IP +L+ ++IASDG+WD LSN+ P AA+ VV
Sbjct: 195 LKEYGVISIPEFSHRQLTDRDQFIVIASDGVWDVLSNEEVVEIVSSSPTRASAARTVVNS 374
Query: 280 ALRSRGLKDDTT----CLVV 295
A R LK T+ C VV
Sbjct: 375 AAREWKLKYPTSRMDDCAVV 434
>BP054371
Length = 567
Score = 48.9 bits (115), Expect = 2e-06
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = -2
Query: 209 GGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDIAAMSCRGL- 267
G L +SR+ GD ++ ++ P ++ ++ S LI+ASDG+W ++N A + +
Sbjct: 554 GQLAVSRAFGDQNLKSHLRSDPDIRHDEIDSDTEFLILASDGLWKVMANPEAVDIAKKIQ 375
Query: 268 PAELAAKLVVKEALRSRGLKDDTTCLVV 295
AAK + EAL +R KDD +CLVV
Sbjct: 374 DPPKAAKPLTAEAL-NRESKDDISCLVV 294
>TC17915 similar to GB|AAM10415.1|20147411|AY093799 AT3g05640/F18C1_9
{Arabidopsis thaliana;}, partial (37%)
Length = 506
Score = 47.8 bits (112), Expect = 4e-06
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 174 EENVEERERVTASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVGEY-IVPIPHV 232
E +E + RV E G + +E P GL +SR+ GD V EY ++ +P V
Sbjct: 2 ERILEHQGRVFCLDDEPGVHRVCLPDEESP------GLAMSRAFGDYCVKEYGLISVPEV 163
Query: 233 KQVKLSSAGGRLIIASDGIWDTLSNDIAAMSCRGLPAEL-AAKLVVKEALRS 283
Q ++S +++A+DG+WD +SN+ A +AK +VK A+R+
Sbjct: 164 TQRNITSKDQFVVLATDGVWDVISNEEAVDIVSSTADRTDSAKRLVKCAMRA 319
>TC9697 similar to GB|AAM63159.1|21554078|AY085949 protein phosphatase-2C
{Arabidopsis thaliana;}, partial (33%)
Length = 833
Score = 46.6 bits (109), Expect = 8e-06
Identities = 51/179 (28%), Positives = 81/179 (44%), Gaps = 14/179 (7%)
Frame = +2
Query: 170 DHRLEENVEERERVTASGGEV--GRLNIFGGNEVGPLRCWPGGLCLSRSIGDTD------ 221
DHR + ER RV GG + G LN G L ++R++GD D
Sbjct: 23 DHR-PSYLPERRRVEELGGFIDDGYLN--------------GYLSVTRALGDWDFKLPIG 157
Query: 222 VGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDIAAMSC--RGL----PAELAAKL 275
++ P V+ + L+ LII DGIWD +S+ ++ +S RGL + A+
Sbjct: 158 AASPLIAEPDVQLITLTEDDEFLIIGCDGIWDVMSSQVSPVSLVRRGLRRHDDPQQCARE 337
Query: 276 VVKEALRSRGLKDDTTCLVVDIIPSDHPVLLPTPKKKHNMLTTLFFGKKSENSTNKATS 334
+VKEALR D+ T +V+ + + V P+++ +L SE + N+ S
Sbjct: 338 LVKEALR-LNTSDNLTVIVICLSSIESTVESCPPQRRRFKACSL-----SEEARNRLKS 496
>TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (57%)
Length = 932
Score = 46.6 bits (109), Expect = 8e-06
Identities = 55/186 (29%), Positives = 86/186 (45%), Gaps = 28/186 (15%)
Frame = +1
Query: 130 TSGTTATFVIVDGWTVTVASVGDSRCILDTQ----GGVVSL-LTVDHR--LEENVEERER 182
T GT ++ T+ VA++GDSRC+L + GGV ++ L+ +H LE+ +E +
Sbjct: 4 TRGTCCLVGVIFQQTLFVANLGDSRCVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKE 183
Query: 183 VTASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVG------EYIVP---IPHVK 233
+ ++ L + G R G + +SRSIGD+ + E I P +P
Sbjct: 184 LHPDDPQIVVL------KHGVWRV-KGIIQVSRSIGDSYMKHAQFNREPINPKFRLPEPM 342
Query: 234 QVKLSSAGGR------------LIIASDGIWDTLSNDIAAMSCRGLPAELAAKLVVKEAL 281
+ + SA LI ASDG+W+ LSN+ A P +AK +VK AL
Sbjct: 343 NMPIMSANPTILSHPLQPSDSFLIFASDGLWEHLSNEQAVDIVHSNPRAGSAKRLVKAAL 522
Query: 282 RSRGLK 287
+ K
Sbjct: 523 QEAARK 540
>CN825589
Length = 544
Score = 45.8 bits (107), Expect = 1e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 209 GGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDTLSNDIA 260
G L +SR+IGD + Y++ P V + LI+ASDG+WD +SND A
Sbjct: 51 GVLAMSRAIGDNYLKPYVISEPEVTVTDRTDEDECLILASDGLWDVVSNDTA 206
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,244,766
Number of Sequences: 28460
Number of extensions: 99129
Number of successful extensions: 439
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of query: 428
length of database: 4,897,600
effective HSP length: 93
effective length of query: 335
effective length of database: 2,250,820
effective search space: 754024700
effective search space used: 754024700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Medicago: description of AC144513.1