BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142396.3 - phase: 0
(432 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14935 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-lik... 218 2e-57
TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-lik... 206 5e-54
TC9837 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2... 142 1e-34
AV768666 117 4e-27
TC19937 weakly similar to GB|AAL87371.1|19548015|AY081718 AT4g33... 110 6e-25
TC20114 similar to UP|Q9LZ09 (Q9LZ09) Protein phosphatase-like p... 108 2e-24
TC17251 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 90 8e-19
TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17... 87 5e-18
TC16112 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17... 85 2e-17
BP034242 85 2e-17
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 83 1e-16
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 83 1e-16
TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete 79 1e-15
BP048498 49 1e-14
TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, pa... 74 6e-14
AV415023 72 2e-13
TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 71 4e-13
TC15266 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 70 7e-13
AV428005 64 5e-11
TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {... 62 2e-10
>TC14935 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (56%)
Length = 1089
Score = 218 bits (555), Expect = 2e-57
Identities = 121/268 (45%), Positives = 165/268 (61%), Gaps = 4/268 (1%)
Frame = +1
Query: 107 TLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMV 166
T+ A TEEG+ ++ +P + GSCCL G+I+++TL VAN GDSRVV+G V
Sbjct: 4 TIERAFLQTEEGYTALVSNSWNSRPQIANAGSCCLVGVIFQQTLFVANAGDSRVVLGKKV 183
Query: 167 NKK--IRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAY 224
+ A QL+ +HN N EAIREELR +HP+DP +V+ G W+VKG I VSR+IGD Y
Sbjct: 184 GNTDGVAAIQLSTEHNANLEAIREELRELHPNDPQIVVLKYGVWKVKGIIQVSRSIGDVY 363
Query: 225 LKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKK 284
+K + F RE +PEP +++A P + + L ND F+IFASDGLW+ LSN+K
Sbjct: 364 MKDARFN-REPLAAKFRLPEPMNMPIMTANPTILSHSLQPNDLFLIFASDGLWEHLSNEK 540
Query: 285 AAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVV 344
A +IV NPR G AK L+ AL AA +R++ Y ++ + RR FHDDISVIV+
Sbjct: 541 AVDIVNSNPRAGSAKILVKAALHEAASKREMRYSDLRKI----DKKVRRHFHDDISVIVL 708
Query: 345 FLDKTSFPRQPVLN--LSYTGSSDRPVQ 370
FL+ R VLN LSY + D ++
Sbjct: 709 FLNHDLISRGTVLNPPLSYRSALDHGLE 792
>TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (57%)
Length = 932
Score = 206 bits (525), Expect = 5e-54
Identities = 107/224 (47%), Positives = 149/224 (65%), Gaps = 2/224 (0%)
Frame = +1
Query: 137 GSCCLAGIIWKETLHVANLGDSRVVIGTMVNKK--IRAEQLTRDHNCNDEAIREELRAMH 194
G+CCL G+I+++TL VANLGDSR V+G V + A QL+ +HN N E IR+EL+ +H
Sbjct: 10 GTCCLVGVIFQQTLFVANLGDSRCVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKELH 189
Query: 195 PDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAE 254
PDDP +V+ +G WRVKG I VSR+IGD+Y+K ++F PK + PEP ++SA
Sbjct: 190 PDDPQIVVLKHGVWRVKGIIQVSRSIGDSYMKHAQFNREPINPKFRL-PEPMNMPIMSAN 366
Query: 255 PEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRK 314
P + + L +D F+IFASDGLW+ LSN++A +IV NPR G AKRL+ AL AA++R+
Sbjct: 367 PTILSHPLQPSDSFLIFASDGLWEHLSNEQAVDIVHSNPRAGSAKRLVKAALQEAARKRE 546
Query: 315 VTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPRQPVLN 358
+ Y ++ + RR FHDDI+VIV+FL+ R VLN
Sbjct: 547 MRYSDLRKI----DKKVRRHFHDDITVIVLFLNHDLISRGSVLN 666
>TC9837 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (43%)
Length = 727
Score = 142 bits (357), Expect = 1e-34
Identities = 74/146 (50%), Positives = 99/146 (67%)
Frame = +3
Query: 208 WRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQ 267
WRVKG I +SR+IGD YLK++EF + K + EPF R +LS+EP + L +DQ
Sbjct: 12 WRVKGIIQISRSIGDVYLKKAEFNREPLYAKFRL-REPFKRPILSSEPSITVHQLQPHDQ 188
Query: 268 FIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGR 327
FIIFASDGLW+ LSN++A +IVQ +PR+G A+RL+ TAL AAK+R++ Y ++ G
Sbjct: 189 FIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKTALQEAAKKREMRYSDLRRIDRG- 365
Query: 328 NNVSRRSFHDDISVIVVFLDKTSFPR 353
RR FHDDI+VIVV+LD R
Sbjct: 366 ---VRRHFHDDITVIVVYLDSNLMSR 434
>AV768666
Length = 463
Score = 117 bits (293), Expect = 4e-27
Identities = 60/137 (43%), Positives = 84/137 (60%), Gaps = 7/137 (5%)
Frame = +1
Query: 37 HCYGEFSSAVVQANTTMEDQSQIEVASNNA-------VFLGIYDGHGGTQASRFICEHLF 89
H GEFS AVVQAN +EDQS +E S + F+G+YDGHGG + SR+I EHL
Sbjct: 40 HLNGEFSMAVVQANNLLEDQSYLESGSLSTSDSGPYGTFVGVYDGHGGPETSRYINEHLV 219
Query: 90 KNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKET 149
++L + + ++ +R A+ ATE+GF+ + +P + VGSCCL G+I T
Sbjct: 220 RHLKK-----QQSMSVDVIRKAIQATEDGFMSLVAKQWSMKPQIAAVGSCCLIGVICNGT 384
Query: 150 LHVANLGDSRVVIGTMV 166
L++ANLGDSR V+G V
Sbjct: 385 LYIANLGDSRAVLGRAV 435
>TC19937 weakly similar to GB|AAL87371.1|19548015|AY081718
AT4g33920/F17I5_110 {Arabidopsis thaliana;}, partial
(30%)
Length = 593
Score = 110 bits (274), Expect = 6e-25
Identities = 57/117 (48%), Positives = 80/117 (67%)
Frame = +2
Query: 42 FSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNLLRFANDNEN 101
+S AV QAN+++EDQ Q+ + S + F+G+YDGHGG +ASRFI +LF L +FA++ E
Sbjct: 248 YSIAVAQANSSLEDQGQVYI-SPSETFVGVYDGHGGPEASRFIRNNLFSFLHKFASE-EG 421
Query: 102 DITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDS 158
++E ++ A SATEE FL K ++ +P + VGSCCL I K L+VANLGDS
Sbjct: 422 GLSEQVIKKAFSATEEEFLHLVKQSWTKRPQIASVGSCCLLXAISKGVLYVANLGDS 592
>TC20114 similar to UP|Q9LZ09 (Q9LZ09) Protein phosphatase-like protein,
partial (33%)
Length = 587
Score = 108 bits (269), Expect = 2e-24
Identities = 57/106 (53%), Positives = 73/106 (68%)
Frame = +1
Query: 242 VPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRL 301
+PE F + +LS EP + T L NDQF+IFASDGLW+ LSN++A IV NPRNGIA+RL
Sbjct: 19 LPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIARRL 198
Query: 302 LSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLD 347
+ AL AAK+R++ +Q G RR FHDDI+VIVVFL+
Sbjct: 199 VKAALREAAKKREMRVSDLQKIEQG----VRRHFHDDITVIVVFLN 324
>TC17251 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (30%)
Length = 715
Score = 89.7 bits (221), Expect = 8e-19
Identities = 47/89 (52%), Positives = 60/89 (66%)
Frame = +3
Query: 265 NDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAA 324
+DQFIIFASDGLW+ +N+ A +IVQ +P +GIAKRL+ AL AAK+R++ Y +
Sbjct: 3 HDQFIIFASDGLWEHFTNQDAVDIVQNHPHHGIAKRLVKMALQEAAKKREMRYSDLNKID 182
Query: 325 TGRNNVSRRSFHDDISVIVVFLDKTSFPR 353
G RR FHDDI+VIVVFLD R
Sbjct: 183 RG----VRRHFHDDITVIVVFLDSNLVSR 257
>TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;}, partial (28%)
Length = 466
Score = 87.0 bits (214), Expect = 5e-18
Identities = 44/94 (46%), Positives = 65/94 (68%)
Frame = +2
Query: 33 NLQSHCYGEFSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNL 92
+L+ H G+FS AV QAN+++EDQSQ+ S +A ++G+YDGHGG QASRF+ HLF L
Sbjct: 185 DLKPHASGDFSIAVAQANSSLEDQSQV-FTSPSATYVGVYDGHGGPQASRFVNNHLFPYL 361
Query: 93 LRFANDNENDITEATLRNAVSATEEGFLDFAKMN 126
+FA + + ++ ++ A SATEE FL K++
Sbjct: 362 HKFATE-QGGLSVDVIKKAFSATEEEFLHLVKLS 460
>TC16112 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;}, partial (21%)
Length = 612
Score = 85.1 bits (209), Expect = 2e-17
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +3
Query: 266 DQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAAT 325
D F+IFASDGLWD LS++ A E+V K PR GIAKRL+ AL AAK+R++ Y I
Sbjct: 3 DLFLIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKIDK 182
Query: 326 GRNNVSRRSFHDDISVIVVFLD 347
G RR FHDDI+VIV++LD
Sbjct: 183 G----IRRHFHDDITVIVIYLD 236
>BP034242
Length = 539
Score = 85.1 bits (209), Expect = 2e-17
Identities = 45/95 (47%), Positives = 61/95 (63%)
Frame = -1
Query: 255 PEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRK 314
P + R L D F+IFASDGLWD L+++ A EI+ ++PR GIAKRL+ AL AAK+
Sbjct: 539 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 360
Query: 315 VTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKT 349
Y ++ G RR FHDDI+VIV++LD +
Sbjct: 359 KRYEDLKRIEKG----VRRLFHDDITVIVLYLDNS 267
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 82.8 bits (203), Expect = 1e-16
Identities = 70/242 (28%), Positives = 110/242 (44%), Gaps = 11/242 (4%)
Frame = +3
Query: 64 NNAVFLGIYDGHGGTQASRFICEHLFKNLLR---FANDNENDIT-----EATLRNAVSAT 115
N + F G++DGHGG +A+ +I +++ K F +E D E +LR A
Sbjct: 600 NPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVDKVFLQEVENSLRKAFLLA 779
Query: 116 EEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVNKKIRAEQL 175
+ D +N G+ L I+ L VAN GD R V+ ++K A +
Sbjct: 780 DSALADDCSVNTSS-------GTTALTAFIFGRLLMVANAGDCRAVL----SRKGEAIDM 926
Query: 176 TRDHNCNDEAIREELRAMHPDDPNVVINDNG---SWRVKGFITVSRAIGDAYLKRSEFTL 232
+ DH R ++P + V + G + G ++V+RA+GD +K
Sbjct: 927 SEDH-----------RPIYPSERRRVEDLGGYIEDGYLNGVLSVTRALGDWDMK------ 1055
Query: 233 RESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKN 292
PK P P L AEPE VLT++D+F+I DG+WD +S++ A +V+K
Sbjct: 1056---LPKG--APSP-----LIAEPEFRQMVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKG 1205
Query: 293 PR 294
R
Sbjct: 1206LR 1211
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 82.8 bits (203), Expect = 1e-16
Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 3/292 (1%)
Frame = +3
Query: 43 SSAVVQANTTMEDQSQIEVAS-NNAVFLGIYDGHGGTQASRFICEHLFKNLLRFANDNEN 101
S +VV + MED +E + ++DGHGG Q + E L++ + N
Sbjct: 402 SVSVVGSRKEMEDAVSVETGCVTKCDYFAVFDGHGGAQVAEACRERLYRLVAEEVERCGN 581
Query: 102 DITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVV 161
+ E + EG L VGS + ++ + +AN GD R V
Sbjct: 582 GVEEVDWEEVM----EGCFRNMDGEVAGNAALRTVGSTAVVAVVAAAEVVIANCGDCRAV 749
Query: 162 IGTMVNKKIRAEQLTRDHNCN--DEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRA 219
+G + A L+ DH + DE +R E + VIN NG RV G + SR+
Sbjct: 750 LG----RGGEAVDLSSDHKPDRPDELMRIE------EAGGKVINWNGQ-RVLGVLATSRS 896
Query: 220 IGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDF 279
IGD YL R + ++PE+ + D+F+I ASDGLWD
Sbjct: 897 IGDQYL----------------------RPYVISKPEVTVTKRSSKDEFLILASDGLWDV 1010
Query: 280 LSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVS 331
+S++ A ++V+K NG +R+ + + A++ + +I A R+N S
Sbjct: 1011ISSEMACQVVRK-CLNGQIRRICNENQSRASEAATL-LAEIALAKGSRDNTS 1160
>TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete
Length = 1338
Score = 79.0 bits (193), Expect = 1e-15
Identities = 82/266 (30%), Positives = 123/266 (45%), Gaps = 7/266 (2%)
Frame = +1
Query: 48 QANTTMEDQ--SQIEVASNNAVFL-GIYDGHGGTQASRFICEHLFKNLLRFANDNENDIT 104
+++ MED +Q + NN + L I+DGH G ++ +LF N+L+ E D
Sbjct: 349 RSDHAMEDYVVAQFKTVDNNELGLFAIFDGHSGHNVPDYLQSNLFDNILK-----EPDFW 513
Query: 105 EATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWK-ETLHVANLGDSRVVIG 163
V A ++ ++D LG GS + I+ + L VANLGDSR V+
Sbjct: 514 T----KPVEAVKKAYVDTDSTILEKSGELGRGGSTAVTAILINCQKLVVANLGDSRAVLC 681
Query: 164 TMVNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSW-RVKGFITVSRAIGD 222
K A L+ DH E+ E++R + V N G RV G + VSRA GD
Sbjct: 682 ----KNGEAIPLSVDHEPATES--EDIR----NRGGFVSNFPGDVPRVDGQLAVSRAFGD 831
Query: 223 AYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSN 282
LK+ LS+EP + ++ D+ +FII ASDGLW +SN
Sbjct: 832 KSLKKH----------------------LSSEPHVTVELIDDDAEFIILASDGLWKVMSN 945
Query: 283 KKAAEIVQ--KNPRNGIAKRLLSTAL 306
++A + ++ K+ R+ AK L AL
Sbjct: 946 QEAVDAIRNVKDARSA-AKNLTEEAL 1020
>BP048498
Length = 470
Score = 49.3 bits (116), Expect(2) = 1e-14
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -1
Query: 265 NDQFIIFASDGLWDFLSNKKAAEIVQKNPR 294
ND F+IFASDGLW+ LSN+KA +IV NPR
Sbjct: 467 NDLFLIFASDGLWEHLSNEKAVDIVNSNPR 378
Score = 47.0 bits (110), Expect(2) = 1e-14
Identities = 31/77 (40%), Positives = 44/77 (56%), Gaps = 2/77 (2%)
Frame = -2
Query: 296 GIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPRQP 355
G AK L+ AL AA++R++ Y ++ + RR FHDDISVIV+FL+ R
Sbjct: 301 GSAKILVKAALHEAARKREMRYSDLRKI----DQKVRRHFHDDISVIVLFLNHDLISRGT 134
Query: 356 VLN--LSYTGSSDRPVQ 370
VLN LSY + D ++
Sbjct: 133 VLNPPLSYRSALDHGLE 83
>TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, partial (63%)
Length = 1000
Score = 73.6 bits (179), Expect = 6e-14
Identities = 53/154 (34%), Positives = 77/154 (49%)
Frame = +3
Query: 137 GSCCLAGIIWKETLHVANLGDSRVVIGTMVNKKIRAEQLTRDHNCNDEAIREELRAMHPD 196
GSCC+ +I L V+N GD R VI ++ AE LT DH + E RE + +
Sbjct: 225 GSCCVTALIRNGNLVVSNAGDCRAVI----SRGGVAEALTTDHRPSREDERERIETLG-- 386
Query: 197 DPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPE 256
V G WR++G + VSR+IGD +LK+ + EP T+ V+ EPE
Sbjct: 387 --GYVDLCRGVWRIQGSLAVSRSIGDRHLKQW------------VTAEPETK-VIKIEPE 521
Query: 257 MHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQ 290
+I ASDGLWD +SN++A ++ +
Sbjct: 522 ---------HDLLILASDGLWDKVSNQEAVDLAR 596
Score = 32.0 bits (71), Expect = 0.20
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 64 NNAVFLGIYDGHGGTQASRFICEHL 88
N F G++DGHGG +A+ F +L
Sbjct: 38 NKLAFFGVFDGHGGAKAAEFAANNL 112
>AV415023
Length = 385
Score = 72.0 bits (175), Expect = 2e-13
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +2
Query: 33 NLQSHCYGEFSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNL 92
+L+ H G+FS AV QAN+++EDQSQ+ S +A ++G+YDGH G QASRF+ HLF L
Sbjct: 182 DLKPHASGDFSIAVAQANSSLEDQSQV-FTSPSATYVGVYDGHSGPQASRFVNNHLFPYL 358
Query: 93 LRFAND 98
+FA +
Sbjct: 359 HKFATE 376
>TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (23%)
Length = 277
Score = 70.9 bits (172), Expect = 4e-13
Identities = 36/81 (44%), Positives = 52/81 (63%)
Frame = +2
Query: 86 EHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGII 145
+HLF++L RFA+++++ E +R A ATEEGFL + + VGSCCL G+I
Sbjct: 2 DHLFQHLKRFASEHKSMSVEV-IRKAYQATEEGFLSVVTKLWPMNAQIASVGSCCLVGVI 178
Query: 146 WKETLHVANLGDSRVVIGTMV 166
L++ANLGDSR V+G +V
Sbjct: 179 CGGVLYIANLGDSRAVLGRVV 241
>TC15266 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (25%)
Length = 725
Score = 70.1 bits (170), Expect = 7e-13
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +1
Query: 277 WDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFH 336
W+ LSN+ A +IVQ +P +G A+RL+ TAL AAK+R++ Y ++ G RR FH
Sbjct: 1 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKIDRG----VRRHFH 168
Query: 337 DDISVIVVFLDKTSFPR 353
DDI+V+VVFLD R
Sbjct: 169 DDITVVVVFLDSNLVSR 219
>AV428005
Length = 330
Score = 63.9 bits (154), Expect = 5e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +1
Query: 167 NKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLK 226
N++++A QLT H +DEA R +L A HPDDP ++ + +VKG + V+RA G YLK
Sbjct: 37 NERLKAIQLTNSHTVDDEAERAQLLANHPDDPKTIV----AGKVKGKLKVTRAFGVGYLK 204
Query: 227 RSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFII 270
+ L ++ + V + +S +P ++ ++++DQF+I
Sbjct: 205 KK--NLNDALMGILRVSNLKSPPYVSTDPSVNVHKISNSDQFVI 330
>TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {Arabidopsis
thaliana;}, partial (46%)
Length = 996
Score = 62.0 bits (149), Expect = 2e-10
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +3
Query: 249 GVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAV 308
GV+S PE R LTD DQFI+ ASDG+WD LSN++ EIV +P A R T +
Sbjct: 207 GVISI-PEFSHRQLTDRDQFIVIASDGVWDVLSNEEVVEIVSSSPTRASAAR---TVVNS 374
Query: 309 AAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLD-----KTSFPRQPVLNLS-YT 362
AA+ K+ Y S DD +V+ +FLD ++ + Q + + +
Sbjct: 375 AAREWKLKY--------------PTSRMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQS 512
Query: 363 GSSDRPVQSDFAQ 375
S P++SD Q
Sbjct: 513 NHSGNPIESDDGQ 551
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,389,406
Number of Sequences: 28460
Number of extensions: 72997
Number of successful extensions: 413
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of query: 432
length of database: 4,897,600
effective HSP length: 93
effective length of query: 339
effective length of database: 2,250,820
effective search space: 763027980
effective search space used: 763027980
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC142396.3