BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144478.12 + phase: 0 /pseudo
(1250 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV776921 181 6e-46
BI417718 174 1e-43
TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 171 5e-43
BG662257 157 1e-38
BP055390 131 8e-31
TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 125 5e-29
AV411197 122 3e-28
BG662269 84 8e-28
BP042979 110 1e-24
BP039737 100 1e-21
AV418183 99 4e-21
CB829290 82 5e-16
AV413975 78 1e-14
AV768362 73 3e-13
TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance prote... 70 3e-12
CB828089 69 6e-12
AV777119 64 1e-10
TC19496 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, partia... 63 3e-10
AV767093 61 1e-09
BP075001 60 2e-09
>AV776921
Length = 435
Score = 181 bits (459), Expect = 6e-46
Identities = 86/144 (59%), Positives = 115/144 (79%)
Frame = +2
Query: 329 DVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDG 388
DV F YP+RPDV+I + L +PSG ALVG SGSGKSTVISL+ERFY+P +G++L+DG
Sbjct: 2 DVCFSYPSRPDVEILNKLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGDILLDG 181
Query: 389 VNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDK 448
++++L L+W+R+QIGLV+QEP LF TSI+ENI YGK+ AT EE+ A+ L++A+ FI+
Sbjct: 182 NDIRDLDLKWLRQQIGLVNQEPALFATSIKENILYGKDNATLEELKRAVKLSDAQSFINN 361
Query: 449 LPQGLDTMAGQNGTQLSGGQKQRI 472
LP+ L+T G+ G QLSGGQKQRI
Sbjct: 362 LPERLETQVGERGIQLSGGQKQRI 433
Score = 173 bits (438), Expect = 2e-43
Identities = 90/144 (62%), Positives = 109/144 (75%)
Frame = +2
Query: 1013 VNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGV 1072
V F+YP+RPD++I L L IPS K +ALVG SGSGKSTVISL+ERFY+P SG ILLDG
Sbjct: 5 VCFSYPSRPDVEILNKLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGDILLDGN 184
Query: 1073 DLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISN 1132
D++ L WLRQQ+GLV QEP LF SI+ NI YGK+ AT +E+ A ++A SFI+N
Sbjct: 185 DIRDLDLKWLRQQIGLVNQEPALFATSIKENILYGKD-NATLEELKRAVKLSDAQSFINN 361
Query: 1133 LPDGYDTSVGERGTQLSGGQKQRI 1156
LP+ +T VGERG QLSGGQKQRI
Sbjct: 362 LPERLETQVGERGIQLSGGQKQRI 433
>BI417718
Length = 515
Score = 174 bits (440), Expect = 1e-43
Identities = 90/165 (54%), Positives = 119/165 (71%)
Frame = +2
Query: 888 KVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAFIFYIGSVLVQHGKATFTEV 947
+V ++YS+KC GP K G++ GL+SGIGFG SF +L+ A F++G+ V G A+F++V
Sbjct: 29 RVGELYSRKCEGPVKTGIQRGLISGIGFGVSFFLLFSVYATTFHVGARFVGAGMASFSDV 208
Query: 948 FRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKPDIDSSSNAGVTRETVVGD 1007
F+V FALTM AI +S+ AP+++KAK ASIFEIID K ID +G T ++ G
Sbjct: 209 FQVLFALTMAAIGISRR---APNSSKAKIVTASIFEIIDRKSKIDPCDESGSTLDSTKGK 379
Query: 1008 IELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGKSTV 1052
IE HV+F YP+RPDIQIF DLSL+I + T+ALVGESGSGKSTV
Sbjct: 380 IEFCHVSFKYPSRPDIQIFPDLSLTIHAGTTVALVGESGSGKSTV 514
Score = 76.3 bits (186), Expect = 3e-14
Identities = 51/159 (32%), Positives = 70/159 (43%), Gaps = 41/159 (25%)
Frame = +2
Query: 252 EKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTYGLAMWYGSKLVIEKGYNGGTVMTV 311
E Y+ K + T +++G++SG G G+ F+ F Y G++ V + V V
Sbjct: 38 ELYSRKCEGPVKTGIQRGLISGIGFGVSFFLLFSVYATTFHVGARFVGAGMASFSDVFQV 217
Query: 312 IIALMTGGI-----------------------------------------IKGDIELRDV 330
+ AL I KG IE V
Sbjct: 218 LFALTMAAIGISRRAPNSSKAKIVTASIFEIIDRKSKIDPCDESGSTLDSTKGKIEFCHV 397
Query: 331 SFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTV 369
SF+YP+RPD+QIF SL + +GTT ALVG+SGSGKSTV
Sbjct: 398 SFKYPSRPDIQIFPDLSLTIHAGTTVALVGESGSGKSTV 514
>TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(9%)
Length = 712
Score = 171 bits (434), Expect = 5e-43
Identities = 84/115 (73%), Positives = 99/115 (86%)
Frame = +2
Query: 1136 GYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSV 1195
GYDT VGERGT LSGGQKQR+AIAR ++K P ILLLDEATSALDAESER+VQ+ALD+V V
Sbjct: 71 GYDTVVGERGTLLSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVVQDALDKVMV 250
Query: 1196 NRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVALHSSA 1250
NRTTV+VAHRL+TI+ AD I V+KNG + EKGRH+ L+ I DG YASLV LH++A
Sbjct: 251 NRTTVIVAHRLSTIKNADVITVLKNGVIVEKGRHETLINIKDGYYASLVQLHTTA 415
Score = 147 bits (372), Expect = 8e-36
Identities = 72/111 (64%), Positives = 92/111 (82%)
Frame = +2
Query: 452 GLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIIL 511
G DT+ G+ GT LSGGQKQR+AIARAI+K P ILLLDEATSALDAESER+VQ+AL+K+++
Sbjct: 71 GYDTVVGERGTLLSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVVQDALDKVMV 250
Query: 512 KRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRL 562
RTTV+VAHRL+TI+NAD+I V++ G IVE+G H L DG Y+ L++L
Sbjct: 251 NRTTVIVAHRLSTIKNADVITVLKNGVIVEKGRHETLINIKDGYYASLVQL 403
>BG662257
Length = 336
Score = 157 bits (397), Expect = 1e-38
Identities = 81/108 (75%), Positives = 96/108 (88%), Gaps = 2/108 (1%)
Frame = +1
Query: 1108 KEGG--ATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKN 1165
++GG ATE EIIAAA ANAH FIS+L GYDT VG+RG QLSGGQKQR+AIAR ++K+
Sbjct: 13 RKGGDAATEAEIIAAAELANAHKFISSLQQGYDTVVGDRGIQLSGGQKQRVAIARAIVKS 192
Query: 1166 PKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGAD 1213
PKILLLDEATSALDAESE++VQ+ALDRV V+RTT+VVAHRL+TI+GAD
Sbjct: 193 PKILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGAD 336
Score = 141 bits (355), Expect = 7e-34
Identities = 71/106 (66%), Positives = 87/106 (81%)
Frame = +1
Query: 424 GKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPK 483
G + AT+ EI A LANA KFI L QG DT+ G G QLSGGQKQR+AIARAI+K+PK
Sbjct: 19 GGDAATEAEIIAAAELANAHKFISSLQQGYDTVVGDRGIQLSGGQKQRVAIARAIVKSPK 198
Query: 484 ILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNAD 529
ILLLDEATSALDAESE++VQ+AL+++ + RTT+VVAHRL+TI+ AD
Sbjct: 199 ILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGAD 336
>BP055390
Length = 488
Score = 131 bits (329), Expect = 8e-31
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3
Query: 455 TMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRT 514
T GQ G QLSGGQKQRIAIARAILKNP ILLLDEATSALD ESE++VQEALE + RT
Sbjct: 204 TQVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMHGRT 383
Query: 515 TVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGL 548
+++AHRL+T+ NAD+IAVV+ G++VE GTH L
Sbjct: 384 VILIAHRLSTVVNADVIAVVENGQVVETGTHHTL 485
Score = 125 bits (313), Expect = 5e-29
Identities = 62/95 (65%), Positives = 75/95 (78%)
Frame = +3
Query: 1139 TSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRT 1198
T VG+RG QLSGGQKQRIAIAR +LKNP ILLLDEATSALD ESE++VQEAL+ RT
Sbjct: 204 TQVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMHGRT 383
Query: 1199 TVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELM 1233
+++AHRL+T+ AD IAV++NG V E G H L+
Sbjct: 384 VILIAHRLSTVVNADVIAVVENGQVVETGTHHTLL 488
>TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(7%)
Length = 552
Score = 125 bits (313), Expect = 5e-29
Identities = 60/88 (68%), Positives = 74/88 (83%)
Frame = +3
Query: 1163 LKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGA 1222
+K+P ILLLDE TSALD ESER+VQ+ALD+V VNRTTV+VAHRL+TI+ AD I V+KNG
Sbjct: 3 IKSPNILLLDEXTSALDVESERVVQDALDKVMVNRTTVIVAHRLSTIKSADVIIVLKNGV 182
Query: 1223 VAEKGRHDELMRITDGVYASLVALHSSA 1250
+ EKGRH+ L+ I DG YASLV LH++A
Sbjct: 183 IVEKGRHETLISIKDGYYASLVQLHTTA 266
Score = 103 bits (258), Expect = 1e-22
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +3
Query: 479 LKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGK 538
+K+P ILLLDE TSALD ESER+VQ+AL+K+++ RTTV+VAHRL+TI++AD+I V++ G
Sbjct: 3 IKSPNILLLDEXTSALDVESERVVQDALDKVMVNRTTVIVAHRLSTIKSADVIIVLKNGV 182
Query: 539 IVERGTHSGLTMDPDGAYSQLIRL 562
IVE+G H L DG Y+ L++L
Sbjct: 183 IVEKGRHETLISIKDGYYASLVQL 254
>AV411197
Length = 391
Score = 122 bits (306), Expect = 3e-28
Identities = 66/113 (58%), Positives = 86/113 (75%), Gaps = 1/113 (0%)
Frame = +3
Query: 1088 LVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQ 1147
L+ QEPI+F+ +IR NI Y + A+E E+ AA ANAH FIS+LP GYDT VG RG
Sbjct: 54 LIQQEPIIFSTTIRENIIYARHN-ASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVD 230
Query: 1148 LSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSV-NRTT 1199
L+ GQKQRIAIAR +LKN ILLLDEA+S++++ES R++QEALD + + N+TT
Sbjct: 231 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKTT 389
Score = 122 bits (305), Expect = 5e-28
Identities = 59/111 (53%), Positives = 80/111 (71%)
Frame = +3
Query: 405 LVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQL 464
L+ QEPI+F+T+IRENI Y + A++ E+ A +ANA FI LP G DT G G L
Sbjct: 54 LIQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDL 233
Query: 465 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTT 515
+ GQKQRIAIAR +LKN ILLLDEA+S++++ES R++QEAL+ +I+ T
Sbjct: 234 TPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKT 386
>BG662269
Length = 283
Score = 83.6 bits (205), Expect(2) = 8e-28
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = +2
Query: 1073 DLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHS 1128
+++T ++ WLRQQMG+V QEP+LFNE+IRANI YGK G ATE EIIAAA ANAH+
Sbjct: 17 EIQTLQVKWLRQQMGMVSQEPVLFNETIRANIAYGKGGNATEAEIIAAAELANAHN 184
Score = 65.1 bits (157), Expect(2) = 3e-22
Identities = 31/53 (58%), Positives = 42/53 (78%), Gaps = 1/53 (1%)
Frame = +2
Query: 391 LKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEG-ATDEEITTAITLANA 442
++ LQ++W+R+Q+G+VSQEP+LF +IR NIAYGK G AT+ EI A LANA
Sbjct: 20 IQTLQVKWLRQQMGMVSQEPVLFNETIRANIAYGKGGNATEAEIIAAAELANA 178
Score = 58.5 bits (140), Expect(2) = 8e-28
Identities = 28/34 (82%), Positives = 31/34 (90%)
Frame = +3
Query: 1139 TSVGERGTQLSGGQKQRIAIARTMLKNPKILLLD 1172
T VGERG QLSGGQKQR+AIAR ++KNPKILLLD
Sbjct: 180 TIVGERGIQLSGGQKQRVAIARAIVKNPKILLLD 281
Score = 58.2 bits (139), Expect(2) = 3e-22
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +3
Query: 453 LDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLD 488
+ T+ G+ G QLSGGQKQR+AIARAI+KNPKILLLD
Sbjct: 174 MPTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLD 281
>BP042979
Length = 513
Score = 110 bits (275), Expect = 1e-24
Identities = 55/170 (32%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
Frame = +2
Query: 848 QMKFLKGFSADAKVMYEEASQVANDAVSSIRTVASFCAESKVMDMYSKKCLGPAKQGVRL 907
Q F+ GFS D + + +A+Q+A +A++++RTVA+F +E+K++ +++ P ++
Sbjct: 2 QKMFMTGFSGDLEAAHVKATQLAGEAIANVRTVAAFNSEAKIVGLFTSNLEAPLQRCFWK 181
Query: 908 GLVSGIGFGCSFLVLYCTNAFIFYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTL 967
G +SG G+G + LY + A + S LV+HG + F++ RVF L ++A ++T TL
Sbjct: 182 GQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL 361
Query: 968 APDTNKAKDSAASIFEIIDSKPDID-SSSNAGVTRETVVGDIELQHVNFN 1016
APD K + S+F+++D + +I+ +A + + G++EL+HV+F+
Sbjct: 362 APDFIKGGRAMKSVFDLLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFS 511
Score = 51.6 bits (122), Expect = 8e-07
Identities = 25/86 (29%), Positives = 43/86 (49%)
Frame = +2
Query: 213 MAKMSSRGQIAYAEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKIAYTTMVKQGIVS 272
M S + A+ +A + + + +RTVA+F E K + + S ++ +G +S
Sbjct: 14 MTGFSGDLEAAHVKATQLAGEAIANVRTVAAFNSEAKIVGLFTSNLEAPLQRCFWKGQIS 193
Query: 273 GFGIGMLTFIAFCTYGLAMWYGSKLV 298
G G G+ F + +Y L +WY S LV
Sbjct: 194 GSGYGIAQFALYASYALGLWYASWLV 271
>BP039737
Length = 543
Score = 100 bits (250), Expect = 1e-21
Identities = 51/168 (30%), Positives = 91/168 (53%)
Frame = +3
Query: 876 SIRTVASFCAESKVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAFIFYIGSV 935
S V S+ ESK ++ YS K G + G+ G+G GC++ + + A +F+ V
Sbjct: 39 SSSNVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGV 218
Query: 936 LVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKPDIDSSS 995
+++G+ + F F+ + +++ Q+ + +K K + + EII KP I
Sbjct: 219 FIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIIEDL 398
Query: 996 NAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVG 1043
+ G + V G+IE + V F+YP+RPD+ IF++ S+ P+ KT+A+VG
Sbjct: 399 SDGKCLDEVNGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVG 542
Score = 77.0 bits (188), Expect = 2e-14
Identities = 47/164 (28%), Positives = 68/164 (40%), Gaps = 44/164 (26%)
Frame = +3
Query: 241 VASFTGEKKAIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTYGLAMWYGSKLVIE 300
V S+ GE KA+ Y+ I+ K G+ G G+G IA ++ L WY +
Sbjct: 51 VYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRN 230
Query: 301 KGYNGGTVMTVIIALMTGGI---------------------------------------- 320
+GG T I + + GG+
Sbjct: 231 GQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIIEDLSDGK 410
Query: 321 ----IKGDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVG 360
+ G+IE +DV+F YP+RPDV IF FS+F P+G T A+VG
Sbjct: 411 CLDEVNGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVG 542
>AV418183
Length = 298
Score = 99.0 bits (245), Expect = 4e-21
Identities = 53/98 (54%), Positives = 63/98 (64%)
Frame = +3
Query: 1071 GVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFI 1130
GV L L +++ +V QEP LFN SI NI YG +G +I AA ANAH FI
Sbjct: 3 GVPLAEISHRHLHRKISIVSQEPTLFNCSIEENIAYGFDGKLNSVDIENAAKMANAHEFI 182
Query: 1131 SNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKI 1168
S P+ Y T VGERG +LSGGQKQRIAIAR +L +PKI
Sbjct: 183 SKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKI 296
Score = 96.3 bits (238), Expect = 3e-20
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = +3
Query: 388 GVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDE-EITTAITLANAKKFI 446
GV L + R + +I +VSQEP LF SI ENIAYG +G + +I A +ANA +FI
Sbjct: 3 GVPLAEISHRHLHRKISIVSQEPTLFNCSIEENIAYGFDGKLNSVDIENAAKMANAHEFI 182
Query: 447 DKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKI 484
K P+ T G+ G +LSGGQKQRIAIARA+L +PKI
Sbjct: 183 SKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKI 296
>CB829290
Length = 546
Score = 82.0 bits (201), Expect = 5e-16
Identities = 35/108 (32%), Positives = 70/108 (64%)
Frame = -3
Query: 453 LDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILK 512
LD+ +NG S GQ+Q + + R +LK K+L+LDEAT+++D ++ ++Q+ L + +
Sbjct: 532 LDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSE 353
Query: 513 RTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLI 560
T + +AHR+T++ ++D++ ++ QG I E + + L D +++QL+
Sbjct: 352 STVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLV 209
Score = 74.7 bits (182), Expect = 8e-14
Identities = 34/108 (31%), Positives = 64/108 (58%)
Frame = -3
Query: 1138 DTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNR 1197
D++V E G S GQ+Q + + R +LK K+L+LDEAT+++D ++ ++Q+ L +
Sbjct: 529 DSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSES 350
Query: 1198 TTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVA 1245
T + +AHR+T++ +D + ++ G + E +L+ +A LVA
Sbjct: 349 TVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLVA 206
>AV413975
Length = 343
Score = 77.8 bits (190), Expect = 1e-14
Identities = 39/100 (39%), Positives = 61/100 (61%)
Frame = +2
Query: 973 KAKDSAASIFEIIDSKPDIDSSSNAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSLS 1032
KA ++ +F+I+D + S S G++EL V F+YP+RP + K +++
Sbjct: 47 KAAGASRRVFQIMDRVSSM-SKSGTKCPLGDQDGEVELDDVWFSYPSRPSHPVLKGITMK 223
Query: 1033 IPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGV 1072
+ +ALVG SG GK+T+ +L+ERFYDP G+ILL+GV
Sbjct: 224 LHPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGV 343
Score = 73.6 bits (179), Expect = 2e-13
Identities = 32/67 (47%), Positives = 48/67 (70%)
Frame = +2
Query: 323 GDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAG 382
G++EL DV F YP+RP + G ++ + G+ ALVG SG GK+T+ +L+ERFYDP G
Sbjct: 143 GEVELDDVWFSYPSRPSHPVLKGITMKLHPGSKVALVGPSGGGKTTIANLIERFYDPTKG 322
Query: 383 EVLIDGV 389
++L++GV
Sbjct: 323 KILLNGV 343
>AV768362
Length = 541
Score = 72.8 bits (177), Expect = 3e-13
Identities = 35/65 (53%), Positives = 51/65 (77%)
Frame = -2
Query: 1180 AESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGV 1239
AESE +VQ+A+D + RT +V+AHRL+T++ A+T+ VI +G VAEKG HDEL+ +GV
Sbjct: 540 AESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVVVISDGQVAEKGTHDELLS-QNGV 364
Query: 1240 YASLV 1244
Y++LV
Sbjct: 363 YSALV 349
Score = 65.5 bits (158), Expect = 5e-11
Identities = 29/68 (42%), Positives = 49/68 (71%)
Frame = -2
Query: 496 AESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGA 555
AESE +VQ+A++ I+ RT +V+AHRL+T++ A+ + V+ G++ E+GTH L + +G
Sbjct: 540 AESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVVVISDGQVAEKGTHDEL-LSQNGV 364
Query: 556 YSQLIRLQ 563
YS L++ Q
Sbjct: 363 YSALVKRQ 340
>TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance protein
(Fragment), partial (41%)
Length = 460
Score = 69.7 bits (169), Expect = 3e-12
Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = +3
Query: 340 VQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWI 399
V I G L +P G ++G SGSGKST++ L R ++P + V +D ++ +L + +
Sbjct: 129 VPILKGIHLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDARDICHLDVLSL 308
Query: 400 REQIGLVSQEPILFTTSIRENIAYGK----EGATDEEITTAITLAN 441
R ++G++ Q P LF ++ +N+ YG + TD+E+ + +A+
Sbjct: 309 RRKVGMLFQLPALFEGTVADNVRYGPQLRGQKLTDDEVRKLLIMAD 446
Score = 64.7 bits (156), Expect = 9e-11
Identities = 33/98 (33%), Positives = 56/98 (56%), Gaps = 3/98 (3%)
Frame = +3
Query: 1023 IQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWL 1082
+ I K + L IP + ++G SGSGKST++ L R ++P S + LD D+ + L
Sbjct: 129 VPILKGIHLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDARDICHLDVLSL 308
Query: 1083 RQQMGLVGQEPILFNESIRANIGYGKE---GGATEDEI 1117
R+++G++ Q P LF ++ N+ YG + T+DE+
Sbjct: 309 RRKVGMLFQLPALFEGTVADNVRYGPQLRGQKLTDDEV 422
>CB828089
Length = 511
Score = 68.6 bits (166), Expect = 6e-12
Identities = 33/110 (30%), Positives = 61/110 (55%)
Frame = +1
Query: 452 GLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIIL 511
GLD+ ++G S GQ+Q + RA+L+ +IL+LDEAT+++D ++ I+Q+ +
Sbjct: 46 GLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFA 225
Query: 512 KRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIR 561
T + VAHR+ T+ + + + GK+VE L + +L++
Sbjct: 226 DCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVK 375
Score = 67.8 bits (164), Expect = 1e-11
Identities = 35/109 (32%), Positives = 60/109 (54%)
Frame = +1
Query: 1136 GYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSV 1195
G D+SV E G S GQ+Q + R +L+ +IL+LDEAT+++D ++ I+Q+ +
Sbjct: 46 GLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFA 225
Query: 1196 NRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLV 1244
+ T + VAHR+ T+ + I +G + E LM+ ++ LV
Sbjct: 226 DCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLV 372
>AV777119
Length = 447
Score = 63.9 bits (154), Expect = 1e-10
Identities = 30/56 (53%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -1
Query: 509 IILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSG-LTMDPDGAYSQLIRLQ 563
+++ RT+VVVAHRL+TI+N D+IAV+ +G++VE+G+HS L P GAY L+ LQ
Sbjct: 447 VMVGRTSVVVAHRLSTIQNCDLIAVLDKGRVVEKGSHSNLLAKGPSGAYYSLVSLQ 280
Score = 55.1 bits (131), Expect = 7e-08
Identities = 30/55 (54%), Positives = 37/55 (66%), Gaps = 1/55 (1%)
Frame = -1
Query: 1193 VSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELM-RITDGVYASLVAL 1246
V V RT+VVVAHRL+TI+ D IAV+ G V EKG H L+ + G Y SLV+L
Sbjct: 447 VMVGRTSVVVAHRLSTIQNCDLIAVLDKGRVVEKGSHSNLLAKGPSGAYYSLVSL 283
>TC19496 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, partial (10%)
Length = 571
Score = 63.2 bits (152), Expect = 3e-10
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 1179 DAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDG 1238
D SER+VQ+AL+ + RTT+V+AHRL+T++ A IA+ +G +AE+G H EL+ G
Sbjct: 3 DTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSDGRIAEQGTHFELL-AKKG 179
Query: 1239 VYASLV 1244
YASLV
Sbjct: 180 QYASLV 197
Score = 61.6 bits (148), Expect = 7e-10
Identities = 32/69 (46%), Positives = 47/69 (67%)
Frame = +3
Query: 495 DAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDG 554
D SER+VQ+AL ++ RTT+V+AHRL+T++NA IA+ G+I E+GTH L + G
Sbjct: 3 DTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSDGRIAEQGTHFEL-LAKKG 179
Query: 555 AYSQLIRLQ 563
Y+ L+ Q
Sbjct: 180 QYASLVGTQ 206
>AV767093
Length = 603
Score = 61.2 bits (147), Expect = 1e-09
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 323 GDIELRDVSFRYPARPDVQ-IFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDA 381
G IEL + RY RP+ + G SL V G +VG++GSGKST+I +L R +P A
Sbjct: 379 GSIELNSLQVRY--RPNTPLVLKGISLTVQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSA 552
Query: 382 GEVLIDGVNLKNLQL 396
G+++IDG+N+ L L
Sbjct: 553 GKIIIDGINICTLGL 597
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/75 (38%), Positives = 49/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 1006 GDIELQHVNFNYPTRPDIQ-IFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNS 1064
G IEL + Y RP+ + K +SL++ + I +VG +GSGKST+I +L R +P++
Sbjct: 379 GSIELNSLQVRY--RPNTPLVLKGISLTVQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSA 552
Query: 1065 GRILLDGVDLKTFRL 1079
G+I++DG+++ T L
Sbjct: 553 GKIIIDGINICTLGL 597
>BP075001
Length = 403
Score = 60.5 bits (145), Expect = 2e-09
Identities = 31/93 (33%), Positives = 52/93 (55%)
Frame = +2
Query: 228 GNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTY 287
G+V +Q + +IRTV + EK+ + +++S ++ + +KQG G IG + + + T+
Sbjct: 2 GSVAEQCISSIRTVYPYVSEKQTLNRFSSALEKSMELGIKQGQTKGVVIGSIGLL-YATW 178
Query: 288 GLAMWYGSKLVIEKGYNGGTVMTVIIALMTGGI 320
W GS LV KG +GG V I ++ GGI
Sbjct: 179 AFQSWAGSVLVRTKGESGGQVFVAQICIIWGGI 277
Score = 53.5 bits (127), Expect = 2e-07
Identities = 37/130 (28%), Positives = 62/130 (47%)
Frame = +2
Query: 869 VANDAVSSIRTVASFCAESKVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAF 928
VA +SSIRTV + +E + ++ +S + G++ G G+ G S +LY T AF
Sbjct: 8 VAEQCISSIRTVYPYVSEKQTLNRFSSALEKSMELGIKQGQTKGVVIG-SIGLLYATWAF 184
Query: 929 IFYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSK 988
+ GSVLV+ + +VF + I++ +A + I E+ID K
Sbjct: 185 QSWAGSVLVRTKGESGGQVFVAQICIIWGGISLMSALPKLAFIIEASVAGTRIIEMIDRK 364
Query: 989 PDIDSSSNAG 998
P I+++ G
Sbjct: 365 PSINANGEKG 394
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.136 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,795,900
Number of Sequences: 28460
Number of extensions: 198718
Number of successful extensions: 1135
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of query: 1250
length of database: 4,897,600
effective HSP length: 101
effective length of query: 1149
effective length of database: 2,023,140
effective search space: 2324587860
effective search space used: 2324587860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144478.12