BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139354.10 - phase: 0
(381 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CN825151 214 2e-56
AV765573 181 2e-46
BG662148 154 2e-38
TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fra... 138 1e-33
TC10971 similar to UP|Q40318 (Q40318) Coil protein, partial (42%) 129 6e-31
AV773399 127 2e-30
AW720418 123 6e-29
TC13503 similar to UP|Q8W0Y7 (Q8W0Y7) Enod8.3 (Fragment), partia... 119 6e-28
AV425516 117 4e-27
TC10972 similar to UP|Q40318 (Q40318) Coil protein, partial (32%) 108 1e-24
TC12415 similar to UP|Q9LII9 (Q9LII9) Genomic DNA, chromosome 3,... 108 2e-24
BP059660 107 3e-24
TC11166 weakly similar to UP|Q9FXJ3 (Q9FXJ3) F1K23.17, partial (... 86 1e-17
CB827193 84 5e-17
TC14231 75 1e-14
TC17805 weakly similar to UP|O82681 (O82681) Lanatoside 15'-O-ac... 74 3e-14
BG662032 74 5e-14
TC15680 weakly similar to UP|Q7Y1X1 (Q7Y1X1) ENSP-like protein, ... 73 7e-14
TC12732 similar to UP|Q9FJ41 (Q9FJ41) GDSL-motif lipase/hydrolas... 73 9e-14
BI419094 73 9e-14
>CN825151
Length = 740
Score = 214 bits (545), Expect = 2e-56
Identities = 106/206 (51%), Positives = 140/206 (67%), Gaps = 2/206 (0%)
Frame = +1
Query: 32 CDFPAIFSFGASNVDTGGLAAAFRAPPSPYGETYFHRSTGRFSDGRIILDFIARSFRLPY 91
C FPAI++FG SN DTGG++AAF P PYGE++ + + R DGR+I+DFIA LPY
Sbjct: 91 CAFPAIYNFGDSNSDTGGISAAFEPIPPPYGESFPQKPSARDCDGRLIVDFIAEKLNLPY 270
Query: 92 LSPYLNSLGSNFTHGANFASGGSTINIPKSILPNGKLSPFSLQIQYIQFKEFISKTKLIR 151
LS YLNSLG+N+ HGANFA+GGSTI + +SPFSL +Q++QFK+F ++TK +
Sbjct: 271 LSAYLNSLGTNYRHGANFATGGSTIRRQNETIFQYGISPFSLDMQFVQFKQFKARTKQLY 450
Query: 152 DQG--GVFATLIPKEDYFSKALYIFDIGQNDLTIGFFGNKTIQQVNATVPDIVNNYIENI 209
+ + + +P + FSKALY FDIGQNDL++G F Q+ ++PDIVN +
Sbjct: 451 QEAKTALERSKLPVPEEFSKALYTFDIGQNDLSVG-FRMMNFDQMRESMPDIVNQLASAV 627
Query: 210 KNIYNLGARSFWIHGTGPKGCAPVIL 235
KNIY LG R+FWIH T P GC PV L
Sbjct: 628 KNIYELGGRTFWIHNTAPIGCLPVNL 705
>AV765573
Length = 440
Score = 181 bits (458), Expect = 2e-46
Identities = 87/142 (61%), Positives = 109/142 (76%), Gaps = 3/142 (2%)
Frame = +2
Query: 6 LSRHIPLVTLIVLVLCITPPIF---ATKNCDFPAIFSFGASNVDTGGLAAAFRAPPSPYG 62
LSRHI L L+ + + P + TK CDFPAIF+FGASN DTGG AAAF P P G
Sbjct: 14 LSRHISLFALLFTTVLLNPDVVFATTTKTCDFPAIFNFGASNSDTGGFAAAFLQPGPPQG 193
Query: 63 ETYFHRSTGRFSDGRIILDFIARSFRLPYLSPYLNSLGSNFTHGANFASGGSTINIPKSI 122
+TYF R GRFSDGRIILDFIA++F LPYLS YLNSLG+N++HGA+FA+ STI +P+S+
Sbjct: 194 DTYFGRPAGRFSDGRIILDFIAQNFELPYLSAYLNSLGANYSHGASFATLSSTIRLPESV 373
Query: 123 LPNGKLSPFSLQIQYIQFKEFI 144
+PNG+ SPF L +QY+QF++FI
Sbjct: 374 VPNGRSSPFFLGLQYLQFQQFI 439
>BG662148
Length = 415
Score = 154 bits (390), Expect = 2e-38
Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 5/133 (3%)
Frame = +2
Query: 10 IPLVTLIVLVLCITP-----PIFATKNCDFPAIFSFGASNVDTGGLAAAFRAPPSPYGET 64
I ++L V V T P++ CDFPAIF+FGASN DTGG AAAF P P+G+T
Sbjct: 26 ITQISLFVFVFTATSTTLLNPVYGG-GCDFPAIFNFGASNSDTGGYAAAFEGPKPPHGDT 202
Query: 65 YFHRSTGRFSDGRIILDFIARSFRLPYLSPYLNSLGSNFTHGANFASGGSTINIPKSILP 124
YFHR GR+SDGRII+DFIA+SF L YLS YL+SLGSNF+HGANFA+ GSTI +PK++ P
Sbjct: 203 YFHRPAGRYSDGRIIIDFIAQSFGLTYLSAYLDSLGSNFSHGANFATLGSTIILPKNVKP 382
Query: 125 NGKLSPFSLQIQY 137
G SPF L +QY
Sbjct: 383 RG--SPFFLGVQY 415
>TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fragment),
partial (48%)
Length = 679
Score = 138 bits (348), Expect = 1e-33
Identities = 72/179 (40%), Positives = 99/179 (55%), Gaps = 4/179 (2%)
Frame = +3
Query: 206 IEN-IKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNFKLK 264
IEN +K++YN GAR FW+H TGP GC P ILA D +GC YN ++ FN L
Sbjct: 9 IENAVKSLYNEGARKFWVHNTGPLGCLPKILALAQKKDLDLFGCLSSYNSAARLFNEALY 188
Query: 265 EALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGG---EYNIGVGCG 321
+ +LR+ L A + YVDIY K+ L N KYGF P CCG+GG +++ V CG
Sbjct: 189 HSSQKLRTRLKDATLVYVDIYAIKHDLIANATKYGFSNPLTVCCGFGGPPYNFDLRVTCG 368
Query: 322 ASININGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTGVFNDPPISLDRACYR 380
G ++ C S + WDG H+TEAAN + S+IL+ ++ P + C+R
Sbjct: 369 QP----GYQV----CDEGSRYVNWDGTHHTEAANTFIASKILSTDYSTPRTPFEFFCHR 521
>TC10971 similar to UP|Q40318 (Q40318) Coil protein, partial (42%)
Length = 615
Score = 129 bits (325), Expect = 6e-31
Identities = 69/164 (42%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Frame = +2
Query: 75 DGRIILDFIARSFRLPYLSPYLNSLGSNFTHGANFASGGSTINIPKSILPNGKLSPFSLQ 134
+GR+I+DFI +PYLS YLNS+GSN+ HGANFA+GG+ SI P SPF L
Sbjct: 122 NGRLIIDFITEELEIPYLSAYLNSIGSNYRHGANFAAGGA------SIRPVYGFSPFYLG 283
Query: 135 IQYIQFKEFISKTKLIRDQGG------VFATLIPKEDYFSKALYIFDIGQNDLTIGFFGN 188
+Q QF + S + + +Q F + +P+ + FSKALY DIGQNDL G +
Sbjct: 284 MQVAQFIQLQSHIENLLNQFSSNRTEPPFKSYLPRPEDFSKALYTIDIGQNDLGFGLM-H 460
Query: 189 KTIQQVNATVPDIVNNYIENIKNIYNLGARSFWIHGTGPKGCAP 232
+ ++V ++P+++ N+ +++ +Y++GAR FWIH T P GC P
Sbjct: 461 TSEEEVLRSIPEMMRNFTYDVQVLYDVGARVFWIHNTCPIGCLP 592
>AV773399
Length = 492
Score = 127 bits (320), Expect = 2e-30
Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
Frame = -1
Query: 270 LRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYN--IGVGCGASININ 327
LR L SA+ITYVD+Y+ KYSL + + + F P ACCG+GG+YN I +GCGA + ++
Sbjct: 492 LRKKLHSASITYVDVYSVKYSLISQAKTHAFGEPLRACCGHGGKYNYYIHIGCGAKLKVH 313
Query: 328 GTKIVAGS-CKNPSTRIIWDGVHYTEAANEIVFSQILTGVFNDPPISLDRACYR 380
G +I+ G C++PS + WDGVH+TEAAN+ VF QI+ G F+DPPI L+ AC++
Sbjct: 312 GQEILLGKPCEDPSLSVNWDGVHFTEAANKWVFDQIVDGSFSDPPIPLNMACHK 151
>AW720418
Length = 500
Score = 123 bits (308), Expect = 6e-29
Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 3/151 (1%)
Frame = +3
Query: 156 VFATLIPKEDYFSKALYIFDIGQNDLTIGFFGNKTIQQVNATVPDIVNNYIENIKNIYNL 215
+F + IP+ + FS+ALY+FDIGQNDL+ GF + +Q+ A++P+I++ + + ++ +Y
Sbjct: 45 IFXSSIPRXEDFSRALYMFDIGQNDLSYGFQYSSE-EQLRASLPNILSQFSQAVEQLYXE 221
Query: 216 GARSFWIHGTGPKGCAPVILANFPSAIK---DSYGCAKQYNEVSQYFNFKLKEALAELRS 272
GAR FWIH TGP GC P+ + + K D+ GC N ++ FN +LK + +LR
Sbjct: 222 GARVFWIHNTGPIGCLPLNFLAYGKSKKGNVDANGCVISQNGIAHEFNLQLKNQVLQLRK 401
Query: 273 NLSSAAITYVDIYTPKYSLFTNPEKYGFELP 303
L A + YVD+Y KY L +N K GF P
Sbjct: 402 KLPLAKLIYVDVYKAKYELVSNARKLGFVNP 494
>TC13503 similar to UP|Q8W0Y7 (Q8W0Y7) Enod8.3 (Fragment), partial (30%)
Length = 705
Score = 119 bits (299), Expect = 6e-28
Identities = 67/130 (51%), Positives = 74/130 (56%), Gaps = 29/130 (22%)
Frame = -2
Query: 209 IKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNFKLKEALA 268
IK IY+L ARSF IH T P GC P IL NFP A +D YGCA YNEV++YFN KLKEALA
Sbjct: 392 IKLIYDLRARSFGIHNT*PIGCLPAILTNFPKAERDHYGCAT*YNEVAKYFNQKLKEALA 213
Query: 269 ELRSNLSSAAITYVDIYTPKYSLFTNPEKY-----------------------------G 299
+LR L AAI YVDIY+PK F N EKY G
Sbjct: 212 QLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETNQNYSNSYSQTYLK*MLQIESFINIVG 33
Query: 300 FELPFVACCG 309
FELP + CCG
Sbjct: 32 FELPLINCCG 3
>AV425516
Length = 415
Score = 117 bits (292), Expect = 4e-27
Identities = 50/85 (58%), Positives = 65/85 (75%), Gaps = 2/85 (2%)
Frame = -3
Query: 296 EKYGFELPFVACCGYGGEYNI--GVGCGASININGTKIVAGSCKNPSTRIIWDGVHYTEA 353
E GFE+P + CCGYGG+YN GV CG +I ++G +I GSC++PST++IWDG HYTEA
Sbjct: 398 EYQGFEIPLINCCGYGGKYNYTDGVACGQNIKVDGEEIFVGSCESPSTKVIWDGTHYTEA 219
Query: 354 ANEIVFSQILTGVFNDPPISLDRAC 378
AN+IVF I TG F+DPPI L+ +C
Sbjct: 218 ANKIVFDLISTGAFSDPPIPLNMSC 144
>TC10972 similar to UP|Q40318 (Q40318) Coil protein, partial (32%)
Length = 548
Score = 108 bits (271), Expect = 1e-24
Identities = 55/113 (48%), Positives = 74/113 (64%)
Frame = +1
Query: 28 ATKNCDFPAIFSFGASNVDTGGLAAAFRAPPSPYGETYFHRSTGRFSDGRIILDFIARSF 87
++ C +PA+++FG SN +TG + AAF SP G ++F +GR SDGR+I+DFI
Sbjct: 196 SSSKCSYPAVYNFGDSNSNTGVVYAAFAGLQSPGGISFFGNLSGRASDGRLIIDFITEEL 375
Query: 88 RLPYLSPYLNSLGSNFTHGANFASGGSTINIPKSILPNGKLSPFSLQIQYIQF 140
+PYLS YLNS+GSN+ HGANFA+GG+ SI P SPF L +Q QF
Sbjct: 376 EIPYLSAYLNSIGSNYRHGANFAAGGA------SIRPVYGFSPFYLGMQVAQF 516
>TC12415 similar to UP|Q9LII9 (Q9LII9) Genomic DNA, chromosome 3, TAC
clone:K24A2, partial (22%)
Length = 366
Score = 108 bits (269), Expect = 2e-24
Identities = 53/118 (44%), Positives = 74/118 (61%)
Frame = +3
Query: 19 VLCITPPIFATKNCDFPAIFSFGASNVDTGGLAAAFRAPPSPYGETYFHRSTGRFSDGRI 78
++ + + T+ +PAIF+FG SN DTG ++AAF P G+ + +GR+SDGR+
Sbjct: 33 IVIVAAGVSFTEGSQYPAIFNFGDSNSDTGAISAAFTIVHPPNGQNFLGALSGRYSDGRL 212
Query: 79 ILDFIARSFRLPYLSPYLNSLGSNFTHGANFASGGSTINIPKSILPNGKLSPFSLQIQ 136
I+DFI +LPYL YLNS+G+N+ HGANFA+GGS+I G SPF L Q
Sbjct: 213 IIDFITEELKLPYLDAYLNSVGANYRHGANFATGGSSI-------LKGGYSPFHLAYQ 365
>BP059660
Length = 501
Score = 107 bits (268), Expect = 3e-24
Identities = 52/110 (47%), Positives = 64/110 (57%)
Frame = -3
Query: 269 ELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGASINING 328
+LR NL A TYVD+YT KY L +N K GF P CCG Y + CG +NG
Sbjct: 496 QLRRNLPKAKFTYVDVYTAKYELISNASKQGFVNPLEVCCG--SYYGYRIDCGKKAVVNG 323
Query: 329 TKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTGVFNDPPISLDRAC 378
T + CKNPS I WDGVHYT+AAN+ V I G +DPP+ + +AC
Sbjct: 322 T-VYGNPCKNPSQHISWDGVHYTQAANKWVAKHIRDGSLSDPPVPIGQAC 176
>TC11166 weakly similar to UP|Q9FXJ3 (Q9FXJ3) F1K23.17, partial (15%)
Length = 495
Score = 85.5 bits (210), Expect = 1e-17
Identities = 48/132 (36%), Positives = 66/132 (49%), Gaps = 2/132 (1%)
Frame = +2
Query: 244 DSYGCAKQYNEVSQYFNFKLKEALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELP 303
D GC K NE ++++N KL+ + LR A I Y D Y L+ NP+K+GF
Sbjct: 2 DQAGCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGFR-G 178
Query: 304 FVACCGYGG--EYNIGVGCGASININGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQ 361
CCG GG YN GCG+ I +C +PS I WDG+H TEAA +
Sbjct: 179 LEICCGMGGPYNYNASAGCGSPGVI--------ACDDPSEYIGWDGIHLTEAAYGFISDG 334
Query: 362 ILTGVFNDPPIS 373
++ G ++ P S
Sbjct: 335 LMNGPYSFPQFS 370
>CB827193
Length = 528
Score = 83.6 bits (205), Expect = 5e-17
Identities = 54/127 (42%), Positives = 65/127 (50%), Gaps = 13/127 (10%)
Frame = +1
Query: 32 CDFPAIFSFGASNVDTGGLAAAFRAPPS-----PYGETYFHRSTGRFSDGRIILDFIARS 86
C F +IFSFG S DTG L + P PYG TYFHR + R SDGRII+D+IA S
Sbjct: 67 CSFSSIFSFGDSLADTGNLYLSSALPSHHCFFPPYGRTYFHRPSARCSDGRIIIDYIAES 246
Query: 87 FRLPYLSPYLNSL------GSNFTHGANFASGGSTINIPKSILPNGKLSP--FSLQIQYI 138
LP++ PYL N GANFA G+T G P +SL +Q
Sbjct: 247 LGLPFVKPYLEIKKHGGLENFNVEGGANFAVIGATALEETFFQDKGIQLPVNYSLPVQLN 426
Query: 139 QFKEFIS 145
FKE +S
Sbjct: 427 WFKELLS 447
>TC14231
Length = 803
Score = 75.5 bits (184), Expect = 1e-14
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +2
Query: 207 ENIKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIKDSYG-CAKQYNEVSQYFNFKLKE 265
E ++ +Y+LGAR + GTGP GC P LA ++ G C + + +N +L
Sbjct: 8 EVLRKMYDLGARRVLVTGTGPMGCVPPXLA-----MRSRTGDCDVELXRAASLYNPQLVN 172
Query: 266 ALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGASIN 325
+ L L + + Y +NP YGF +ACCG G IG+ C + N
Sbjct: 173 MIKGLNQELGADVFIAANAYQMHMDFISNPRAYGFVTSKIACCGQGPYNGIGL-CTPASN 349
Query: 326 INGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTG 365
+ C N WD H +E A+ I+ QIL G
Sbjct: 350 L---------CPNRDIYAFWDPFHPSERASRIIVQQILRG 442
>TC17805 weakly similar to UP|O82681 (O82681) Lanatoside
15'-O-acetylesterase precursor, partial (12%)
Length = 484
Score = 74.3 bits (181), Expect = 3e-14
Identities = 37/93 (39%), Positives = 50/93 (52%)
Frame = +3
Query: 288 KYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGASININGTKIVAGSCKNPSTRIIWDG 347
KY L ++ + GF P C GY + + G NG + +C+ PS + WDG
Sbjct: 9 KYGLISHTQHEGFVDPLPICFGYHVN-DTHIWFGTIGTANGKDVFGNACEKPSMYVSWDG 185
Query: 348 VHYTEAANEIVFSQILTGVFNDPPISLDRACYR 380
VHY EAAN V ++IL G F DPP + +ACYR
Sbjct: 186 VHYAEAANHWVANRILNGSFTDPPTLITQACYR 284
>BG662032
Length = 421
Score = 73.6 bits (179), Expect = 5e-14
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +1
Query: 203 NNYIENIKNIYNLGARSFWIHGTGPKGCAPVILANFPSAIK--DSYGCAKQYNEVSQYFN 260
+++ + +Y L AR F I GP GC P + I + C N+++ +N
Sbjct: 13 SHFRAQLTRLYRLDARKFVIGNVGPIGCIP-----YQKTINQLNENECVDLPNKLALQYN 177
Query: 261 FKLKEALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGC 320
+LK+ +AEL NL A ++Y L N +KYGF ACCG GG++ V C
Sbjct: 178 ARLKDLMAELNDNLPGATFVVANVYDLVMELIKNYDKYGFTTSTKACCGNGGQFAGIVPC 357
Query: 321 GASININGTKIVAGSCKNPSTRIIWDGVH 349
G + +I C + + WD H
Sbjct: 358 GPTSSI---------CTDRYKHVFWDPYH 417
>TC15680 weakly similar to UP|Q7Y1X1 (Q7Y1X1) ENSP-like protein, partial
(7%)
Length = 641
Score = 73.2 bits (178), Expect = 7e-14
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 307 CCG-YGGEYNIGVGCGASININGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTG 365
CCG Y G Y I CG + +GT + +CKNPS + WDGVHY+E AN ++ QIL+G
Sbjct: 7 CCGNYLGGYKIS--CGQNTTESGT-VSDKTCKNPSEFLSWDGVHYSEEANLLIAKQILSG 177
Query: 366 VFNDPPISLDRACY 379
F+DPP+++ +AC+
Sbjct: 178 AFSDPPVTIRQACF 219
>TC12732 similar to UP|Q9FJ41 (Q9FJ41) GDSL-motif lipase/hydrolase-like
protein, partial (5%)
Length = 490
Score = 72.8 bits (177), Expect = 9e-14
Identities = 41/106 (38%), Positives = 52/106 (48%)
Frame = +1
Query: 248 CAKQYNEVSQYFNFKLKEALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVAC 307
C Q N SQ +N KL+ L LR+ L A + Y DIYTP + +P KYGFE C
Sbjct: 43 CNDQQNTDSQVYNTKLQSHLESLRATLKGAKVGYFDIYTPFMDMIHSPAKYGFEQTLEGC 222
Query: 308 CGYGGEYNIGVGCGASININGTKIVAGSCKNPSTRIIWDGVHYTEA 353
CG G +G C A A +C + S + WD VH T+A
Sbjct: 223 CG-SGLVEMGPVCNA---------FAPTCPDASKYLFWDAVHPTQA 330
>BI419094
Length = 585
Score = 72.8 bits (177), Expect = 9e-14
Identities = 46/137 (33%), Positives = 62/137 (44%)
Frame = +3
Query: 227 PKGCAPVILANFPSAIKDSYGCAKQYNEVSQYFNFKLKEALAELRSNLSSAAITYVDIYT 286
P GC P + F DS C + N + FN KL L+ +L + +DIY
Sbjct: 15 PVGCLPAAITLFGH---DSNQCVARLNNDAVNFNRKLNTTSQSLQKSLPGLKLVLLDIYQ 185
Query: 287 PKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGASININGTKIVAGSCKNPSTRIIWD 346
P Y L T P + GF ACCG G SI N I G+C N S + WD
Sbjct: 186 PLYDLVTKPSENGFAEARRACCGTG-------LLETSILCNQKSI--GTCANASEYVFWD 338
Query: 347 GVHYTEAANEIVFSQIL 363
G H +EAAN+++ ++
Sbjct: 339 GFHPSEAANQVLAGDLI 389
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.141 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,991,787
Number of Sequences: 28460
Number of extensions: 100262
Number of successful extensions: 569
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of query: 381
length of database: 4,897,600
effective HSP length: 92
effective length of query: 289
effective length of database: 2,279,280
effective search space: 658711920
effective search space used: 658711920
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC139354.10