BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140022.3 - phase: 0
(1079 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV776921 174 9e-44
TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 171 4e-43
BG662257 160 1e-39
BP039737 130 1e-30
BP055390 128 4e-30
AV411197 126 2e-29
BG662269 86 5e-29
TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proeti... 122 4e-28
BI417718 116 2e-26
AV418183 99 5e-21
AV413975 83 3e-16
CB829290 81 8e-16
BP075001 75 4e-14
AV768362 74 1e-13
CB828089 69 5e-12
TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance prote... 68 9e-12
TC19496 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, partia... 63 2e-10
AV767093 62 6e-10
AV777119 59 5e-09
AW720269 57 2e-08
>AV776921
Length = 435
Score = 174 bits (440), Expect = 9e-44
Identities = 90/144 (62%), Positives = 109/144 (75%)
Frame = +2
Query: 841 VNFSYPTRPDIQIFKDLTLSIPSAKTVALVGESGSGKSTVISLLERFYDPNSGRVLLDGV 900
V FSYP+RPD++I L L IPS K VALVG SGSGKSTVISL+ERFY+P SG +LLDG
Sbjct: 5 VCFSYPSRPDVEILNKLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGDILLDGN 184
Query: 901 DIKTFRISWLRQQMGLVGQEPILFNESIRANIAYGKEDGATEDEIIAAANAANAHNFISS 960
DI+ + WLRQQ+GLV QEP LF SI+ NI YGK D AT +E+ A ++A +FI++
Sbjct: 185 DIRDLDLKWLRQQIGLVNQEPALFATSIKENILYGK-DNATLEELKRAVKLSDAQSFINN 361
Query: 961 LPDGYDTSVGERGTQLSGGQKQRI 984
LP+ +T VGERG QLSGGQKQRI
Sbjct: 362 LPERLETQVGERGIQLSGGQKQRI 433
Score = 107 bits (266), Expect = 1e-23
Identities = 50/81 (61%), Positives = 66/81 (80%)
Frame = +2
Query: 369 DVHFRYPARPDVEIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPNAGEVLIDG 428
DV F YP+RPDVEI L +PSG ALVG SGSGKSTVISL+ERFY+P +G++L+DG
Sbjct: 2 DVCFSYPSRPDVEILNKLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGDILLDG 181
Query: 429 VNLKNLQLRWIREQIGLVSQE 449
++++L L+W+R+QIGLV+QE
Sbjct: 182 NDIRDLDLKWLRQQIGLVNQE 244
>TC11425 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(9%)
Length = 712
Score = 171 bits (434), Expect = 4e-43
Identities = 85/116 (73%), Positives = 101/116 (86%)
Frame = +2
Query: 964 GYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSL 1023
GYDT VGERGT LSGGQKQR+AIARA++K P ILLLDEATSALDAESER+VQ+ALD+V +
Sbjct: 71 GYDTVVGERGTLLSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVVQDALDKVMV 250
Query: 1024 NRTTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELMNNTHGVYASLVALHSTAS 1079
NRTTVIVAHRL+TI+ AD I V+KNG++ EKGRH+ L+N G YASLV LH+TA+
Sbjct: 251 NRTTVIVAHRLSTIKNADVITVLKNGVIVEKGRHETLINIKDGYYASLVQLHTTAT 418
Score = 129 bits (324), Expect = 2e-30
Identities = 64/104 (61%), Positives = 83/104 (79%)
Frame = +2
Query: 451 QNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILKRTTIVV 510
+ GT LSGGQKQR+AIARAI+K P ILLLDEATSALDAESE +VQ+AL+K+++ RTT++V
Sbjct: 92 ERGTLLSGGQKQRVAIARAIIKTPNILLLDEATSALDAESERVVQDALDKVMVNRTTVIV 271
Query: 511 AHRLTTIIHADTIAVVQQGKIVERGTHSELTMDPHGAYSQLIRL 554
AHRL+TI +AD I V++ G IVE+G H L G Y+ L++L
Sbjct: 272 AHRLSTIKNADVITVLKNGVIVEKGRHETLINIKDGYYASLVQL 403
>BG662257
Length = 336
Score = 160 bits (404), Expect = 1e-39
Identities = 80/104 (76%), Positives = 94/104 (89%)
Frame = +1
Query: 938 DGATEDEIIAAANAANAHNFISSLPDGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKIL 997
D ATE EIIAAA ANAH FISSL GYDT VG+RG QLSGGQKQR+AIARA++K+PKIL
Sbjct: 25 DAATEAEIIAAAELANAHKFISSLQQGYDTVVGDRGIQLSGGQKQRVAIARAIVKSPKIL 204
Query: 998 LLDEATSALDAESERIVQEALDRVSLNRTTVIVAHRLTTIRGAD 1041
LLDEATSALDAESE++VQ+ALDRV ++RTT++VAHRL+TI+GAD
Sbjct: 205 LLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGAD 336
Score = 103 bits (257), Expect = 1e-22
Identities = 53/69 (76%), Positives = 63/69 (90%)
Frame = +1
Query: 453 GTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILKRTTIVVAH 512
G QLSGGQKQR+AIARAI+K+PKILLLDEATSALDAESE +VQ+AL+++ + RTTIVVAH
Sbjct: 130 GIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAH 309
Query: 513 RLTTIIHAD 521
RL+TI AD
Sbjct: 310 RLSTIKGAD 336
>BP039737
Length = 543
Score = 130 bits (327), Expect = 1e-30
Identities = 67/168 (39%), Positives = 96/168 (56%)
Frame = +3
Query: 233 SMRTVASFTGEKKAIEKYNSKIKIAYTAMVQQSIASGIGMGTLLLIIFCSYGLAMWYGSK 292
S V S+ GE KA+ Y+ I+ + +A G+G+G I S+ L WY
Sbjct: 39 SSSNVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGV 218
Query: 293 LVIAKGYNGGTVMTVVIALVTGSMSLGQTSPSLHAFAAGKAAAYKMFETIKRKPKIDAYD 352
+ +GG T + + + G MSLGQ+ +L AF+ GKAA YK+ E IK+KP I
Sbjct: 219 FIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIIEDL 398
Query: 353 TSGLVLEDIKGDIELRDVHFRYPARPDVEIFAGFSLFVPSGTTTALVG 400
+ G L+++ G+IE +DV F YP+RPDV IF FS+F P+G T A+VG
Sbjct: 399 SDGKCLDEVNGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVG 542
Score = 73.9 bits (180), Expect = 1e-13
Identities = 38/117 (32%), Positives = 63/117 (53%)
Frame = +3
Query: 755 AFIFYIGSILVHHRKATFVEIFRVFFSLTMTAMSVSQSSTLFPDTNKAIDSAASIFNILD 814
A +F+ + + + + + F FS + MS+ QS + +K + + I+
Sbjct: 192 ALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 371
Query: 815 SKPDIDSSSNDGVTQETVVGNIELQHVNFSYPTRPDIQIFKDLTLSIPSAKTVALVG 871
KP I +DG + V GNIE + V FSYP+RPD+ IF++ ++ P+ KTVA+VG
Sbjct: 372 QKPTIIEDLSDGKCLDEVNGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVG 542
>BP055390
Length = 488
Score = 128 bits (322), Expect = 4e-30
Identities = 66/96 (68%), Positives = 79/96 (81%)
Frame = +3
Query: 445 LVSQERQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILK 504
L++Q Q G QLSGGQKQRIAIARAILKNP ILLLDEATSALD ESE +VQEALE +
Sbjct: 198 LLTQVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMHG 377
Query: 505 RTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSEL 540
RT I++AHRL+T+++AD IAVV+ G++VE GTH L
Sbjct: 378 RTVILIAHRLSTVVNADVIAVVENGQVVETGTHHTL 485
Score = 127 bits (319), Expect = 9e-30
Identities = 63/95 (66%), Positives = 76/95 (79%)
Frame = +3
Query: 967 TSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSLNRT 1026
T VG+RG QLSGGQKQRIAIARA+LKNP ILLLDEATSALD ESE++VQEAL+ RT
Sbjct: 204 TQVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMHGRT 383
Query: 1027 TVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELM 1061
+++AHRL+T+ AD IAV++NG V E G H L+
Sbjct: 384 VILIAHRLSTVVNADVIAVVENGQVVETGTHHTLL 488
>AV411197
Length = 391
Score = 126 bits (316), Expect = 2e-29
Identities = 67/113 (59%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Frame = +3
Query: 916 LVGQEPILFNESIRANIAYGKEDGATEDEIIAAANAANAHNFISSLPDGYDTSVGERGTQ 975
L+ QEPI+F+ +IR NI Y + + A+E E+ AA ANAH+FISSLP GYDT VG RG
Sbjct: 54 LIQQEPIIFSTTIRENIIYARHN-ASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVD 230
Query: 976 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSL-NRTT 1027
L+ GQKQRIAIAR +LKN ILLLDEA+S++++ES R++QEALD + + N+TT
Sbjct: 231 LTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKTT 389
Score = 65.5 bits (158), Expect = 4e-11
Identities = 31/55 (56%), Positives = 43/55 (77%)
Frame = +3
Query: 453 GTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILKRTT 507
G L+ GQKQRIAIAR +LKN ILLLDEA+S++++ES ++QEAL+ +I+ T
Sbjct: 222 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKT 386
>BG662269
Length = 283
Score = 85.9 bits (211), Expect(2) = 5e-29
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +2
Query: 901 DIKTFRISWLRQQMGLVGQEPILFNESIRANIAYGKEDGATEDEIIAAANAANAHN 956
+I+T ++ WLRQQMG+V QEP+LFNE+IRANIAYGK ATE EIIAAA ANAHN
Sbjct: 17 EIQTLQVKWLRQQMGMVSQEPVLFNETIRANIAYGKGGNATEAEIIAAAELANAHN 184
Score = 60.1 bits (144), Expect(2) = 5e-29
Identities = 29/34 (85%), Positives = 32/34 (93%)
Frame = +3
Query: 967 TSVGERGTQLSGGQKQRIAIARAMLKNPKILLLD 1000
T VGERG QLSGGQKQR+AIARA++KNPKILLLD
Sbjct: 180 TIVGERGIQLSGGQKQRVAIARAIVKNPKILLLD 281
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/47 (65%), Positives = 35/47 (73%)
Frame = +3
Query: 434 LQLRWIREQIGLVSQERQNGTQLSGGQKQRIAIARAILKNPKILLLD 480
LQ W Q+ + ER G QLSGGQKQR+AIARAI+KNPKILLLD
Sbjct: 156 LQQNW---QMPTIVGER--GIQLSGGQKQRVAIARAIVKNPKILLLD 281
Score = 30.4 bits (67), Expect = 1.6
Identities = 10/19 (52%), Positives = 18/19 (94%)
Frame = +2
Query: 431 LKNLQLRWIREQIGLVSQE 449
++ LQ++W+R+Q+G+VSQE
Sbjct: 20 IQTLQVKWLRQQMGMVSQE 76
>TC13598 similar to UP|Q9M1Q9 (Q9M1Q9) P-glycoprotein-like proetin, partial
(7%)
Length = 552
Score = 122 bits (305), Expect = 4e-28
Identities = 59/89 (66%), Positives = 75/89 (83%)
Frame = +3
Query: 991 LKNPKILLLDEATSALDAESERIVQEALDRVSLNRTTVIVAHRLTTIRGADTIAVIKNGM 1050
+K+P ILLLDE TSALD ESER+VQ+ALD+V +NRTTVIVAHRL+TI+ AD I V+KNG+
Sbjct: 3 IKSPNILLLDEXTSALDVESERVVQDALDKVMVNRTTVIVAHRLSTIKSADVIIVLKNGV 182
Query: 1051 VAEKGRHDELMNNTHGVYASLVALHSTAS 1079
+ EKGRH+ L++ G YASLV LH+TA+
Sbjct: 183 IVEKGRHETLISIKDGYYASLVQLHTTAT 269
Score = 95.5 bits (236), Expect = 4e-20
Identities = 46/84 (54%), Positives = 63/84 (74%)
Frame = +3
Query: 471 LKNPKILLLDEATSALDAESEHIVQEALEKIILKRTTIVVAHRLTTIIHADTIAVVQQGK 530
+K+P ILLLDE TSALD ESE +VQ+AL+K+++ RTT++VAHRL+TI AD I V++ G
Sbjct: 3 IKSPNILLLDEXTSALDVESERVVQDALDKVMVNRTTVIVAHRLSTIKSADVIIVLKNGV 182
Query: 531 IVERGTHSELTMDPHGAYSQLIRL 554
IVE+G H L G Y+ L++L
Sbjct: 183 IVEKGRHETLISIKDGYYASLVQL 254
>BI417718
Length = 515
Score = 116 bits (291), Expect = 2e-26
Identities = 63/131 (48%), Positives = 87/131 (66%)
Frame = +2
Query: 750 LYCTNAFIFYIGSILVHHRKATFVEIFRVFFSLTMTAMSVSQSSTLFPDTNKAIDSAASI 809
L+ A F++G+ V A+F ++F+V F+LTM A+ +S+ + P+++KA ASI
Sbjct: 131 LFSVYATTFHVGARFVGAGMASFSDVFQVLFALTMAAIGISRRA---PNSSKAKIVTASI 301
Query: 810 FNILDSKPDIDSSSNDGVTQETVVGNIELQHVNFSYPTRPDIQIFKDLTLSIPSAKTVAL 869
F I+D K ID G T ++ G IE HV+F YP+RPDIQIF DL+L+I + TVAL
Sbjct: 302 FEIIDRKSKIDPCDESGSTLDSTKGKIEFCHVSFKYPSRPDIQIFPDLSLTIHAGTTVAL 481
Query: 870 VGESGSGKSTV 880
VGESGSGKSTV
Sbjct: 482 VGESGSGKSTV 514
Score = 109 bits (273), Expect = 2e-24
Identities = 62/162 (38%), Positives = 89/162 (54%)
Frame = +2
Query: 248 EKYNSKIKIAYTAMVQQSIASGIGMGTLLLIIFCSYGLAMWYGSKLVIAKGYNGGTVMTV 307
E Y+ K + +Q+ + SGIG G ++F Y G++ V A + V V
Sbjct: 38 ELYSRKCEGPVKTGIQRGLISGIGFGVSFFLLFSVYATTFHVGARFVGAGMASFSDVFQV 217
Query: 308 VIALVTGSMSLGQTSPSLHAFAAGKAAAYKMFETIKRKPKIDAYDTSGLVLEDIKGDIEL 367
+ AL ++ + + +P+ + K +FE I RK KID D SG L+ KG IE
Sbjct: 218 LFALTMAAIGISRRAPNS---SKAKIVTASIFEIIDRKSKIDPCDESGSTLDSTKGKIEF 388
Query: 368 RDVHFRYPARPDVEIFAGFSLFVPSGTTTALVGQSGSGKSTV 409
V F+YP+RPD++IF SL + +GTT ALVG+SGSGKSTV
Sbjct: 389 CHVSFKYPSRPDIQIFPDLSLTIHAGTTVALVGESGSGKSTV 514
>AV418183
Length = 298
Score = 98.6 bits (244), Expect = 5e-21
Identities = 53/98 (54%), Positives = 64/98 (65%)
Frame = +3
Query: 899 GVDIKTFRISWLRQQMGLVGQEPILFNESIRANIAYGKEDGATEDEIIAAANAANAHNFI 958
GV + L +++ +V QEP LFN SI NIAYG + +I AA ANAH FI
Sbjct: 3 GVPLAEISHRHLHRKISIVSQEPTLFNCSIEENIAYGFDGKLNSVDIENAAKMANAHEFI 182
Query: 959 SSLPDGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKI 996
S P+ Y T VGERG +LSGGQKQRIAIARA+L +PKI
Sbjct: 183 SKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKI 296
Score = 41.6 bits (96), Expect = 7e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 451 QNGTQLSGGQKQRIAIARAILKNPKI 476
+ G +LSGGQKQRIAIARA+L +PKI
Sbjct: 219 ERGVRLSGGQKQRIAIARALLMDPKI 296
>AV413975
Length = 343
Score = 82.8 bits (203), Expect = 3e-16
Identities = 44/113 (38%), Positives = 65/113 (56%)
Frame = +2
Query: 788 SVSQSSTLFPDTNKAIDSAASIFNILDSKPDIDSSSNDGVTQETVVGNIELQHVNFSYPT 847
S+S S L+ KA ++ +F I+D + S + G +EL V FSYP+
Sbjct: 8 SISGLSGLYTVVMKAAGASRRVFQIMDRVSSMSKSGTKCPLGDQD-GEVELDDVWFSYPS 184
Query: 848 RPDIQIFKDLTLSIPSAKTVALVGESGSGKSTVISLLERFYDPNSGRVLLDGV 900
RP + K +T+ + VALVG SG GK+T+ +L+ERFYDP G++LL+GV
Sbjct: 185 RPSHPVLKGITMKLHPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGV 343
Score = 77.0 bits (188), Expect = 1e-14
Identities = 41/101 (40%), Positives = 63/101 (61%)
Frame = +2
Query: 329 AAGKAAAYKMFETIKRKPKIDAYDTSGLVLEDIKGDIELRDVHFRYPARPDVEIFAGFSL 388
AAG A+ ++F+ + R + T L D G++EL DV F YP+RP + G ++
Sbjct: 50 AAG--ASRRVFQIMDRVSSMSKSGTK-CPLGDQDGEVELDDVWFSYPSRPSHPVLKGITM 220
Query: 389 FVPSGTTTALVGQSGSGKSTVISLLERFYDPNAGEVLIDGV 429
+ G+ ALVG SG GK+T+ +L+ERFYDP G++L++GV
Sbjct: 221 KLHPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGV 343
>CB829290
Length = 546
Score = 81.3 bits (199), Expect = 8e-16
Identities = 37/108 (34%), Positives = 70/108 (64%)
Frame = -3
Query: 445 LVSQERQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIILK 504
L S +NG S GQ+Q + + R +LK K+L+LDEAT+++D +++++Q+ L + +
Sbjct: 532 LDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSE 353
Query: 505 RTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSELTMDPHGAYSQLI 552
T I +AHR+T++I +D + ++ QG I E + ++L D +++QL+
Sbjct: 352 STVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLV 209
Score = 76.6 bits (187), Expect = 2e-14
Identities = 34/108 (31%), Positives = 66/108 (60%)
Frame = -3
Query: 966 DTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSLNR 1025
D++V E G S GQ+Q + + R +LK K+L+LDEAT+++D ++ ++Q+ L +
Sbjct: 529 DSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSES 350
Query: 1026 TTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELMNNTHGVYASLVA 1073
T + +AHR+T++ +D + ++ G++ E +L+ + +A LVA
Sbjct: 349 TVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLVA 206
>BP075001
Length = 403
Score = 75.5 bits (184), Expect = 4e-14
Identities = 41/135 (30%), Positives = 71/135 (52%)
Frame = +2
Query: 224 GNVANQTVGSMRTVASFTGEKKAIEKYNSKIKIAYTAMVQQSIASGIGMGTLLLIIFCSY 283
G+VA Q + S+RTV + EK+ + +++S ++ + ++Q G+ +G++ L+ + ++
Sbjct: 2 GSVAEQCISSIRTVYPYVSEKQTLNRFSSALEKSMELGIKQGQTKGVVIGSIGLL-YATW 178
Query: 284 GLAMWYGSKLVIAKGYNGGTVMTVVIALVTGSMSLGQTSPSLHAFAAGKAAAYKMFETIK 343
W GS LV KG +GG V I ++ G +SL P L A ++ E I
Sbjct: 179 AFQSWAGSVLVRTKGESGGQVFVAQICIIWGGISLMSALPKLAFIIEASVAGTRIIEMID 358
Query: 344 RKPKIDAYDTSGLVL 358
RKP I+A G +L
Sbjct: 359 RKPSINANGEKGRLL 403
>AV768362
Length = 541
Score = 73.9 bits (180), Expect = 1e-13
Identities = 34/65 (52%), Positives = 52/65 (79%)
Frame = -2
Query: 1008 AESERIVQEALDRVSLNRTTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELMNNTHGV 1067
AESE +VQ+A+D + RT +++AHRL+T++ A+T+ VI +G VAEKG HDEL++ +GV
Sbjct: 540 AESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVVVISDGQVAEKGTHDELLSQ-NGV 364
Query: 1068 YASLV 1072
Y++LV
Sbjct: 363 YSALV 349
Score = 69.7 bits (169), Expect = 2e-12
Identities = 31/68 (45%), Positives = 51/68 (74%)
Frame = -2
Query: 488 AESEHIVQEALEKIILKRTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSELTMDPHGA 547
AESE++VQ+A++ I+ RT +V+AHRL+T+ A+T+ V+ G++ E+GTH EL + +G
Sbjct: 540 AESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVVVISDGQVAEKGTHDEL-LSQNGV 364
Query: 548 YSQLIRLQ 555
YS L++ Q
Sbjct: 363 YSALVKRQ 340
>CB828089
Length = 511
Score = 68.6 bits (166), Expect = 5e-12
Identities = 36/109 (33%), Positives = 60/109 (55%)
Frame = +1
Query: 964 GYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSL 1023
G D+SV E G S GQ+Q + RA+L+ +IL+LDEAT+++D ++ I+Q+ +
Sbjct: 46 GLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFA 225
Query: 1024 NRTTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELMNNTHGVYASLV 1072
+ T + VAHR+ T+ + I +G + E LM ++ LV
Sbjct: 226 DCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLV 372
Score = 66.2 bits (160), Expect = 3e-11
Identities = 34/110 (30%), Positives = 60/110 (53%)
Frame = +1
Query: 444 GLVSQERQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESEHIVQEALEKIIL 503
GL S ++G S GQ+Q + RA+L+ +IL+LDEAT+++D ++ I+Q+ +
Sbjct: 46 GLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFA 225
Query: 504 KRTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSELTMDPHGAYSQLIR 553
T I VAHR+ T++ + + GK+VE L + +L++
Sbjct: 226 DCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVK 375
>TC11559 similar to UP|Q9SXT3 (Q9SXT3) Multidrug resistance protein
(Fragment), partial (41%)
Length = 460
Score = 67.8 bits (164), Expect = 9e-12
Identities = 36/98 (36%), Positives = 56/98 (56%), Gaps = 3/98 (3%)
Frame = +3
Query: 851 IQIFKDLTLSIPSAKTVALVGESGSGKSTVISLLERFYDPNSGRVLLDGVDIKTFRISWL 910
+ I K + L IP V ++G SGSGKST++ L R ++P S V LD DI + L
Sbjct: 129 VPILKGIHLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDARDICHLDVLSL 308
Query: 911 RQQMGLVGQEPILFNESIRANIAYGKE---DGATEDEI 945
R+++G++ Q P LF ++ N+ YG + T+DE+
Sbjct: 309 RRKVGMLFQLPALFEGTVADNVRYGPQLRGQKLTDDEV 422
Score = 52.0 bits (123), Expect = 5e-07
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +3
Query: 380 VEIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPNAGEVLIDGVNLKNLQLRWI 439
V I G L +P G ++G SGSGKST++ L R ++P + V +D ++ +L + +
Sbjct: 129 VPILKGIHLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDARDICHLDVLSL 308
Query: 440 REQIGLVSQ 448
R ++G++ Q
Sbjct: 309 RRKVGMLFQ 335
>TC19496 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, partial (10%)
Length = 571
Score = 63.2 bits (152), Expect = 2e-10
Identities = 33/72 (45%), Positives = 48/72 (65%)
Frame = +3
Query: 1007 DAESERIVQEALDRVSLNRTTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELMNNTHG 1066
D SER+VQ+AL+ + RTT+++AHRL+T++ A IA+ +G +AE+G H EL+ G
Sbjct: 3 DTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSDGRIAEQGTHFELLAK-KG 179
Query: 1067 VYASLVALHSTA 1078
YASLV A
Sbjct: 180 QYASLVGTQRLA 215
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/69 (44%), Positives = 46/69 (65%)
Frame = +3
Query: 487 DAESEHIVQEALEKIILKRTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSELTMDPHG 546
D SE +VQ+AL ++ RTT+V+AHRL+T+ +A IA+ G+I E+GTH EL + G
Sbjct: 3 DTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSDGRIAEQGTHFEL-LAKKG 179
Query: 547 AYSQLIRLQ 555
Y+ L+ Q
Sbjct: 180 QYASLVGTQ 206
>AV767093
Length = 603
Score = 61.6 bits (148), Expect = 6e-10
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 363 GDIELRDVHFRYPARPDVE-IFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPNA 421
G IEL + RY RP+ + G SL V G +VG++GSGKST+I +L R +P+A
Sbjct: 379 GSIELNSLQVRY--RPNTPLVLKGISLTVQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSA 552
Query: 422 GEVLIDGVNLKNLQL 436
G+++IDG+N+ L L
Sbjct: 553 GKIIIDGINICTLGL 597
Score = 55.5 bits (132), Expect = 5e-08
Identities = 26/72 (36%), Positives = 49/72 (67%), Gaps = 1/72 (1%)
Frame = +1
Query: 834 GNIELQHVNFSYPTRPDIQ-IFKDLTLSIPSAKTVALVGESGSGKSTVISLLERFYDPNS 892
G+IEL + Y RP+ + K ++L++ + + +VG +GSGKST+I +L R +P++
Sbjct: 379 GSIELNSLQVRY--RPNTPLVLKGISLTVQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSA 552
Query: 893 GRVLLDGVDIKT 904
G++++DG++I T
Sbjct: 553 GKIIIDGINICT 588
>AV777119
Length = 447
Score = 58.5 bits (140), Expect = 5e-09
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -1
Query: 501 IILKRTTIVVAHRLTTIIHADTIAVVQQGKIVERGTHSE-LTMDPHGAYSQLIRLQ 555
+++ RT++VVAHRL+TI + D IAV+ +G++VE+G+HS L P GAY L+ LQ
Sbjct: 447 VMVGRTSVVVAHRLSTIQNCDLIAVLDKGRVVEKGSHSNLLAKGPSGAYYSLVSLQ 280
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -1
Query: 1021 VSLNRTTVIVAHRLTTIRGADTIAVIKNGMVAEKGRHDELM-NNTHGVYASLVALHSTAS 1079
V + RT+V+VAHRL+TI+ D IAV+ G V EKG H L+ G Y SLV+L S
Sbjct: 447 VMVGRTSVVVAHRLSTIQNCDLIAVLDKGRVVEKGSHSNLLAKGPSGAYYSLVSLQRRPS 268
>AW720269
Length = 524
Score = 56.6 bits (135), Expect = 2e-08
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Frame = +3
Query: 851 IQIFKDLTLSIPSAKTVALVGESGSGKSTVISLLERFYDPNSGRVLLDGVDIKTFRIS-- 908
+ I K ++ S++ VA+VG SG+GKST++ ++ +GRV D KT I+
Sbjct: 48 VNILKSVSFVARSSEIVAVVGPSGTGKSTLLRII-------AGRVKDRDFDPKTISINDH 206
Query: 909 ------WLRQQMGLVGQE----PIL-FNESIRANIAYGKEDGATEDEIIAAANAANAHNF 957
LR+ G V QE P+L E++ + + ++ D + +
Sbjct: 207 PMTSPAQLRKICGFVAQEDNLLPLLTVKETLLFSAKFRLKEMTPNDREMRVESLMQELGL 386
Query: 958 ISSLPDGYDTSVG-ERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSAL 1006
D+ VG E +SGG+++R++I M+ NP ILLLDE TS L
Sbjct: 387 FHVS----DSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGL 524
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/170 (24%), Positives = 68/170 (39%), Gaps = 54/170 (31%)
Frame = +3
Query: 371 HFRYPARPDVEIFAGFSLFVPSGTTTALVGQSGSGKSTVISLL-----ERFYDPNA---- 421
H +P V I S S A+VG SG+GKST++ ++ +R +DP
Sbjct: 24 HLTQKPKP-VNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDRDFDPKTISIN 200
Query: 422 -----------------------------GEVLIDGV---------NLKNLQLRWIREQI 443
E L+ N + +++ + +++
Sbjct: 201 DHPMTSPAQLRKICGFVAQEDNLLPLLTVKETLLFSAKFRLKEMTPNDREMRVESLMQEL 380
Query: 444 GL-------VSQERQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSAL 486
GL V E G +SGG+++R++I ++ NP ILLLDE TS L
Sbjct: 381 GLFHVSDSFVGDEENRG--ISGGERKRVSIGVDMIHNPPILLLDEPTSGL 524
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.134 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,696,650
Number of Sequences: 28460
Number of extensions: 171646
Number of successful extensions: 1019
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of query: 1079
length of database: 4,897,600
effective HSP length: 100
effective length of query: 979
effective length of database: 2,051,600
effective search space: 2008516400
effective search space used: 2008516400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC140022.3