BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140550.8 + phase: 0 /pseudo
(496 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP085686 80 8e-16
AU089074 65 3e-11
BP075076 50 1e-06
BU494405 46 1e-05
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 40 0.001
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 39 0.003
TC11308 similar to UP|CENB_HUMAN (P07199) Major centromere autoa... 38 0.004
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 37 0.006
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 37 0.007
BP034655 37 0.010
AV416122 37 0.010
BP054131 36 0.013
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 36 0.016
TC9596 similar to UP|AAR24722 (AAR24722) At5g49400, partial (66%) 35 0.037
BP056955 35 0.037
TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial ... 34 0.048
TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) prec... 34 0.063
BF177554 34 0.063
BP085186 34 0.063
BP036242 33 0.082
>BP085686
Length = 432
Score = 80.1 bits (196), Expect = 8e-16
Identities = 36/43 (83%), Positives = 38/43 (87%)
Frame = -2
Query: 454 KEPQDKHQKAKLLESLCSENPMLSSLCGTLFPKNSQSVWSGPH 496
++ QDKHQKAKLLESLC ENP LSSLCG LFP NSQSVWSGPH
Sbjct: 425 QDSQDKHQKAKLLESLCVENPKLSSLCGILFPNNSQSVWSGPH 297
>AU089074
Length = 244
Score = 64.7 bits (156), Expect = 3e-11
Identities = 32/77 (41%), Positives = 47/77 (60%)
Frame = +1
Query: 200 LMIIRKVMKMDAAEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKNDKYMNSEDVY 259
+ +++K+MK FNVPV+ +G+ DY++II PMD GT+ +NL KN Y E+
Sbjct: 7 VQVLQKLMKHKHGWIFNVPVDAVGMGLHDYYEIIKKPMDLGTVKANLSKN-VYATPEEFA 183
Query: 260 NDVRYIWENCYKYNNKG 276
+DVR + N YN KG
Sbjct: 184 SDVRLTFNNALTYNPKG 234
>BP075076
Length = 527
Score = 49.7 bits (117), Expect = 1e-06
Identities = 23/48 (47%), Positives = 30/48 (61%)
Frame = -1
Query: 202 IIRKVMKMDAAEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKN 249
++ K+MK FN PV+ E LG+ DYF II PMD GT+ + L KN
Sbjct: 233 LLEKLMKHSLGWVFNTPVDVEGLGLHDYFTIITHPMDLGTVKTRLNKN 90
>BU494405
Length = 563
Score = 46.2 bits (108), Expect = 1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 210 DAAEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKNDKYMNSEDVYNDVRYIWENC 269
D + F PV+ + PDYFDII+ PMD I + +N +Y + ED +D+ I N
Sbjct: 247 DLSYLFQKPVSKKEA--PDYFDIIERPMDLSRIRERV-RNMEYKSREDFRHDIWQITYNA 417
Query: 270 YKYNN 274
+KYNN
Sbjct: 418 HKYNN 432
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = -2
Query: 323 GEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPE 382
GE+ LS+ D G+ ++K K + +E D+DG ++E+ +
Sbjct: 554 GEEDLSSEDG--AGYGNNSNNKSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDDD 381
Query: 383 DVEEDEEEDGEGENEEE 399
D ++DEE+DG GE+EEE
Sbjct: 380 DEDDDEEDDG-GEDEEE 333
Score = 37.7 bits (86), Expect = 0.004
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = -2
Query: 302 EQPKGSTDFKQEESMLVESPG---GEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCS 358
E G F + E L G G +S + ++ +G G E E
Sbjct: 587 EDDDGDGPFGEGEEDLSSEDGAGYGNNSNNKSNSKKAPEGGPGAGAGPEENGEDEEDE-- 414
Query: 359 PSDGRHEVNEVDDD-GMEEENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDETLRHGG 417
DG + ++ DDD +EE+ G ED EE+ E+ + E+EEE E + + + +
Sbjct: 413 --DGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEALQPPKKRKK*T 240
Query: 418 TLAEES 423
TLAE S
Sbjct: 239 TLAESS 222
Score = 29.3 bits (64), Expect = 1.5
Identities = 40/146 (27%), Positives = 57/146 (38%), Gaps = 14/146 (9%)
Frame = -2
Query: 305 KGSTDFKQEESMLVESPGGEDSLSNTDELLGTDGDVDDDK----GEVTKMETSE------ 354
KG T + E+ GED N DE GD DDD GE + +SE
Sbjct: 665 KGETKSQSEDKQ--HDAEGEDG--NDDE-----GDEDDDGDGPFGEGEEDLSSEDGAGYG 513
Query: 355 ---KNCSPSDGRHEVNEVDDDGMEEENHGPEDVE-EDEEEDGEGENEEEIEMNRVKRRMD 410
N S S E G EE ED + ED+E+D + + +++ E + + +
Sbjct: 512 NNSNNKSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEE 333
Query: 411 ETLRHGGTLAEESEVGDTAALHDEYK 436
E + EE + D AL K
Sbjct: 332 EGVEEEDNEDEEEDEEDEEALQPPKK 255
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 38.5 bits (88), Expect = 0.003
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Frame = +3
Query: 316 MLVESPGGEDSLSNTDEL-LGTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGM 374
M++ G + L ++L G + + +D++ E E+ P+ GR V ++
Sbjct: 273 MMMRGGGRKKKLKLVEKLNQGVEEEEEDEEDE------EEQTPHPTRGRSRVEHAQEEDE 434
Query: 375 EEENHGPEDVEED--------EEEDGEGENEEEIEMNRVK-RRMDETLRHGGT 418
EEEN E+ EE+ E++ E E EE + + VK R++D H G+
Sbjct: 435 EEENGEEEEEEEEVVVEDEQGNEDEDEDEEEEGVVVVEVKGRKVDSKGLHSGS 593
>TC11308 similar to UP|CENB_HUMAN (P07199) Major centromere autoantigen B
(Centromere protein B) (CENP-B), partial (4%)
Length = 756
Score = 37.7 bits (86), Expect = 0.004
Identities = 24/71 (33%), Positives = 37/71 (51%), Gaps = 6/71 (8%)
Frame = -2
Query: 340 VDDDKGEVTKMETSEKNCSPSDGR------HEVNEVDDDGMEEENHGPEDVEEDEEEDGE 393
+ DD E T ++ E+N G HE+ E D++G EEE E E++EEED E
Sbjct: 416 IGDDGAETTSVDPVEENARAEPGDEDGSRFHEI-ENDNEG-EEEVEAEEGEEDEEEEDDE 243
Query: 394 GENEEEIEMNR 404
E+ E+ + +
Sbjct: 242 DEDPGEVSIGQ 210
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 37.4 bits (85), Expect = 0.006
Identities = 33/123 (26%), Positives = 56/123 (44%), Gaps = 8/123 (6%)
Frame = +2
Query: 341 DDDKGEVTKMETSEKNCSPSDGRHEVNEVDDD---GMEEENHG---PEDVEEDEEEDGEG 394
DDD GE + + + +P G + +E D++ G+E G P+D ++D+++D E
Sbjct: 35 DDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEEEGGVEGGRGGGGDPDDDDDDDDDDDEE 214
Query: 395 ENEEEIEMNRVKRRMDETLRHGGTLAEESEV-GDTAALHDE-YKNTQQEGQAAVVQQQKK 452
E EEE + +R AE+ E D DE N +G+ A V ++K
Sbjct: 215 EEEEE------DLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDNDDGEKAGVPSKRK 376
Query: 453 HKE 455
+
Sbjct: 377 RSD 385
Score = 29.3 bits (64), Expect = 1.5
Identities = 24/93 (25%), Positives = 36/93 (37%), Gaps = 12/93 (12%)
Frame = +2
Query: 319 ESPGGEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEEN 378
+ G +D D+ G DDD E + E + G + ++ DDD +EE
Sbjct: 38 DDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEEEGGVEGGRGGGGDPDDDDDDDDDDDEEE 217
Query: 379 HGPEDV------------EEDEEEDGEGENEEE 399
ED+ EDEE + E EE+
Sbjct: 218 EEEEDLGTEYLVRRTVAAAEDEEASSDFEPEED 316
Score = 27.3 bits (59), Expect = 5.9
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Frame = +2
Query: 2 KRKRGHKKGRPKGNTNPVSVTLTNEQEEEEEEEEETSAFD------VGSKEDNNSGMEVD 55
+ + G +G G +P ++ ++EEEEEEE + V + ED + + +
Sbjct: 125 EEEEGGVEGGRGGGGDPDDDDDDDDDDDEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFE 304
Query: 56 TPSSTGTDQHSNLANINPDGSIRKPVGRVKVKLKTSKMLDSQPNSSDAPSQSDTDKSSQ 114
G D N N DG V K K S S + SD + D S +
Sbjct: 305 PEEDEGDD------NDNDDGE----KAGVPSKRKRSDKDGSGDDDSDDGGEDDERPSKR 451
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 365 EVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIE 401
EV E ++ +EEE E+ EE EEE+ E E EEE+E
Sbjct: 202 EVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVE 312
Score = 36.2 bits (82), Expect = 0.013
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 365 EVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDE 411
E EV+++ EE E+ EE+EEE+GE E EEE E V+ +E
Sbjct: 193 EYEEVEEEVEEEVEE--EEEEEEEEEEGEEEEEEEEEEEEVEAEAEE 327
Score = 34.7 bits (78), Expect = 0.037
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 365 EVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEE 399
EV E +++ EEE E+ EE+EEE+ E E EEE
Sbjct: 226 EVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEE 330
Score = 29.3 bits (64), Expect = 1.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 374 MEEENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDETLRHGGTLAEESEVGD 427
+E E E+VEE+ EE+ E E EEE E + +E AE E D
Sbjct: 175 LEAEVQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDD 336
Score = 28.5 bits (62), Expect = 2.6
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = +1
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVDTPSSTGTDQHSNLANINPDGSIRKPVGRVK 85
E+ EEEEEEEE +E+ EV+ + D+ P + +P+G+ +
Sbjct: 223 EEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDE--------PIQKLLEPMGKEQ 378
Query: 86 VKLKTSKMLDSQPNSSDAPSQ----SDTDKSSQQ--QHGL 119
+ S + D+ N D + +D D S ++ HGL
Sbjct: 379 I---ISLLADAASNHRDVADRIRKVADEDVSHRKIFVHGL 489
Score = 27.3 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
Frame = +1
Query: 368 EVDDDGMEEENHGPEDVEEDEEE-DGEGENEEEIEMNRVKRRM 409
E +++ EEE E+ EE+EEE + E E E++ + ++ M
Sbjct: 238 EEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPM 366
>BP034655
Length = 517
Score = 36.6 bits (83), Expect = 0.010
Identities = 18/43 (41%), Positives = 25/43 (57%)
Frame = +1
Query: 358 SPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEI 400
S D E E +++ EEE E+ EEDEE+D E E+E+ I
Sbjct: 133 SDDDEEEEEEEEEEEEEEEEEEEEEEEEEDEEDDEEDEDEDYI 261
Score = 33.9 bits (76), Expect = 0.063
Identities = 19/58 (32%), Positives = 30/58 (50%)
Frame = +1
Query: 344 KGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIE 401
+ E+ + + SD E E +++ EEE E+ EE+EEED E + E+E E
Sbjct: 85 RNEIAAAHLTAADFGLSDDDEEEEEEEEE--EEEEEEEEEEEEEEEEDEEDDEEDEDE 252
Score = 33.9 bits (76), Expect = 0.063
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 369 VDDDGMEEENHGPEDVEEDEEEDGEGENEEEIE 401
+ DD EEE E+ EE+EEE+ E E EE+ E
Sbjct: 130 LSDDDEEEEEEEEEEEEEEEEEEEEEEEEEDEE 228
Score = 30.0 bits (66), Expect = 0.90
Identities = 15/54 (27%), Positives = 30/54 (54%)
Frame = +1
Query: 346 EVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEE 399
E + E + + + +D ++ +++ EEE E+ EE+EEE+ E E ++E
Sbjct: 76 EFHRNEIAAAHLTAADFGLSDDDEEEEEEEEEEEEEEEEEEEEEEEEEDEEDDE 237
Score = 28.1 bits (61), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = +1
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVD 55
E+EEEEEEEEE + +ED+ + D
Sbjct: 166 EEEEEEEEEEEEEEEEEEDEEDDEEDEDED 255
Score = 28.1 bits (61), Expect = 3.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 341 DDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEED 391
DDD+ E + E E+ E E +++ EEE+ ED EEDE+ED
Sbjct: 136 DDDEEEEEEEEEEEE---------EEEEEEEEEEEEEDE--EDDEEDEDED 255
Score = 27.7 bits (60), Expect = 4.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVDTPS 58
E+EEEEEEEEE + +ED + PS
Sbjct: 178 EEEEEEEEEEEEEEDEEDDEEDEDEDYIPVAPS 276
Score = 27.3 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = +1
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVD 55
E+EEEEEEEEE + +E++ E D
Sbjct: 154 EEEEEEEEEEEEEEEEEEEEEEDEEDDEED 243
Score = 27.3 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (57%)
Frame = +1
Query: 25 NEQEEEEEEEEETSAFDVGSKEDNNSGMEVD 55
+E+EEEEEEEEE + +E+ E D
Sbjct: 142 DEEEEEEEEEEEEEEEEEEEEEEEEEDEEDD 234
>AV416122
Length = 414
Score = 36.6 bits (83), Expect = 0.010
Identities = 22/69 (31%), Positives = 36/69 (51%), Gaps = 5/69 (7%)
Frame = +3
Query: 341 DDDKGEVTKMETSEKNCSPSDGRHEVNEVDDD----GMEEENHGPEDVEEDEEEDGEGEN 396
D++ T + + P + ++ NE D+D G EEE+ + EEDEEED E ++
Sbjct: 192 DNNNNHPAVSATDDCSSQPKEAANDDNEPDNDVQFEGEEEEDDEEDKEEEDEEEDDEDDD 371
Query: 397 EE-EIEMNR 404
E E++R
Sbjct: 372 SNGEAEVDR 398
Score = 26.9 bits (58), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (62%)
Frame = +3
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVD 55
E+E++EE++EE + +D+N EVD
Sbjct: 306 EEEDDEEDKEEEDEEEDDEDDDSNGEAEVD 395
>BP054131
Length = 500
Score = 36.2 bits (82), Expect = 0.013
Identities = 24/101 (23%), Positives = 48/101 (46%)
Frame = -2
Query: 300 YSEQPKGSTDFKQEESMLVESPGGEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCSP 359
Y E K D ++EE +E ++S+ D++ G + T K+
Sbjct: 445 YMENYKADLDKRREEKQRLEEGRRKESMDKLRM------DMEKSGGGTVVLNTGLKDQEK 284
Query: 360 SDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEI 400
+ + +++E D+D +EE+ +D+ E+ED E+E+E+
Sbjct: 283 AKSKSKMDE-DEDEVEEDEEMDDDLVYTEDEDAIDEDEDEM 164
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 35.8 bits (81), Expect = 0.016
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 367 NEVDDDGMEEENHGPEDVEEDEEEDGEGENEEE 399
NE ++D EEE+ ED ++D+++D +GE EE+
Sbjct: 249 NEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEED 347
Score = 35.4 bits (80), Expect = 0.022
Identities = 15/58 (25%), Positives = 31/58 (52%)
Frame = +3
Query: 345 GEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIEM 402
G ++T + D + + DDD ++++ E+ E+D+++D E E EE+E+
Sbjct: 222 GPPKPVQTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEV 395
Score = 33.1 bits (74), Expect = 0.11
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +3
Query: 336 TDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGE 395
TD + ++D E E + + D DDDG EEE +D ++DEEE+G E
Sbjct: 243 TDNEEEEDDDEEEDDEDEDDDDDDDD--------DDDGEEEE----DDDDDDEEEEGSEE 386
Query: 396 NEEE 399
E E
Sbjct: 387 VEVE 398
Score = 31.2 bits (69), Expect = 0.41
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 321 PGGEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHG 380
P G TD + + DDD+ E + E + + D E + DDD +EE G
Sbjct: 216 PDGPPKPVQTDN----EEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDD--DEEEEG 377
Query: 381 PEDVEEDEEEDGEG 394
E+VE + ++ +G
Sbjct: 378 SEEVEVEGKDGAKG 419
Score = 28.9 bits (63), Expect = 2.0
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +3
Query: 12 PKGNTNPVSVTLTNEQEEEEEEEEETSAFDVGSKEDNNSGMEVDTPSSTGTDQHSNLANI 71
P G PV NE+EE+++EEE+ D +D++ E + ++ +
Sbjct: 216 PDGPPKPVQTD--NEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEV 389
Query: 72 NPDG 75
+G
Sbjct: 390 EVEG 401
>TC9596 similar to UP|AAR24722 (AAR24722) At5g49400, partial (66%)
Length = 1196
Score = 34.7 bits (78), Expect = 0.037
Identities = 36/130 (27%), Positives = 54/130 (40%), Gaps = 19/130 (14%)
Frame = +2
Query: 12 PKGNTN-PVSVTLTNEQEEEEEEEEETSA----------FDVGS-KEDNNSGMEVDTPSS 59
PK N VS L N +++EE+ ++S+ D GS ED+ E + S
Sbjct: 530 PKLRVNVSVSYDLENNDVDDKEEKAKSSSKKAKRKHRSDSDSGSDSEDSVFETESGSSSV 709
Query: 60 TGTDQHSNLANINPDGSI-------RKPVGRVKVKLKTSKMLDSQPNSSDAPSQSDTDKS 112
TG+D S ++ + RK + K K + K S SSD+ S SD+D
Sbjct: 710 TGSDYSSGSSSDSSSSDSEEERRRRRKKKTQKKKKGRRHKKYSSSSESSDSESASDSDSD 889
Query: 113 SQQQHGLERH 122
+ RH
Sbjct: 890 DKSSRRKRRH 919
>BP056955
Length = 581
Score = 34.7 bits (78), Expect = 0.037
Identities = 25/89 (28%), Positives = 42/89 (47%)
Frame = +1
Query: 21 VTLTNEQEEEEEEEEETSAFDVGSKEDNNSGMEVDTPSSTGTDQHSNLANINPDGSIRKP 80
+TL+ +EEEEEEEEE D G+ D ++ ++ PSS+ H +++P
Sbjct: 22 LTLSRAREEEEEEEEEEEE-DGGASIDWSAEPDISQPSSSP*PLHHRFIHLSP------- 177
Query: 81 VGRVKVKLKTSKMLDSQPNSSDAPSQSDT 109
+ TS + ++S + S S T
Sbjct: 178 ---ISTSTSTSTSTSTSTSTSISTSTSTT 255
>TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (4%)
Length = 493
Score = 34.3 bits (77), Expect = 0.048
Identities = 27/72 (37%), Positives = 36/72 (49%), Gaps = 5/72 (6%)
Frame = -2
Query: 361 DGRHEVNEVDDDGMEEENHGPEDVEEDEEEDG---EGENEEEIEMNR-VKRRMDETLRHG 416
DG E N+ EEE G ED EED++ DG EG+ E+E E + V + E + H
Sbjct: 414 DGAGEDNDRAVAEEEEEEPGEEDGEEDDDGDGVPDEGDEEDEEEDHGVVAEEVAEVVLHA 235
Query: 417 -GTLAEESEVGD 427
G AE G+
Sbjct: 234 EGGFAEGVRAGE 199
Score = 27.3 bits (59), Expect = 5.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -2
Query: 339 DVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEE 398
D++ + GE +E+N + R E V D E+ + + EE+E + +GE ++
Sbjct: 492 DIEPNSGE------NERNNGNNPERGEDETVIDGAGEDNDRAVAEEEEEEPGEEDGEEDD 331
Query: 399 EIE-MNRVKRRMDETLRHGGTLAEESEV 425
+ + + DE HG E +EV
Sbjct: 330 DGDGVPDEGDEEDEEEDHGVVAEEVAEV 247
>TC14970 similar to UP|O24294 (O24294) Legumin (Minor small) precursor,
partial (51%)
Length = 1566
Score = 33.9 bits (76), Expect = 0.063
Identities = 33/152 (21%), Positives = 65/152 (42%)
Frame = +1
Query: 313 EESMLVESPGGEDSLSNTDELLGTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDD 372
+ES E GG E L ++D D T+++ SP D R ++ +V+ D
Sbjct: 319 QESEQEEEEGGSILSGFGAEFLQQVFNIDHD--------TAKQLQSPDDQRRQIVKVEGD 474
Query: 373 GMEEENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDETLRHGGTLAEESEVGDTAALH 432
+ + D +EDEE+ E+E++ + R R R +E E
Sbjct: 475 DLSFISPESADEDEDEED----EDEDQEQHGRHSRPSGRRTRRPSREEDEDE-------- 618
Query: 433 DEYKNTQQEGQAAVVQQQKKHKEPQDKHQKAK 464
DE + +Q G+ ++Q+ + +++ ++ +
Sbjct: 619 DEDEEERQGGRRGPGERQRHFEREEEEEREER 714
>BF177554
Length = 246
Score = 33.9 bits (76), Expect = 0.063
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 370 DDDGMEEENHGPEDVEEDEEEDGEGENEEE 399
D+D EEE + EE+EEE+GE E EE+
Sbjct: 25 DEDSCEEEAGESSEEEEEEEEEGEEEEEED 114
Score = 30.4 bits (67), Expect = 0.69
Identities = 18/55 (32%), Positives = 26/55 (46%), Gaps = 3/55 (5%)
Frame = +1
Query: 348 TKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDE---EEDGEGENEEE 399
T + E +C E E ++ EEE G E+ EED+ + D + E EEE
Sbjct: 10 TSEQQDEDSCE-----EEAGESSEEEEEEEEEGEEEEEEDDGPGDRDAQPEEEEE 159
Score = 30.0 bits (66), Expect = 0.90
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 368 EVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIE 401
E + EEE E EE+EE+DG G+ + + E
Sbjct: 46 EAGESSEEEEEEEEEGEEEEEEDDGPGDRDAQPE 147
Score = 29.3 bits (64), Expect = 1.5
Identities = 17/54 (31%), Positives = 27/54 (49%)
Frame = +1
Query: 335 GTDGDVDDDKGEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDE 388
GT D+D E E+SE+ + E E +DDG + + PE+ EE++
Sbjct: 7 GTSEQQDEDSCEEEAGESSEEE-EEEEEEGEEEEEEDDGPGDRDAQPEEEEEED 165
>BP085186
Length = 388
Score = 33.9 bits (76), Expect = 0.063
Identities = 20/49 (40%), Positives = 28/49 (56%)
Frame = -1
Query: 355 KNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEEEDGEGENEEEIEMN 403
K SP + E NE +++ EEE E+ EE+EEE+ E E E+ E N
Sbjct: 298 KLISPDNADGEGNEEEEEEEEEE----EEEEEEEEEEAEPEEEKNEEEN 164
Score = 31.6 bits (70), Expect = 0.31
Identities = 15/36 (41%), Positives = 20/36 (54%)
Frame = -1
Query: 26 EQEEEEEEEEETSAFDVGSKEDNNSGMEVDTPSSTG 61
E+EEEEEEEEE + +E+ N V+T G
Sbjct: 247 EEEEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGEG 140
Score = 31.6 bits (70), Expect = 0.31
Identities = 15/38 (39%), Positives = 21/38 (54%)
Frame = -1
Query: 369 VDDDGMEEENHGPEDVEEDEEEDGEGENEEEIEMNRVK 406
+ D + E + E+ EE+EEE+ E E EEE E K
Sbjct: 292 ISPDNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEK 179
Score = 30.0 bits (66), Expect = 0.90
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 377 ENHGPEDVEEDEEEDGEGENEEEIEMNRVKRRMDE 411
+ G E+ EE+EEE+ E E EEE E + + +E
Sbjct: 274 DGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEE 170
Score = 30.0 bits (66), Expect = 0.90
Identities = 15/56 (26%), Positives = 30/56 (52%), Gaps = 4/56 (7%)
Frame = -1
Query: 345 GEVTKMETSEKNCSPSDGRHEVNEVDDDGMEEENHGPEDVEEDEE----EDGEGEN 396
G++ + ++ + + E E +++ EEE PE+ + +EE ++GEGEN
Sbjct: 301 GKLISPDNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGEGEN 134
>BP036242
Length = 525
Score = 33.5 bits (75), Expect = 0.082
Identities = 34/133 (25%), Positives = 56/133 (41%), Gaps = 22/133 (16%)
Frame = +3
Query: 300 YSEQPKGSTDFKQEESMLVESPGGEDSLSNT--------DELLGTDGDVDDDKGEV---- 347
++ QP+ K EES+ V + SN DE+ G + K E
Sbjct: 3 HTPQPQQQLQEKSEESLSVSTRKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVEALVKQ 182
Query: 348 --TKMETSEKNCSPSDGRHEVNEV--------DDDGMEEENHGPEDVEEDEEEDGEGENE 397
TK +SE + S G + N D+D E +++G D+ +++E+D G +
Sbjct: 183 SQTKSSSSEDSSVTSTGSYPPNHRYQNCRDSDDEDAEELDDYGASDLSDEDEDDELGGDF 362
Query: 398 EEIEMNRVKRRMD 410
EE M+ K +D
Sbjct: 363 EEDGMSCSKATID 401
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.305 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,378,872
Number of Sequences: 28460
Number of extensions: 96562
Number of successful extensions: 1598
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of query: 496
length of database: 4,897,600
effective HSP length: 94
effective length of query: 402
effective length of database: 2,222,360
effective search space: 893388720
effective search space used: 893388720
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC140550.8