BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142222.3 + phase: 0
(326 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526 At2g01... 50 5e-07
TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding l... 39 0.002
TC10270 homologue to UP|Q8VXT0 (Q8VXT0) Translation initiation f... 34 0.038
TC16832 32 0.11
TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) prec... 31 0.32
TC14611 similar to UP|Q8LPB2 (Q8LPB2) Glycine-rich RNA binding p... 30 0.72
TC8296 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1... 30 0.72
TC19911 weakly similar to PIR|A44805|A44805 eggshell protein pre... 29 0.94
TC14850 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein ... 29 1.2
AV408141 29 1.2
BI420351 29 1.2
CB828471 29 1.2
BP059341 29 1.2
BP045560 28 1.6
TC12971 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F14... 28 1.6
TC17420 similar to UP|Q9FQ74 (Q9FQ74) Biotin carboxyl carrier pr... 28 1.6
AV421856 28 2.7
TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like prot... 28 2.7
BP048525 27 3.6
TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protei... 27 3.6
>TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526
At2g01100/F23H14.7 {Arabidopsis thaliana;}, partial
(33%)
Length = 902
Score = 50.1 bits (118), Expect = 5e-07
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Frame = +3
Query: 43 DDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDE----- 97
D + + L + KK YD D DE R+ H+ HK+ HYD +
Sbjct: 348 DAEARERKLKAAKHKKRADSDSESDYDSD---DESKRTSRRSHRKHKKRSHYDSDHEKRK 518
Query: 98 DSLDSLLPKQHQAERGHTRYDDEDSL--DEVLPKQRQAKRGRSHY------DDDDSLDEV 149
+ L K+ +E D+ +S +E K++Q K+ R D D S DEV
Sbjct: 519 EKLSKRKTKKWSSESSDFSGDESESRSEEERRRKRKQKKKLRDQVSRSDSSDSDSSADEV 698
Query: 150 LPKQHHAKR-------GHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQ 202
++ KR G D+++ P + KRH H ++ E L D H
Sbjct: 699 SKRKRQHKRHRVTKSSGSDFSSDEENSPVRKRSHGKHHKRHRHSESSESDLSSD--DIHH 872
Query: 203 AKRGRSHY 210
K R H+
Sbjct: 873 KKSHRKHH 896
Score = 39.7 bits (91), Expect = 7e-04
Identities = 38/181 (20%), Positives = 62/181 (33%), Gaps = 19/181 (10%)
Frame = +3
Query: 120 EDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQA 179
E L K+R S YD DD + H + HYD D + L K++
Sbjct: 363 ERKLKAAKHKKRADSDSESDYDSDDESKRTSRRSHRKHKKRSHYDSDHEKRKEKLSKRKT 542
Query: 180 KK---RHPHYDNDEDSLHEDLPKNHQAKR--------GRSHYDVEDNLLDGVLPKQPQAK 228
KK + DE + + + K+ RS D+ D V K+ +
Sbjct: 543 KKWSSESSDFSGDESESRSEEERRRKRKQKKKLRDQVSRSDSSDSDSSADEV-SKRKRQH 719
Query: 229 KRHPHYDNDGDSLHEDLPKNHQAERGQPRY--------DDDDDLPDGVLPKQRQAKKLHP 280
KRH + G D + +R ++ + DL + ++ +K H
Sbjct: 720 KRHRVTKSSGSDFSSDEENSPVRKRSHGKHHKRHRHSESSESDLSSDDIHHKKSHRKHHK 899
Query: 281 H 281
H
Sbjct: 900 H 902
Score = 32.3 bits (72), Expect = 0.11
Identities = 38/166 (22%), Positives = 62/166 (36%), Gaps = 18/166 (10%)
Frame = +3
Query: 97 EDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDD-DSLDEVLPKQHH 155
E L + K+ + YD +D + + + RSHYD D + E L K+
Sbjct: 363 ERKLKAAKHKKRADSDSESDYDSDDESKRTSRRSHRKHKKRSHYDSDHEKRKEKLSKRKT 542
Query: 156 AKRGHPHYDDDDDLPDGVLPKQQAKKRHPHY----------DNDEDSLHEDLPK-NHQAK 204
K D D + +++ +KR +D DS +++ K Q K
Sbjct: 543 KKWSSESSDFSGDESESRSEEERRRKRKQKKKLRDQVSRSDSSDSDSSADEVSKRKRQHK 722
Query: 205 RGR----SHYDVEDNLLDGVLPKQPQAK--KRHPHYDNDGDSLHED 244
R R S D + + + K+ K KRH H ++ L D
Sbjct: 723 RHRVTKSSGSDFSSDEENSPVRKRSHGKHHKRHRHSESSESDLSSD 860
Score = 27.3 bits (59), Expect = 3.6
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 258 YDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLPKNHQAKRGRPLYDDTDSLDEVLP 317
YD DD+ R+ KK HYD+D + E L K K D + E
Sbjct: 423 YDSDDESKRTSRRSHRKHKK-RSHYDSDHEKRKEKLSKRKTKKWSSESSDFSGDESESRS 599
Query: 318 ARRRRHYR 325
RR R
Sbjct: 600 EEERRRKR 623
>TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding
like-protein, partial (16%)
Length = 779
Score = 38.5 bits (88), Expect = 0.002
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 10/173 (5%)
Frame = +2
Query: 54 RRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDEDSLDSLLPKQHQAERG 113
R RKKH + R H D D +++H + K Y Y + + +HQ
Sbjct: 83 RSRKKHRS-HRSSHTSRDRDRDG--RKHKRRHSSSKDKYSY--RGAKHGISDDEHQHSSH 247
Query: 114 HTRYDDEDSLDEVLPKQRQA---------KRGRSHYDDDDSLDEVLPKQHHAK-RGHPHY 163
H +YD ++RQ K R H + S DE + H K + H
Sbjct: 248 HHKYDSSSDEKHRSSRRRQREDSMSDHEHKHSRRHKHETSSEDERRHRSRHTKHKSRSHV 427
Query: 164 DDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNL 216
+ + +L +G + K ++ E + E A G DV D L
Sbjct: 428 ERESELEEGEVMKSDKSQQASEV---ERASREPSASLSNANHGPEISDVSDEL 577
>TC10270 homologue to UP|Q8VXT0 (Q8VXT0) Translation initiation factor
(eIF-1A), partial (98%)
Length = 619
Score = 33.9 bits (76), Expect = 0.038
Identities = 31/123 (25%), Positives = 42/123 (33%)
Frame = -1
Query: 181 KRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDS 240
K+H + +D S + K Q K+G Y PQ + H H
Sbjct: 619 KKHQNSTHDSSSNKQ**LKFKQTKKGFRFYQYP----------HPQTRCNH*HQH----- 485
Query: 241 LHEDLPKNHQAERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLPKNHQAK 300
H P +HQ+ Y + P P Q + HP Y P NH A+
Sbjct: 484 -HPPHPSHHQSPHSVSYYPEALHTPSEA*PHQAYTSESHPPYH----------PGNHGAQ 338
Query: 301 RGR 303
RGR
Sbjct: 337 RGR 329
>TC16832
Length = 710
Score = 32.3 bits (72), Expect = 0.11
Identities = 16/46 (34%), Positives = 27/46 (57%)
Frame = -3
Query: 86 QAHKRHYHYDDEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQR 131
Q + HYHY + DS S P Q ++ HT++D + S ++ P+Q+
Sbjct: 708 QQKRSHYHYPEHDSDISHGPSQIKSNPFHTQHDYQSS-TKIYPRQK 574
>TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) precursor,
partial (51%)
Length = 1566
Score = 30.8 bits (68), Expect = 0.32
Identities = 26/149 (17%), Positives = 60/149 (39%), Gaps = 19/149 (12%)
Frame = +1
Query: 141 DDDDSLDEVLPKQHHAKRGHPH------------YDDDDDLPDGVLPKQQAKKRHPHYDN 188
+D+D DE ++ H + P D+D+D + ++ +R H++
Sbjct: 508 EDEDEEDEDEDQEQHGRHSRPSGRRTRRPSREEDEDEDEDEEERQGGRRGPGERQRHFER 687
Query: 189 DEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDG-------DSL 241
+E+ E+ + K + + E+ +P + +++ R ++G +
Sbjct: 688 EEEEEREERGPRGRGKHWQREEEEEEEESRRTIPSRRESRGRGGCRTSNGLEENFCTLKI 867
Query: 242 HEDLPKNHQAERGQPRYDDDDDLPDGVLP 270
HE++ + +A+ PR D+ LP
Sbjct: 868 HENINRPSRADLYNPRAGRISDINSLTLP 954
>TC14611 similar to UP|Q8LPB2 (Q8LPB2) Glycine-rich RNA binding protein,
partial (20%)
Length = 760
Score = 29.6 bits (65), Expect = 0.72
Identities = 21/64 (32%), Positives = 31/64 (47%), Gaps = 4/64 (6%)
Frame = +3
Query: 107 QHQAERGHTR---YDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGH-PH 162
Q + E G R DD+D +E +++ Y DD S D+ K+HH K H +
Sbjct: 219 QEEVEYGRERPPRLDDDDDDNEGYARKK--------YGDDGSDDDDERKKHHHKHHHRKN 374
Query: 163 YDDD 166
YDD+
Sbjct: 375 YDDE 386
>TC8296 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;}, partial (55%)
Length = 1276
Score = 29.6 bits (65), Expect = 0.72
Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 2/139 (1%)
Frame = +2
Query: 32 SQARRGHPRYDDDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRH 91
S++R R+ DDH DR ++ R + Y+ R +H+ R
Sbjct: 434 SRSRSPRRRHRDDHRSSR---DRDYRRRSRSRSYDKYE-----------RGDRHRGRDRD 571
Query: 92 YHYDDEDSLDSLLPKQHQAERGHTRYDDED--SLDEVLPKQRQAKRGRSHYDDDDSLDEV 149
Y SL K RG RYDDE S + + A+R S V
Sbjct: 572 YRRRSRSRSASLDYK----GRGRGRYDDEPSRSRSRSVDSRSPARRSPSPRRSPSPKRSV 739
Query: 150 LPKQHHAKRGHPHYDDDDD 168
PK+ + R P + D+
Sbjct: 740 SPKRSTSPRKSPRGESPDN 796
>TC19911 weakly similar to PIR|A44805|A44805 eggshell protein precursor -
fluke (Schistosoma haematobium) {Schistosoma
haematobium;} , partial (24%)
Length = 350
Score = 29.3 bits (64), Expect = 0.94
Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 4/107 (3%)
Frame = -2
Query: 151 PKQHHAK----RGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRG 206
P HH + R H H+ +Q PH ++ LH + + + G
Sbjct: 295 PHSHHYRWKGLRHHTHHHH-----------RQIDPHDPH-SRQQNVLHRRNHRRYGRQNG 152
Query: 207 RSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDSLHEDLPKNHQAER 253
H++ + D + Q H HY NDG H + +N Q R
Sbjct: 151 YHHHNHRQRVHD----RWSQNAYPHVHYQNDGGHSHVNHRRNDQCFR 23
>TC14850 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37,
partial (25%)
Length = 577
Score = 28.9 bits (63), Expect = 1.2
Identities = 19/58 (32%), Positives = 29/58 (49%), Gaps = 7/58 (12%)
Frame = +1
Query: 217 LDGVLPKQPQAKKRHPHYDN-DGDSLH------EDLPKNHQAERGQPRYDDDDDLPDG 267
L+ LP +P ++ D + +LH E+ K QA+ Q YD+DDD+P G
Sbjct: 118 LEAALPAKPSSQLTDMELDECEETTLHDVNMEEENRRKEQQAQ--QEAYDEDDDMPGG 285
>AV408141
Length = 427
Score = 28.9 bits (63), Expect = 1.2
Identities = 23/82 (28%), Positives = 35/82 (42%)
Frame = +3
Query: 169 LPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAK 228
L DG+L +QQA+ RHP + +L + HQ++ R D L G Q +
Sbjct: 51 LQDGILCRQQAQGRHPSCQHRRRALRRQ-RRPHQSRSQRHGQDDFHLLRRGY---HHQRR 218
Query: 229 KRHPHYDNDGDSLHEDLPKNHQ 250
HP D + +D + Q
Sbjct: 219 CHHPQQDAGPPTRRQDARRAFQ 284
Score = 26.6 bits (57), Expect = 6.1
Identities = 23/97 (23%), Positives = 34/97 (34%), Gaps = 8/97 (8%)
Frame = +3
Query: 6 RQSAGAFTSVSQARRARQSAGAFTSVSQARRGHPRYDDDHSLDEFLADRRRKKHLALRRH 65
+Q+ G S RRA + + RR H H D+F RR H H
Sbjct: 75 QQAQGRHPSCQHRRRA---------LRRQRRPHQSRSQRHGQDDFHLLRRGYHHQRRCHH 227
Query: 66 PHYD--------DDYSLDEIFPNRRQKHQAHKRHYHY 94
P D D ++ R ++ H+R Y +
Sbjct: 228 PQQDAGPPTRRQDARRAFQVSGLRSRRRNHHRRRYRW 338
>BI420351
Length = 495
Score = 28.9 bits (63), Expect = 1.2
Identities = 28/129 (21%), Positives = 55/129 (41%), Gaps = 3/129 (2%)
Frame = +3
Query: 176 KQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYD 235
+++ +K+ ++ D + +L ++ Q + + +L P+QP +P
Sbjct: 30 RRRVRKQFQNFHGGSDDVVRNLRRSGQRFLRAPSLEADRRILTP--PEQPAGA--YPGRG 197
Query: 236 NDGDSLHEDLPKNHQAERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLP- 294
G++ H P R +P D P +LP+QRQ + P Y + L LP
Sbjct: 198 QGGEACHGRPPPLQHHHRRRPL----DPQPRHLLPRQRQPHRRVPWYPP*QGPLLHRLPH 365
Query: 295 --KNHQAKR 301
++ Q++R
Sbjct: 366 GCRHRQSQR 392
>CB828471
Length = 525
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = +1
Query: 224 QPQAKKRHPHYDNDGDSLHEDLPKNHQAERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYD 283
QPQ K++ + D D ++D K HQ + G + + + P +
Sbjct: 229 QPQTKQKQTNLDLDASKSNKDAKKEHQEDEGPRSPQQCSSSNSDNMSSLTNSSSIAPSTN 408
Query: 284 NDEDSLHE 291
+D+ S+++
Sbjct: 409 HDDMSIND 432
>BP059341
Length = 471
Score = 28.9 bits (63), Expect = 1.2
Identities = 23/65 (35%), Positives = 30/65 (45%), Gaps = 2/65 (3%)
Frame = -3
Query: 141 DDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKR--HPHYDNDEDSLHEDLP 198
DDDD EV PK+ + + DD D DG ++ KR HY L EDL
Sbjct: 373 DDDDDKAEVPPKRKRSSK------DDSDDDDGGEDDERPSKR*SWVHY------LLEDLA 230
Query: 199 KNHQA 203
NH++
Sbjct: 229 VNHRS 215
Score = 26.9 bits (58), Expect = 4.6
Identities = 15/53 (28%), Positives = 24/53 (44%)
Frame = -3
Query: 96 DEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDE 148
+E+ S + E DD+D EV PK++++ + S DD DE
Sbjct: 439 EEEEESSDFEPEENGEEEEEGDDDDDDKAEVPPKRKRSSKDDSDDDDGGEDDE 281
>BP045560
Length = 404
Score = 28.5 bits (62), Expect = 1.6
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 3/90 (3%)
Frame = -2
Query: 199 KNHQAKRGRSHYDVEDNLLD--GVLPKQPQAKKRHPHYDNDGDSLHEDLPKNHQAERGQP 256
+ + +R RS D D+ L+ ++ +A P+ ++ + HE+ P +A G+
Sbjct: 391 EEEEIRRVRSGEDWSDDKLEEEDYAKEEGEANGEGPYVGDEREE-HEEQPCRFRATHGEG 215
Query: 257 RYDDDDDLPDGV-LPKQRQAKKLHPHYDND 285
Y DDD GV L Q A YD D
Sbjct: 214 PYVGDDDKLXGVTLLSQXXAHGEGXXYDGD 125
>TC12971 similar to GB|AAN73294.1|25141199|BT002297 At5g12010/F14F18_180
{Arabidopsis thaliana;}, partial (7%)
Length = 721
Score = 28.5 bits (62), Expect = 1.6
Identities = 25/85 (29%), Positives = 40/85 (46%), Gaps = 4/85 (4%)
Frame = +3
Query: 41 YDDDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDE--D 98
Y++++S + R+R RR DDD DEI N R++ + + + +E
Sbjct: 183 YNNNNSSATSVNTRKR------RRKVKGDDDVGGDEIPSNNREEEEGDNKSKNKKEELKG 344
Query: 99 SLDS--LLPKQHQAERGHTRYDDED 121
L S LL +Q + E+ H D ED
Sbjct: 345 ILTSLLLLDEQEKVEQDHQIKDSED 419
>TC17420 similar to UP|Q9FQ74 (Q9FQ74) Biotin carboxyl carrier protein
subunit , partial (18%)
Length = 600
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +1
Query: 86 QAHKRHYHYDDEDSLDSLLPKQH 108
Q HKRH HY SL SLL KQH
Sbjct: 157 QCHKRHSHY----SLLSLLKKQH 213
>AV421856
Length = 409
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 149 VLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKRHPH 185
+L + ++RG+P +DDD DGV + K+H H
Sbjct: 1 MLERSLSSRRGNPPGEDDD---DGVTTDESKTKKHQH 102
>TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like protein, complete
Length = 1794
Score = 27.7 bits (60), Expect = 2.7
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = +1
Query: 119 DEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQ 178
DED+ + K+++ K + + ++ D L D+D D V+ K++
Sbjct: 1492 DEDTHEPSADKKKEKKEKKKKKEKNEEKDVPLLA-----------DEDGDEEKEVVKKEK 1638
Query: 179 AKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKR 230
KKR +N E +D + K+ + H + E++ +P + + KK+
Sbjct: 1639 KKKRKESTENVELQNGDD--AGEKKKKRKKHAEPEES---AEMPSKKKGKKK 1779
>BP048525
Length = 418
Score = 27.3 bits (59), Expect = 3.6
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -3
Query: 55 RRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHK 89
RRKK L +++ + DD+S+ E +R ++H++ +
Sbjct: 245 RRKKSLVDQKYSYLSDDFSVVETLLHRVKRHKSEQ 141
>TC19998 similar to UP|RED_HUMAN (Q13123) Red protein (RER protein) (IK
factor) (Cytokine IK), partial (6%)
Length = 492
Score = 27.3 bits (59), Expect = 3.6
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 49 EFLADRRRKKHLA--LRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDEDSLDSLLPK 106
E LA +RR+ +A RRH D + PNRR + + R D E + +
Sbjct: 220 EELALKRRQDQIADQRRRHQQILSDSNPPSADPNRRDRDRDRDRDRDRDRERDRERDRDR 399
Query: 107 QHQAERGHTRYDDEDSLDEVLPKQRQAKRGR 137
+ D+E+ E ++ A+R R
Sbjct: 400 DRERRNRERERDEENKARERARLEKLAERER 492
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,327,880
Number of Sequences: 28460
Number of extensions: 107128
Number of successful extensions: 485
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of query: 326
length of database: 4,897,600
effective HSP length: 91
effective length of query: 235
effective length of database: 2,307,740
effective search space: 542318900
effective search space used: 542318900
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC142222.3