TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144503.8 - phase: 0 
         (729 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AV769843                                                               47  8e-06
AV771938                                                               31  0.80
TC16944 similar to UP|Q94KL4 (Q94KL4) BEL1-like homeodomain 1, p...    31  0.80
AV780961                                                               29  2.3
TC17962 UP|Q98GB0 (Q98GB0) Glucokinase, partial (29%)                  28  4.0
TC9623 homologue to UP|Q8H1K8 (Q8H1K8) Stromal ascorbate peroxid...    27  8.9

>AV769843 
          Length = 365

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -1

Query: 702 INGERELSSPTASVSAQSISSVRSHNSS 729
           INGER+  SPTASVSAQSISSVRSH+SS
Sbjct: 365 INGERDPHSPTASVSAQSISSVRSHSSS 282


>AV771938 
          Length = 582

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 20/65 (30%), Positives = 31/65 (46%)
 Frame = +2

Query: 67  DSEHKEISDLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLLS 126
           DS+ KE S L  WL E  + LDV+    +++   A + EG+   ++          LLLS
Sbjct: 260 DSKEKEASPLAAWLKEMKEGLDVV--RHKIQSLTAKVKEGQYPTADGFSYLEAKNLLLLS 433

Query: 127 LQSSI 131
              S+
Sbjct: 434 YCQSL 448


>TC16944 similar to UP|Q94KL4 (Q94KL4) BEL1-like homeodomain 1, partial (29%)
          Length = 1198

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/66 (25%), Positives = 28/66 (41%)
 Frame = -2

Query: 311  IQESTAAMAAADDWVLTYPPNVNRQTGSTTAFQLKLTSSAHRFNLMVQDFFEDVGPLLSM 370
            +  S++ M    DW LT+PP  +     T    +    +   F L + D   D GPL  +
Sbjct: 1107 VSPSSSCMKLNADWFLTFPPTGDVDGVDTETIGVFWFLATSWFELKLLDSVSDAGPLSCI 928

Query: 371  QLGGQA 376
             + G +
Sbjct: 927  FIAGDS 910


>AV780961 
          Length = 543

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/36 (38%), Positives = 22/36 (60%)
 Frame = -3

Query: 522 EWIPSLIFQSVVSWLLIFKNYRIRQQIDDLSIHIFL 557
           E+ PS+ F S  SW  IFKN+ +  ++D++    FL
Sbjct: 136 EYAPSICFFS--SWQAIFKNWCLASRLDEMVYECFL 35


>TC17962 UP|Q98GB0 (Q98GB0) Glucokinase, partial (29%)
          Length = 435

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/32 (46%), Positives = 17/32 (52%), Gaps = 2/32 (6%)
 Frame = +1

Query: 453 KDDNRRRTTERQNRHPEQR--EWRRRLVGSVD 482
           +D  RRR    Q+RH   R   WRRR  GS D
Sbjct: 94  RDGARRRARPWQHRHVHHRYRHWRRRRPGSAD 189


>TC9623 homologue to UP|Q8H1K8 (Q8H1K8) Stromal ascorbate peroxidase,
           partial (42%)
          Length = 640

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/46 (32%), Positives = 25/46 (53%)
 Frame = -1

Query: 397 ESMEEEESFEDSGNKIVRMAETEAQQIALLANASLLADELLPRAAM 442
           E  EEEE  E+   +     E E++++AL+A   ++     PRAA+
Sbjct: 190 EREEEEEEEENEKKEREEYEEEESERVALVAVEGIMRAAAPPRAAI 53


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,868,772
Number of Sequences: 28460
Number of extensions: 135831
Number of successful extensions: 745
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of query: 729
length of database: 4,897,600
effective HSP length: 97
effective length of query: 632
effective length of database: 2,136,980
effective search space: 1350571360
effective search space used: 1350571360
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)