BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140547.14 - phase: 0
(270 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8121 UP|Q9LKJ5 (Q9LKJ5) Multifunctional transport intrinsic me... 379 e-106
TC17213 similar to UP|AAS48064 (AAS48064) NIP2, partial (30%) 143 3e-35
TC7912 similar to UP|Q39800 (Q39800) Delta-tonoplast intrinsic p... 121 1e-28
TC7911 similar to UP|Q39800 (Q39800) Delta-tonoplast intrinsic p... 121 1e-28
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 114 1e-26
AV422786 105 6e-24
TC7806 homologue to UP|Q946J9 (Q946J9) Aquaporin protein PIP1,1,... 96 5e-21
TC8724 homologue to UP|Q9AQU5 (Q9AQU5) Plasma membrane integral ... 91 2e-19
TC7816 homologue to UP|Q9ATM4 (Q9ATM4) Plasma membrane integral ... 91 3e-19
TC7815 similar to UP|Q9AVB5 (Q9AVB5) Plasma membrane intrinsic p... 91 3e-19
TC7924 homologue to UP|CAE53883 (CAE53883) Aquaporin, partial (95%) 89 6e-19
TC14286 homologue to UP|O65357 (O65357) Aquaporin 2, complete 84 3e-17
TC14103 similar to UP|Q84XC6 (Q84XC6) Plasma intrinsic protein 2... 83 4e-17
TC19136 similar to UP|AAQ11827 (AAQ11827) Nodulin-like intrinsic... 82 7e-17
TC9630 similar to UP|AAS48063 (AAS48063) NIP3, partial (18%) 70 3e-13
CN825371 61 2e-10
NP459447 plasma membrane intrinsic protein homolog [Lotus japoni... 55 1e-08
TC15862 homologue to UP|O22339 (O22339) Aquaporin-like transmemb... 55 1e-08
AV409092 50 4e-07
TC14565 homologue to UP|O65741 (O65741) Transmembrane channel pr... 46 6e-06
>TC8121 UP|Q9LKJ5 (Q9LKJ5) Multifunctional transport intrinsic membrane
protein 2, complete
Length = 1213
Score = 379 bits (974), Expect = e-106
Identities = 183/260 (70%), Positives = 223/260 (85%)
Frame = +2
Query: 6 NGNLDVVMNINDDATKKCDDTTIDDHVPLLQKLVAEVVGTFFLIFAGCAAVVVNLNNDKV 65
NG +VV+N+N DA+K + + + V LQK++AE+VGT+F IFAGCA++VVN NND V
Sbjct: 122 NGAHEVVVNVNKDASKTIEVSDTNFTVSFLQKVIAELVGTYFFIFAGCASIVVNKNNDNV 301
Query: 66 VTLPGISIVWGLAVMVLVYSIGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGST 125
VTLPGI++VWGLAVMVLVYS+GHISGAHFNPA TIA +T RFP KQ+PAY+ AQV+GST
Sbjct: 302 VTLPGIALVWGLAVMVLVYSLGHISGAHFNPAATIAFASTKRFPWKQVPAYVSAQVLGST 481
Query: 126 LASGVLKLIFSGKENQFAGTLPAGSDLQAFVVEFIITFFLMFIISGVATDNRAIGELAGL 185
LASG L+LIFSGK NQFAG LP GS+LQAFV+EFIITFFL+FI+ GVATD+RAIGE+AG+
Sbjct: 482 LASGTLRLIFSGKHNQFAGALPTGSNLQAFVIEFIITFFLIFILFGVATDDRAIGEVAGI 661
Query: 186 AVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRGIWIYMVSPILGALAGTWTYTFL 245
VGSTV+LNVLFAGPITGASMNPARS+G A VH+EYRGIWIY++SP LGA+AG W Y +
Sbjct: 662 VVGSTVLLNVLFAGPITGASMNPARSIGSAFVHNEYRGIWIYLLSPTLGAVAGAWVYNIV 841
Query: 246 RITNKPVRELTKSSSFLKAV 265
R T+KP+RE+TK+ SFLK +
Sbjct: 842 RYTDKPLREITKNVSFLKGI 901
>TC17213 similar to UP|AAS48064 (AAS48064) NIP2, partial (30%)
Length = 578
Score = 143 bits (361), Expect = 3e-35
Identities = 64/81 (79%), Positives = 77/81 (95%)
Frame = +3
Query: 169 ISGVATDNRAIGELAGLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRGIWIYM 228
ISGV+TDNRAIGE+AGLA+G+T++LNV+ AGPITGASMNPARSLGPAIVH EY+GIWIY+
Sbjct: 3 ISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYKGIWIYL 182
Query: 229 VSPILGALAGTWTYTFLRITN 249
VSP+LGA+AGTW+Y F+R TN
Sbjct: 183 VSPVLGAVAGTWSYNFIRYTN 245
>TC7912 similar to UP|Q39800 (Q39800) Delta-tonoplast intrinsic protein,
partial (95%)
Length = 1045
Score = 121 bits (304), Expect = 1e-28
Identities = 77/221 (34%), Positives = 115/221 (51%), Gaps = 10/221 (4%)
Frame = +2
Query: 28 IDDHVPL--LQKLVAEVVGTFFLIFAGCAAVVV--NLNNDKVVTLPG---ISIVWGLAVM 80
+DD L ++ +AE + T +FAG + + + +D + G I++ A+
Sbjct: 53 LDDSFSLGSIKAYIAEFISTLLFVFAGVGSAIAYGKVTSDAALDPAGLVAIAVCHAFALF 232
Query: 81 VLVYSIGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKEN 140
V V +ISG H NPAVT G+ + Y IAQ++GS +A +L + G E
Sbjct: 233 VAVSVGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVACFLLHYVTGGLET 412
Query: 141 QFAGTLPAGSDLQAFVVEFIITFFLMFIISGVATDNR--AIGELAGLAVGSTVILNVLFA 198
G + V E IITF L++ + A D + ++G +A +A+G V N+L A
Sbjct: 413 PVHGLAAGVGAFEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAA 592
Query: 199 GPITGASMNPARSLGPAIVHHEYRGIWIYMVSPIL-GALAG 238
GP +G SMNPARS GPA+V + IWIY V P++ G LAG
Sbjct: 593 GPFSGGSMNPARSFGPAVVSGNFHDIWIYWVGPLIGGGLAG 715
>TC7911 similar to UP|Q39800 (Q39800) Delta-tonoplast intrinsic protein,
complete
Length = 1018
Score = 121 bits (303), Expect = 1e-28
Identities = 82/231 (35%), Positives = 121/231 (51%), Gaps = 13/231 (5%)
Frame = +1
Query: 35 LQKLVAEVVGTFFLIFAGCAAVVV--NLNNDKVVTLPG---ISIVWGLAVMVLVYSIGHI 89
++ +AE + T +FAG + + L +D + G ++I A+ V V +I
Sbjct: 109 IKAYIAEFISTLIFVFAGVGSAIAYGKLTSDAALDPAGLVAVAICHAFALFVAVSVGANI 288
Query: 90 SGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQFAGTLP-- 147
SG H NPAVT G+ L Y IAQ++GS +A +LK + G TLP
Sbjct: 289 SGGHVNPAVTFGLALGGQITLLTGLFYWIAQLLGSIVACFLLKFVTGGL------TLPIH 450
Query: 148 --AGSDLQAFVVEFIITFFLMFIISGVATDNR--AIGELAGLAVGSTVILNVLFAGPITG 203
A + V E IITF L++ + A D + ++G +A +A+G V N+L AGP +G
Sbjct: 451 SVAAGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSG 630
Query: 204 ASMNPARSLGPAIVHHEYRGIWIYMVSPIL-GALAGT-WTYTFLRITNKPV 252
SMNPARS GPA+V ++ WIY V P++ G LAG +TY F + P+
Sbjct: 631 GSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGVIYTYVFFPSQHAPL 783
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 114 bits (286), Expect = 1e-26
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Frame = +3
Query: 31 HVPLLQKLVAEVVGTFFLIFAGCAAVVV--NLNNDKVVTLPGI---SIVWGLAVMVLVYS 85
H L+ +AE + TF +FAG + + L +D T G+ SI A+ V V
Sbjct: 120 HPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLISASIAHAFALFVAVSI 299
Query: 86 IGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQFAGT 145
+ISG H NPAVT G + YIIAQ++GS +AS +L + F
Sbjct: 300 SANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLLLAFVTGLAVPAFG-- 473
Query: 146 LPAGSDL-QAFVVEFIITFFLMFIISGVATDNR--AIGELAGLAVGSTVILNVLFAGPIT 202
L AG + A V+E ++TF L++ + A D + ++G +A +A+G V N+L G
Sbjct: 474 LSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILLGGAFD 653
Query: 203 GASMNPARSLGPAIVHHEYRGIWIYMVSPILG 234
GASMNPA S GPA+V + WIY V P++G
Sbjct: 654 GASMNPAVSFGPAVVSWSWSNHWIYWVGPLVG 749
>AV422786
Length = 427
Score = 105 bits (263), Expect = 6e-24
Identities = 46/79 (58%), Positives = 64/79 (80%)
Frame = -3
Query: 169 ISGVATDNRAIGELAGLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRGIWIYM 228
++ VATD+RA+GELAG+AVG+TV+LN+L +GP +G SMNP R+LGPA+ Y+ IWIY+
Sbjct: 425 VTAVATDSRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYL 246
Query: 229 VSPILGALAGTWTYTFLRI 247
V+P LGALAG YT +++
Sbjct: 245 VAPTLGALAGAGVYTLVKL 189
>TC7806 homologue to UP|Q946J9 (Q946J9) Aquaporin protein PIP1,1, complete
Length = 1413
Score = 96.3 bits (238), Expect = 5e-21
Identities = 73/216 (33%), Positives = 104/216 (47%), Gaps = 19/216 (8%)
Frame = +3
Query: 39 VAEVVGTFFLIFAGCAAVVVNLNND---KVVTLPGISIVWGLAVMVLVYSIGHISGAHFN 95
+AE V TF ++ V+ D K V + GI+ +G + LVY ISG H N
Sbjct: 240 IAEFVATFLFLYITVLTVMGVSGADSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHIN 419
Query: 96 PAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQFAGTLPAGSDLQA- 154
PAVT + L + YI+ Q +G+ + +GV+K F GK GTL G++ A
Sbjct: 420 PAVTFGLFLARKLSLTRAIFYIVMQCLGAIVGAGVVK-GFEGKTKY--GTLGGGANFVAP 590
Query: 155 -------FVVEFIITFFLMFIISGVATDNRAIGE-----LAGLAVGSTVILNVLFAGPIT 202
E + TF L++ + R+ + LA L +G V L L PIT
Sbjct: 591 GYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPIT 770
Query: 203 GASMNPARSLGPAIVHHEYRG---IWIYMVSPILGA 235
G +NPARSLG AI+ ++ RG WI+ V P +GA
Sbjct: 771 GTGINPARSLGAAIIFNKDRGWDDHWIFWVGPFIGA 878
>TC8724 homologue to UP|Q9AQU5 (Q9AQU5) Plasma membrane integral protein
ZmPIP1-4 (Plasma membrane integral protein ZmPIP1-3),
partial (93%)
Length = 1560
Score = 91.3 bits (225), Expect = 2e-19
Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Frame = +1
Query: 39 VAEVVGTFFLIFAGCAAVV-VNLNNDKV--VTLPGISIVWGLAVMVLVYSIGHISGAHFN 95
+AE V TF ++ V+ VN + +K V + GI+ +G + LVY ISG H N
Sbjct: 250 IAEFVATFLFLYITVLTVMGVNRSPNKCSSVGIQGIAWAFGGMIFALVYCTAGISGGHIN 429
Query: 96 PAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLK--------LIFSGKENQFAGTLP 147
PAVT + L + YI+ Q +G+ +GV+K +F G N
Sbjct: 430 PAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFEGNARFEMFKGGANVVNPGYT 609
Query: 148 AGSDLQAFVVEFIITFFLMFIISGVATDNR--AIGELAGLAVGSTVILNVLFAGPITGAS 205
G L A +V + + +F + + R + LA L +G V L L PITG
Sbjct: 610 KGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTG 789
Query: 206 MNPARSLGPAIVH---HEYRGIWIYMVSPILGA 235
+NPARSLG AI++ H + WI+ V P +GA
Sbjct: 790 INPARSLGAAIIYNRDHAWDDHWIFWVGPFIGA 888
>TC7816 homologue to UP|Q9ATM4 (Q9ATM4) Plasma membrane integral protein
ZmPIP2-7, complete
Length = 1523
Score = 90.5 bits (223), Expect = 3e-19
Identities = 69/235 (29%), Positives = 106/235 (44%), Gaps = 23/235 (9%)
Frame = +1
Query: 34 LLQKLVAEVVGTFFLIFAGCAAVVVNLNNDKVVTLPG---------ISIVW--GLAVMVL 82
L + ++AE V T ++ ++ + +PG + I W G + VL
Sbjct: 283 LYRAVIAEFVATLLFLYI-TVLTIIGYKRQTDLGIPGNTECDGVGILGIAWAFGGMIFVL 459
Query: 83 VYSIGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQF 142
VY ISG H NPAVT + L + YIIAQ +G+ +G+ K N++
Sbjct: 460 VYCTAGISGGHINPAVTFGLFVGRKVSLVRALLYIIAQCLGAICGAGLAKGFQKSFYNRY 639
Query: 143 AG---TLPAG-SDLQAFVVEFIITFFLMFIISGVATDNR-----AIGELAGLAVGSTVIL 193
G T+ G S A E I TF L++ + R + LA L +G V +
Sbjct: 640 GGGANTISDGYSKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFM 819
Query: 194 NVLFAGPITGASMNPARSLGPAIVHHE---YRGIWIYMVSPILGALAGTWTYTFL 245
L P+TG +NPARS GPA++ +E + W+Y V P +GAL + ++
Sbjct: 820 VHLATIPVTGTGINPARSFGPAVIFNEDKVWDDQWVYWVGPFVGALVAAIYHQYI 984
>TC7815 similar to UP|Q9AVB5 (Q9AVB5) Plasma membrane intrinsic protein
2-1, complete
Length = 1450
Score = 90.5 bits (223), Expect = 3e-19
Identities = 65/225 (28%), Positives = 102/225 (44%), Gaps = 17/225 (7%)
Frame = +1
Query: 38 LVAEVVGTFFLIFAGCAAVVVNLNNDKVVTLPG---ISIVW--GLAVMVLVYSIGHISGA 92
L+AE + T ++ V+ + + G + I W G + +LVY ISG
Sbjct: 184 LIAEFIATLLFLYVTVLTVIGHSRLNSADPCDGAGILGIAWAFGGMIFILVYCTAGISGG 363
Query: 93 HFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQFAGTL----PA 148
H NPAVT + L + YI+AQ +G+ G+ K N++ G P
Sbjct: 364 HINPAVTFGLFIGRKVSLIRALLYIVAQCLGAISGVGLAKAFQKSFYNRYGGAANFVQPG 543
Query: 149 GSDLQAFVVEFIITFFLMFIISGVATDNR-----AIGELAGLAVGSTVILNVLFAGPITG 203
S+ A E I TF L++ + R + LA L +G V + L P+TG
Sbjct: 544 YSNGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTG 723
Query: 204 ASMNPARSLGPAIVHHE---YRGIWIYMVSPILGALAGTWTYTFL 245
+NPARS G A++++E + WI+ V P +GALA + ++
Sbjct: 724 TGINPARSFGAAVIYNEDKIWDDHWIFWVGPFIGALAAAIYHQYI 858
>TC7924 homologue to UP|CAE53883 (CAE53883) Aquaporin, partial (95%)
Length = 1078
Score = 89.4 bits (220), Expect = 6e-19
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Frame = +2
Query: 38 LVAEVVGTFFLIFAGCAAVVVNLNNDKV---VTLPGISIVWGLAVMVLVYSIGHISGAHF 94
L+AE + T ++ A V+ + V L GI+ +G + VLVY ISG H
Sbjct: 131 LIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHI 310
Query: 95 NPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLI-------FSGKENQFAGTLP 147
NPAVT + L + Y++AQ +G+ G++K G N A
Sbjct: 311 NPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKAFMKHPYNSLGGGANSVAHGYS 490
Query: 148 AGSDLQAFVVEFIITFFLMFIISGVATDNRA-----IGELAGLAVGSTVILNVLFAGPIT 202
GS L A E I TF L++ + R+ + LA L +G V + L PIT
Sbjct: 491 KGSALGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPIT 661
Query: 203 GASMNPARSLGPAIVHHE---YRGIWIYMVSPILGALAGTWTYTFL 245
G +NPARS G A++ + + WI+ V P +GALA + ++
Sbjct: 662 GTGINPARSFGAAVIFNNGKVWDDQWIFWVGPFVGALAAAAYHQYI 799
>TC14286 homologue to UP|O65357 (O65357) Aquaporin 2, complete
Length = 1278
Score = 83.6 bits (205), Expect = 3e-17
Identities = 61/229 (26%), Positives = 104/229 (44%), Gaps = 21/229 (9%)
Frame = +1
Query: 38 LVAEVVGTFFLIFAGCAAVV-------VNLNNDKV--VTLPGISIVWGLAVMVLVYSIGH 88
++AE + T ++ V+ V D V + GI+ +G + +LVY
Sbjct: 226 VIAEFIATLLFLYITVLTVIGYKVQSDVKNGGDDCGGVGILGIAWAFGGMIFILVYCTAG 405
Query: 89 ISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKENQFAGTLPA 148
ISG H NPAVT + L + Y++AQ +G+ G++K N++ G +
Sbjct: 406 ISGGHINPAVTFGLFLARKVSLIRAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANS 585
Query: 149 GSDLQA----FVVEFIITFFLMFIISGVATDNRA-----IGELAGLAVGSTVILNVLFAG 199
+D + E I TF L++ + R+ + LA L +G V + L
Sbjct: 586 LNDGYSTGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATI 765
Query: 200 PITGASMNPARSLGPAIVHHE---YRGIWIYMVSPILGALAGTWTYTFL 245
P+TG +NPARS G A++ ++ + WI+ V P +GA + + F+
Sbjct: 766 PVTGTGINPARSFGAAVIFNQSKPWDDHWIFWVGPFIGAAIAAFYHQFI 912
>TC14103 similar to UP|Q84XC6 (Q84XC6) Plasma intrinsic protein 2,2, partial
(94%)
Length = 1199
Score = 83.2 bits (204), Expect = 4e-17
Identities = 68/235 (28%), Positives = 103/235 (42%), Gaps = 24/235 (10%)
Frame = +3
Query: 25 DTTIDDHVPLLQKLVAEVVGTFFLIFAGCAAVV-VNLNNDKVVT--------LPGISIVW 75
DTT + L+AE V T ++ V+ + D T + GI+ +
Sbjct: 171 DTTELTKWSFYRALIAEFVATLLFLYITVLTVIGYSSQTDPANTTDPCGGVGILGIAWAF 350
Query: 76 GLAVMVLVYSIGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLI- 134
G + +LVY ISG H NPAVT + L + Y++AQ +G+ G++K
Sbjct: 351 GGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALFYMVAQCLGAISGVGLVKAFQ 530
Query: 135 ------FSGKENQFAGTLPAGSDLQAFVVEFIITFFLMFIISGVATDNR-----AIGELA 183
+ G N A G+ L A E I TF L++ + R + LA
Sbjct: 531 KSYYNRYHGGANMLADGYSKGTGLGA---EIIGTFVLVYTVFSATDPKRNARDSHVPVLA 701
Query: 184 GLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRG---IWIYMVSPILGA 235
L +G V + L PITG +NPARS G A++++ + WI+ V P +GA
Sbjct: 702 PLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFIGA 866
>TC19136 similar to UP|AAQ11827 (AAQ11827) Nodulin-like intrinsic protein
NIP1-2 (Fragment), partial (29%)
Length = 556
Score = 82.4 bits (202), Expect = 7e-17
Identities = 43/83 (51%), Positives = 52/83 (61%)
Frame = +2
Query: 32 VPLLQKLVAEVVGTFFLIFAGCAAVVVNLNNDKVVTLPGISIVWGLAVMVLVYSIGHISG 91
VPL QK++AE VGTF LIFA A +VN D L G + GL VM ++ SIGHISG
Sbjct: 308 VPLTQKILAEFVGTFILIFAATAGPIVNNKYDGAEGLMGNAATAGLTVMFIILSIGHISG 487
Query: 92 AHFNPAVTIAHTTTGRFPLKQLP 114
AH NP++TIA FP Q+P
Sbjct: 488 AHLNPSLTIAFAAFRHFPWSQVP 556
>TC9630 similar to UP|AAS48063 (AAS48063) NIP3, partial (18%)
Length = 971
Score = 70.5 bits (171), Expect = 3e-13
Identities = 29/60 (48%), Positives = 45/60 (74%)
Frame = +3
Query: 191 VILNVLFAGPITGASMNPARSLGPAIVHHEYRGIWIYMVSPILGALAGTWTYTFLRITNK 250
+I +L+ P TGASMNP R+LGPAI + Y+ IW+Y+V+P+LGAL+G YT +++ ++
Sbjct: 165 IICFILYCRPETGASMNPVRTLGPAIAANNYKAIWVYLVAPVLGALSGAGIYTAVKLPDE 344
>CN825371
Length = 483
Score = 61.2 bits (147), Expect = 2e-10
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +1
Query: 178 AIGELAGLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRGIWIYMVSPILGALA 237
+IG +A LA+G V N+L GP GA MNPA + GP++V + W++ + P LGA
Sbjct: 13 SIGAIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWRWHYHWVFWLGPFLGAAL 192
Query: 238 GTWTYTFLRITNKP 251
Y +L I +P
Sbjct: 193 AALIYEYLVIPTEP 234
>NP459447 plasma membrane intrinsic protein homolog [Lotus japonicus]
Length = 578
Score = 55.1 bits (131), Expect = 1e-08
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Frame = +1
Query: 39 VAEVVGTFFLIFAGCAAVVVNLNNDKV---VTLPGISIVWGLAVMVLVYSIGHISGAHFN 95
+AE + TF ++ V+ + + V + GI+ +G + LVY ISG H N
Sbjct: 73 IAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHIN 252
Query: 96 PAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLK-------LIFSGKENQFAGTLPA 148
PAVT + L + YI+ Q +G+ +GV+K G N A
Sbjct: 253 PAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTK 432
Query: 149 GSDLQAFVVEFIITFFLMFIISGVATDNRA------IGELAGLAVGSTVIL 193
GS L A E I TF L++ + ATD + + LA L +G V L
Sbjct: 433 GSGLGA---EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFL 573
>TC15862 homologue to UP|O22339 (O22339) Aquaporin-like transmembrane
channel protein, partial (61%)
Length = 576
Score = 55.1 bits (131), Expect = 1e-08
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 39 VAEVVGTFFLIFAGCAAVVVNLNND---KVVTLPGISIVWGLAVMVLVYSIGHISGAHFN 95
+AE V TF ++ V+ +D K V + GI+ +G + LVY ISG H N
Sbjct: 216 IAEFVATFLFLYITILTVMGVNKSDTKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHIN 395
Query: 96 PAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFSGKE 139
PAVT + L + Y++ QV+G+ +GV+K F GK+
Sbjct: 396 PAVTFGLFLARKLSLTRAVFYMVMQVLGAICGAGVVK-GFEGKK 524
>AV409092
Length = 426
Score = 50.1 bits (118), Expect = 4e-07
Identities = 36/110 (32%), Positives = 53/110 (47%), Gaps = 5/110 (4%)
Frame = +3
Query: 32 VPLLQKLVAEVVGTFFLIFAGCAAVVV--NLNNDKVVTLPG---ISIVWGLAVMVLVYSI 86
V L+ +AE + T IFAG + + L +D + G +++ A+ V V
Sbjct: 72 VTSLKAYLAEFIATLLFIFAGVGSAIAYNELTSDAALDPTGLVAVALAHAFALFVGVSIA 251
Query: 87 GHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGVLKLIFS 136
+ISG H NPAVT+ G L Y IAQ++GS +A +L I S
Sbjct: 252 ANISGGHLNPAVTLGLAVGGNITLLTGFFYWIAQLLGSIVACLLLNFITS 401
>TC14565 homologue to UP|O65741 (O65741) Transmembrane channel protein
(Fragment), partial (86%)
Length = 539
Score = 46.2 bits (108), Expect = 6e-06
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +2
Query: 182 LAGLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYRG---IWIYMVSPILGA 235
LA L +G V L L PITG +NPARSLG +IV ++ G WI+ V P +GA
Sbjct: 74 LAPLPIGFAVFLVHLATIPITGTGINPARSLGASIVFNKDLGWDDHWIFWVGPFIGA 244
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,935,411
Number of Sequences: 28460
Number of extensions: 47072
Number of successful extensions: 249
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of query: 270
length of database: 4,897,600
effective HSP length: 89
effective length of query: 181
effective length of database: 2,364,660
effective search space: 428003460
effective search space used: 428003460
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC140547.14