BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144375.7 - phase: 0
(123 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8259 similar to UP|HMGL_SOYBN (P26585) HMG1/2-like protein (SB... 126 1e-30
TC8713 similar to UP|P93704 (P93704) HMG-1, partial (91%) 122 2e-29
TC17229 similar to UP|O49595 (O49595) HMG protein (AT3G51880/ORF... 101 3e-23
AW720001 49 2e-07
AV412571 43 2e-05
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 39 3e-04
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 38 4e-04
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 37 0.001
TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%) 37 0.001
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 35 0.003
TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 gluc... 35 0.004
AV773558 34 0.006
TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete 33 0.011
TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associ... 33 0.011
BP038960 33 0.014
AW164001 33 0.018
TC9642 33 0.018
CN825654 32 0.024
BP034655 32 0.024
TC12505 similar to UP|BAD00698 (BAD00698) Sericin 1A, partial (5%) 32 0.031
>TC8259 similar to UP|HMGL_SOYBN (P26585) HMG1/2-like protein (SB11
protein), partial (92%)
Length = 942
Score = 126 bits (316), Expect = 1e-30
Identities = 64/120 (53%), Positives = 85/120 (70%), Gaps = 9/120 (7%)
Frame = +2
Query: 2 ARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK- 60
A+ KA DP+KPKRP S FF+FM DFR F KENP+NK VS VGKAAG KW+SMS+AEK
Sbjct: 272 AKGKAAKDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKA 451
Query: 61 -------KKKMEYVKAIHAYNKKVA-GKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
K+K +Y K + AYNKK A G ++ + KS SE+ND D+DDDD++E+++++
Sbjct: 452 PYVAKAEKRKADYEKTMKAYNKKQAEGPAAADEEESEKSVSEVNDQDEDDDDSDEDDDDE 631
>TC8713 similar to UP|P93704 (P93704) HMG-1, partial (91%)
Length = 800
Score = 122 bits (306), Expect = 2e-29
Identities = 61/113 (53%), Positives = 81/113 (70%), Gaps = 9/113 (7%)
Frame = +2
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKA DP+KPKRP S FF++MS+FR +F+K+NP+NK V+ VGKAAG KW+SM+DAEK
Sbjct: 212 KKAAKDPNKPKRPSSAFFVYMSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPY 391
Query: 61 -----KKKMEYVKAIHAYNKKVA-GKKSSSGKSFVKSNSELNDDDDDDDDNEE 107
K K EY K + AYN +A K S+ + KS SE+NDDD+DDD+++E
Sbjct: 392 VARAEKAKEEYEKTLRAYNNGLAESKGSAEEEGSDKSKSEVNDDDEDDDEDDE 550
>TC17229 similar to UP|O49595 (O49595) HMG protein (AT3G51880/ORF13),
partial (66%)
Length = 540
Score = 101 bits (252), Expect = 3e-23
Identities = 53/101 (52%), Positives = 65/101 (63%), Gaps = 8/101 (7%)
Frame = +3
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKAK DP+KPKRP S FF+F+ DFR F+ ENP+ K VS VGKA GEKW+S++ AEK
Sbjct: 237 KKAKKDPNKPKRPPSAFFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPY 416
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELN 96
K+K EY K I+AYN K A + KS SE+N
Sbjct: 417 EAKAAKRKAEYEKLINAYNNKQASTADDVDEESDKSKSEIN 539
>AW720001
Length = 542
Score = 48.9 bits (115), Expect = 2e-07
Identities = 24/59 (40%), Positives = 32/59 (53%)
Frame = +3
Query: 3 RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKK 61
++K K DP+ PKR S F F R +K NP + VG+ GEKW+ MS EK+
Sbjct: 147 KQKKKKDPNAPKRAMSGFMFFSQMERENLKKTNPGISFTD-VGRVLGEKWKKMSTEEKE 320
>AV412571
Length = 322
Score = 42.7 bits (99), Expect = 2e-05
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 2 ARKKAKSDPSKPKRPQSPFFLFMSDFRVRF 31
A+ KA DP+KPKRP S FF+FM DFR F
Sbjct: 228 AKGKAAKDPNKPKRPPSAFFVFMEDFRKIF 317
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 38.5 bits (88), Expect = 3e-04
Identities = 15/18 (83%), Positives = 18/18 (99%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDD 113
+DDDDDDDD+EEEEEE+D
Sbjct: 179 DDDDDDDDDDEEEEEEED 232
Score = 37.0 bits (84), Expect = 0.001
Identities = 13/20 (65%), Positives = 20/20 (100%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDEV 115
+DDDDDDDD++EEEEE++++
Sbjct: 176 DDDDDDDDDDDEEEEEEEDL 235
Score = 31.2 bits (69), Expect = 0.053
Identities = 10/18 (55%), Positives = 17/18 (93%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEEDDE 114
D DDDDDD+++++EE++E
Sbjct: 170 DPDDDDDDDDDDDEEEEE 223
Score = 30.0 bits (66), Expect = 0.12
Identities = 9/24 (37%), Positives = 19/24 (78%)
Frame = +2
Query: 91 SNSELNDDDDDDDDNEEEEEEDDE 114
S + ++ D+DDDDD E+++ ++D+
Sbjct: 5 SRTRMSGDEDDDDDGEDDDGDEDD 76
Score = 29.3 bits (64), Expect = 0.20
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 87 SFVKSNSELNDDDDDDDDNEEEEEEDD 113
S + + + +DDDD +DD+ +E+++DD
Sbjct: 5 SRTRMSGDEDDDDDGEDDDGDEDDDDD 85
Score = 29.3 bits (64), Expect = 0.20
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 5/25 (20%)
Frame = +2
Query: 96 NDDDD-----DDDDNEEEEEEDDEV 115
+DDDD DDDD+EE+EEE+ V
Sbjct: 71 DDDDDAPGGGDDDDDEEDEEEEGGV 145
Score = 28.9 bits (63), Expect = 0.26
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEEDDE 114
DDDDD +D++ +E++DD+
Sbjct: 32 DDDDDGEDDDGDEDDDDD 85
Score = 28.5 bits (62), Expect = 0.34
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEEDDE 114
D+DDDDD +++ +EDD+
Sbjct: 26 DEDDDDDGEDDDGDEDDD 79
Score = 28.5 bits (62), Expect = 0.34
Identities = 15/41 (36%), Positives = 21/41 (50%), Gaps = 5/41 (12%)
Frame = +2
Query: 76 KVAGKKSSSGKSFVKSNSELNDDD-----DDDDDNEEEEEE 111
+++G + E +DDD DDDDD E+EEEE
Sbjct: 14 RMSGDEDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEEE 136
Score = 27.7 bits (60), Expect = 0.59
Identities = 8/19 (42%), Positives = 17/19 (89%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDE 114
++DDDDD ++++ +E+DD+
Sbjct: 26 DEDDDDDGEDDDGDEDDDD 82
Score = 26.9 bits (58), Expect = 1.00
Identities = 11/24 (45%), Positives = 18/24 (74%), Gaps = 6/24 (25%)
Frame = +2
Query: 97 DDDDDD------DDNEEEEEEDDE 114
D+DDDD DD+++EE+E++E
Sbjct: 65 DEDDDDDAPGGGDDDDDEEDEEEE 136
Score = 26.6 bits (57), Expect = 1.3
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Frame = +2
Query: 84 SGKSFVKSNSELNDDDDDDDDN------EEEEEEDDE 114
SG + E +D D+DDDD+ ++++EED+E
Sbjct: 20 SGDEDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEE 130
Score = 25.0 bits (53), Expect = 3.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 92 NSELNDDDDDDDDNEEEEEEDDE 114
NS D+DDD++ E+++ DE
Sbjct: 2 NSRTRMSGDEDDDDDGEDDDGDE 70
Score = 25.0 bits (53), Expect = 3.8
Identities = 11/29 (37%), Positives = 17/29 (57%)
Frame = +2
Query: 86 KSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K+ V S + +D D DD+ ++ EDDE
Sbjct: 350 KAGVPSKRKRSDKDGSGDDDSDDGGEDDE 436
Score = 23.9 bits (50), Expect = 8.5
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 57 DAEKKKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEE 110
D E++++ E + + + VA + S + E +D+ DD+DN++ E+
Sbjct: 203 DDEEEEEEEDLGTEYLVRRTVAAAEDEEASS----DFEPEEDEGDDNDNDDGEK 352
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 38.1 bits (87), Expect = 4e-04
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDDDD EEEE++DD+
Sbjct: 303 DDDDDDDDDGEEEEDDDDD 359
Score = 37.4 bits (85), Expect = 7e-04
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ + + +DDDDDDDD++ EEEEDD+
Sbjct: 279 EDDEDEDDDDDDDDDDDGEEEEDDD 353
Score = 37.4 bits (85), Expect = 7e-04
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 94 ELNDDDDDDDDNEEEEEEDDE 114
E +DDDDDDDD+ EEEE+DD+
Sbjct: 294 EDDDDDDDDDDDGEEEEDDDD 356
Score = 35.0 bits (79), Expect = 0.004
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ + E DDDDDDDD+++ EEE+D+
Sbjct: 276 EEDDEDEDDDDDDDDDDDGEEEEDD 350
Score = 34.3 bits (77), Expect = 0.006
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDDD EEE+++DD+
Sbjct: 306 DDDDDDDDGEEEEDDDDDD 362
Score = 33.5 bits (75), Expect = 0.011
Identities = 10/26 (38%), Positives = 24/26 (91%)
Frame = +3
Query: 89 VKSNSELNDDDDDDDDNEEEEEEDDE 114
V++++E +DDD+++D+E+E+++DD+
Sbjct: 237 VQTDNEEEEDDDEEEDDEDEDDDDDD 314
Score = 32.7 bits (73), Expect = 0.018
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +3
Query: 92 NSELNDDDDDDDDNEEEEEEDDE 114
N E DDD+++DD +E++++DD+
Sbjct: 249 NEEEEDDDEEEDDEDEDDDDDDD 317
Score = 32.7 bits (73), Expect = 0.018
Identities = 11/19 (57%), Positives = 17/19 (88%)
Frame = +3
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDD + EE++++DDE
Sbjct: 309 DDDDDDDGEEEEDDDDDDE 365
Score = 30.4 bits (67), Expect = 0.090
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +3
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ + E DD+D+DDD+++++++D E
Sbjct: 261 EDDDEEEDDEDEDDDDDDDDDDDGE 335
Score = 30.0 bits (66), Expect = 0.12
Identities = 8/24 (33%), Positives = 21/24 (87%)
Frame = +3
Query: 91 SNSELNDDDDDDDDNEEEEEEDDE 114
+ E +DD+++DD++E+++++DD+
Sbjct: 249 NEEEEDDDEEEDDEDEDDDDDDDD 320
Score = 30.0 bits (66), Expect = 0.12
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 97 DDDDDDDDNEEEEEEDDEV 115
++DDDDDD EEE E+ EV
Sbjct: 339 EEDDDDDDEEEEGSEEVEV 395
Score = 29.6 bits (65), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 5/25 (20%)
Frame = +3
Query: 96 NDDDD-----DDDDNEEEEEEDDEV 115
+DDDD DDDD++EEEE +EV
Sbjct: 315 DDDDDGEEEEDDDDDDEEEEGSEEV 389
Score = 28.5 bits (62), Expect = 0.34
Identities = 8/19 (42%), Positives = 17/19 (89%)
Frame = +3
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDD ++ E+++++D+E
Sbjct: 312 DDDDDDGEEEEDDDDDDEE 368
Score = 28.5 bits (62), Expect = 0.34
Identities = 7/24 (29%), Positives = 20/24 (83%)
Frame = +3
Query: 90 KSNSELNDDDDDDDDNEEEEEEDD 113
+ + + +DD+D+DD+++++++DD
Sbjct: 258 EEDDDEEEDDEDEDDDDDDDDDDD 329
Score = 28.1 bits (61), Expect = 0.45
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 92 NSELNDDDDDDDDNEEEEEE 111
+ E +DDDDDD+ EE EE
Sbjct: 327 DGEEEEDDDDDDEEEEGSEE 386
Score = 26.6 bits (57), Expect = 1.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 94 ELNDDDDDDDDNEEEEEEDDE 114
E DDDDDD++ E EE + E
Sbjct: 336 EEEDDDDDDEEEEGSEEVEVE 398
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 37.0 bits (84), Expect = 0.001
Identities = 14/36 (38%), Positives = 25/36 (68%)
Frame = +2
Query: 79 GKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
G+ S ++ + E D+D+D+DD+++EEEEDD+
Sbjct: 740 GEAEQSDFEDIEEDDEDGDEDEDEDDDDDEEEEDDD 847
Score = 35.4 bits (80), Expect = 0.003
Identities = 14/44 (31%), Positives = 28/44 (62%)
Frame = +2
Query: 71 HAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
HA + + S + + + + ++D+D+DDD++EEEE+DD+
Sbjct: 719 HAVSWFTGEAEQSDFEDIEEDDEDGDEDEDEDDDDDEEEEDDDD 850
Score = 35.0 bits (79), Expect = 0.004
Identities = 12/18 (66%), Positives = 18/18 (99%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEEDDE 114
D+D+DDDD+EEEE++DD+
Sbjct: 800 DEDEDDDDDEEEEDDDDD 853
Score = 34.3 bits (77), Expect = 0.006
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E D+DDDDD+ EE++++DDE
Sbjct: 785 EDGDEDEDEDDDDDEEEEDDDDDDE 859
Score = 30.0 bits (66), Expect = 0.12
Identities = 8/19 (42%), Positives = 19/19 (99%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDD++++++++++EDDE
Sbjct: 812 DDDDDEEEEDDDDDDEDDE 868
Score = 29.3 bits (64), Expect = 0.20
Identities = 8/25 (32%), Positives = 21/25 (84%)
Frame = +2
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E +DDD++++D+++++E+D+E
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDDEE 871
Score = 28.1 bits (61), Expect = 0.45
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 92 NSELNDDDDDDDDNEEEE 109
+ E DDDDDD+D+EE E
Sbjct: 824 DEEEEDDDDDDEDDEEGE 877
Score = 27.3 bits (59), Expect = 0.77
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 92 NSELNDDDDDDDDNEEEEE 110
+ E +DDDDDD+++EE E
Sbjct: 821 DDEEEEDDDDDDEDDEEGE 877
Score = 26.6 bits (57), Expect = 1.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEE 111
++DDDDDD ++EE E
Sbjct: 833 EEDDDDDDEDDEEGE 877
>TC12959 similar to UP|AAS52042 (AAS52042) ADR122Cp, partial (6%)
Length = 517
Score = 36.6 bits (83), Expect = 0.001
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +1
Query: 91 SNSELNDDDDDDDDNEEEEEEDDE 114
S+ +DDDDDDDD+E+E+++D+E
Sbjct: 112 SDGSSSDDDDDDDDSEDEDDDDNE 183
Score = 32.7 bits (73), Expect = 0.018
Identities = 13/27 (48%), Positives = 20/27 (73%)
Frame = +1
Query: 88 FVKSNSELNDDDDDDDDNEEEEEEDDE 114
F S S+ + DDDDDD++ E+E+DD+
Sbjct: 97 FWDSLSDGSSSDDDDDDDDSEDEDDDD 177
Score = 32.7 bits (73), Expect = 0.018
Identities = 11/24 (45%), Positives = 20/24 (82%)
Frame = +1
Query: 91 SNSELNDDDDDDDDNEEEEEEDDE 114
S+S+ +DDDDD +D ++++ EDD+
Sbjct: 121 SSSDDDDDDDDSEDEDDDDNEDDD 192
Score = 31.2 bits (69), Expect = 0.053
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 76 KVAGKKSSSGKSFVKSNSELNDDDDDDD----DNEEEEEEDDE 114
K+ SS + S +DDDDDDD D+++ E++DDE
Sbjct: 70 KIEDCPSSRFWDSLSDGSSSDDDDDDDDSEDEDDDDNEDDDDE 198
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 35.4 bits (80), Expect = 0.003
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 74 NKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
N K KK+ G + E N +D++D+D E++E++DD+
Sbjct: 503 NNKSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDDD 381
Score = 31.6 bits (70), Expect = 0.041
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2
Query: 92 NSELNDDDDDDDDNEEEEEEDDE 114
+ E +DDDD+DDD E++ ED+E
Sbjct: 404 DQEDDDDDDEDDDEEDDGGEDEE 336
Score = 30.0 bits (66), Expect = 0.12
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 84 SGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
+G+ + E +DDDDDD++++EE++ E
Sbjct: 437 NGEDEEDEDGEDQEDDDDDDEDDDEEDDGGE 345
Score = 28.9 bits (63), Expect = 0.26
Identities = 12/35 (34%), Positives = 20/35 (56%)
Frame = -2
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
++ G+ + + DDD++DD E+EEEE E
Sbjct: 425 EEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVE 321
Score = 26.6 bits (57), Expect = 1.3
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -2
Query: 96 NDDDDDDDDNEEEEEEDDEV 115
+D+DDD++D+ E+EE++ V
Sbjct: 383 DDEDDDEEDDGGEDEEEEGV 324
Score = 23.9 bits (50), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -2
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEE----EEEED 112
K S K + NDD+ D+DD+ + E EED
Sbjct: 653 KSQSEDKQHDAEGEDGNDDEGDEDDDGDGPFGEGEED 543
>TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 glucosidase
SCW10 precursor (Soluble cell wall protein 10) ,
partial (6%)
Length = 1209
Score = 35.0 bits (79), Expect = 0.004
Identities = 11/25 (44%), Positives = 22/25 (88%)
Frame = +2
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
K + + +DDDDDDDD+++++++DD+
Sbjct: 77 KPDDDDDDDDDDDDDDDDDDDDDDD 151
Score = 34.7 bits (78), Expect = 0.005
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K +++ F + S DDDDDDDD+++++++DD+
Sbjct: 32 KINTAPSGFKRLFSPKPDDDDDDDDDDDDDDDDDD 136
Score = 34.3 bits (77), Expect = 0.006
Identities = 13/39 (33%), Positives = 25/39 (63%)
Frame = +2
Query: 76 KVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K+ S + F + +DDDDDDDD+++++++DD+
Sbjct: 32 KINTAPSGFKRLFSPKPDDDDDDDDDDDDDDDDDDDDDD 148
Score = 33.9 bits (76), Expect = 0.008
Identities = 10/19 (52%), Positives = 19/19 (99%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDDDD+++++++DD+
Sbjct: 98 DDDDDDDDDDDDDDDDDDD 154
Score = 31.2 bits (69), Expect = 0.053
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K+ S K + + +DDDDDDDD+++++++ D+
Sbjct: 59 KRLFSPKPDDDDDDDDDDDDDDDDDDDDDDDDGDK 163
Score = 28.5 bits (62), Expect = 0.34
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDD 113
+DDDDDDDD ++++ + D
Sbjct: 128 DDDDDDDDDGDKKQPDSD 181
Score = 28.1 bits (61), Expect = 0.45
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDD 113
+DDDDDDDD++ ++++ D
Sbjct: 122 DDDDDDDDDDDGDKKQPD 175
Score = 28.1 bits (61), Expect = 0.45
Identities = 9/19 (47%), Positives = 16/19 (83%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDDDD+ ++++ D +
Sbjct: 125 DDDDDDDDDDGDKKQPDSD 181
Score = 26.6 bits (57), Expect = 1.3
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +2
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DDDDDDDD+++ +++ +
Sbjct: 119 DDDDDDDDDDDDGDKKQPD 175
>AV773558
Length = 469
Score = 34.3 bits (77), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (73%), Gaps = 3/35 (8%)
Frame = -2
Query: 88 FVKSNSELNDDDDDDDDNEE---EEEEDDEVRFFS 119
FV SE +DDDDDDDD+++ ++E+++E F+S
Sbjct: 384 FVLVYSEDDDDDDDDDDDDDDYTDDEDEEEGGFYS 280
>TC17927 UP|Q8GRY7 (Q8GRY7) bZIP with a Ring-finger motif, complete
Length = 1793
Score = 33.5 bits (75), Expect = 0.011
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDEVRF 117
K +S++ DDDDDDD ++ ++ ++EV++
Sbjct: 727 KESSQMEGDDDDDDDEDDVDDLENEVKY 810
Score = 26.6 bits (57), Expect = 1.3
Identities = 10/28 (35%), Positives = 20/28 (70%)
Frame = +1
Query: 86 KSFVKSNSELNDDDDDDDDNEEEEEEDD 113
+S +S+ DDDDDDD+++ ++ E++
Sbjct: 718 ESHKESSQMEGDDDDDDDEDDVDDLENE 801
>TC14766 similar to UP|Q7XXR8 (Q7XXR8) Nascent polypeptide associated
complex alpha chain, partial (58%)
Length = 600
Score = 33.5 bits (75), Expect = 0.011
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +2
Query: 95 LNDDDDDDDDNEEEEEEDDEV 115
+ DDD+DDDD ++++E+DD +
Sbjct: 134 VEDDDEDDDDEDDDDEDDDNI 196
Score = 28.1 bits (61), Expect = 0.45
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = +2
Query: 97 DDDDDDDDNEEEEEED 112
DDDD+DDDN E +E D
Sbjct: 167 DDDDEDDDNIEGQEGD 214
Score = 28.1 bits (61), Expect = 0.45
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 56 SDAEKKKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
S A + E + A H +K+ + V + + +DDD+DDDD +++ E E
Sbjct: 50 STAMTAQSQEELLAAHLEQQKIHDDEP------VVEDDDEDDDDEDDDDEDDDNIEGQE 208
>BP038960
Length = 524
Score = 33.1 bits (74), Expect = 0.014
Identities = 15/35 (42%), Positives = 23/35 (64%)
Frame = +3
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
+K + + V+ + E D DDD++ EEEEEE+DE
Sbjct: 273 QKGEAEQPRVEDSEEEAADYDDDEEEEEEEEEEDE 377
Score = 26.6 bits (57), Expect = 1.3
Identities = 8/23 (34%), Positives = 18/23 (77%)
Frame = +3
Query: 93 SELNDDDDDDDDNEEEEEEDDEV 115
++ +DD++++++ EEE+E D V
Sbjct: 324 ADYDDDEEEEEEEEEEDEHADRV 392
>AW164001
Length = 447
Score = 32.7 bits (73), Expect = 0.018
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 89 VKSNSELNDDDDDDDDNEEEEEEDDEVRFFSFL 121
V ++++D DDDDD+++++++DDE F+
Sbjct: 58 VYKEEDVDEDFDDDDDDDDDDDDDDEPATLGFV 156
>TC9642
Length = 657
Score = 32.7 bits (73), Expect = 0.018
Identities = 14/32 (43%), Positives = 21/32 (64%), Gaps = 1/32 (3%)
Frame = -3
Query: 85 GKSFVKSNSELND-DDDDDDDNEEEEEEDDEV 115
G +KS ND DDD+D+D +E+E+E E+
Sbjct: 298 GSGALKSTGAANDTDDDEDEDEDEDEDEASEI 203
Score = 28.1 bits (61), Expect = 0.45
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 77 VAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEE 111
V G S + KS +N +D+D+D+D++E+E E
Sbjct: 310 VKGLGSGALKSTGAANDTDDDEDEDEDEDEDEASE 206
>CN825654
Length = 580
Score = 32.3 bits (72), Expect = 0.024
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +2
Query: 80 KKSSSGKSFVKSNSELNDDDDDDDDNEE------EEEEDDEVRFFS 119
KK G F S+ L D +D+DD+EE E+EED++V F+
Sbjct: 11 KKGGGGSVFSASSFGLLGDGEDEDDDEEKSELTGEDEEDEQVVSFA 148
Score = 28.5 bits (62), Expect = 0.34
Identities = 16/46 (34%), Positives = 25/46 (53%)
Frame = +2
Query: 72 AYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDEVRF 117
A KK + S G + + + S + DD++D EE+EEE+ V F
Sbjct: 146 AGKKKPSKGGSKKGGASLFTASAFDAIDDENDGGEEQEEEEPVVSF 283
Score = 25.0 bits (53), Expect = 3.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 74 NKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
+KK G S SF ++DDD++ E+E+DE
Sbjct: 8 SKKGGGGSVFSASSFGLLGDGEDEDDDEEKSELTGEDEEDE 130
Score = 24.6 bits (52), Expect = 5.0
Identities = 14/47 (29%), Positives = 21/47 (43%)
Frame = +2
Query: 65 EYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEE 111
E V + K G G S +++ DD++D E+EEEE
Sbjct: 128 EQVVSFAGKKKPSKGGSKKGGASLFTASAFDAIDDENDGGEEQEEEE 268
>BP034655
Length = 517
Score = 32.3 bits (72), Expect = 0.024
Identities = 11/20 (55%), Positives = 19/20 (95%)
Frame = +1
Query: 95 LNDDDDDDDDNEEEEEEDDE 114
L+DDD+++++ EEEEEE++E
Sbjct: 130 LSDDDEEEEEEEEEEEEEEE 189
Score = 29.3 bits (64), Expect = 0.20
Identities = 9/19 (47%), Positives = 18/19 (94%)
Frame = +1
Query: 96 NDDDDDDDDNEEEEEEDDE 114
+DD++++++ EEEEEE++E
Sbjct: 136 DDDEEEEEEEEEEEEEEEE 192
Score = 28.9 bits (63), Expect = 0.26
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEE+EEDDE
Sbjct: 163 EEEEEEEEEEEEEEEEEEEDEEDDE 237
Score = 28.5 bits (62), Expect = 0.34
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEEEEE+DE
Sbjct: 151 EEEEEEEEEEEEEEEEEEEEEEEDE 225
Score = 28.5 bits (62), Expect = 0.34
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEEEEED+E
Sbjct: 154 EEEEEEEEEEEEEEEEEEEEEEDEE 228
Score = 28.1 bits (61), Expect = 0.45
Identities = 9/42 (21%), Positives = 26/42 (61%)
Frame = +1
Query: 73 YNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
+ ++A ++ + + E ++++++++ EEEEEE++E
Sbjct: 82 HRNEIAAAHLTAADFGLSDDDEEEEEEEEEEEEEEEEEEEEE 207
Score = 27.3 bits (59), Expect = 0.77
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 74 NKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
N+ A +++ + E ++++++++ EEEEEE++E
Sbjct: 88 NEIAAAHLTAADFGLSDDDEEEEEEEEEEEEEEEEEEEEEE 210
Score = 26.9 bits (58), Expect = 1.00
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 85 GKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
G S E ++++++++ EEEEEE++E
Sbjct: 127 GLSDDDEEEEEEEEEEEEEEEEEEEEEEEE 216
Score = 26.9 bits (58), Expect = 1.00
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEEEEE++E
Sbjct: 145 EEEEEEEEEEEEEEEEEEEEEEEEE 219
Score = 26.2 bits (56), Expect = 1.7
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEEE+E+D+
Sbjct: 160 EEEEEEEEEEEEEEEEEEEEDEEDD 234
Score = 25.8 bits (55), Expect = 2.2
Identities = 7/25 (28%), Positives = 19/25 (76%)
Frame = +1
Query: 90 KSNSELNDDDDDDDDNEEEEEEDDE 114
+ E ++++++++ EEEEEE+++
Sbjct: 148 EEEEEEEEEEEEEEEEEEEEEEEED 222
>TC12505 similar to UP|BAD00698 (BAD00698) Sericin 1A, partial (5%)
Length = 569
Score = 32.0 bits (71), Expect = 0.031
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3
Query: 99 DDDDDDNEEEEEEDDEVRFFS 119
DDD DD EEE+E+D++V FS
Sbjct: 390 DDDADDREEEDEDDEDVVAFS 328
Score = 24.6 bits (52), Expect = 5.0
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = -3
Query: 91 SNSELNDDDDDDDDNEEEEEE-----DDEVR 116
+ +++ D DD +++ EEEEEE DD+V+
Sbjct: 528 NTADVADVDDVNENGEEEEEEEVDDDDDDVQ 436
Score = 23.9 bits (50), Expect = 8.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 18/49 (36%)
Frame = -3
Query: 90 KSNSELNDDDDD------------------DDDNEEEEEEDDEVRFFSF 120
+ E++DDDDD DD ++ EEE++D+ +F
Sbjct: 477 EEEEEVDDDDDDVQVLPAAATSSHPKRKRDDDADDREEEDEDDEDVVAF 331
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.128 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,847,240
Number of Sequences: 28460
Number of extensions: 22219
Number of successful extensions: 1655
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of query: 123
length of database: 4,897,600
effective HSP length: 79
effective length of query: 44
effective length of database: 2,649,260
effective search space: 116567440
effective search space used: 116567440
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 49 (23.5 bits)
Medicago: description of AC144375.7