TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141114.7 + phase: 0 
         (246 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW164055                                                               29  0.85
TC7878 homologue to UP|Q9M1K4 (Q9M1K4) Leucine zipper-containing...    28  1.1
AV422565                                                               27  2.5
TC17815 similar to UP|PE21_ARATH (Q42580) Peroxidase 21 precurso...    26  5.5
TC16579 weakly similar to UP|AAR82740 (AAR82740) SD09672p (Fragm...    26  7.2
TC9024 similar to UP|Q9XE35 (Q9XE35) ESTD24835(R2634) correspond...    26  7.2
TC14537                                                                25  9.4
TC13577 similar to UP|Q7VK23 (Q7VK23) Alpha-1,2-fucosyltransfera...    25  9.4

>AW164055 
          Length = 361

 Score = 28.9 bits (63), Expect = 0.85
 Identities = 15/40 (37%), Positives = 22/40 (54%)
 Frame = +2

Query: 25  MSKIISQLQSSLVQSNTCGFLSDNCVHLTVQAEQLDLLDK 64
           M +I+  L   L   NT    S+NC+HL+V   +L+L  K
Sbjct: 236 MLEILFPLYMMLKSKNTWSIESENCLHLSVYQYKLNLNQK 355


>TC7878 homologue to UP|Q9M1K4 (Q9M1K4) Leucine zipper-containing protein
            AT103, partial (90%)
          Length = 1496

 Score = 28.5 bits (62), Expect = 1.1
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 153  DLIVYRHHPARVHSEYGVLVLSHDKDGDLNGRLRVWSDVH 192
            +L+VY HHP +   E GVL + + ++      + + +D+H
Sbjct: 1082 NLLVYLHHPVKPSLELGVLNIKNSRENPSRCAVCLNNDMH 963


>AV422565 
          Length = 470

 Score = 27.3 bits (59), Expect = 2.5
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
 Frame = +1

Query: 116 LWHY------FRSKKETFPYFYKAYSHLRMKNW--------VVRSGAQYGVDLIVYRHHP 161
           +WH       F ++   F + + A+ H+    W        ++  G QYG  L ++ H P
Sbjct: 268 IWHLI**NVSF*TRP*MFCFMWTAWMHIEWTTWTS*LLRL*LIVLGKQYGTGL*LHSHMP 447

Query: 162 ARVH 165
           + +H
Sbjct: 448 SSLH 459


>TC17815 similar to UP|PE21_ARATH (Q42580) Peroxidase 21 precursor  (Atperox
           P21) (PRXR5) (ATP2a/ATP2b) , partial (18%)
          Length = 397

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 12/39 (30%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
 Frame = -1

Query: 107 DTGPLNDEELWHYFRSKKETFPYFYKAYSH---LRMKNW 142
           D G      LW YF++K++    +  A++H   L + NW
Sbjct: 298 DRGERRSYSLWKYFKTKRKFKHAYMHAFAHQNGLLLFNW 182


>TC16579 weakly similar to UP|AAR82740 (AAR82740) SD09672p (Fragment),
           partial (5%)
          Length = 705

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +3

Query: 17  EAEALKEPMSKIISQLQSSLVQSNTCGFLSDNCVHLTVQ 55
           +A+++   +SK+   L+ +L+ ++T    +D C  +TVQ
Sbjct: 390 DAKSIYPNLSKLALALEKNLLVTSTLAISTDPCPQVTVQ 506


>TC9024 similar to UP|Q9XE35 (Q9XE35) ESTD24835(R2634) corresponds to a
          region of the predicted gene, partial (8%)
          Length = 588

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 10/18 (55%), Positives = 13/18 (71%)
 Frame = -1

Query: 78 MYWFQLTVEEAFYLCYSL 95
          ++W QL +EE FYL  SL
Sbjct: 90 LWWIQLHIEEPFYLLGSL 37


>TC14537 
          Length = 669

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 15/43 (34%), Positives = 22/43 (50%), Gaps = 2/43 (4%)
 Frame = +1

Query: 11 KSKKEAEAEALK--EPMSKIISQLQSSLVQSNTCGFLSDNCVH 51
          +S+KE    A+   EP++ +I+   S L    TC  L   CVH
Sbjct: 49 RSQKEHVVAAVWSFEPLTSLITSSCSYLNGKQTCQILCGGCVH 177


>TC13577 similar to UP|Q7VK23 (Q7VK23) Alpha-1,2-fucosyltransferase, partial
           (8%)
          Length = 573

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 219 SLLCLTNYTVEERTISRWSPEQCRERSI 246
           +LL  TN+ +++ T+ RWS  Q    SI
Sbjct: 223 ALLFFTNFNLQQHTVHRWSGWQTFVSSI 140


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,022,513
Number of Sequences: 28460
Number of extensions: 71058
Number of successful extensions: 332
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of query: 246
length of database: 4,897,600
effective HSP length: 88
effective length of query: 158
effective length of database: 2,393,120
effective search space: 378112960
effective search space used: 378112960
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)