BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.7 - phase: 0
(320 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC7966 similar to UP|Q84V25 (Q84V25) Quinone oxidoreductase, par... 468 e-133
TC18928 similar to UP|Q43677 (Q43677) Auxin-induced protein, par... 242 5e-65
BP038982 218 1e-57
TC8579 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial ... 212 8e-56
BP038466 117 3e-27
AV771699 115 1e-26
TC9889 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1 ... 100 3e-22
AV767419 100 4e-22
CB828208 88 7e-21
AW719877 91 3e-19
AV773204 67 7e-15
TC17336 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial... 76 9e-15
BI420064 74 4e-14
TC19020 71 2e-13
CB828515 69 1e-12
TC8042 homologue to UP|P93619 (P93619) Probable NADP-dependent o... 68 2e-12
TC8891 similar to GB|AAP68279.1|31711846|BT008840 At1g72680 {Ara... 62 1e-10
BP038362 60 6e-10
AV415744 57 4e-09
TC17332 similar to UP|MTD_FRAAN (Q9ZRF1) Probable mannitol dehyd... 55 2e-08
>TC7966 similar to UP|Q84V25 (Q84V25) Quinone oxidoreductase, partial (98%)
Length = 1908
Score = 468 bits (1203), Expect = e-133
Identities = 235/320 (73%), Positives = 266/320 (82%), Gaps = 1/320 (0%)
Frame = +2
Query: 2 ASTPSIPSHTKAWVYSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRALG 61
+S +IP+H KAW YS+YG +ILKFD NVP P KED VLIKVVAAALNP+D KR
Sbjct: 707 SSMAAIPTHIKAWTYSEYGKSTDILKFDPNVPLPELKEDHVLIKVVAAALNPIDYKRMEA 886
Query: 62 HFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNPKTIGTLSEYTV 121
FKD DSPLPT PGYDVAGVVV VG +VKKFKVGDEVYGDINE L PK +G+L+EYT
Sbjct: 887 LFKDTDSPLPTAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINENALEYPKVVGSLAEYTA 1066
Query: 122 AEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERVEFSSGKSLLVLGGAGGVGSLVIQLA 181
EEK+LAHKP NLSFVEAASLPLAI TAY+GLER FS+GKS+LVLGGAGGVG+ VIQLA
Sbjct: 1067 VEEKLLAHKPKNLSFVEAASLPLAIETAYEGLERAGFSAGKSILVLGGAGGVGTHVIQLA 1246
Query: 182 KHVFEASRIAATASTTKLDFLRKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERAVKA 241
KHVF AS++AAT+ST KL+ LRKLGAD+ IDYTKEN E L EKFDVV+DAVGD++ K
Sbjct: 1247 KHVFGASKVAATSSTGKLELLRKLGADMPIDYTKENVENLPEKFDVVFDAVGDADTTFKP 1426
Query: 242 ANEGGKVVTILPPG-TPPAIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFYQTLE 300
EGGK VTI+PP PPAI ++L SDGAVLEKL+PYLE+GKVKPILDPKSPFPF QT+E
Sbjct: 1427 LKEGGKFVTIVPPALPPPAIYYILKSDGAVLEKLKPYLESGKVKPILDPKSPFPFSQTVE 1606
Query: 301 AFSYLNTNRAIGKIVIHPIP 320
AFSYL TNRA+GK+VIHPIP
Sbjct: 1607 AFSYLETNRAVGKVVIHPIP 1666
>TC18928 similar to UP|Q43677 (Q43677) Auxin-induced protein, partial (53%)
Length = 612
Score = 242 bits (618), Expect = 5e-65
Identities = 119/174 (68%), Positives = 139/174 (79%)
Frame = +1
Query: 2 ASTPSIPSHTKAWVYSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRALG 61
+S +IP+H KAW YS++G ++LKFD N+P P KEDQVLIKV AA+LNP+D KR G
Sbjct: 61 SSMAAIPTHIKAWAYSEHGKSVDVLKFDPNLPLPELKEDQVLIKVAAASLNPIDYKRMEG 240
Query: 62 HFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNPKTIGTLSEYTV 121
FK DSPLPT PGYDVAGVVV VG +VKKFKVGDEVYGDINE + PK +G+L+EYT
Sbjct: 241 AFKASDSPLPTAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINEQAMVYPKVVGSLAEYTA 420
Query: 122 AEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERVEFSSGKSLLVLGGAGGVGS 175
AEEK+L+HKP NLSF EAASLPL I TAY GLE FS+GKS+LVLGGAGGVG+
Sbjct: 421 AEEKLLSHKPQNLSFAEAASLPLTIETAYNGLELAGFSAGKSILVLGGAGGVGT 582
>BP038982
Length = 543
Score = 218 bits (555), Expect = 1e-57
Identities = 107/140 (76%), Positives = 121/140 (86%)
Frame = -1
Query: 181 AKHVFEASRIAATASTTKLDFLRKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERAVK 240
AKHV+ AS+IAAT+ST KL+ LRKLGAD IDYTKEN+E+L EKFDVVYD VG +E A K
Sbjct: 543 AKHVYGASKIAATSSTGKLELLRKLGADTPIDYTKENFEDLPEKFDVVYDTVGQTESAFK 364
Query: 241 AANEGGKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFYQTLE 300
EGGKVVTI+PPG PPAI F+LTSDGAVLEKL+P+LE+GKVKPILDPKSPFPF QT+E
Sbjct: 363 VLKEGGKVVTIVPPGLPPAIFFVLTSDGAVLEKLRPFLESGKVKPILDPKSPFPFSQTVE 184
Query: 301 AFSYLNTNRAIGKIVIHPIP 320
AFSYL T RA GK+VIHPIP
Sbjct: 183 AFSYLETGRATGKVVIHPIP 124
>TC8579 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial (40%)
Length = 619
Score = 212 bits (539), Expect = 8e-56
Identities = 104/154 (67%), Positives = 121/154 (78%)
Frame = +3
Query: 167 LGGAGGVGSLVIQLAKHVFEASRIAATASTTKLDFLRKLGADLAIDYTKENYEELTEKFD 226
L G+GGVGSL IQLAK VF A+R+AAT+ST L+ L+ LG DLAIDYTKEN+E+L EKFD
Sbjct: 3 LNGSGGVGSLAIQLAKQVFGAARVAATSSTRNLELLKSLGVDLAIDYTKENFEDLPEKFD 182
Query: 227 VVYDAVGDSERAVKAANEGGKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLENGKVKPI 286
VVYDA+G +RAVKA EGG VV + TPP F++TS+G VL KL PYLE+GKVKPI
Sbjct: 183 VVYDAIGQCDRAVKAIQEGGSVVALTGAVTPPGFRFVVTSNGTVLRKLNPYLESGKVKPI 362
Query: 287 LDPKSPFPFYQTLEAFSYLNTNRAIGKIVIHPIP 320
+D K PFPF Q EAFSYL TNRA GK+VIHPIP
Sbjct: 363 VDSKGPFPFTQLAEAFSYLETNRATGKVVIHPIP 464
>BP038466
Length = 442
Score = 117 bits (292), Expect = 3e-27
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = -2
Query: 258 PAIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFYQTLEAFSYLNTNRAIGKIVIH 317
PAIPFLLTSDGAVLEKLQPYLE+GKVKPILDPKSPFPF QT+EAFSYLNT+RA G++VI+
Sbjct: 441 PAIPFLLTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSYLNTSRATGEVVIY 262
Query: 318 PIP 320
PIP
Sbjct: 261 PIP 253
>AV771699
Length = 452
Score = 115 bits (288), Expect = 1e-26
Identities = 76/149 (51%), Positives = 88/149 (59%), Gaps = 10/149 (6%)
Frame = +1
Query: 1 MASTPSIPSHTKAWVYSQYGNIEEILKFDSNVPTPHPKE----------DQVLIKVVAAA 50
MASTP+IPSHT+AWVYS+YGNIE ILKFD NVPTP KE +++ + A
Sbjct: 25 MASTPNIPSHTRAWVYSEYGNIEHILKFDPNVPTPDIKEKPGAHQGCGCSPLILWITREA 204
Query: 51 LNPVDIKRALGHFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNP 110
V G F+ S L GYDVAGVVV VG QVKK I +P
Sbjct: 205 SGVVQ-----GSFEFSFSALG--QGYDVAGVVVRVGSQVKKV*GLGMRSMVI*MRRASDP 363
Query: 111 KTIGTLSEYTVAEEKVLAHKPSNLSFVEA 139
K+ G L EYT AEEKVLAHKPSNL+ +EA
Sbjct: 364 KSSGYLVEYTAAEEKVLAHKPSNLNVMEA 450
>TC9889 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1
(Fragment), partial (49%)
Length = 528
Score = 100 bits (249), Expect = 3e-22
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Frame = +1
Query: 16 YSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRALGHFKDIDSP--LPTV 73
Y YG LK VP P PK+++VL+++ AA++NPVD K G + + P P +
Sbjct: 40 YDAYGGGAAGLKH-VEVPVPSPKKNEVLLRLEAASINPVDWKIQKGVLRPLFLPRSFPHI 216
Query: 74 PGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNPKTIGTLSEYTVAEEKVLAHKPSN 133
P DVAG V VG QVK FKVGD+V + + + G L+E+ VA E + A +PS
Sbjct: 217 PCTDVAGEVAEVGPQVKDFKVGDKVIAKL------STQYGGGLAEFAVASETLTAARPSQ 378
Query: 134 LSFVEAASLPLAIITAYQGLERV------EFSSGKSLLVLGGAGGVGS 175
+S EAA LP+A +TA L ++ E K++LV +GGVGS
Sbjct: 379 VSPAEAAGLPIAGLTARDALTQIAGVKLHETGQPKNILVTAASGGVGS 522
>AV767419
Length = 323
Score = 100 bits (248), Expect = 4e-22
Identities = 47/59 (79%), Positives = 54/59 (90%)
Frame = -3
Query: 262 FLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFYQTLEAFSYLNTNRAIGKIVIHPIP 320
F+LTS+GAVL KL P+LE+GKVKPILDPKSPFPF QT+EAFSYL T+RA GK+VIHPIP
Sbjct: 312 FVLTSNGAVL*KLNPFLESGKVKPILDPKSPFPFSQTVEAFSYLETDRATGKVVIHPIP 136
>CB828208
Length = 441
Score = 88.2 bits (217), Expect(2) = 7e-21
Identities = 43/51 (84%), Positives = 46/51 (89%)
Frame = +1
Query: 246 GKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFY 296
GKVVTILPPGTPPA PF+LTSDGAVLEK QPYLE+GKVKPILDPKSP +
Sbjct: 1 GKVVTILPPGTPPA-PFILTSDGAVLEKPQPYLESGKVKPILDPKSPLSIF 150
Score = 28.5 bits (62), Expect(2) = 7e-21
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 290 KSPFPFYQTLEAFSYLNT 307
++PFPF Q +EAF++LN+
Sbjct: 131 RAPFPFSQAVEAFAHLNS 184
>AW719877
Length = 520
Score = 90.5 bits (223), Expect = 3e-19
Identities = 52/149 (34%), Positives = 89/149 (58%), Gaps = 6/149 (4%)
Frame = +2
Query: 73 VPGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNPKTIGTLSEYTVAEEKVLAHKPS 132
V G+D AG VV+ G+ FK GD+V+ P+ GT +E+ + +E+++ KPS
Sbjct: 41 VLGWDAAGRVVATGQDASLFKPGDDVFYS----GALAPQ--GTNAEFHLVDERLVGRKPS 202
Query: 133 NLSFVEAASLPLAIITAYQGL------ERVEFSSGKSLLVLGGAGGVGSLVIQLAKHVFE 186
+L + +AA+LPL ITA++ L ++ + ++L++GGAGGVGS+ +QLA+ + +
Sbjct: 203 SLDYAQAAALPLTAITAFEALFDRLDVKKPVVGAANAILIIGGAGGVGSIAVQLARQLTD 382
Query: 187 ASRIAATASTTKLDFLRKLGADLAIDYTK 215
+ IA + D++ LGA ID++K
Sbjct: 383 LTVIATASRPETRDWVLGLGAHHVIDHSK 469
>AV773204
Length = 455
Score = 66.6 bits (161), Expect(2) = 7e-15
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = -1
Query: 249 VTILPPGTPP-AIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFY 296
VTI+PPG PP AI ++L SDGAVLEKL+PYLE+GKVKP DP+ P +
Sbjct: 455 VTIVPPGLPPPAIYYILKSDGAVLEKLKPYLESGKVKPYPDPRRPLSLF 309
Score = 36.2 bits (82), Expect = 0.008
Identities = 17/24 (70%), Positives = 18/24 (74%)
Frame = -2
Query: 287 LDPKSPFPFYQTLEAFSYLNTNRA 310
L P PFPF TLEAFSYL +NRA
Sbjct: 337 LIPDVPFPFSLTLEAFSYLESNRA 266
Score = 29.6 bits (65), Expect(2) = 7e-15
Identities = 13/28 (46%), Positives = 16/28 (56%)
Frame = -3
Query: 291 SPFPFYQTLEAFSYLNTNRAIGKIVIHP 318
SPFPF L+ F +GK+VIHP
Sbjct: 324 SPFPFP*LLKHFPIWKVTEPLGKVVIHP 241
>TC17336 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial (14%)
Length = 410
Score = 75.9 bits (185), Expect = 9e-15
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 7 IPSHTKAWVYSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRALG 61
+PS KAWVY +YG ++ +LKFDSNV P KEDQVL++VVAAALNPVD KR G
Sbjct: 244 VPSEMKAWVYGEYGGVD-VLKFDSNVAVPDLKEDQVLVRVVAAALNPVDAKRRQG 405
>BI420064
Length = 410
Score = 73.6 bits (179), Expect = 4e-14
Identities = 40/89 (44%), Positives = 54/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 16 YSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRALGHFKDI-DSPLPTVP 74
Y+ YG LK VP P P +D+VLIK+ AA++NP D K +G + + P +P
Sbjct: 126 YNSYGGGPSALK-QVEVPIPAPSKDEVLIKLEAASINPFDWKVQIGKLRPLLPRKFPYIP 302
Query: 75 GYDVAGVVVSVGEQVKKFKVGDEVYGDIN 103
G D+AG VV +G+ VKKFK GD+V G N
Sbjct: 303 GTDIAGEVVEIGQGVKKFKPGDKVVGMAN 389
>TC19020
Length = 438
Score = 71.2 bits (173), Expect = 2e-13
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +1
Query: 253 PPGTPPAIPFLLTSDGAVLEKLQPYLENGKVKPILDPKSPFPFYQTLEAFSYLNTNRAIG 312
PP P A+ LT G LEKL+PYLE G++K ++DP P+ F +EAF YL T RA G
Sbjct: 10 PPSHPRAVYSSLTVSGESLEKLEPYLERGELKAVIDPTGPYHFDNVIEAFRYLETGRAWG 189
Query: 313 KIVIHPIP 320
K+VI P
Sbjct: 190 KVVISCFP 213
>CB828515
Length = 496
Score = 68.6 bits (166), Expect = 1e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 246 GKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLENGKV 283
GKVVTILPPGTPPA PF+LTSDGAVLEK QPYLE+GKV
Sbjct: 2 GKVVTILPPGTPPA-PFILTSDGAVLEKPQPYLESGKV 112
>TC8042 homologue to UP|P93619 (P93619) Probable NADP-dependent
oxidoreductase TED2 , complete
Length = 1244
Score = 67.8 bits (164), Expect = 2e-12
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 7/240 (2%)
Frame = +2
Query: 1 MASTPSIPSHTKAWVYSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKRAL 60
++S+ S KA + G +ILK++ +V PKE++V +K A +N +D+
Sbjct: 89 LSSSSSATEMVKAIRVHELGG-PQILKWE-DVEIGDPKENEVRVKNKAIGVNFIDVYFRK 262
Query: 61 GHFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINEITLHNPKTIGTLSEYT 120
G +K SP PG + GVV +VG +VGD V + + IG+ E
Sbjct: 263 GVYKASTSPF--TPGMEAVGVVTAVGGGPTGVQVGDLVG--------YAGQPIGSYVEEQ 412
Query: 121 VAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERV-EFSSGKSLLVLGGAGGVGSLVIQ 179
+ + PS++ AAS+ L +TA L R + G ++LV AGGVGSL+ Q
Sbjct: 413 ILHAGKVVPIPSSIDPSVAASVMLKGMTAQFLLRRCFKVERGHTILVHAAAGGVGSLLCQ 592
Query: 180 LAKHVFEASRIAATASTTKLDFLRKLGADLAIDYTKENY----EELT--EKFDVVYDAVG 233
A + A+ I ++ K ++ G I Y +E++ E+T +VVYD+VG
Sbjct: 593 WA-NALGATVIGTVSNEEKAAQAKEDGCHHVIIYKEEDFVARVNEITSGNGVEVVYDSVG 769
>TC8891 similar to GB|AAP68279.1|31711846|BT008840 At1g72680 {Arabidopsis
thaliana;} , complete
Length = 1636
Score = 62.0 bits (149), Expect = 1e-10
Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 42/271 (15%)
Frame = +1
Query: 2 ASTPSIPSHTKAWVYSQYGNIEEILKF----DSNVPTPHP------KEDQVLIKVVAAAL 51
+S+ S+ H K + S G EE L + S V +P+ +D V +K+ +
Sbjct: 58 SSSSSLHLHRK--IMSSEGASEECLGWAATDTSGVLSPYKFSRRAVGDDDVYVKISHCGV 231
Query: 52 NPVDI---KRALGHFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEV---------- 98
D+ + LG+ S P VPG+++AG+V VG V F VGD V
Sbjct: 232 CYADVAWTRNTLGN-----SVYPCVPGHEIAGIVTKVGSNVHGFSVGDHVGVGTYVNSCR 396
Query: 99 --------------YGDI---NEITLHNPKTIGTLSEYTVAEEKVLAHKPSNLSFVEAAS 141
G + N + T G S++ V E+ P + AA
Sbjct: 397 DCEFCDDGLEHHCVKGSVFTFNGVDHDGTITKGGYSKFIVVHERYCFLIPKSYPLASAAP 576
Query: 142 LPLAIITAYQGLERVEFSS-GKSLLVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLD 200
L A IT Y + R + + GKSL V+G GG+G + ++ K + +T+ + K +
Sbjct: 577 LLCAGITVYSPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVFSTSISKKEE 753
Query: 201 FLRKLGAD-LAIDYTKENYEELTEKFDVVYD 230
L LGAD + +E L + D + D
Sbjct: 754 ALSLLGADRFVVSSDQEEMRALAKSLDFIVD 846
>BP038362
Length = 274
Score = 59.7 bits (143), Expect = 6e-10
Identities = 26/34 (76%), Positives = 32/34 (93%)
Frame = -3
Query: 272 EKLQPYLENGKVKPILDPKSPFPFYQTLEAFSYL 305
EKL+P+LE+G+VKPILDP+SPFPF T+EAFSYL
Sbjct: 272 EKLRPFLESGQVKPILDPQSPFPFSPTVEAFSYL 171
Score = 39.7 bits (91), Expect = 7e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -1
Query: 285 PILDPKSPFPFYQTLEAFSYLNTNRAIGKIVIHPIP 320
P L P++PFPF Q + F +T RA GK+VI P+P
Sbjct: 232 PYLIPRAPFPFRQLWKPFHIWDTARAPGKVVIPPLP 125
>AV415744
Length = 415
Score = 57.0 bits (136), Expect = 4e-09
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Frame = +1
Query: 153 LERVEFSSGKSLLVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLDFLRKLGADLAID 212
+ R + +SG+ LLVLG AGGVG +Q+ K A IA K+ L+ G D +D
Sbjct: 28 VHRAQLTSGQVLLVLGAAGGVGLAAVQIGK-ACGAIVIAVARGAEKVQLLKSHGVDHVVD 204
Query: 213 YTKENYEELTEKF---------DVVYDAVGD--SERAVKAANEGGKVVTI-LPPGTPPAI 260
T EN E ++F DV+YD VG ++ ++ G ++ I G P I
Sbjct: 205 LTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRLLKWGANILIIGFASGEIPVI 384
Query: 261 P 261
P
Sbjct: 385 P 387
>TC17332 similar to UP|MTD_FRAAN (Q9ZRF1) Probable mannitol dehydrogenase
(NAD-dependent mannitol dehydrogenase) , partial (63%)
Length = 736
Score = 54.7 bits (130), Expect = 2e-08
Identities = 59/236 (25%), Positives = 89/236 (37%), Gaps = 28/236 (11%)
Frame = +1
Query: 1 MASTPSIPSHTKA--WVYSQYGNIEEILKFDSNVPTPHPKEDQVLIKVVAAALNPVDIKR 58
MAS P + KA W + KF E V KV+ + D+
Sbjct: 40 MASQPEMEHPKKAFGWAARDSSGVLSPFKFSRR----ETGEKDVTFKVLYCGICHSDLHM 207
Query: 59 ALGHFKDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEV------------YGDINEIT 106
+ S P VPG+++AGVV VG +V+KFKVGD V + +
Sbjct: 208 IKNEWGS--SVYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMVNSCRSCQSCADNLE 381
Query: 107 LHNPK--------------TIGTLSEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQG 152
+ PK T G S+ V++E NL AA A IT Y
Sbjct: 382 NYCPKMILTYAAKNVDGTITYGGYSDLMVSDEDFGIRISDNLPLEAAAPFLCAGITVYSP 561
Query: 153 LERVEFSSGKSLLVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLDFLRKLGAD 208
L+ + + G GG+G + ++ A + +T+ K + + K+ AD
Sbjct: 562 LKYYGLDKPGLHVGVSGLGGLGHMAVKFAIALGAKVTAISTSPNKKTEAIEKV*AD 729
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,765,772
Number of Sequences: 28460
Number of extensions: 60000
Number of successful extensions: 305
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of query: 320
length of database: 4,897,600
effective HSP length: 90
effective length of query: 230
effective length of database: 2,336,200
effective search space: 537326000
effective search space used: 537326000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC139600.7