BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140033.4 + phase: 0
(495 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AU089102 118 2e-27
AV413186 97 5e-21
BP038410 85 3e-17
BP081623 74 7e-14
BP063629 67 7e-12
TC19836 60 8e-10
AI967878 59 1e-09
AV779633 57 7e-09
AV769479 55 3e-08
TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-l... 50 1e-06
AV767495 48 4e-06
AV766731 41 5e-04
AV409405 39 0.002
BP035488 37 0.010
TC19070 weakly similar to UP|Q9LRP6 (Q9LRP6) DNA-binding protein... 36 0.016
TC17100 similar to UP|MID2_YEAST (P36027) Mating process protein... 35 0.021
CN825203 35 0.037
BP042107 34 0.062
TC13710 33 0.14
BP044414 31 0.53
>AU089102
Length = 480
Score = 118 bits (296), Expect = 2e-27
Identities = 54/145 (37%), Positives = 85/145 (58%)
Frame = +2
Query: 348 NEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKF 407
N++T+V +L ACSHAG +DEG +YFD + I+ H C+VD+ GRAG LKE
Sbjct: 38 NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEXHYACLVDLCGRAGRLKEXFYI 217
Query: 408 IDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEW 467
I+ + ++ + +W LLA C VHG+ ++ K+ K+ + +++G Y L+SN+YAS W
Sbjct: 218 IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSLLSNMYASXRXW 397
Query: 468 DGAEKVRKLMDDSGVTKIRGSSFVE 492
V M+D G+ K ++E
Sbjct: 398 KXXAPVXMKMNDKGLKKQPRCXWIE 472
>AV413186
Length = 398
Score = 97.4 bits (241), Expect = 5e-21
Identities = 48/122 (39%), Positives = 77/122 (62%), Gaps = 1/122 (0%)
Frame = +1
Query: 291 DMYAKCGNIKESLDVFWSITDK-DVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNE 349
DMY+KCG+++ + VF + +K DV+ WN++I +A HG G E++ + M R+ + PN
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 350 ITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFID 409
TFV +L ACS +G + EG ++F M+SE+ + P+ H C+ D+L RAG E+ K +
Sbjct: 184 ATFVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDESVKGLQ 363
Query: 410 SM 411
M
Sbjct: 364 IM 369
Score = 53.9 bits (128), Expect = 6e-08
Identities = 43/132 (32%), Positives = 66/132 (49%), Gaps = 2/132 (1%)
Frame = +1
Query: 191 YVKQGEMESARMLFDEAPVK-DVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVT 249
Y K G +E+A +F+ K DVV WN MI+ G +A+ + N+M R+GV P+ T
Sbjct: 10 YSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNRAT 189
Query: 250 LLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNA-LIDMYAKCGNIKESLDVFWS 308
+ LL+AC+ G ++ G + K M G + A L D+ + G ES+
Sbjct: 190 FVVLLNACSLSGLVQEGLQFF-KFMTSEFGVVPDQEHYACLTDLLVRAGYFDESVKGL-Q 363
Query: 309 ITDKDVISWNSV 320
I D + WNS+
Sbjct: 364 IMD-CTLGWNSL 396
Score = 31.2 bits (69), Expect = 0.41
Identities = 17/49 (34%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Frame = +1
Query: 129 HAKCGDLNVATSLFD-DSCKGDVVAWSSLIAGYARRGDLKVARKLFNEM 176
++KCG L A +F+ K DVV W+++I+ A G A + N+M
Sbjct: 10 YSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDM 156
Score = 29.3 bits (64), Expect = 1.5
Identities = 28/128 (21%), Positives = 53/128 (40%), Gaps = 9/128 (7%)
Frame = +1
Query: 360 SHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSM---KIEPN 416
S G ++ ++ F+L+ ++ ++ M+ L G EA ++ M +EPN
Sbjct: 13 SKCGSLETAWRVFNLVGNKQ----DVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPN 180
Query: 417 AIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSG------DYVLMSNLYASRGEWDGA 470
+ LL AC + G V+ + F G Y +++L G +D +
Sbjct: 181 RATFVVLLNACSLSGLVQ----EGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDES 348
Query: 471 EKVRKLMD 478
K ++MD
Sbjct: 349 VKGLQIMD 372
>BP038410
Length = 468
Score = 84.7 bits (208), Expect = 3e-17
Identities = 53/148 (35%), Positives = 78/148 (51%)
Frame = -2
Query: 211 DVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVH 270
D+VSWN++ +LF +MC +G+ T+L LL A D G+ GK +H
Sbjct: 404 DLVSWNSVF-------------DLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLH 264
Query: 271 AKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHG 330
++I +L ALIDMYAK G + +F S+ DKDV+ WN +I A +G
Sbjct: 263 GYYIQIGFSSHLNVL-TALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 87
Query: 331 KESLSLFKMMQRTKICPNEITFVGVLVA 358
E+L L + M+ + N TFVG+L+A
Sbjct: 86 GEALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 50.1 bits (118), Expect = 8e-07
Identities = 26/74 (35%), Positives = 40/74 (53%)
Frame = -2
Query: 103 GSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYAR 162
G ++HG +++GF S+ V L+ +AK G ++ +FD DVV W+ LI YAR
Sbjct: 278 GKSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 99
Query: 163 RGDLKVARKLFNEM 176
G + A L +M
Sbjct: 98 NGLVGEALYLLQKM 57
Score = 45.4 bits (106), Expect = 2e-05
Identities = 44/151 (29%), Positives = 62/151 (40%), Gaps = 14/151 (9%)
Frame = -2
Query: 120 VVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYAR----------RGDLKVA 169
VV + H + DL S+FD K + WS LIA + G+ V
Sbjct: 446 VVTCLMPTVHPEGNDLVSWNSVFDLFTK---MCWSGLIASASTVLILLPAAGDTGNFVVG 276
Query: 170 RKLFNEMPERDLVSWNVMITG----YVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVC 225
+ L + S ++T Y K G + R +FD KDVV WN +I Y
Sbjct: 275 KSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 96
Query: 226 GLSKQALELFNEMCRAGVFPDEVTLLSLLSA 256
GL +AL L +M G+ + T + LL A
Sbjct: 95 GLVGEALYLLQKMRIQGMKTNSSTFVGLLLA 3
>BP081623
Length = 461
Score = 73.6 bits (179), Expect = 7e-14
Identities = 33/74 (44%), Positives = 47/74 (62%)
Frame = -2
Query: 419 IWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMD 478
+W LL AC+++GDV L + A E LF ++ H G Y+L++N+YA WD A KVR+LM
Sbjct: 460 VWGALLGACRIYGDVGLGRWAAEHLFELKPQHCGYYILLANMYAEIERWDDANKVRQLMK 281
Query: 479 DSGVTKIRGSSFVE 492
G K G S+V+
Sbjct: 280 SRGAKKNPGCSWVK 239
>BP063629
Length = 525
Score = 67.0 bits (162), Expect = 7e-12
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +1
Query: 35 NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKAC 94
+YA ++F I QP F YNVMI+ ++ + RAISL+ ++ V D+YT+P+VLKA
Sbjct: 244 HYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 423
Query: 95 TRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLL 126
L V G VH V++ G +A V N+L+
Sbjct: 424 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 519
Score = 57.4 bits (137), Expect = 5e-09
Identities = 34/115 (29%), Positives = 61/115 (52%)
Frame = +1
Query: 178 ERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNE 237
+RD ++ + I+ G+ A +FD + ++N MI + G ++A+ LF +
Sbjct: 184 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 363
Query: 238 MCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDM 292
+ GV+PD T +L A LGD+ G+KVHA V++ + + + N+L+DM
Sbjct: 364 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL-EFDAYVCNSLMDM 525
>TC19836
Length = 464
Score = 60.1 bits (144), Expect = 8e-10
Identities = 27/86 (31%), Positives = 51/86 (58%)
Frame = +2
Query: 410 SMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDG 469
+M ++P+ IW +L++ACK+HG +++A++ +L D++ +Y L++ +YA G W
Sbjct: 5 TMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAEHGHWLH 184
Query: 470 AEKVRKLMDDSGVTKIRGSSFVEACN 495
E+V + M + K G S +E N
Sbjct: 185 KEQVMEAMKLQRLKKCYGFSRIETGN 262
>AI967878
Length = 393
Score = 59.3 bits (142), Expect = 1e-09
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 20/112 (17%)
Frame = +1
Query: 310 TDKDVISWNSVIVGMALHGHGKESLSLFKMMQR--------------------TKICPNE 349
T+++++SWN++I+G +HG+ ++ LSLF M ++ P+E
Sbjct: 25 TNRNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDE 204
Query: 350 ITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLL 401
+TF+G+L AC+ A + EG YF M+ + ++P + G L GLL
Sbjct: 205 VTFIGILCACARAELLAEGRSYFKQMTDVFGLKPILLIYGAWPICLQMHGLL 360
Score = 43.1 bits (100), Expect = 1e-04
Identities = 33/102 (32%), Positives = 44/102 (42%), Gaps = 4/102 (3%)
Frame = +1
Query: 179 RDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEM 238
R+LVSWN MI G+ G E LFDE D V K +E+
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKV---------------KGEVEIDESP 165
Query: 239 CR-AGVF---PDEVTLLSLLSACADLGDLENGKKVHAKVMEI 276
C GV PDEVT + +L ACA L G+ ++ ++
Sbjct: 166 CADRGVVRLPPDEVTFIGILCACARAELLAEGRSYFKQMTDV 291
>AV779633
Length = 440
Score = 57.0 bits (136), Expect = 7e-09
Identities = 41/150 (27%), Positives = 66/150 (43%)
Frame = -2
Query: 204 FDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDL 263
FD +DV+ N +I GY GL QAL L + GV PD V+ SLL GDL
Sbjct: 439 FDGGIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDL 260
Query: 264 ENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVG 323
+ + +++ S L N +D + NI+ +L ++ ++I
Sbjct: 259 VRAESLFDEILGFQRDGESGQLKNNAVDTRDELRNIRPTL-----------ATYTTLISA 113
Query: 324 MALHGHGKESLSLFKMMQRTKICPNEITFV 353
H +ES SL++ M + I P+ + +
Sbjct: 112 YGKHCGIEESRSLYEQMVMSGIMPDVLLVI 23
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Frame = -2
Query: 114 GFGSNAVVRNTLLVFHAKCGDLNVATSLFDDS----CKGDVVAWSSLIAGYARRGDLKVA 169
G + + NTL+ + + G ++ A +L ++S K D+V+++SL+ G+ + GDL A
Sbjct: 430 GIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRA 251
Query: 170 RKLFNEMP--ERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGY-VVCG 226
LF+E+ +RD S G +K +++ L + P + ++ +I+ Y CG
Sbjct: 250 ESLFDEILGFQRDGES------GQLKNNAVDTRDELRNIRPT--LATYTTLISAYGKHCG 95
Query: 227 LSKQALELFNEMCRAGVFPDEVTLL 251
+ +++ L+ +M +G+ PD + ++
Sbjct: 94 I-EESRSLYEQMVMSGIMPDVLLVI 23
Score = 31.6 bits (70), Expect = 0.31
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = -2
Query: 112 RLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARK 171
+ G + V N+LL K GDL A SLFD+ I G+ R G+ +
Sbjct: 331 KTGVKPDIVSYNSLLKGFCKAGDLVRAESLFDE------------ILGFQRDGESGQLKN 188
Query: 172 LFNEMPERD--------LVSWNVMITGYVKQGEMESARMLFDEAPVKDVV 213
N + RD L ++ +I+ Y K +E +R L+++ + ++
Sbjct: 187 --NAVDTRDELRNIRPTLATYTTLISAYGKHCGIEESRSLYEQMVMSGIM 44
>AV769479
Length = 287
Score = 54.7 bits (130), Expect = 3e-08
Identities = 26/91 (28%), Positives = 48/91 (52%)
Frame = +1
Query: 250 LLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSI 309
L+ ++ C+ DL GK++HA +++ L + NA ++ YA+CG I + F +
Sbjct: 4 LVCHMNLCSKRVDLALGKQIHAHILKSKWRNL--IADNAFVNFYAECGKISSAFRTFDRM 177
Query: 310 TDKDVISWNSVIVGMALHGHGKESLSLFKMM 340
+DV+ W ++I + G G E+L + M
Sbjct: 178 AKRDVVCWTTIITACSQQGLGHEALLILSQM 270
Score = 43.5 bits (101), Expect = 8e-05
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +1
Query: 91 LKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDV 150
+ C++ + G +H +L+ + N + N + F+A+CG ++ A FD K DV
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKW-RNLIADNAFVNFYAECGKISSAFRTFDRMAKRDV 192
Query: 151 VAWSSLIAGYARRG 164
V W+++I +++G
Sbjct: 193 VCWTTIITACSQQG 234
>TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-like,
partial (4%)
Length = 560
Score = 49.7 bits (117), Expect = 1e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -3
Query: 5 GFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPN 64
GF+ N +G +++ + S+ NYA +F ++ +PD F++N MIRG +
Sbjct: 273 GFHQNHLVVGKIIVFCAVSVPAGDM-----NYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ 109
Query: 65 PLRAISLYTEMHR--HFVKGDSYTFPFVLK 92
P +A+ Y M + V D++TF F+LK
Sbjct: 108 PEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 19
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/76 (28%), Positives = 37/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 106 VHGMVLRLGFGSNAVVRNTLLVFHA---KCGDLNVATSLFDDSCKGDVVAWSSLIAGYAR 162
+H + + GF N +V ++VF A GD+N A S+FD K D W+++I G+
Sbjct: 297 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 118
Query: 163 RGDLKVARKLFNEMPE 178
+ A + M +
Sbjct: 117 TNQPEKAVLFYKRMQQ 70
Score = 33.1 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 192 VKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRA--GVFPDEVT 249
V G+M A +FD D WN MI G+ ++A+ + M + V PD T
Sbjct: 216 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 37
Query: 250 LLSLLSACADLG 261
LL LG
Sbjct: 36 FSFLLKIVGGLG 1
>AV767495
Length = 586
Score = 47.8 bits (112), Expect = 4e-06
Identities = 45/181 (24%), Positives = 71/181 (38%), Gaps = 18/181 (9%)
Frame = +2
Query: 211 DVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVH 270
DVV ++A+I GL + ++ L + M G+ P+ VT S++ A L LE G
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDTS 205
Query: 271 AKVMEISMGKLSTLLGNALIDMYA------------------KCGNIKESLDVFWSITDK 312
+ E + S++L + + A K G IK+ + DK
Sbjct: 206 VQANEHRVVPSSSMLIDGALQNLAIGKEDDRIMKMFEQLAAEKSGQIKKDMR---GSQDK 376
Query: 313 DVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYF 372
I W LF+ M +I PN +TF +L ACS+ ++ K
Sbjct: 377 FCILW------------------LFRKMHEMEIKPNVVTFSAILNACSNCKSFEDASKLL 502
Query: 373 D 373
D
Sbjct: 503 D 505
>AV766731
Length = 576
Score = 40.8 bits (94), Expect = 5e-04
Identities = 33/134 (24%), Positives = 66/134 (48%), Gaps = 12/134 (8%)
Frame = -3
Query: 117 SNAVVRNTLLVFHAKCGDLNVATSLF----DDSCKGDVVAWSSLIAGYARRGDLKVARKL 172
++ + N+L K L+ A +LF D + ++ + +I G + G LK+A+++
Sbjct: 448 ADLITTNSLFDGLCKHHLLDKAIALFMKVKDPKIQPNIPPYPVIIDGLCKVGRLKIAQEI 269
Query: 173 F----NEMPERDLVSWNVMITGYVKQGEMESARMLF----DEAPVKDVVSWNAMIAGYVV 224
F +E +++++ VMI GY K+G ++ A+ L D + + V++ +I
Sbjct: 268 FQVLLSEGYNLNVMTYTVMINGYCKEGLLDEAQALLSKMEDNGCIPNAVNFQTIICALFE 89
Query: 225 CGLSKQALELFNEM 238
+ +A LF EM
Sbjct: 88 KNENDKAERLFREM 47
>AV409405
Length = 424
Score = 38.9 bits (89), Expect = 0.002
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 104 SAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARR 163
S +H + L+LG ++ + L V + K ++ A LFD++ V W++L+ Y
Sbjct: 196 SQLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAE 375
Query: 164 GDLKVARKLFNEM 176
G+ LF M
Sbjct: 376 GEWAETLSLFRRM 414
Score = 37.4 bits (85), Expect = 0.006
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 191 YVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEM 238
Y K + A LFDE P K V WNA++ Y G + L LF M
Sbjct: 271 YGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLFRRM 414
Score = 35.0 bits (79), Expect = 0.028
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 160 YARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLF 204
Y + + A KLF+E P++ + WN ++ Y +GE LF
Sbjct: 271 YGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLF 405
Score = 33.5 bits (75), Expect = 0.082
Identities = 17/52 (32%), Positives = 26/52 (49%)
Frame = +1
Query: 292 MYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRT 343
+Y K +I + +F DK V WN+++ G E+LSLF+ M T
Sbjct: 268 LYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLFRRMHAT 423
Score = 29.6 bits (65), Expect = 1.2
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 35 NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMH 76
++AH+LF + P +++N ++R +SL+ MH
Sbjct: 292 HHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLFRRMH 417
>BP035488
Length = 534
Score = 36.6 bits (83), Expect = 0.010
Identities = 35/146 (23%), Positives = 66/146 (44%), Gaps = 10/146 (6%)
Frame = +3
Query: 149 DVVAWSSLIAGYARRGDLKVARKLFNEMPER----DLVSWNVMITGYVKQGEMESARMLF 204
D+ W+ ++ G+ G+ A++++ ++ DL ++ I K+G++ +A LF
Sbjct: 66 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALTKKGKLGTALKLF 245
Query: 205 -----DEAPVK-DVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACA 258
+ K DVV N +I +ALE+F +M G P+ T SL+
Sbjct: 246 RGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPNVATYNSLIKHLC 425
Query: 259 DLGDLENGKKVHAKVMEISMGKLSTL 284
+ +E KV+ V ++ K S +
Sbjct: 426 KIRRME---KVYELVEDMERKKGSCM 494
Score = 34.3 bits (77), Expect = 0.048
Identities = 38/181 (20%), Positives = 73/181 (39%), Gaps = 7/181 (3%)
Frame = +3
Query: 179 RDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEM 238
RD+ +WNV++ G+ G A+ ++ KD+++
Sbjct: 63 RDIKTWNVILNGWCVLGNAHEAKRVW-----KDIMA----------------------SK 161
Query: 239 CRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMG-KLSTLLGNALIDMYAKCG 297
CR PD T + + A G L K+ + K ++ N +ID
Sbjct: 162 CR----PDLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKK 329
Query: 298 NIKESLDVFWSITDK----DVISWNSVIVGMALHGHGKESLSLFKMMQRTK--ICPNEIT 351
+ E+L+VF + ++ +V ++NS+I + ++ L + M+R K PN +T
Sbjct: 330 RVPEALEVFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVT 509
Query: 352 F 352
+
Sbjct: 510 Y 512
Score = 26.9 bits (58), Expect = 7.6
Identities = 23/86 (26%), Positives = 38/86 (43%), Gaps = 10/86 (11%)
Frame = +3
Query: 131 KCGDLNVATSLFDD------SCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPER----D 180
K G L A LF +CK DVV + +I + + A ++F +M ER +
Sbjct: 210 KKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 389
Query: 181 LVSWNVMITGYVKQGEMESARMLFDE 206
+ ++N +I K ME L ++
Sbjct: 390 VATYNSLIKHLCKIRRMEKVYELVED 467
>TC19070 weakly similar to UP|Q9LRP6 (Q9LRP6) DNA-binding protein
(AT3g15590/MQD17_5), partial (20%)
Length = 744
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/127 (22%), Positives = 58/127 (44%), Gaps = 7/127 (5%)
Frame = +3
Query: 364 EIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSM-----KIEPNAI 418
+I+E F++M++++K+ ++ ++ + +LK+ I M KI P +
Sbjct: 48 KIEEAEAIFEMMANKWKLSS--KNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGP--L 215
Query: 419 IWRTLLAACKVHGDVELAKVANEKLFSMRK--DHSGDYVLMSNLYASRGEWDGAEKVRKL 476
W +L+ G+VE A +K+ + Y+ + YA RG+ +EK+
Sbjct: 216 TWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSEKIFHR 395
Query: 477 MDDSGVT 483
M +G T
Sbjct: 396 MRQAGYT 416
Score = 29.6 bits (65), Expect = 1.2
Identities = 13/67 (19%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 143 DDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLV-----SWNVMITGYVKQGEM 197
++ CK + W SL+ Y + G+++ A + ++ E+ + ++ ++ Y K+G++
Sbjct: 189 ENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDV 368
Query: 198 ESARMLF 204
++ +F
Sbjct: 369 HNSEKIF 389
Score = 26.9 bits (58), Expect = 7.6
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 153 WSSLIAGYARRGDLKVARKLFNEMPERDLVS----WNVMITGYVK 193
+ +++ YA+RGD+ + K+F+ M + S + V++ Y+K
Sbjct: 327 YMAVMEQYAKRGDVHNSEKIFHRMRQAGYTSRITPFQVLVQAYIK 461
>TC17100 similar to UP|MID2_YEAST (P36027) Mating process protein MID2
(Serine-rich protein SMS1) (Protein kinase A
interference protein), partial (7%)
Length = 704
Score = 35.4 bits (80), Expect = 0.021
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 LIAGYARRGDLKVARKLFNEMPERDLV----SWNVMITGYVKQGEMESARMLFDEA 207
L+ GY+++G ++ A + M E+ SW+++ +GYV Q ME A EA
Sbjct: 72 LLIGYSKKGLIEKAETMLRSMVEKGKTPNPYSWSIVASGYVAQENMEKAFQCLKEA 239
>CN825203
Length = 644
Score = 34.7 bits (78), Expect = 0.037
Identities = 22/74 (29%), Positives = 36/74 (47%), Gaps = 15/74 (20%)
Frame = -2
Query: 156 LIAGYARRGDLKVARKLFNEMPERDLV----SWNVMITGYVKQGEMESARMLFDEA---- 207
L+ GY+R+G ++ A + M ++ SW+++ +G+V + ME A F EA
Sbjct: 628 LLIGYSRKGLIEKAETMLRSMVDKGKTPTPNSWSIIASGHVAKENMEKAFQCFKEALAVL 449
Query: 208 -------PVKDVVS 214
P DVVS
Sbjct: 448 AENKGWRPKSDVVS 407
>BP042107
Length = 515
Score = 33.9 bits (76), Expect = 0.062
Identities = 18/92 (19%), Positives = 44/92 (47%)
Frame = +1
Query: 35 NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKAC 94
++ +++ P P +++++ + + AISL +M ++ D T ++
Sbjct: 214 SFFNRMLQMHPTPSIIEFSMILTSLVKMKHYSTAISLSHQMELKGIRPDIVTSSILINCY 393
Query: 95 TRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLL 126
L + + +V G +L+ G+ N ++ NTL+
Sbjct: 394 CHLGQLTSAFSVMGNILKRGYQPNTIILNTLM 489
>TC13710
Length = 451
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 19 TISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRH 78
T+ SL PTA+PT+ + H L P G++ P+P R +L+T++ H
Sbjct: 44 TLKFSLHSPTASPTLHSLTHSLMTHPP------------GTASPPHPQRPSTLFTQVITH 187
>BP044414
Length = 536
Score = 30.8 bits (68), Expect = 0.53
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -1
Query: 211 DVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLE 264
D+ S NA+I G+V G +A + F E+ ++ PD+ T +L+ + GDL+
Sbjct: 488 DLFSLNAIIKGFVNEGNLDEAKKWFGEIEKSENDPDKNTFATLVPFLCEKGDLK 327
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,475,560
Number of Sequences: 28460
Number of extensions: 115840
Number of successful extensions: 518
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of query: 495
length of database: 4,897,600
effective HSP length: 94
effective length of query: 401
effective length of database: 2,222,360
effective search space: 891166360
effective search space used: 891166360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC140033.4