Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140915.5 - phase: 0 
         (598 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8778 similar to UP|O22512 (O22512) Grr1, partial (31%)               64  9e-11
TC18773 similar to PIR|T48087|T48087 transport inhibitor respons...    54  6e-08
TC18452 weakly similar to GB|AAO64875.1|29028992|BT005940 At5g27...    53  1e-07
TC10215 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respon...    48  5e-06
TC14746 weakly similar to GB|AAG21976.1|10716947|AF263377 SKP1 i...    47  7e-06
TC15634 similar to UP|Q8LGK0 (Q8LGK0) F-box protein family, AtFB...    46  2e-05
BP072112                                                               41  6e-04
TC16915 weakly similar to UP|Q9SDA8 (Q9SDA8) AT2G17020 protein (...    35  0.035
AI967901                                                               33  0.13
AV413122                                                               32  0.29
TC12475 weakly similar to UP|O22512 (O22512) Grr1, partial (23%)       32  0.38
BP032005                                                               31  0.66
TC15760 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respon...    30  0.86
TC20082 weakly similar to UP|AAR27072 (AAR27072) EIN3-binding F-...    30  0.86
BP085336                                                               29  1.9
AV780688                                                               28  4.2
TC15378 similar to UP|Q941I4 (Q941I4) Vacuolar acid invertase, p...    28  4.2
TC17293 similar to GB|CAD35362.1|21535744|ATH490171 FK506 bindin...    28  4.2
BP057048                                                               28  4.2
TC15283 similar to UP|AAR82925 (AAR82925) Coronatine-insensitive...    28  5.5

>TC8778 similar to UP|O22512 (O22512) Grr1, partial (31%)
          Length = 877

 Score = 63.5 bits (153), Expect = 9e-11
 Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 15/247 (6%)
 Frame = +3

Query: 344 LQYTDFLNDHCVAELSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQG 403
           LQ   FL+D+ +   +     + SL L  C  +T   FF L+ NC +  ++ ++  +  G
Sbjct: 21  LQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKV-LSLASCYG 197

Query: 404 TTIPNSLMDRLVN-PQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIR 462
               N  +  ++     +SL +       D  I +   L P L+ + L+    IT+ G  
Sbjct: 198 IKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFL 377

Query: 463 PLLES------------CRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTE-VDDEALY 509
           PLLES            C K+   +   LSL  L        LEVLNL   + + D +L 
Sbjct: 378 PLLESSGAGLVNVNLSGCTKLT--DQVVLSLVKLHGC----SLEVLNLNGCKKISDASLI 539

Query: 510 IISNRCPALLQLVLLRCDYITDKGVMHVVN-NCTQLREINLDGCPNVQAKVVASMVVSRP 568
            I+  CP L  L + RC  ITD G+  + +     L+ ++L GC +V  K V ++     
Sbjct: 540 AIAGSCPLLSDLDVSRCG-ITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGS 716

Query: 569 SLRKIHV 575
           SL  +++
Sbjct: 717 SLDGLNI 737



 Score = 37.7 bits (86), Expect = 0.005
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
 Frame = +3

Query: 313 LRRLVLSYCPGYTYSGISFLLSKSKR-IQHLDLQYTDFLNDHCVAELSLFLGDLLS-LNL 370
           L  + L+   G T +G   LL  S   + +++L     L D  V  L    G  L  LNL
Sbjct: 324 LEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNL 503

Query: 371 GNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNPQFKSLFLASAACL 430
             C+ ++ ++  A+  +CP L++++++R  I  T I      + +N   K L LA    +
Sbjct: 504 NGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLN--LKVLSLAGCTSV 677

Query: 431 EDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLE 466
            ++ +     L  +L  L++     I+   +  L++
Sbjct: 678 SNKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQ 785


>TC18773 similar to PIR|T48087|T48087 transport inhibitor response protein
           TIR1 [imported] -                Arabidopsis thaliana
           {Arabidopsis thaliana;}, partial (50%)
          Length = 927

 Score = 54.3 bits (129), Expect = 6e-08
 Identities = 69/301 (22%), Positives = 130/301 (42%), Gaps = 25/301 (8%)
 Frame = +3

Query: 300 DQFLSSIAMESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAELS 359
           D  L  IA      R LVL  C G+T  G++ + +  + ++ LDL+ ++ + D C   LS
Sbjct: 42  DDXLDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESE-VEDICGHWLS 218

Query: 360 LFLGDLLSLNLGNCRLLT----VSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLV 415
            F     SL   N   L+    +     L++ CP+L  + +NR       +P   +DRL 
Sbjct: 219 HFPDSYNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNR------AVP---LDRLT 371

Query: 416 N-----PQFKSLFL-ASAACLEDQNIIMFAALFPNLQQLH-LSCSYNITEEGIRPLLESC 468
           N     PQ   L   A  A +  + +      F   +QL  LS  +++    +  +   C
Sbjct: 372 NLLRGAPQLVELGTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVC 551

Query: 469 RKIRHLNLTCLSLKS------LGTNFDLPDLEVLNLTNTEVDDEALYIISNRCPALLQLV 522
             +  LNL+  +++S      +     L  L VL+     ++D  L +++  C  L +L 
Sbjct: 552 SGLTSLNLSYATIQSPDHIKLVSQCGSLQRLWVLDY----IEDAGLDVLAASCKDLRELR 719

Query: 523 LLRCD--------YITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKIH 574
           +   D         +T++G++ V   C +L+ + L  C  +    + ++  +RP++ +  
Sbjct: 720 VFPSDPFGLEPNVALTEEGLISVSEGCPKLQSV-LYFCRQMSNAALNTIAQNRPNMTRFR 896

Query: 575 V 575
           +
Sbjct: 897 L 899


>TC18452 weakly similar to GB|AAO64875.1|29028992|BT005940 At5g27920
           {Arabidopsis thaliana;}, partial (11%)
          Length = 698

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
 Frame = +2

Query: 493 LEVLNLTNTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGC 552
           LE L++T+ EVDDE L  ISN C  L  L +  C  ITD+GV ++   C++L+E++L   
Sbjct: 74  LEELDITDNEVDDEGLKSISN-CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRS 250

Query: 553 PNVQAKVVASMVVSRPSLRKIHVPPNFPLSD---------RNRKLFSRHGCLLV 597
             +    ++++    P L  I+      ++D         RN K     GCLLV
Sbjct: 251 TGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLV 412



 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = +2

Query: 445 LQQLHLSCSYNITEEGIRPLLESCRKIRHLNL------TCLSLKSLGTNFDLPDLEVLNL 498
           L  L +    NIT+ G+  +   C K++ L+L      T L + ++      P LE++N 
Sbjct: 146 LSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACG--CPGLEIINT 319

Query: 499 TN-TEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQA 557
           +  T + D +L  +S +C  L  L +  C  +T  G+  +  NC QL  +++  C N+  
Sbjct: 320 SYCTNITDGSLISLS-KCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDD 496

Query: 558 KVVASMVVSRPSLRKIHV 575
             +  +     SLR+I++
Sbjct: 497 SGMIPLAYFSKSLRQINL 550



 Score = 28.9 bits (63), Expect = 2.5
 Identities = 43/168 (25%), Positives = 66/168 (38%)
 Frame = +2

Query: 94  LTSLDLSYYYGDLDALLTQISSFPMLKLTSLNLSNQLILPANGLRAFSQNITTLTSLICS 153
           L  ++ SY     D  L  +S    LK  +L +   L++ + GL + + N        C 
Sbjct: 302 LEIINTSYCTNITDGSLISLSKCRNLK--TLEIRGCLLVTSIGLASIAMN--------CK 451

Query: 154 NLISLNSTDIHLIADTFPLLEELDLAYPSKIINHTHATFSTGLEALSLALIKLRKVNLSY 213
            LI ++    + I D+      + LAY SK                      LR++NLSY
Sbjct: 452 QLICVDIKKCYNIDDS----GMIPLAYFSK---------------------SLRQINLSY 556

Query: 214 HGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQKPTLTSL 261
               +  LLS    +C  LQ   +L  + L   G+  ALL    LT +
Sbjct: 557 SSVTDVGLLSLASISC--LQSFTILHLQGLAPGGLAAALLACRGLTKV 694


>TC10215 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
           protein, partial (43%)
          Length = 837

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
 Frame = +3

Query: 287 GLTSLLLTGFRISDQFLSSIAMESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQY 346
           GL  L L    +SD+ L  ++   +  + LVL  C G+T  G++ + +  + ++ LDLQ 
Sbjct: 51  GLEELRLKRMVVSDESLELLSRSFVNFKSLVLVSCEGFTTDGLAAVAANCRFLRELDLQE 230

Query: 347 TDFLNDHCVAELSLF---LGDLLSLNLGNCR-LLTVSTFFALITNCPSLTEINMNRT--- 399
            + + D     LS F      L+SLN    +  + +     L+   P+L  + +NR+   
Sbjct: 231 NE-VEDQKGQWLSCFPDSCTSLVSLNFACLKGDVNLGALERLVARSPNLKSLRLNRSVPI 407

Query: 400 -NIQ--------------GTTIPNSLMD---RLVNPQFKSLFLASAACLEDQNIIMFAAL 441
             +Q              G+ + N   D   +L N   KS  + S +   +       A+
Sbjct: 408 EALQRILMQAPQLADLGIGSFVHNPFSDAFSKLKNTILKSKSITSLSGFLEVGPFCLPAM 587

Query: 442 FP---NLQQLHLSCSYNITEEGIRPLLESCRKIRHL-NLTCLSLKSLG 485
           +P   NL  L+LS +  I    +  L+  C K++ L  + C+  K LG
Sbjct: 588 YPICRNLTALNLSYAAGIHGNELIKLIYHCGKLQRLWIMDCIGDKGLG 731



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +3

Query: 493 LEVLNLTNTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINL 549
           LE L L    V DE+L ++S        LVL+ C+  T  G+  V  NC  LRE++L
Sbjct: 54  LEELRLKRMVVSDESLELLSRSFVNFKSLVLVSCEGFTTDGLAAVAANCRFLRELDL 224


>TC14746 weakly similar to GB|AAG21976.1|10716947|AF263377 SKP1 interacting
           partner 1 {Arabidopsis thaliana;}, partial (62%)
          Length = 719

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 21/67 (31%), Positives = 40/67 (59%)
 Frame = +3

Query: 505 DEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMV 564
           D +L +++ RCP L  L +  C ++TD  +  +  NC +LRE+++  C +V  K +A + 
Sbjct: 384 DRSLALVAERCPNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIG 563

Query: 565 VSRPSLR 571
            + P+L+
Sbjct: 564 RNCPNLK 584



 Score = 33.9 bits (76), Expect = 0.077
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +3

Query: 491 PDLEVLNLTNT-EVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLR 545
           P+LEVL++ +   V D+++  I+  CP L +L +  C  +T K +  +  NC  L+
Sbjct: 417 PNLEVLSIRSCPHVTDDSISRIAVNCPKLRELDISYCYDVTHKSLALIGRNCPNLK 584


>TC15634 similar to UP|Q8LGK0 (Q8LGK0) F-box protein family, AtFBL4, partial
           (13%)
          Length = 613

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 20/61 (32%), Positives = 37/61 (59%)
 Frame = +1

Query: 515 CPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKIH 574
           CP + ++V+  C  ITD G+ H+V +CT L   ++  C  + +  VA++V S  +++K+ 
Sbjct: 1   CPLIREIVISHCRQITDVGLAHLVKSCTMLESCHMVYCSGITSAGVATVVSSCLNIKKVL 180

Query: 575 V 575
           V
Sbjct: 181 V 183



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 13/43 (30%), Positives = 25/43 (57%)
 Frame = +1

Query: 206 LRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGV 248
           +R++ +S+   +    L+HL K+C  L+   ++ C  +T AGV
Sbjct: 10  IREIVISHCRQITDVGLAHLVKSCTMLESCHMVYCSGITSAGV 138


>BP072112 
          Length = 545

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -1

Query: 493 LEVLNLTNT--EVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLD 550
           L+V+NL        D AL  +   C  L  L L  CD + D GVM +   C  LR I+L 
Sbjct: 227 LKVMNLCGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLC 48

Query: 551 GCPNVQAKV 559
           GC  +   V
Sbjct: 47  GCIRITMTV 21



 Score = 30.4 bits (67), Expect = 0.86
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 508 LYIISNRCPALLQLVLLRC-DYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVS 566
           L  +++ C  L  + L  C    +D  +  V   C QL+ +NL  C NV    V S+   
Sbjct: 257 LAYLASFCRRLKVMNLCGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYG 78

Query: 567 RPSLRKI 573
            P LR I
Sbjct: 77  CPDLRSI 57


>TC16915 weakly similar to UP|Q9SDA8 (Q9SDA8) AT2G17020 protein
           (At2g17020/At2g17020), partial (29%)
          Length = 1011

 Score = 35.0 bits (79), Expect = 0.035
 Identities = 27/91 (29%), Positives = 47/91 (50%), Gaps = 3/91 (3%)
 Frame = +3

Query: 480 SLKSLGTNFDLPDLEVLNLTNTEVDDEALYIIS-NRCPALLQLVLLRCDYITDKGVMHVV 538
           +L+++GT   L  L+VL L  +++ D  L  +  +   +L  L L  C  +TDK +  + 
Sbjct: 99  ALQAIGT---LTKLKVLLLDGSDITDAGLSCLRPSVINSLYALSLRGCKRLTDKCIAVLF 269

Query: 539 NNC--TQLREINLDGCPNVQAKVVASMVVSR 567
           + C   +LRE++L   PN+    V  +  SR
Sbjct: 270 HGCGMLELRELDLSNLPNLSDNGVLMLAKSR 362


>AI967901 
          Length = 266

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +1

Query: 492 DLEVLNLTNTEV-DDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNN-CTQLREINL 549
           DL  LN++      D AL  +++ C  L  L L  C        +H V   C QL+ +NL
Sbjct: 43  DLIKLNISGCSAFSDNALAYLASFCRRLKVLNLCGCVQAASDTALHAVGQYCNQLQSLNL 222

Query: 550 DGCPNV 555
             C NV
Sbjct: 223 GWCDNV 240


>AV413122 
          Length = 399

 Score = 32.0 bits (71), Expect = 0.29
 Identities = 19/78 (24%), Positives = 35/78 (44%)
 Frame = +2

Query: 444 NLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEV 503
           +L++L L+C Y+I++EG+  + +                        P LE L+++ + +
Sbjct: 185 HLRRLRLACCYSISDEGLSEIAKK----------------------FPQLEELDISISSL 298

Query: 504 DDEALYIISNRCPALLQL 521
             E L +I   CP L  L
Sbjct: 299 SKEPLEVIGRSCPRLKTL 352


>TC12475 weakly similar to UP|O22512 (O22512) Grr1, partial (23%)
          Length = 501

 Score = 31.6 bits (70), Expect = 0.38
 Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
 Frame = +2

Query: 362 LGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNPQFKS 421
           L  L SL + +CR +T     A+   CP+L  +++++                       
Sbjct: 86  LHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHK----------------------- 196

Query: 422 LFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESC-RKIRHLNL-TCL 479
                 A L D  +I F     +L+ L L   + IT+ G   +L +C  K++ +++ +C 
Sbjct: 197 -----CAFLSDNGLISFTKAASSLENLQLEECHRITQFGFFGVLFNCGAKLKAISMVSCY 361

Query: 480 SLKS----LGTNFDLPDLEVLNLTN-TEVDDEALYIISNRCPALLQ 520
            +K     L        L  L++ +  E  +  L ++   CP L Q
Sbjct: 362 GIKDQNLVLSPISPCESLRSLSIRHCPEFGNATLSVLGKLCPQLQQ 499



 Score = 29.3 bits (64), Expect = 1.9
 Identities = 29/139 (20%), Positives = 56/139 (39%), Gaps = 3/139 (2%)
 Frame = +2

Query: 418 QFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNL- 476
           + KSL +AS   + D  I       PNL+ +HL     +++ G+    ++   + +L L 
Sbjct: 92  KLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAASSLENLQLE 271

Query: 477 TCLSLKSLGTNFDLPDLEVLNLTNTEVDDEALYIISNRCPALLQLV-LLRCDYITDKG-V 534
            C  +   G                       + +   C A L+ + ++ C  I D+  V
Sbjct: 272 ECHRITQFG----------------------FFGVLFNCGAKLKAISMVSCYGIKDQNLV 385

Query: 535 MHVVNNCTQLREINLDGCP 553
           +  ++ C  LR +++  CP
Sbjct: 386 LSPISPCESLRSLSIRHCP 442


>BP032005 
          Length = 449

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 16/53 (30%), Positives = 25/53 (46%)
 Frame = -2

Query: 515 CPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSR 567
           CPAL +L L +C      G   V + C   RE+ L  C  +   V++  ++ R
Sbjct: 439 CPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICR 281


>TC15760 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
           protein, partial (17%)
          Length = 664

 Score = 30.4 bits (67), Expect = 0.86
 Identities = 10/24 (41%), Positives = 18/24 (74%)
 Frame = +2

Query: 530 TDKGVMHVVNNCTQLREINLDGCP 553
           +DKG+ +V+N C +LR++ +  CP
Sbjct: 77  SDKGMQYVLNGCKKLRKLEIRECP 148


>TC20082 weakly similar to UP|AAR27072 (AAR27072) EIN3-binding F-box protein
           2, partial (9%)
          Length = 630

 Score = 30.4 bits (67), Expect = 0.86
 Identities = 28/119 (23%), Positives = 54/119 (44%), Gaps = 1/119 (0%)
 Frame = +3

Query: 350 LNDHCVAELSLFLGDLLSL-NLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPN 408
           L D+ V+ L+   G  L L NL  C  +T ++  A+  NC  L ++++++  I  T    
Sbjct: 24  LTDNVVSTLARLHGGTLELLNLDGCWRITDASLVAIADNCLLLNDLDVSKCAI--TDAGL 197

Query: 409 SLMDRLVNPQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLES 467
           +++        + L L+    L ++++     L   L  L+L    +I    I  L+E+
Sbjct: 198 AVLSGAGQLSLQVLSLSGCCDLSNKSVAFLTKLGQTLLGLNLQHCSSIGSSTIELLVEN 374


>BP085336 
          Length = 369

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 14/42 (33%), Positives = 27/42 (63%), Gaps = 1/42 (2%)
 Frame = -2

Query: 444 NLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLT-CLSLKSL 484
           NL++LH++  +N+++ G+  L + CR +  L L+ C  L S+
Sbjct: 323 NLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSI 198



 Score = 28.5 bits (62), Expect = 3.3
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -2

Query: 515 CPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSL 570
           C  L +L + RC  ++D G++ + + C  L  + L GC  + +  +      RP +
Sbjct: 329 CRNLKRLHVNRCHNLSDGGLLALQDGCRSLTILYLSGCSRLTSIALELFKSHRPDV 162


>AV780688 
          Length = 459

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 24/67 (35%), Positives = 34/67 (49%)
 Frame = +3

Query: 19 NSSSSSELDLPDDIWERVFRLLKNNDDDDHRKRYLKSLSVASKHFLSVTNRHKFCLTILY 78
          NSSS+++L    +  ER+ R  KN    +HRK+  +S S+AS  F         C+TI  
Sbjct: 12 NSSSNNDLIPKIETNERM-RTKKNLQYPNHRKKIHRSFSLASSLF-----SPDHCVTIAI 173

Query: 79 PALPVLP 85
              VLP
Sbjct: 174HTDTVLP 194


>TC15378 similar to UP|Q941I4 (Q941I4) Vacuolar acid invertase, partial
           (21%)
          Length = 845

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 31/102 (30%), Positives = 45/102 (43%), Gaps = 12/102 (11%)
 Frame = -3

Query: 228 NCKFLQEVILLRCEQLTIAGVDLALLQKPTLTSLSITCTVTTGL---------EHLTSHF 278
           NC+ L+E ++     + +A ++   L  P + S+  T    T L         E  T+  
Sbjct: 354 NCQILREALMF----MPVALLNRNNLAAPYIASVG*TLPEITVLPS*AKLSMIEWSTNTL 187

Query: 279 IDSLLSLKGLTSLLLTGF---RISDQFLSSIAMESLPLRRLV 317
           IDS  SLK  T L  TGF     SD  +SS   + +   RLV
Sbjct: 186 IDSFSSLKTGTWLP*TGFATSEASDDLVSSTQKKVVEFPRLV 61


>TC17293 similar to GB|CAD35362.1|21535744|ATH490171 FK506 binding protein 1
           {Arabidopsis thaliana;} , partial (21%)
          Length = 575

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 10/27 (37%), Positives = 21/27 (77%)
 Frame = -2

Query: 202 ALIKLRKVNLSYHGYLNGTLLSHLFKN 228
           +++K+++ NL+ HG++N TLL++   N
Sbjct: 208 SILKIKESNLAAHGFVNHTLLTNSTSN 128


>BP057048 
          Length = 404

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 15/56 (26%), Positives = 31/56 (54%)
 Frame = -2

Query: 14  CSQQLNSSSSSELDLPDDIWERVFRLLKNNDDDDHRKRYLKSLSVASKHFLSVTNR 69
           C++QL ++++    +    +E  FRL K + +    K  L++   ++ HFLS T++
Sbjct: 379 CTRQLGNNATGGTSIIVATFELSFRLFKYDSECTTSKSSLEASRGSTMHFLSKTSK 212


>TC15283 similar to UP|AAR82925 (AAR82925) Coronatine-insensitive 1, partial
           (35%)
          Length = 948

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
 Frame = +1

Query: 458 EEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVDDEALYIISNRCPA 517
           ++G+R LL  C K+R                       L L    + D  L  I    P 
Sbjct: 190 DDGVRALLRGCDKLRRF--------------------ALYLRPGGLTDVGLGYIGQYSPN 309

Query: 518 LLQLVLLRCDYI--TDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKIHV 575
           +  ++L    Y+  TD G++     C  L+++ + GC       +A       SLR + V
Sbjct: 310 VRWMLL---GYVGETDAGLLEFSKGCPSLQKLEIRGCSFFSEYALAIAATRLKSLRYLWV 480


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.323    0.138    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,203,550
Number of Sequences: 28460
Number of extensions: 166629
Number of successful extensions: 878
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of query: 598
length of database: 4,897,600
effective HSP length: 95
effective length of query: 503
effective length of database: 2,193,900
effective search space: 1103531700
effective search space used: 1103531700
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)


Medicago: description of AC140915.5