BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141414.10 - phase: 0 /pseudo
(1147 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP057998 167 1e-41
BP063299 144 8e-35
TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein ... 134 1e-31
BP057316 126 2e-29
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 112 3e-25
BP074539 107 1e-23
BP054702 105 4e-23
BP056393 99 4e-21
BP063158 77 2e-14
BP067300 71 1e-12
BI418116 67 2e-11
TC12199 66 4e-11
BP065135 64 1e-10
AV777489 60 2e-09
BP084079 58 1e-08
BI417698 54 1e-07
TC11732 51 9e-07
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 51 9e-07
TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resista... 48 8e-06
AV778571 47 1e-05
>BP057998
Length = 566
Score = 167 bits (422), Expect = 1e-41
Identities = 89/184 (48%), Positives = 119/184 (64%), Gaps = 3/184 (1%)
Frame = +2
Query: 292 YVDWNNLMDIFSAGEKGSRIIVTTRDESVARSMQTSFPIYHLLPLASEDCWSLLAKHA-F 350
Y WN L F G +GS+I+VTTR + VA +QT ++L L++EDCWS+ A HA
Sbjct: 17 YDRWNQLKKPFQHGMRGSKILVTTRSDEVASVVQTG-QTFNLSQLSNEDCWSVFANHACL 193
Query: 351 GPYNCRNRSNLEFIGKEIVKKCDGLPIAAVALGGLLRSELSENRWNKVLKSNIWDLPNV- 409
P N LE IG EIVKKC GLP+AA +LGGLLR + + WN VL +IW+L
Sbjct: 194 FPGLGENTIALEKIGLEIVKKCKGLPLAAQSLGGLLRRKHNIKDWNNVLNCDIWELSESE 373
Query: 410 -KVLPALLLSYHHLPSPLKQCFTYCSIFPKNFILEKQMVVQLWIAEGFVHQSKSGKTMEE 468
K++P+L +SYH+LPS LK+CF Y S++PK++ EK V+ LW+AE + K GKT+ E
Sbjct: 374 SKIIPSLRISYHYLPSYLKRCFAYFSLYPKDYEFEKNDVILLWMAEDLLPPPKQGKTLNE 553
Query: 469 VADE 472
V DE
Sbjct: 554 VGDE 565
>BP063299
Length = 580
Score = 144 bits (363), Expect = 8e-35
Identities = 76/169 (44%), Positives = 111/169 (64%), Gaps = 1/169 (0%)
Frame = +3
Query: 311 IIVTTRDESVARSMQTSFPIYHLLPLASEDCWSLLAKHAFGPYNCRNRSNLEFIGKEIVK 370
++V+TRD VA M T L L+ DCW L ++AFG N R+ L IGKEIVK
Sbjct: 54 VLVSTRDMDVAEIMGTC-QAQRLQGLSENDCWLLFKQYAFGANN-EERAELVAIGKEIVK 227
Query: 371 KCDGLPIAAVALGGLLRSELSENRWNKVLKSNIWDLPNVK-VLPALLLSYHHLPSPLKQC 429
KC GLP+AA ALGGLLR + W++V +S +W+LP+ + +LPAL+LSY HL L+QC
Sbjct: 228 KCGGLPLAARALGGLLRLKNEVKEWHEVKESTLWNLPDERCILPALMLSYFHLTPTLRQC 407
Query: 430 FTYCSIFPKNFILEKQMVVQLWIAEGFVHQSKSGKTMEEVADEYFDELV 478
F +C+IFPK+ + K+ ++ LW+A GF+ +K+ K +E+V + + E +
Sbjct: 408 FAFCAIFPKDAKIIKEDLIYLWMANGFISSTKN-KEVEDVGNSIWKECI 551
>TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein KR4, partial
(3%)
Length = 569
Score = 134 bits (336), Expect = 1e-31
Identities = 68/88 (77%), Positives = 73/88 (82%)
Frame = +2
Query: 1060 LVSLYIYNLLDVKCLDGKWLQHLTSLENLEIAYCRKLESLPEEGLPSSLSVLTIKKCPLL 1119
LVSL I NL DVKCL G WLQHLTSLE LEI Y +LESLPEEGLPSSLSVL I CPLL
Sbjct: 2 LVSLVICNLHDVKCLGGIWLQHLTSLEKLEICYSPQLESLPEEGLPSSLSVLIIXPCPLL 181
Query: 1120 EASCKSNGGKEWPKISHIPCLIINRQVI 1147
EASC S+GGKE PKI+HIPC+II+R VI
Sbjct: 182 EASCHSHGGKECPKIAHIPCIIIHRPVI 265
>BP057316
Length = 494
Score = 126 bits (316), Expect = 2e-29
Identities = 65/164 (39%), Positives = 97/164 (58%), Gaps = 2/164 (1%)
Frame = +2
Query: 275 LRNRRFLLVLDDIWDGSYVDWNNLMDIFSAGEKGSRIIVTTRDESVARSMQTSFPIYHLL 334
L +++LLVLDD W+ SY W L G +GS+++VTTR + VA++M I+ L
Sbjct: 5 LSGKKYLLVLDDTWNESYQKWTQLRKYLMCGAQGSKVLVTTRSQIVAQTMGVQV-IHVLN 181
Query: 335 PLASEDCWSLLAKHAFGPYNCRNRSNLEFIGKEIVKKCDGLPIAAVALGGLLRSELSENR 394
L E+ W LL K F + +LE IG++I +KC G+P+A LGGLL+S+ E+
Sbjct: 182 SLTLEESWGLLKKITFEDDATQVSQSLESIGEKIAEKCRGVPLAIRTLGGLLQSKSEESE 361
Query: 395 WNKVLKSNIWDL--PNVKVLPALLLSYHHLPSPLKQCFTYCSIF 436
W VL+ + W L ++P L LSY +L ++QCF YCS++
Sbjct: 362 WMNVLQGDFWKLCEDEDSIIPVLKLSYQNLSPQIRQCFAYCSLY 493
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 112 bits (280), Expect = 3e-25
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 11/277 (3%)
Frame = +3
Query: 124 EAIYSRIHELFQRLEHFALQKDILQ--LKQGVSNSIWYGNPTSSVVVDESSICGRDDEKK 181
+ I SRI +F + F + D S + W ++++D + + G D KK
Sbjct: 42 KGINSRIRTIFNTHKRFLRKLDTASEASSSNSSGNTWNDQRGDALLLDNTDLVGIDRRKK 221
Query: 182 KLKEFLLLEDGSVSGSKIGVISIVGMGGLGKTTLAKLLFNDHEVEDNFDLKAWAYISKDF 241
KL L+ VIS+ GMGG+GKTTL K +++D V +F AW +S+
Sbjct: 222 KLMGCLIKPCPVRK-----VISVTGMGGMGKTTLVKQVYDDPVVIKHFRACAWITVSQSC 386
Query: 242 DVCRVTKVILESITFK-----PVDTNNLNI--LQVELQQSLRNRRFLLVLDDIWDGSYVD 294
++ + + + + + P+ N+ L++ ++ L+ RR+L+V DD+W +
Sbjct: 387 EIGELLRDLARQLFSEIRRPVPLGLENMRCDRLKMIIKDLLQRRRYLVVFDDVW--HVRE 560
Query: 295 WNNLMDIFSAGEKGSRIIVTTR--DESVARSMQTSFPIYHLLPLASEDCWSLLAKHAFGP 352
W + GSRI++TTR D + S ++ +Y+L PL ++ W L + F
Sbjct: 561 WEAVKYALPDNNCGSRIMITTRRSDLAFTSSTESKGKVYNLQPLKEDEAWELFCRKTFHG 740
Query: 353 YNCRNRSNLEFIGKEIVKKCDGLPIAAVALGGLLRSE 389
+C S+L I I++KC+GLP+A VA+ G+L ++
Sbjct: 741 DSC--PSHLIGICTYILRKCEGLPLAIVAISGVLATK 845
>BP074539
Length = 357
Score = 107 bits (266), Expect = 1e-23
Identities = 58/119 (48%), Positives = 78/119 (64%)
Frame = +1
Query: 610 NLIHLRYLDLSNTKIQRLPYETCKLYNLQTLLLSRCWLLIELPEDMGNLINLRHLDICGT 669
+L HL YLDLS+T I++LP TC LYNLQ L L C L ELP ++ L NLR+LD GT
Sbjct: 1 SLKHLCYLDLSHTNIEKLPDSTCLLYNLQILKLKNCRYLKELPLNLHKLTNLRYLDFSGT 180
Query: 670 NLKYMPSQIAKLQNLQTLSAFIVSKSQDGLKVGELKNFTNLQGKLSISKLQNVTDPFEA 728
++ MP KL+NLQ L++F V + + + +L NLQG LSIS+LQN+ +P +A
Sbjct: 181 QVRKMPMHFGKLKNLQVLNSFFVGQGSE-YNIQQLDEL-NLQGTLSISELQNIINPLDA 351
>BP054702
Length = 528
Score = 105 bits (262), Expect = 4e-23
Identities = 58/120 (48%), Positives = 74/120 (61%)
Frame = -3
Query: 1028 LQRLTFLTTLRIGGDDLLNALMEMNVPLLPNSLVSLYIYNLLDVKCLDGKWLQHLTSLEN 1087
L L+ L G DL+N L++ LLP SLV L +YN +K L+G LQHL+SL
Sbjct: 478 LTSLSHLYVFGFGDQDLMNTLLKER--LLPTSLVFLGLYNFSSLKFLEGNGLQHLSSLHQ 305
Query: 1088 LEIAYCRKLESLPEEGLPSSLSVLTIKKCPLLEASCKSNGGKEWPKISHIPCLIINRQVI 1147
L I C L SLPE+ LP SL+VL ++KCPLLEA + GK W K+S IP + IN +VI
Sbjct: 304 LHIDKCPSLVSLPEDQLPHSLAVLNLEKCPLLEARYRIRKGKHWSKVSRIPVIKINEEVI 125
>BP056393
Length = 421
Score = 99.0 bits (245), Expect = 4e-21
Identities = 48/118 (40%), Positives = 70/118 (58%), Gaps = 2/118 (1%)
Frame = +1
Query: 346 AKHAFGPYNCRNRSNLEFIGKEIVKKCDGLPIAAVALGGLLRSELSENRWNKVLKSNIWD 405
A HA E IG++IVK+C G P+ A +LGGLLR + N +L SNIW+
Sbjct: 67 ASHAGISLESTGNMTFETIGRQIVKRCKGSPLXAQSLGGLLRGKHDIRDXNNILNSNIWE 246
Query: 406 LP--NVKVLPALLLSYHHLPSPLKQCFTYCSIFPKNFILEKQMVVQLWIAEGFVHQSK 461
LP ++ AL +SYH+LP LK+C YCS+FPK++ + ++ LW+AE + +K
Sbjct: 247 LPENESNIILALRISYHYLPPHLKRCXVYCSLFPKDYKFDXDELILLWMAEDLLEPTK 420
>BP063158
Length = 431
Score = 77.0 bits (188), Expect = 2e-14
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = -1
Query: 1055 LLPNSLVSLYIYNLLDVKCLDGKWLQHLTSLENLEIAYCRKLESLPEEGLPSSLSVLTIK 1114
LLP+SL L I + ++K LD + L HL SL L ++ C L LPEEGLP S+S L+I+
Sbjct: 416 LLPHSLHYLDISHFPNLKKLDYRGLCHLPSLTELRLSDCSGLPCLPEEGLPKSISTLSIR 237
Query: 1115 K-CPLLEASCKSNGGKEWPKISHIPCLIINRQVI 1147
+ CPLL+ C+ G++W KISH + I+ +++
Sbjct: 236 RMCPLLKQRCQKPHGEDWGKISHSKLIFIDHELV 135
>BP067300
Length = 523
Score = 70.9 bits (172), Expect = 1e-12
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = -2
Query: 1072 KCLDGKWLQHLTSLENLEIAYCRKLESLPEEGLPSSLSVLTIKKCPLLEASCKSNGGKEW 1131
K LD LQ LTSLE L IA C KL+ +P + LP S+S L I + P LE C+ ++W
Sbjct: 522 KYLDEDSLQKLTSLETLGIACCPKLQCMPAK-LPCSISTLHIVRSPRLEERCRGRKSEDW 346
Query: 1132 PKISHIPCLIINRQVI 1147
PKI+HIP + INR+++
Sbjct: 345 PKIAHIPMIRINRKLL 298
>BI418116
Length = 584
Score = 66.6 bits (161), Expect = 2e-11
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 6/189 (3%)
Frame = +2
Query: 6 VGEAFLSASVE----VLLNKIVSNEFLNFFHSKELDVSLLKKLKITLLSLQAVLNDAEEK 61
VG+++ +E ++L K+ S+ F L L +++K T+ +++AVL DAE K
Sbjct: 8 VGDSYFETRMEAIACLILEKLSSSAIKEFGIIWNLKDDL-QRMKNTVSAIKAVLRDAEAK 184
Query: 62 QITNPAVKEWLDELTHVVFDADDLLDEINTEALRWKIEGCPQSQTIIDQVIYLYSSPFKR 121
TN WL+EL V++DADDLLD+++TE L+ ++ ++ + I+ S
Sbjct: 185 ATTNHQTSNWLEELKDVLYDADDLLDDLSTEDLKRQV--MIGNKFVRKLQIFFSKSNQIA 358
Query: 122 FPEAIYSRIHELFQRLEHFALQKDILQLK-QGVSNSIWYGNPTSSV-VVDESSICGRDDE 179
+ + + +RL A K LQL V Y + V + + GR+DE
Sbjct: 359 HGLKLGHNMKAIQKRLHDIANNKQALQLSDHPVETPTAYREQRQTYSFVSKDEVIGREDE 538
Query: 180 KKKLKEFLL 188
K L +LL
Sbjct: 539 KTLLTSYLL 565
>TC12199
Length = 551
Score = 65.9 bits (159), Expect = 4e-11
Identities = 55/181 (30%), Positives = 89/181 (48%)
Frame = +2
Query: 2 AAAFVGEAFLSASVEVLLNKIVSNEFLNFFHSKELDVSLLKKLKITLLSLQAVLNDAEEK 61
A+ + EA L E L + +V NEF KE L +KL++ ++AV+ DAE+K
Sbjct: 53 ASLKMAEALLGVVFENLAS-LVQNEFATISGIKEKAEKLSQKLQV----IKAVVEDAEKK 217
Query: 62 QITNPAVKEWLDELTHVVFDADDLLDEINTEALRWKIEGCPQSQTIIDQVIYLYSSPFKR 121
QITN ++K WL +L + DD+LDE +TE+ R + G T+I ++ +
Sbjct: 218 QITNQSIKVWLQQLKDAAYVLDDILDECSTESHR--LAGL---STLIKPKNIMFRRKIGK 382
Query: 122 FPEAIYSRIHELFQRLEHFALQKDILQLKQGVSNSIWYGNPTSSVVVDESSICGRDDEKK 181
+ I R E+ + F LQ+ G + + G T + + E + GR +EK+
Sbjct: 383 KLKEITRRFDEIAEGKNKFILQES----DGGRRDEVPEGRETWA-TIHEPELYGRQEEKE 547
Query: 182 K 182
K
Sbjct: 548 K 550
>BP065135
Length = 492
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/84 (41%), Positives = 50/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 1065 IYNLLDVKCLDGKWLQHLTSLENLEIAYCRKLESLPEEGLP-SSLSVLTIKKCPLLEASC 1123
+YN + L+GK LQ L L L I C L +LPE+ ++L+V +++KCP LEA
Sbjct: 304 LYNFSGLNLLEGKGLQLLRLLHQLHIDQCPSLVALPEDATGHTALAV*SVEKCP*LEARY 125
Query: 1124 KSNGGKEWPKISHIPCLIINRQVI 1147
+ GK W K+S IP + IN +VI
Sbjct: 124 QIGKGKHWSKVSRIPVIKINEEVI 53
>AV777489
Length = 451
Score = 60.1 bits (144), Expect = 2e-09
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Frame = +1
Query: 41 LKKLKITLLSLQAVLNDAEEKQITNPAVKEWLDELTHVVFDADDLLDEINTEALRWKIEG 100
L +L TL +++A L DAEEKQ T+ A+K WL +L DD+LDE TEAL+ + G
Sbjct: 61 LTRLSSTLTAIKATLEDAEEKQFTDRAIKVWLQKLRDAAHVLDDILDECATEALKMENGG 240
Query: 101 --CPQSQTIIDQVIYLYSSPFKRFPEAIYSRIHELFQRLEHFALQKDILQLKQGVSNSIW 158
C S + ++ + F I ++ + +RL+ A ++ L + +
Sbjct: 241 FMCGLSDKVQSSCLFSFHPKHVVFRCTIAKKMKMIRERLDEVAQERTRFHLTEMATQKRA 420
Query: 159 YGNPTSSVV 167
T+S++
Sbjct: 421 DWRQTTSII 447
>BP084079
Length = 508
Score = 57.8 bits (138), Expect = 1e-08
Identities = 53/174 (30%), Positives = 86/174 (48%)
Frame = +3
Query: 8 EAFLSASVEVLLNKIVSNEFLNFFHSKELDVSLLKKLKITLLSLQAVLNDAEEKQITNPA 67
EA L E LL+ +V NEF K +KL L ++ VL DAE+KQ+T+ A
Sbjct: 33 EALLGVVFENLLS-LVQNEFATISGIK----GKAEKLSHDLDLIKGVLEDAEKKQLTDRA 197
Query: 68 VKEWLDELTHVVFDADDLLDEINTEALRWKIEGCPQSQTIIDQVIYLYSSPFKRFPEAIY 127
V WL +L V+ DD+LDE + E+LR + ++II + + I
Sbjct: 198 VMVWLQQLKDAVYVLDDILDECSIESLRLGGLSSFKPKSII------FRREIGNRLKDIT 359
Query: 128 SRIHELFQRLEHFALQKDILQLKQGVSNSIWYGNPTSSVVVDESSICGRDDEKK 181
R E+ +R ++F L +D+ + +Q + TSS ++ + + GR D+K+
Sbjct: 360 RRFEEIAERKKNFIL-RDVDRERQA---EVAEWRETSS-IIPQPKVYGRQDDKE 506
>BI417698
Length = 519
Score = 53.9 bits (128), Expect = 1e-07
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = +2
Query: 2 AAAFVGEAFLSASVEVLLNKIVSNEFLNFFHSKELDVSLLKKLKITLLSLQAVLNDAEEK 61
A+ + +A L A + LL+ + NE K L + L++ ++AV+ DAEEK
Sbjct: 77 ASLKMADALLGAVFDKLLS-LAQNELATISGIKGKAQKLSRNLEL----IKAVVEDAEEK 241
Query: 62 QITNPAVKEWLDELTHVVFDADDLLDEINTEALR 95
QIT+ +K WL L V+ DD+LDE + E+LR
Sbjct: 242 QITDKPIKVWLQHLKDAVYVLDDILDECSIESLR 343
>TC11732
Length = 530
Score = 51.2 bits (121), Expect = 9e-07
Identities = 32/102 (31%), Positives = 56/102 (54%)
Frame = +2
Query: 582 DLLSEIRPLRVLSLSYYLNITDLPQYLGNLIHLRYLDLSNTKIQRLPYETCKLYNLQTLL 641
++L R +R L L++ I D+P + L++++ L L++ I+RLP KL +L+ +
Sbjct: 230 EILDLDRSVRTLDLTHN-RIVDIPLEISKLVNVQRLVLADNLIERLPVNLGKLQSLKLVN 406
Query: 642 LSRCWLLIELPEDMGNLINLRHLDICGTNLKYMPSQIAKLQN 683
L + LP+++G L+ L L I G L +P I L+N
Sbjct: 407 LDGN-RITSLPDELGQLVRLERLSISGNLLTSLPETIGSLRN 529
Score = 29.6 bits (65), Expect = 2.8
Identities = 17/71 (23%), Positives = 43/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 619 LSNTKIQRLPYETCKL-YNLQTLLLSRCWLLIELPEDMGNLINLRHLDICGTNLKYMPSQ 677
L ++K++ P E L +++TL L+ ++++P ++ L+N++ L + ++ +P
Sbjct: 197 LRDSKLKTFPDEILDLDRSVRTLDLTHN-RIVDIPLEISKLVNVQRLVLADNLIERLPVN 373
Query: 678 IAKLQNLQTLS 688
+ KLQ+L+ ++
Sbjct: 374 LGKLQSLKLVN 406
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 51.2 bits (121), Expect = 9e-07
Identities = 61/236 (25%), Positives = 107/236 (44%), Gaps = 8/236 (3%)
Frame = +2
Query: 212 KTTLAKLLFNDHEVEDNFDLKA-WAYISKDFDVCRVTKVILESITFKPVDTNNLNILQVE 270
KTTLA+ + D +V +F + + +S+ +V + I I N + Q
Sbjct: 2 KTTLAREVCRDDQVRCHFKERILFLTVSQSPNVEELRAKIFGHIMGNRGLNANYAVPQWM 181
Query: 271 LQQSLRNR-RFLLVLDDIWDGSYVDWNNLMDIFSAGEKGSRIIVTTRDESVARSMQTSFP 329
Q +++ + L+VLDD+W ++ L G + +V +R + Q F
Sbjct: 182 PQFECQSQSQILVVLDDVWSLPVLEQLVLR------VPGCKYLVVSRFK-----FQRIFN 328
Query: 330 IYHLLPLASE-DCWSLLAKHAFGPYNCRNRSNLEFIGKEIVKKCDGLPIAAVALGGLLRS 388
+ + L SE D SL HAFG + +N I K++V +C LP+A +G LR
Sbjct: 329 DTYDVELLSEGDALSLFCHHAFGHKSIPFGANQNLI-KQVVAECGRLPLALKVIGASLRD 505
Query: 389 ELSENRWNKVLKS-----NIWDLPNVKVLPALLLSYHHLPSPLKQCFTYCSIFPKN 439
+ +E W V +I + V ++ + +S ++LP +K+CF FP++
Sbjct: 506 Q-NEMFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAFPED 670
>TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resistance
protein-like protein MsR1, partial (5%)
Length = 766
Score = 48.1 bits (113), Expect = 8e-06
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 606 QYLGNLIHLRYLDLSN-TKIQRLPYETCKLYNLQTLLLSRCWLLIELPEDMGNLINLRHL 664
Q +G L +L L LS+ T ++ LP +L L+ L +S C L LPE++GNL NL+ L
Sbjct: 1 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 180
Query: 665 DICGTNLKYMPSQIAKLQNL 684
+ +PS I LQNL
Sbjct: 181 YMTSCAGCELPSSIVNLQNL 240
Score = 35.0 bits (79), Expect = 0.068
Identities = 19/60 (31%), Positives = 33/60 (54%)
Frame = +1
Query: 578 KVLHDLLSEIRPLRVLSLSYYLNITDLPQYLGNLIHLRYLDLSNTKIQRLPYETCKLYNL 637
K L D + + LR+L +S +++ LP+ +GNL +L+ L +++ LP L NL
Sbjct: 61 KGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSCAGCELPSSIVNLQNL 240
>AV778571
Length = 452
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 584 LSEIRPLRVLSLSYYLNITDLPQYLGNLIHLRYLDLSNT-KIQRLPYETCKLYNLQTLLL 642
LS + L LS Y N+ + + +G L LR LD+ KI+ P KL +L+ L L
Sbjct: 72 LSGLPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFP--PMKLASLEELYL 245
Query: 643 SRCWLLIELPEDMGNLINLRHLDICGTNLKYMPSQIAKLQNLQTL 687
S C L PE + + N+ + + T +K +PS I L L+ L
Sbjct: 246 SHCSSLESFPEILAKMENITLIGVYHTPIKELPSSIGNLTRLRRL 380
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,141,167
Number of Sequences: 28460
Number of extensions: 344546
Number of successful extensions: 1870
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of query: 1147
length of database: 4,897,600
effective HSP length: 100
effective length of query: 1047
effective length of database: 2,051,600
effective search space: 2148025200
effective search space used: 2148025200
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC141414.10