TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144477.8 + phase: 0 /pseudo
         (879 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC18710                                                                97  1e-20
AV780705                                                               79  3e-15
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)             59  3e-09
BP085058                                                               52  4e-07
TC12829                                                                50  1e-06
TC12836 GB|CAA71302.1|2292921|LJPANC pantoate--beta-alanine liga...    37  0.014
TC14414 similar to UP|Q84VW8 (Q84VW8) At3g55410, partial (12%)         29  3.7
BG662411                                                               28  4.9
BP065836                                                               28  6.3
BP029889                                                               28  8.3
BP032114                                                               28  8.3
TC9929 similar to UP|O81396 (O81396) Aconitase-iron regulated pr...    28  8.3

>TC18710 
          Length = 843

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 48/125 (38%), Positives = 70/125 (55%)
 Frame = +2

Query: 60  FVSGRSILDNTMDAIEIIHYMKSKVKGKKGDFALKLDISKTYDMIDWSYLRGVMTKMRFS 119
           F+ GR I DN +   E  H +       +    +KLD++K YD ++W +L   +    FS
Sbjct: 467 FIQGRQIQDNLLIVQEAFHAINRPGALGRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFS 646

Query: 120 DQWVKWIMMCVETVNYFVLVNGDVISQIIPGRGLRQGDPLSPYLFIICVEGLSALVRKDE 179
             WVK IM+ V  V+Y   +NG V  +++P RGLRQGDP SPYLF+  +E LS L++   
Sbjct: 647 TNWVKMIMILVSGVSYNYKINGVVGPKLLPQRGLRQGDPFSPYLFLFTMEVLSLLIQNSF 826

Query: 180 ARGEI 184
             G +
Sbjct: 827 NMGNL 841


>AV780705 
          Length = 524

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 34/95 (35%), Positives = 61/95 (63%)
 Frame = -2

Query: 268 GKYLGLPSMIGRSKKSTFSFIKDRIWKKINLWSSKSLSKAGREVLIKFVLQSIPTYFMSL 327
           G YLGLP++ GR+K  +  +I++++ +K+  W    L++AG+EVLIK ++Q+IP+Y M++
Sbjct: 490 GHYLGLPAIWGRNKSHSLVWIEEKVKEKLEGWKETLLNQAGKEVLIKAIIQAIPSYAMTI 311

Query: 328 FTHPVSLCDEIERIMNSFWWGHSGGQSRGLTGFLG 362
              P + C+ +  ++  FWW   G  +   TG +G
Sbjct: 310 VHFPKTFCNSLYALVADFWWKSQGEGAVEYTGAVG 206


>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
          Length = 912

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 42/131 (32%), Positives = 65/131 (49%)
 Frame = -3

Query: 190 CNNAPIISHLLFADDCFLFFRTNVDQASKMRAILSTYERAYGQAVNLQKSEIFCSRNVLT 249
           C N  I SHL FAD+  +F    ++  + +  +L  ++   G   N  KSE+F    V  
Sbjct: 388 CQNEEI-SHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTPNPAKSEVFIL--VKE 218

Query: 250 TVHNNIASILGVQVVIGTGKYLGLPSMIGRSKKSTFSFIKDRIWKKINLWSSKSLSKAGR 309
           T  N I ++LG +      + LG+P +  + K S    + DR   K+  W+ +SLS AGR
Sbjct: 217 TTKNQITNMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPSKLQHWTGRSLSYAGR 38

Query: 310 EVLIKFVLQSI 320
             LI  +L S+
Sbjct: 37  LQLINSILFSM 5


>BP085058 
          Length = 452

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 31/102 (30%), Positives = 47/102 (45%)
 Frame = +2

Query: 251 VHNNIASILGVQVVIGTGKYLGLPSMIGRSKKSTFSFIKDRIWKKINLWSSKSLSKAGRE 310
           + + + SI  +      GKY+  P   G   K  F F  DR+  ++    +  L+K  R 
Sbjct: 80  LRDRMVSITSIPFTDNIGKYMSFPIHQGHV*KEDFVFTLDRVISRLAC*KAYLLNKPARL 259

Query: 311 VLIKFVLQSIPTYFMSLFTHPVSLCDEIERIMNSFWWGHSGG 352
            L K VL +I  Y M L   P S+CD+I  ++  F W +  G
Sbjct: 260 TLAKPVLSAISMYVMQLNWLPQSICDQICTVVRHFVWENVNG 385


>TC12829 
          Length = 448

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/45 (53%), Positives = 32/45 (70%)
 Frame = +3

Query: 302 KSLSKAGREVLIKFVLQSIPTYFMSLFTHPVSLCDEIERIMNSFW 346
           K L +AGREVLIK V ++IPTY MS F  P S+C +IE ++  F+
Sbjct: 255 KFLYRAGREVLIKSVTKAIPTYIMSCFALPDSICSQIEGMVGKFY 389


>TC12836 GB|CAA71302.1|2292921|LJPANC pantoate--beta-alanine ligase {Lotus
            corniculatus var. japonicus;} , complete
          Length = 1310

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 18/43 (41%), Positives = 25/43 (57%)
 Frame = +1

Query: 199  LLFADDCFLFFRTNVDQASKMRAILSTYERAYGQAVNLQKSEI 241
            LLF  D  +F R    + +K+R IL  Y+ A G  +NL KSE+
Sbjct: 1102 LLFVGDGIIFCRATTPEENKIREILLMYQSAPGLLINLDKSEL 1230


>TC14414 similar to UP|Q84VW8 (Q84VW8) At3g55410, partial (12%)
          Length = 779

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 22/72 (30%), Positives = 37/72 (50%)
 Frame = +3

Query: 194 PIISHLLFADDCFLFFRTNVDQASKMRAILSTYERAYGQAVNLQKSEIFCSRNVLTTVHN 253
           P+I HL+F    F FFR  ++    +  +L T+E A    V      +FC + V+T  H 
Sbjct: 408 PMILHLVF----FFFFR--LEPEGGLIYLLLTFE*AEFHGVYFVLRFLFCCKEVITMRH* 569

Query: 254 NIASILGVQVVI 265
            +A  L V++++
Sbjct: 570 KVA--LPVELIL 599


>BG662411 
          Length = 503

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 308 GREVLIKFVLQSIP-TYFMSLFTHPVSLCDEIERIMNSFWWGHSG 351
           G ++LI F L S+  +  + LFT   +LC   E+I   F+WG SG
Sbjct: 251 GSKLLILFSLSSVV*SICIKLFTFYYNLC*RDEKI-RKFYWGGSG 382


>BP065836 
          Length = 541

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 627 FLSFLLFLFCYNKIWITRILSSKHYMIYLRTMHLYFVV-CCGVYGNKETTKC 677
           FLSF++F F         ++ S +  + LRT+ +  +   C +YG ++  KC
Sbjct: 226 FLSFMIFKFL--------MIGSSYLHVDLRTV*IRLIAGVCNIYGFRQNNKC 357


>BP029889 
          Length = 516

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 450 VMISQFGITTGLQMIFHLSHML 471
           V +SQF IT  LQ+IF +SH L
Sbjct: 114 VELSQFQITQQLQLIFFISHSL 49


>BP032114 
          Length = 509

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 10/43 (23%), Positives = 22/43 (50%)
 Frame = +3

Query: 613 IFFNVQVA*MFGACFLSFLLFLFCYNKIWITRILSSKHYMIYL 655
           +  N+ ++ + G C L++  F+FC  +  + R  +  +   YL
Sbjct: 228 LLINIAISILLGICLLAYFYFVFCNIRSVVQRFRTINNTKFYL 356


>TC9929 similar to UP|O81396 (O81396) Aconitase-iron regulated protein 1,
           partial (10%)
          Length = 583

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = +1

Query: 628 LSFLLFLFCYNKIWITRILSSKHYMIYLRTMHLYFVV 664
           +S  +FLF Y+ +W T +L+S +++  + TM  + ++
Sbjct: 406 ISDSIFLFPYDVVWRTTLLNSCYFLEVMLTMG*HLII 516


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.354    0.159    0.546 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,551,552
Number of Sequences: 28460
Number of extensions: 223117
Number of successful extensions: 2800
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 683
Number of HSP's gapped (non-prelim): 2237
length of query: 879
length of database: 4,897,600
effective HSP length: 98
effective length of query: 781
effective length of database: 2,108,520
effective search space: 1646754120
effective search space used: 1646754120
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 59 (27.3 bits)