BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144503.4 - phase: 0
(366 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV406482 143 5e-35
TC17648 similar to UP|Q9AYN9 (Q9AYN9) NQK1 MAPKK, partial (51%) 138 2e-33
TC8585 weakly similar to PIR|T51339|T51339 mitogen-activated pro... 120 4e-28
TC17375 mitogen-activated kinase kinase kinase alpha [Lotus corn... 115 1e-26
TC14287 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein k... 111 2e-25
TC18815 similar to UP|Q8W1D5 (Q8W1D5) CBL-interacting protein ki... 108 1e-24
TC12444 similar to UP|O22981 (O22981) Ser/Thr protein kinase iso... 97 6e-21
TC9382 weakly similar to UP|ABL_DROME (P00522) Tyrosine-protein ... 95 2e-20
TC8079 homologue to UP|Q9M6S1 (Q9M6S1) MAP kinase 3, complete 91 2e-19
AV768139 91 2e-19
TC8907 similar to UP|Q8H0X3 (Q8H0X3) Serine/threonine protein ki... 91 3e-19
TC14602 UP|Q8GS56 (Q8GS56) Phosphoenolpyruvate carboxylase kinas... 87 6e-18
CN825555 84 4e-17
TC8547 homologue to UP|MMK1_MEDSA (Q07176) Mitogen-activated pro... 84 5e-17
TC11528 homologue to UP|Q39868 (Q39868) Protein kinase , partial... 82 1e-16
TC8971 similar to GB|AAM16251.1|20334780|AY093990 At2g11520/F14P... 81 2e-16
TC15973 homologue to GB|AAL15278.1|16323087|AY057647 AT3g01490/F... 80 5e-16
TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodula... 78 2e-15
TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete 78 3e-15
TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich ... 74 3e-14
>AV406482
Length = 203
Score = 143 bits (360), Expect = 5e-35
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = +3
Query: 232 PCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWAS 291
PCNSSVGTIAYMSPER+NTDINDGQYDAYAGDIWS GVSILEFYMGRFPFAVGRQGDWAS
Sbjct: 3 PCNSSVGTIAYMSPERMNTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWAS 182
Query: 292 LMCAICM 298
LMCAICM
Sbjct: 183 LMCAICM 203
>TC17648 similar to UP|Q9AYN9 (Q9AYN9) NQK1 MAPKK, partial (51%)
Length = 741
Score = 138 bits (347), Expect = 2e-33
Identities = 78/160 (48%), Positives = 101/160 (62%), Gaps = 6/160 (3%)
Frame = +3
Query: 186 LRGLAYLHR-RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMS 244
L+GL YLH RH++HRD KPS+LL+N + +VKI DFGV +L +M ++ VGT YMS
Sbjct: 3 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 182
Query: 245 PERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGR-QGDWAS---LMCAICMSQ 300
P RI+ D Y+ DIWSLG+ +LE +GRFP+ Q W S L+ AI S
Sbjct: 183 PARISGSTYD-----YSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESP 347
Query: 301 PPEAPTTA-SPEFRDFVSRCLQRDPSRRWTASRLLSHPFL 339
PP AP+ SPEF FVS C+Q+DP R T+ LL HPF+
Sbjct: 348 PPSAPSDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFI 467
>TC8585 weakly similar to PIR|T51339|T51339 mitogen-activated protein
kinase kinase 4 [validated] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(24%)
Length = 549
Score = 120 bits (301), Expect = 4e-28
Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Frame = +2
Query: 244 SPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFA-VGRQGDWASLMCAICMSQPP 302
SPER + + + G Y+ +A DIWSLG+++ E Y+G FPF G++ DW +LMC IC PP
Sbjct: 2 SPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWVTLMCGICFGDPP 181
Query: 303 EAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRN 342
P TASPEFR FV CL+++ RWTA++LL+HPF+ ++
Sbjct: 182 SLPETASPEFRSFVECCLKKESGERWTAAQLLAHPFVCKD 301
>TC17375 mitogen-activated kinase kinase kinase alpha [Lotus corniculatus
var. japonicus]
Length = 1422
Score = 115 bits (288), Expect = 1e-26
Identities = 84/249 (33%), Positives = 131/249 (51%), Gaps = 12/249 (4%)
Frame = +3
Query: 125 RQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGS----LEGKHIPQENQLAD 180
+Q+++EI +L N+V+ + + V LEY+ GGS L+ +E + +
Sbjct: 66 KQLNQEINLLNQFSHPNIVQYYGSELGEESLSVYLEYVSGGSIHKLLQEYGAFKEPVIQN 245
Query: 181 VARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTI 240
RQI+ GLAYLH R+ VHRDIK +N+L++ ++K+ADFG+ + +N S G+
Sbjct: 246 YTRQIVSGLAYLHSRNTVHRDIKGANILVDPNGEIKLADFGMSKHINSAASML-SFKGSP 422
Query: 241 AYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQ 300
+M+PE + +N Y DI SLG +ILE + P++ Q + + + I S+
Sbjct: 423 YWMAPEVV---MNTNGY-GLPVDISSLGCTILEMATSKPPWS---QFEGVAAIFKIGNSK 581
Query: 301 P-PEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFL-------VRNGSNHNQSPPN 352
PE P S + ++F+ +CLQRDP R TA LL+HPF+ V N S + P
Sbjct: 582 DMPEIPEHLSDDAKNFIKQCLQRDPLARPTAQSLLNHPFIRDQSATKVANASITRDAFPY 761
Query: 353 MHQLLPPPP 361
M PP
Sbjct: 762 MSDGSRTPP 788
>TC14287 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(75%)
Length = 1999
Score = 111 bits (277), Expect = 2e-25
Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Frame = +3
Query: 40 LPQRDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGTVY 99
LP LA P P PP S + I F++ E +G G+ VY
Sbjct: 318 LPHLSP*LATPPPPPPPPPP------PSSSTMVPENPRNIIFNKYEMGRVLGQGNFAKVY 479
Query: 100 KVVHRINGRAYALKVIYGHHEESVR--RQIHREIQILRDVDDVNVVKCHEMYDHNAEIQV 157
+ A+KVI + R +QI RE+ ++R V ++V+ E+ +I +
Sbjct: 480 HGRNLATNENVAIKVIKKEKLKKDRLVKQIKREVSVMRLVRHPHIVELKEVMATKGKIFL 659
Query: 158 LLEYMDGGSL---EGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQ 214
++EY+ GG L K E+ +Q++ + + H R + HRD+KP NLL++ +
Sbjct: 660 VMEYVKGGELFTKVNKGKLNEDDARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENED 839
Query: 215 VKIADFGVGRILNQTMD------PCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLG 268
+K++DFG+ + Q D PC GT AY++PE + YD DIWS G
Sbjct: 840 LKVSDFGLSALPEQRRDDGMLVTPC----GTPAYVAPEVLKKK----GYDGSKADIWSCG 995
Query: 269 VSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRW 328
V + G PF QG+ + E P SP+ ++ +S L DP +R+
Sbjct: 996 VILYALLSGYLPF----QGENVMRIYRKAFKAEYEFPEWISPQAKNLISNLLVADPEKRY 1163
Query: 329 TASRLLSHPF 338
+ ++S P+
Sbjct: 1164SIPEIISDPW 1193
>TC18815 similar to UP|Q8W1D5 (Q8W1D5) CBL-interacting protein kinase
CIPK25, partial (58%)
Length = 979
Score = 108 bits (271), Expect = 1e-24
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Frame = +2
Query: 80 PFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHH--EESVRRQIHREIQILRDV 137
P + E +G G+ VY +G A+KV+ +E + QI REI I+R V
Sbjct: 26 PIGKYEMGRVLGKGTLAKVYFAKEITSGEGVAIKVMSKARIKKEGMMDQIKREISIMRLV 205
Query: 138 DDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVAR----QILRGLAYLH 193
N+V E+ +I ++EY+ GG L K + + D+AR Q++ + Y H
Sbjct: 206 RHPNIVNLKEVMATKTKIFFIMEYIRGGELFAK-VAKGKLKDDLARRYFQQLISAVDYCH 382
Query: 194 RRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDP--CNSSVGTIAYMSPERINTD 251
R + HRD+KP NLL++ + +K++DFG+ + Q ++ GT AY++PE +
Sbjct: 383 SRGVSHRDLKPENLLLDENENLKVSDFGLSGLPEQLRQDGLLHTQCGTPAYVAPEVLRKK 562
Query: 252 INDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPE 311
YD + D WS GV + G PF Q + M + + P SPE
Sbjct: 563 ----GYDGFKTDTWSCGVILYALLAGCLPF----QHENLMTMYNKVLRAEFQFPPWFSPE 718
Query: 312 FRDFVSRCLQRDPSRRWTASRLL 334
+ +S+ L DP+RR T S ++
Sbjct: 719 SKKLISKILVADPNRRITISSIM 787
>TC12444 similar to UP|O22981 (O22981) Ser/Thr protein kinase isolog,
partial (37%)
Length = 709
Score = 96.7 bits (239), Expect = 6e-21
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Frame = +2
Query: 68 SGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQI 127
S G ++ + + L +G G+ TVY+ V A+K + + I
Sbjct: 41 STMGSGTRTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLEDI 220
Query: 128 HREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGS---LEGKHIP---QENQLADV 181
RE Q + +D NVV+ H + + + V++ +M GS L P +E + +
Sbjct: 221 RREAQTMSLIDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGSI 400
Query: 182 ARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRIL---NQTMDPCNSSVG 238
++ L+ L YLHR +HRD+K N+L+ S QVK+ADFGV + + N+ VG
Sbjct: 401 LKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFVG 580
Query: 239 TIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFA 282
T +M+PE + G + D+WS G++ LE G PF+
Sbjct: 581 TPCWMAPE----VLQPGTGYNFKADVWSFGITALELAHGHAPFS 700
>TC9382 weakly similar to UP|ABL_DROME (P00522) Tyrosine-protein kinase Abl
(D-ash) , partial (5%)
Length = 1197
Score = 95.1 bits (235), Expect = 2e-20
Identities = 62/218 (28%), Positives = 109/218 (49%), Gaps = 8/218 (3%)
Frame = +2
Query: 125 RQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSL-----EGKHIPQENQLA 179
++ +E+ I+R + NVV+ + ++ E+M GSL + + + + L
Sbjct: 65 KEFAQEVYIMRKIRHKNVVQFIGACTRTPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLL 244
Query: 180 DVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGT 239
VA + +G+ YLH+ +I+HRD+K NLL++ + VK+ADFGV R++ Q+ + GT
Sbjct: 245 KVAIDVSKGMNYLHQNNIIHRDLKTGNLLMDENELVKVADFGVARVITQS-GVMTAETGT 421
Query: 240 IAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMS 299
+M+PE I YD A D++S G+++ E G P++ L A+ +
Sbjct: 422 YRWMAPE----VIEHKPYDQKA-DVFSFGIALWELLTGELPYSY-----LTPLQAAVGVV 571
Query: 300 QP---PEAPTTASPEFRDFVSRCLQRDPSRRWTASRLL 334
Q P P P + + RC ++DP R S ++
Sbjct: 572 QKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEII 685
>TC8079 homologue to UP|Q9M6S1 (Q9M6S1) MAP kinase 3, complete
Length = 1550
Score = 91.3 bits (225), Expect = 2e-19
Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 46/380 (12%)
Frame = +3
Query: 6 LPPPTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNG 65
LPPP+ST + + + NN +R LP + NL + +G
Sbjct: 63 LPPPSSTHQPSLTVTRERNNHFLERES----LLPTHSSERNLMAGV-----NPNGVAEFQ 215
Query: 66 SGSGSGGASQQLVIPFSELERLNR-------IGSGSGGTVYKVVHRINGRAYALKVI--- 115
+ GG Q I + E ++ IG G+ G V +++ A+K I
Sbjct: 216 AVPSHGGQFIQYNIFGNLFEVTSKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANA 395
Query: 116 YGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYD-----HNAEIQVLLEYMDGGS---L 167
+ +H ++ R REI++LR +D NV+ ++ ++ + E MD +
Sbjct: 396 FDNHMDAKRTL--REIKLLRHLDHENVIALRDVIPPPLRREFTDVYITTELMDTDLHQII 569
Query: 168 EGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILN 227
E Q+LRGL Y+H +I+HRD+KPSNLL+NS +KI DFG+ R
Sbjct: 570 RSNQGLSEEHCQYFLYQVLRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTV 749
Query: 228 QTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQG 287
+ D V T Y +PE + +N Y + A D+WS+G +E M + P G+
Sbjct: 750 EN-DFMTEYVVTRWYRAPELL---LNSSDYTS-AIDVWSVGCIFMEL-MNKKPLFPGKDH 911
Query: 288 DWASLMCAICMSQPPEA-----------------------PTT-----ASPEFRDFVSRC 319
+ + P EA P T P D V +
Sbjct: 912 VHQLRLLTELLGTPTEADLGLVKNDDVRRYIRQLPQYPRQPLTKVFPHVHPMAMDLVDKM 1091
Query: 320 LQRDPSRRWTASRLLSHPFL 339
L DP++R T + L+HP+L
Sbjct: 1092LTIDPTKRITVEQALAHPYL 1151
>AV768139
Length = 289
Score = 91.3 bits (225), Expect = 2e-19
Identities = 47/89 (52%), Positives = 55/89 (60%)
Frame = -1
Query: 278 RFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHP 337
RFPF+V RQG+WAS C ICM Q +AP S EFRDF+ RC QR SRR SRL +HP
Sbjct: 289 RFPFSVERQGEWASQCCGICMYQTQQAPPLVSMEFRDFIGRC*QRKHSRREQESRLHAHP 110
Query: 338 FLVRNGSNHNQSPPNMHQLLPPPPRSQSS 366
F+ + Q +LLPPPPR SS
Sbjct: 109 FVGQYSRPDTQHREIALRLLPPPPRCLSS 23
>TC8907 similar to UP|Q8H0X3 (Q8H0X3) Serine/threonine protein kinase-like
protein, partial (44%)
Length = 941
Score = 90.9 bits (224), Expect = 3e-19
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Frame = +3
Query: 79 IPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHH--EESVRRQIHREIQILRD 136
I F++ E +G G+ VY + + A+KVI +E + +QI RE+ ++R
Sbjct: 327 ILFNKYEIGKILGQGNFAKVYHGRNMETNESVAIKVIKKERLKKERLVKQIKREVSVMRL 506
Query: 137 VDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVA-----RQILRGLAY 191
V ++V+ E+ +I +++EY+ GG L K + ++ +VA +Q++ + +
Sbjct: 507 VRHPHIVELKEVMATKTKIFMVVEYVKGGELFAKLT--KGKMTEVAARKYFQQLISAVDF 680
Query: 192 LHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQ------TMDPCNSSVGTIAYMSP 245
H R + HRD+KP NLL++ + +K++DFG+ + Q + PC GT AY++P
Sbjct: 681 CHSRGVTHRDLKPENLLLDDNEDLKVSDFGLSSLPEQRRSDGMLLTPC----GTPAYVAP 848
Query: 246 ERINTDINDGQYDAYAGDIWSLGVSILEFYMGRF 279
E + YD DIWS GV + G F
Sbjct: 849 EVLKKK----GYDGSKADIWSCGVILYALLCGIF 938
>TC14602 UP|Q8GS56 (Q8GS56) Phosphoenolpyruvate carboxylase kinase, complete
Length = 1256
Score = 86.7 bits (213), Expect = 6e-18
Identities = 68/276 (24%), Positives = 125/276 (44%), Gaps = 10/276 (3%)
Frame = +2
Query: 82 SELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGH--HEESVRRQIHREIQILRDVDD 139
S+ + IG G GT+++ H I+ +A+K+I + + R + E + + +
Sbjct: 62 SQYQLCEEIGRGRFGTIFRCFHPISTDTFAVKLIDKSLLADSTDRHCLENEPKYMSLLSP 241
Query: 140 -VNVVKCHEMYDHNAEIQVLLEYMDGGSL-------EGKHIPQENQLADVARQILRGLAY 191
N+++ ++++ + + +++E +L G IP E + A + +Q+L +A+
Sbjct: 242 HPNILQIFDVFEDDDVLSMVIELCQPLTLLDRIVAANGTSIP-EVEAAGLMKQLLEAVAH 418
Query: 192 LHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTD 251
HR + HRD+KP N+L +K+ADFG + VGT Y++PE
Sbjct: 419 CHRLGVAHRDVKPDNVLFGGGGDLKLADFGSAEWFGDGR-RMSGVVGTPYYVAPE----- 580
Query: 252 INDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPE 311
+ G+ D+WS GV + G PF + + + P SP
Sbjct: 581 VLMGREYGEKVDVWSCGVILYIMLSGTPPFYGDSAAEIFEAVIRGNLRFPSRIFRNVSPA 760
Query: 312 FRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHN 347
+D + + + RDPS R +A + L HP+ + G N
Sbjct: 761 AKDLLRKMICRDPSNRISAEQALRHPWFLSAGDTVN 868
>CN825555
Length = 714
Score = 84.0 bits (206), Expect = 4e-17
Identities = 59/170 (34%), Positives = 89/170 (51%), Gaps = 8/170 (4%)
Frame = +1
Query: 85 ERLNRIGSGSGGTVYKVVHRINGRAYALKVI-YGHHEESVRRQIHREIQILRDVDDVNVV 143
E+L++IG G+ VYK + G+ ALK + + + E + + REI ILR +D NV+
Sbjct: 187 EKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVL 366
Query: 144 KCHEMYDH--NAEIQVLLEYMD---GGSLEGKHIP-QENQLADVARQILRGLAYLHRRHI 197
K + + + ++ EYM G I E+Q+ Q+ GL + H RH+
Sbjct: 367 KLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFTGLEHCHNRHV 546
Query: 198 VHRDIKPSNLLINSRKQVKIADFGVGRILN-QTMDPCNSSVGTIAYMSPE 246
+HRDIK SNLLI++ +KIADFG+ + P S V T+ Y PE
Sbjct: 547 LHRDIKGSNLLIDNEGVLKIADFGLASFFDPDHKHPMTSRVVTLWYRPPE 696
>TC8547 homologue to UP|MMK1_MEDSA (Q07176) Mitogen-activated protein
kinase homolog MMK1 (MAP kinase MSK7) (MAP kinase ERK1)
, partial (71%)
Length = 1098
Score = 83.6 bits (205), Expect = 5e-17
Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Frame = +1
Query: 184 QILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYM 243
QILRGL Y+H +++HRD+KPSNLL+N+ +KI DFG+ R+ ++T D V T Y
Sbjct: 160 QILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSET-DFMTEYVVTRWYR 336
Query: 244 SPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPE 303
+PE + +N Y A A D+WS+G +E M R P GR + + P E
Sbjct: 337 APELL---LNSSDYTA-AIDVWSVGCIFMEL-MDRKPLFPGRDHVHQLRLLMELIGTPSE 501
Query: 304 AP---------------------------TTASPEFRDFVSRCLQRDPSRRWTASRLLSH 336
PE D V + L DP +R T L+H
Sbjct: 502 DDLGFLNENAKRYIRQLPPYRRQSFQEKFPQVHPEAIDLVEKMLTFDPRKRITVEEALAH 681
Query: 337 PFL 339
P+L
Sbjct: 682 PYL 690
>TC11528 homologue to UP|Q39868 (Q39868) Protein kinase , partial (56%)
Length = 640
Score = 82.0 bits (201), Expect = 1e-16
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Frame = +3
Query: 85 ERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVK 144
E L +GSG+ G + G A+K I + + + REI R + N+++
Sbjct: 81 EPLKELGSGNFGVARLARDKNTGELVAVKYI--ERGKKIDENVQREIINHRSLRHPNIIR 254
Query: 145 CHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVAR----QILRGLAYLHRRHIVHR 200
E+ + ++LEY GG L + D AR Q++ G++Y H I HR
Sbjct: 255 FKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHR 434
Query: 201 DIKPSNLLI--NSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYD 258
D+K N L+ N ++KI DFG + P S+VGT AY++PE ++ +YD
Sbjct: 435 DLKLENTLLDGNPSPRLKICDFGYSKSAILHSQP-KSTVGTPAYIAPEVLSRK----EYD 599
Query: 259 AYAGDIWSLGVSI 271
D+WS GV++
Sbjct: 600 GKVADVWSCGVTL 638
>TC8971 similar to GB|AAM16251.1|20334780|AY093990 At2g11520/F14P14.15
{Arabidopsis thaliana;}, partial (37%)
Length = 1079
Score = 81.3 bits (199), Expect = 2e-16
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Frame = +3
Query: 130 EIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLE-------GKHIPQENQLADVA 182
E+++L +D N+VK D E ++ EY+ G+L GK I NQ ++A
Sbjct: 6 EVELLAKIDHRNLVKLLGFIDKGNERILITEYVPNGTLREHLDGLRGK-ILDFNQRLEIA 182
Query: 183 RQILRGLAYLH---RRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSV-- 237
+ GL YLH + I+HRD+K SN+L+ + K+ADFG R+ D + S
Sbjct: 183 IDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARLGPVNGDQTHISTKV 362
Query: 238 -GTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGD 288
GT+ Y+ PE + T D++S G+ +LE GR P + + D
Sbjct: 363 KGTVGYLDPEYMKT-----HQLTPKSDVYSFGILLLEILTGRRPVELKKAAD 503
>TC15973 homologue to GB|AAL15278.1|16323087|AY057647 AT3g01490/F4P13_4
{Arabidopsis thaliana;}, partial (49%)
Length = 944
Score = 80.1 bits (196), Expect = 5e-16
Identities = 45/147 (30%), Positives = 72/147 (48%)
Frame = +3
Query: 181 VARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTI 240
+A + RGL+YLH + IVHRD+K N+L++ + VKIADFGV R+ + GT+
Sbjct: 72 LALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTL 251
Query: 241 AYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQ 300
YM+PE +N + + + D Y S G+ + E Y P+ + S + +
Sbjct: 252 GYMAPEVLNGNPYNRKCDVY-----SFGICLWEIYCCDMPYPDLSFSEITS--AVVRQNL 410
Query: 301 PPEAPTTASPEFRDFVSRCLQRDPSRR 327
PE P + + +C P +R
Sbjct: 411 RPEIPRCCPSSLANVMKKCWDATPDKR 491
>TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodulation aberrant
root formation protein), complete
Length = 3308
Score = 78.2 bits (191), Expect = 2e-15
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Frame = +2
Query: 84 LERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVV 143
L+ N IG G G VY+ NG A+K + G EI+ L + N++
Sbjct: 2192 LKEENIIGKGGAGIVYRG-SMPNGTDVAIKRLVGQGSGRNDYGFRAEIETLGKIRHRNIM 2368
Query: 144 KCHEMYDHNAEIQVLLEYMDGGSL-------EGKHIPQENQLADVARQILRGLAYLHRRH 196
+ + +L EYM GSL +G H+ E + +A + RGL Y+H
Sbjct: 2369 RLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGGHLRWEMRYK-IAVEAARGLCYMHHDC 2545
Query: 197 ---IVHRDIKPSNLLINSRKQVKIADFGVGRILNQ--TMDPCNSSVGTIAYMSPERINTD 251
I+HRD+K +N+L+++ + +ADFG+ + L +S G+ Y++PE T
Sbjct: 2546 SPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTL 2725
Query: 252 INDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLM 293
D + D++S GV +LE +GR P VG GD ++
Sbjct: 2726 KVDEK-----SDVYSFGVVLLELIIGRKP--VGEFGDGVDIV 2830
>TC14769 UP|Q8LKX1 (Q8LKX1) Receptor-like kinase SYMRK, complete
Length = 3495
Score = 77.8 bits (190), Expect = 3e-15
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Frame = +3
Query: 90 IGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMY 149
IG G G+VY+ +G+ A+KV + R + E+ +L + N+V
Sbjct: 2181 IGEGGFGSVYRGTLN-DGQEVAVKVRSSTSTQGTR-EFDNELNLLSAIQHENLVPLLGYC 2354
Query: 150 DHNAEIQVLLEYMDGGSLEGKHI--PQENQLAD------VARQILRGLAYLHR---RHIV 198
+ + + ++ +M GSL+ + P + ++ D +A RGLAYLH R ++
Sbjct: 2355 NESDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVI 2534
Query: 199 HRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSV--GTIAYMSPERINTDINDGQ 256
HRDIK SN+L++ K+ADFG + Q D S GT Y+ PE T Q
Sbjct: 2535 HRDIKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKT-----Q 2699
Query: 257 YDAYAGDIWSLGVSILEFYMGRFPFAVGR-QGDWA 290
+ D++S GV +LE GR P + R + +W+
Sbjct: 2700 QLSEKSDVFSFGVVLLEIVSGREPLNIKRPRTEWS 2804
>TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich RNA binding
protein 7 {Arabidopsis thaliana;} , partial (19%)
Length = 483
Score = 74.3 bits (181), Expect = 3e-14
Identities = 48/142 (33%), Positives = 80/142 (55%), Gaps = 2/142 (1%)
Frame = +1
Query: 29 QRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLN 88
+ RR+ +L LP D LPL P+ + + +G A ++P ++E+L
Sbjct: 55 RHRRQPNLRLP-ELSDHRPRFTLPLAPTTTFKSSSATTSTTAGDA----IVP-GDIEKLA 216
Query: 89 RIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDV-NVVKCHE 147
+G+G+GGTVYKV H+ YALKV++ + + RR+ EI ILR D +VV+ H
Sbjct: 217 VLGNGNGGTVYKVHHKPTSTIYALKVVHTGSDPTTRRRTFAEINILRRASDCPHVVRYHG 396
Query: 148 MYDH-NAEIQVLLEYMDGGSLE 168
++ + ++ +L+EYM+ G+LE
Sbjct: 397 SFEKPSGDVAILMEYMESGTLE 462
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,367,039
Number of Sequences: 28460
Number of extensions: 127509
Number of successful extensions: 2277
Number of sequences better than 10.0: 332
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of query: 366
length of database: 4,897,600
effective HSP length: 92
effective length of query: 274
effective length of database: 2,279,280
effective search space: 624522720
effective search space used: 624522720
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC144503.4