TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC143339.10 + phase: 0 /pseudo
         (349 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter li...    33  0.071
BF177637                                                               32  0.21
BP071089                                                               28  3.0
TC14391 similar to UP|Q93YG9 (Q93YG9) Insulin degrading enzyme, ...    27  3.9
BP075661                                                               27  6.7

>TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter like
           protein, partial (93%)
          Length = 1865

 Score = 33.1 bits (74), Expect = 0.071
 Identities = 33/138 (23%), Positives = 58/138 (41%), Gaps = 3/138 (2%)
 Frame = +2

Query: 111 RRPYFVVAGVVGTVSATIVAVGGEVSVVAALMCFVGVSASLAIADVTIDACIARNSIEVP 170
           RR    +A ++  V A  +  G   +++    C  G+    A+    + +    +S    
Sbjct: 314 RRYTIFLASILFLVGAVFMGYGPNFAILMFGRCVCGLGVGFALTTAPVYSA-ELSSASTR 490

Query: 171 GLAPDLQSLCGFCSGSGALLGYLAS---GFFVHHLGPQGSLGLMAVFPALTIVLGFVIYE 227
           G    L SL   C G G  +GY+++   G     LG +  LGL A+ P+L + LG +   
Sbjct: 491 GF---LTSLPEVCIGLGIFIGYISNYFLGKLALTLGWRLMLGLAAI-PSLGLALGILTMP 658

Query: 228 KRTTGLHNEKKKGVVENV 245
           +    L  + + G  + V
Sbjct: 659 ESPRWLVMQGRLGCAKKV 712


>BF177637 
          Length = 480

 Score = 31.6 bits (70), Expect = 0.21
 Identities = 17/38 (44%), Positives = 23/38 (59%)
 Frame = +2

Query: 171 GLAPDLQSLCGFCSGSGALLGYLASGFFVHHLGPQGSL 208
           GL+    SL G  S  GA+LG +ASG    ++G +GSL
Sbjct: 356 GLSVSEFSLFGSLSNVGAMLGAIASGQIAEYIGRKGSL 469


>BP071089 
          Length = 393

 Score = 27.7 bits (60), Expect = 3.0
 Identities = 16/68 (23%), Positives = 30/68 (43%)
 Frame = -3

Query: 268 MFLSLALNVTTHEGHFYWYTDSKVGPAFSQEFVGIIYAIGAVASIIGVLIYHKYLKNYTF 327
           + + +   VTT  G   W  D+      ++  +   Y +  V S++  L+Y    K YT+
Sbjct: 307 LLVIIVTKVTTSSGSLGWIPDN-----MNRGHLDYFYWLLTVLSLLNFLVYLWIAKRYTY 143

Query: 328 RNLVFYAQ 335
           + +   AQ
Sbjct: 142 KKVAGNAQ 119


>TC14391 similar to UP|Q93YG9 (Q93YG9) Insulin degrading enzyme, partial
           (10%)
          Length = 782

 Score = 27.3 bits (59), Expect = 3.9
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -3

Query: 170 PGLAPDLQSLCGFCSGSGALLGYLASGFFVHHL 202
           P + P LQ LC   +G    LGYL S F VH L
Sbjct: 330 PSVVPKLQ-LCIQKNGDSHELGYLKSSFEVHQL 235


>BP075661 
          Length = 437

 Score = 26.6 bits (57), Expect = 6.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 262 WKPSLYMFLSLALNVTTHEGHFYWYTDSKVGPAFSQEFVGIIYAI 306
           W+PS  + ++L LN+  H     W  +S V   F     G+++ I
Sbjct: 377 WRPSTRILMALHLNILIHSS---WPVESLVFAPFLATHGGLLFKI 252


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.325    0.141    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,140,655
Number of Sequences: 28460
Number of extensions: 84665
Number of successful extensions: 536
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of query: 349
length of database: 4,897,600
effective HSP length: 91
effective length of query: 258
effective length of database: 2,307,740
effective search space: 595396920
effective search space used: 595396920
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)