Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139600.8 + phase: 0 
         (318 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NP675423 transcription factor MYB101 [Lotus japonicus]                188  9e-49
NP675421 transcription factor MYB103 [Lotus japonicus]                178  1e-45
TC11120 UP|Q84PP4 (Q84PP4) Transcription factor MYB102, complete      116  3e-43
AV408163                                                              167  3e-42
TC20215 similar to AAS10104 (AAS10104) MYB transcription factor,...   166  4e-42
CN824947                                                              164  2e-41
TC10416 weakly similar to UP|O04108 (O04108) MYB factor, partial...   160  2e-40
AV417320                                                              158  1e-39
AV766688                                                              156  4e-39
AV421932                                                              147  3e-36
TC19713 homologue to UP|P93474 (P93474) Myb26, partial (55%)          144  3e-35
AV413379                                                              142  6e-35
CB828471                                                              118  2e-27
BP034046                                                              113  4e-26
TC8520 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucros...   108  9e-25
TC9457 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucros...   107  3e-24
TC17948 similar to UP|Q9FZ13 (Q9FZ13) Tuber-specific and sucrose...   104  2e-23
TC18881 similar to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucrose...   102  1e-22
BI420780                                                               93  7e-20
TC17769 similar to UP|Q40175 (Q40175) Transcription factor, part...    68  2e-12

>NP675423 transcription factor MYB101 [Lotus japonicus]
          Length = 1047

 Score =  188 bits (478), Expect = 9e-49
 Identities = 82/119 (68%), Positives = 102/119 (84%)
 Frame = +1

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCCD+ G+KKGPWTPEED ILV YIQ+HG G+W+A+P   GL RC KSCRLRWTNY
Sbjct: 1   MGRTPCCDEIGLKKGPWTPEEDAILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNY 180

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
           LRP IKRG FT++EE++II+L A+LGN+W+AIA +LP RTDN+IKN+WNT+LKKKL ++
Sbjct: 181 LRPDIKRGKFTEEEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQM 357


>NP675421 transcription factor MYB103 [Lotus japonicus]
          Length = 924

 Score =  178 bits (451), Expect = 1e-45
 Identities = 79/120 (65%), Positives = 99/120 (81%)
 Frame = +1

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M+R P  D+ G+KKGPW+ EED +LV YIQ+HG G+W+A+P   GL RC KSCRLRWTNY
Sbjct: 1   MMRTPSIDESGMKKGPWSQEEDKVLVDYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTNY 180

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
           LRP IKRG F+D+EE++II+L A LGN+WA IA++LP RTDN+IKN WNT+LKKKLK L+
Sbjct: 181 LRPDIKRGKFSDEEEQLIINLHASLGNKWATIASHLPGRTDNEIKNLWNTHLKKKLKLLQ 360


>TC11120 UP|Q84PP4 (Q84PP4) Transcription factor MYB102, complete
          Length = 1281

 Score =  116 bits (291), Expect(2) = 3e-43
 Identities = 50/74 (67%), Positives = 59/74 (79%)
 Frame = +1

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCCD+ G+KKGPWTPEED  LV +IQ+HG G+W+A+P   GL RC KSCRLRWTNY
Sbjct: 67  MGRSPCCDENGLKKGPWTPEEDQKLVEHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNY 246

Query: 61  LRPGIKRGNFTDQE 74
           LRP IKRG F+ +E
Sbjct: 247 LRPDIKRGKFSPEE 288



 Score = 75.1 bits (183), Expect(2) = 3e-43
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = +2

Query: 68  GNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
           GNF  ++E+ I+HL ++LGN+W+ IA +LP RTDN+IKN+WNT+LKKKL
Sbjct: 269 GNFLQKKEQTILHLHSILGNKWSTIATHLPGRTDNEIKNFWNTHLKKKL 415


>AV408163 
          Length = 425

 Score =  167 bits (422), Expect = 3e-42
 Identities = 71/116 (61%), Positives = 92/116 (79%)
 Frame = +2

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCC+K  + KG WT EED  L+SYI+ HG G W+++P   GLLRC KSCRLRW NY
Sbjct: 77  MGRSPCCEKAHINKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 256

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
           LRP +KRGNFT++E+++II L +LLGN+W+ IA  LP RTDN+IKNYWNT++++KL
Sbjct: 257 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 424


>TC20215 similar to AAS10104 (AAS10104) MYB transcription factor, partial
           (35%)
          Length = 464

 Score =  166 bits (421), Expect = 4e-42
 Identities = 72/137 (52%), Positives = 101/137 (73%)
 Frame = +2

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCC+K G+K+G W+ EED IL  +I+++G G+WK++P N GLLRC KSCRLRW NY
Sbjct: 29  MGRAPCCEKVGLKRGRWSEEEDKILTDFIKQNGEGSWKSLPKNAGLLRCGKSCRLRWINY 208

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
           LR  +KRGN T +EE++I+ L A LGNRW+ IA +LP RTDN+IKNYWN++L++K+    
Sbjct: 209 LREDVKRGNITSEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFM 388

Query: 121 TSTSSESCLGHDEFSVS 137
            S + +  L   + +V+
Sbjct: 389 RSLNDQQSLPPIDMNVA 439


>CN824947 
          Length = 738

 Score =  164 bits (414), Expect = 2e-41
 Identities = 69/116 (59%), Positives = 90/116 (77%)
 Frame = +1

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCC+K G+K+G WT EED +L  YIQ  G G+W+++P N GLLRC KSCRLRW NY
Sbjct: 151 MGRAPCCEKVGLKRGRWTAEEDELLTKYIQASGEGSWRSLPKNAGLLRCGKSCRLRWINY 330

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
           LR  +KRGN +D+EE +I+ L A  GNRW+ IA+++P RTDN+IKNYWN++L +KL
Sbjct: 331 LRGDLKRGNISDEEESLIVKLHASFGNRWSLIASHMPGRTDNEIKNYWNSHLSRKL 498


>TC10416 weakly similar to UP|O04108 (O04108) MYB factor, partial (41%)
          Length = 1046

 Score =  160 bits (406), Expect = 2e-40
 Identities = 87/201 (43%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
 Frame = +2

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R P CDK G++KG WT EED  L++Y+  +G  NW+ +P   GL RC KSCRLRW NY
Sbjct: 92  MARTPSCDKSGMRKGTWTAEEDKKLIAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWLNY 271

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
           LRP IKRGNFT +EE++II +   LGNRW+ IAA LP RTD+++KN+W+T LK+ + +  
Sbjct: 272 LRPNIKRGNFTQEEEEIIIRMHKKLGNRWSTIAAELPGRTDSEVKNHWHTTLKRTVHEQN 451

Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMLPLE 180
           T T+ E+ + + + +   P+ +      L T              P  +TS S  +  L 
Sbjct: 452 TVTNEETKVSNSK-NERDPVPKSGIASLLVT--------------PPPATSISGSIGAL- 583

Query: 181 SNFSSESSF-CSTKPTTQSLS 200
           S FS+ S F C+T   T S S
Sbjct: 584 SPFSTSSEFSCTTSDLTTSSS 646


>AV417320 
          Length = 369

 Score =  158 bits (399), Expect = 1e-39
 Identities = 70/97 (72%), Positives = 82/97 (84%)
 Frame = +3

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           MVR PCC+K G+KKGPWT EED IL+SYIQ+HG GNW+A+P + GLLRC KSCRLRW NY
Sbjct: 78  MVRAPCCEKIGLKKGPWTSEEDQILISYIQKHGHGNWRALPKHAGLLRCGKSCRLRWINY 257

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLP 97
           LRP IKRGNFT +EE++II +  LLGNRW+AIAA LP
Sbjct: 258 LRPDIKRGNFTAEEEELIIKMHELLGNRWSAIAAKLP 368


>AV766688 
          Length = 608

 Score =  156 bits (395), Expect = 4e-39
 Identities = 69/127 (54%), Positives = 93/127 (72%)
 Frame = +2

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R P CDK G++KG WT EED  L++Y+  +G  NW+ +P   GL RC KSCRLRW NY
Sbjct: 77  MARTPSCDKSGLRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWLNY 256

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
           LRP IKRG+FT +EE++II +   LGNRW+ IAA LP RTDN++KN+W+T LK+++++ E
Sbjct: 257 LRPDIKRGHFTQEEEEIIIRMHKNLGNRWSIIAAELPGRTDNEVKNHWHTSLKRRVQQNE 436

Query: 121 TSTSSES 127
            +  S S
Sbjct: 437 EAKVSNS 457


>AV421932 
          Length = 402

 Score =  147 bits (370), Expect = 3e-36
 Identities = 64/103 (62%), Positives = 78/103 (75%)
 Frame = +3

Query: 6   CCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGI 65
           CC+++ VK+G W+PEED  L+ YI  HG G W  VP   GL RC KSCRLRW NYLRP I
Sbjct: 93  CCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDI 272

Query: 66  KRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYW 108
           +RG FT +EEK+II L  ++GNRWA IA++LP RTDN+IKNYW
Sbjct: 273 RRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYW 401


>TC19713 homologue to UP|P93474 (P93474) Myb26, partial (55%)
          Length = 532

 Score =  144 bits (362), Expect = 3e-35
 Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 5/143 (3%)
 Frame = +3

Query: 1   MVRPPCCDKEG--VKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWT 58
           M + PC       V+KGPWT EED+IL++YI  HG G W  +  + GL R  KSCRLRW 
Sbjct: 66  MDKKPCNSSHDPEVRKGPWTIEEDLILINYIANHGEGVWNTLAKSAGLKRTGKSCRLRWL 245

Query: 59  NYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKK 118
           NYLRP ++RGN T +E+ +I+ L A  GNRW+ IA +LP RTDN+IKN+W T ++K +K+
Sbjct: 246 NYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQ 425

Query: 119 ---LETSTSSESCLGHDEFSVSQ 138
              L+   SS     H + S SQ
Sbjct: 426 AESLQQQQSSSEINDHHQTSTSQ 494


>AV413379 
          Length = 416

 Score =  142 bits (359), Expect = 6e-35
 Identities = 63/105 (60%), Positives = 79/105 (75%)
 Frame = +3

Query: 1   MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
           M R PCC+K    KG WT EED  L++YI+ HG G W+++P + GLLRC KSCRLRW NY
Sbjct: 102 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKSAGLLRCGKSCRLRWINY 281

Query: 61  LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIK 105
           LRP +KRGNFT QE+++II L +LLGN+W+ IA  L  RTDN+IK
Sbjct: 282 LRPDLKRGNFTPQEDELIIKLHSLLGNKWSLIAGRLAGRTDNEIK 416


>CB828471 
          Length = 525

 Score =  118 bits (295), Expect = 2e-27
 Identities = 54/77 (70%), Positives = 63/77 (81%)
 Frame = +1

Query: 41  PTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRT 100
           P   GLLRC KSCRLRW NYLRP IKRGNF+ +EE  II+L  LLGNRW+AIAA LP RT
Sbjct: 1   PKQAGLLRCGKSCRLRWANYLRPDIKRGNFSREEEDEIINLHELLGNRWSAIAARLPGRT 180

Query: 101 DNDIKNYWNTYLKKKLK 117
           DN+IKN W+T+LKK+L+
Sbjct: 181 DNEIKNVWHTHLKKRLQ 231


>BP034046 
          Length = 490

 Score =  113 bits (283), Expect = 4e-26
 Identities = 69/118 (58%), Positives = 82/118 (69%), Gaps = 7/118 (5%)
 Frame = -2

Query: 206 DNIARLLKGWMKNKPKEGSNGNNTNVTQNYETSASSEG---MEKGSTS-VELSETFESLF 261
           DNIARLLKGWMK  PK GS     N     +T ++SEG   + KGS + VEL+ETFESLF
Sbjct: 489 DNIARLLKGWMKKSPK-GSCSKTLN-----DTDSTSEGYSIVAKGSNNCVELNETFESLF 328

Query: 262 GY-ESFDSSNSDS--TTLFQDESKPENIGEIMPFSMLEKWLLDDGACQEKVGLSEINY 316
           GY ES DS NS+S   TLFQDESKP  +G  MPFS+LE+WLLDD   QEK+ L + N+
Sbjct: 327 GYNESLDSLNSESPEATLFQDESKPAGVGAEMPFSLLEQWLLDDAGYQEKLSLLQ*NH 154


>TC8520 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and
           sucrose-responsive element binding factor, partial (36%)
          Length = 1778

 Score =  108 bits (271), Expect = 9e-25
 Identities = 57/133 (42%), Positives = 76/133 (56%), Gaps = 4/133 (3%)
 Frame = +1

Query: 14  KGPWTPEEDIILVSYIQEHGPGNW----KAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGN 69
           KGPW+PEED  L   ++ HGP NW    K++P  +G     KSCRLRW N L P ++   
Sbjct: 184 KGPWSPEEDEALQKLVERHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRA 348

Query: 70  FTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCL 129
           FT +E+  II   A  GN+WA IA  L  RTDN IKN+WN+ LK+K   +  +    +  
Sbjct: 349 FTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIFAADDLAAGG 528

Query: 130 GHDEFSVSQPIAR 142
           G  +F   QP+ R
Sbjct: 529 GGGDF-CPQPLKR 564


>TC9457 homologue to UP|Q9FZ15 (Q9FZ15) Tuber-specific and
           sucrose-responsive element binding factor, partial (43%)
          Length = 860

 Score =  107 bits (266), Expect = 3e-24
 Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
 Frame = +3

Query: 14  KGPWTPEEDIILVSYIQEHGPGNW----KAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGN 69
           KGPW+PEED  L   +++HGP NW    K++P  +G     KSCRLRW N L P ++   
Sbjct: 78  KGPWSPEEDEALQRLVEKHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRA 242

Query: 70  FTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKK 115
           FT +E+  II   A  GN+WA IA  L  RTDN IKN+WN+ LK+K
Sbjct: 243 FTAEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 380


>TC17948 similar to UP|Q9FZ13 (Q9FZ13) Tuber-specific and sucrose-responsive
           element binding factor, partial (50%)
          Length = 487

 Score =  104 bits (259), Expect = 2e-23
 Identities = 50/103 (48%), Positives = 65/103 (62%)
 Frame = +2

Query: 14  KGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQ 73
           KGPW+ EED IL   ++ HG  NW  +       R  KSCRLRW N L P ++   F+ Q
Sbjct: 170 KGPWSAEEDRILTRLVERHGARNWSLISRYIKG-RSGKSCRLRWCNQLSPTVEHRPFSVQ 346

Query: 74  EEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
           E++ II   A  GNRWAAIA  LP RTDN +KN+WN+ LK+++
Sbjct: 347 EDETIIAAHARFGNRWAAIARLLPGRTDNAVKNHWNSTLKRRV 475


>TC18881 similar to UP|Q9FZ15 (Q9FZ15) Tuber-specific and sucrose-responsive
           element binding factor, partial (28%)
          Length = 346

 Score =  102 bits (253), Expect = 1e-22
 Identities = 48/97 (49%), Positives = 60/97 (61%)
 Frame = +1

Query: 14  KGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQ 73
           KGPW+PEED  L   +Q HGP NW A+  +    R  KSCRLRW N L P ++   FT +
Sbjct: 55  KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG-RSGKSCRLRWCNQLSPEVEHRPFTPE 231

Query: 74  EEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNT 110
           E+  II   A  GN+WA IA  L  RTDN +KN+WN+
Sbjct: 232 EDSTIIRAHARCGNKWATIARILNGRTDNAVKNHWNS 342


>BI420780 
          Length = 475

 Score = 92.8 bits (229), Expect = 7e-20
 Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
 Frame = +1

Query: 17  WTPEEDIILVSYIQEHGPGNWKAVPT--NTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQE 74
           W+ EED +L +Y+Q++GP  W  V    NT L R +KSC  RW NYL+PGIK+G+ T +E
Sbjct: 211 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 390

Query: 75  EKMIIHLQALLGNRWAAIAAYLPQRT 100
           ++++I LQA  GN+W  IAA +P RT
Sbjct: 391 QRLVILLQANYGNKWKKIAAEVPGRT 468


>TC17769 similar to UP|Q40175 (Q40175) Transcription factor, partial (8%)
          Length = 545

 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 43/83 (51%), Positives = 52/83 (61%), Gaps = 5/83 (6%)
 Frame = +2

Query: 225 NGNNTNVTQNYETSASSEGMEK-GSTSVELSETFESLFGYESFDSSNSD--STTLFQDES 281
           N  N N+      +ASS G +   STS ELSETFESLFG+ES +S NSD  S +    E 
Sbjct: 23  NSFNYNLNAAGTDTASSSGAKGISSTSAELSETFESLFGFESLESPNSDQFSPSNLSPER 202

Query: 282 KPE--NIGEIMPFSMLEKWLLDD 302
           KP+   IG  MP S+LEKWLLD+
Sbjct: 203 KPDVNVIGPEMPLSLLEKWLLDE 271


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.311    0.128    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,035,795
Number of Sequences: 28460
Number of extensions: 83090
Number of successful extensions: 423
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of query: 318
length of database: 4,897,600
effective HSP length: 90
effective length of query: 228
effective length of database: 2,336,200
effective search space: 532653600
effective search space used: 532653600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)


Medicago: description of AC139600.8