BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138133.14 + phase: 0
(576 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 148 2e-36
AV779547 119 1e-27
TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (... 118 2e-27
AV406755 118 2e-27
BP045440 111 3e-25
CB828263 110 5e-25
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 109 1e-24
AV409408 107 7e-24
BP065014 101 3e-22
BP064315 89 2e-18
AV410283 81 5e-16
TC12663 weakly similar to UP|Q84ZV8 (Q84ZV8) R 3 protein, partia... 59 9e-13
BP065724 69 2e-12
AV427118 68 4e-12
AI967395 66 2e-11
TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like pr... 64 9e-11
TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like... 63 1e-10
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 61 4e-10
AW428699 59 2e-09
TC12592 55 2e-08
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 148 bits (374), Expect = 2e-36
Identities = 81/157 (51%), Positives = 111/157 (70%), Gaps = 2/157 (1%)
Frame = +1
Query: 7 SSFTYQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKN-AIEKS 65
SSF Y VF+S +DTR GF+G+LY AL+DKGI TFIDD L R D+I ++ + AIE S
Sbjct: 91 SSFIYDVFISLITSDTRFGFSGDLYTALSDKGILTFIDDG-LPRPDDIMSTVNSKAIESS 267
Query: 66 RIFIPVFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAV 125
RI I V SENYASSSFCLDEL++I + KG L+ PVF V+P+DVR+ G +G+A A
Sbjct: 268 RIAIVVISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVRYQKGGFGKAFAS 447
Query: 126 HKKKFQNDKDNTERLQQWKEALSQAANLSGQH-YKHG 161
H+++F +D + ++++W+ AL Q A+L H +KHG
Sbjct: 448 HEERFGSD---SAKVRKWRNALKQVADLKAFHFFKHG 549
>AV779547
Length = 556
Score = 119 bits (298), Expect = 1e-27
Identities = 66/141 (46%), Positives = 91/141 (63%)
Frame = +1
Query: 15 LSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIPVFSE 74
+SFRG DTR+ FT +L AL KG TF DD L++G I+ L AIE S+I I VFS+
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 75 NYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDK 134
YASS++CL EL I K VLPV V P++VR +G YGEA H+++F K
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQSGNYGEAFLKHEERF---K 459
Query: 135 DNTERLQQWKEALSQAANLSG 155
++ E +Q+W++AL++ A+LSG
Sbjct: 460 EDLEMVQRWRKALAEVADLSG 522
>TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (28%)
Length = 918
Score = 118 bits (296), Expect = 2e-27
Identities = 87/265 (32%), Positives = 146/265 (54%), Gaps = 11/265 (4%)
Frame = +1
Query: 323 ESTHAVEGLNATEALELLRWMAFKENVP-SSHEDILNRALTYASGLPLAIVIIGSNLVGR 381
+ + V+ ++ ++L+L AFK N P ++ D+ + L+YA G+PLA+ ++G L GR
Sbjct: 4 DEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYGR 183
Query: 382 SVQDSMSTLDGYEEIPNKEIQRILKVSYDSLEKEEQSVFLDIACCFKGCKWPEVKEILHA 441
+ S L E++P+ EI +LK+SYD L+ +++ +FLDIAC + G V + L +
Sbjct: 184 ERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLDS 363
Query: 442 HYGHCIVHHVAVLAEKSLMDHLKYDSYVTLHDLIEDMGKEVVRQESPDEPGERSRLWFE- 500
G + VL ++ L+ L + + +HDLIE MGKE+VRQ+ P++PG+RSRLW +
Sbjct: 364 -CGFFADIGMEVLKDRCLISIL--EGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDD 534
Query: 501 -------RDIGTRKIKMINMKFPSMESDIDWNGNAFEKMTNLKTF-ITENGHHSKSLEYL 552
++ GT I+ I + + ++ + F+ MTNL+ ++ S +LE
Sbjct: 535 QTYDVLGKNKGTDAIQCIFL-YTCPIKIVNLHAETFKYMTNLRMLQFYKSRVCSLALECD 711
Query: 553 PSSLRVMKGCIP-KSPSSSSSNKAG 576
PS CI KSP S + + G
Sbjct: 712 PS-------CISWKSPESFTISSLG 765
>AV406755
Length = 425
Score = 118 bits (296), Expect = 2e-27
Identities = 62/116 (53%), Positives = 78/116 (66%)
Frame = +3
Query: 7 SSFTYQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSR 66
S ++Y VFLSFRG ++R FT +LY AL + GI F+D N+LQRG++I+ SL AIE SR
Sbjct: 72 SKWSYDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMD-NELQRGEDISSSLLKAIEDSR 248
Query: 67 IFIPVFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEA 122
I I +FS NY S +CLDEL I C T G V+PVF VDP+D+R G GEA
Sbjct: 249 IAIIIFSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRKQRGTVGEA 416
>BP045440
Length = 535
Score = 111 bits (278), Expect = 3e-25
Identities = 66/147 (44%), Positives = 85/147 (56%), Gaps = 2/147 (1%)
Frame = -3
Query: 11 YQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIP 70
YQ+F+SFRG DTR FT LY+ L +G TF DD L+ G I L + IE+SR I
Sbjct: 527 YQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPI-EKLLDDIEESRFAII 351
Query: 71 VFSENYASSSFCLDELVHITHCYDTKG--CLVLPVFIGVDPTDVRHHTGRYGEALAVHKK 128
+ S+NYA S +CL EL I C D +G LVLP V PT+VRH RY +A+A H+K
Sbjct: 350 ILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVRHVINRYADAMAKHEK 171
Query: 129 KFQNDKDNTERLQQWKEALSQAANLSG 155
+ K +Q WK+AL L+G
Sbjct: 170 NGIDSK----TIQAWKKALFDVCTLTG 102
>CB828263
Length = 570
Score = 110 bits (276), Expect = 5e-25
Identities = 55/109 (50%), Positives = 75/109 (68%)
Frame = +2
Query: 47 DLQRGDEITPSLKNAIEKSRIFIPVFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIG 106
DLQRGDEI+ SL AIE++++ + VFS+NY +S +CLDELV I C T+G +VLPVF
Sbjct: 5 DLQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFYD 184
Query: 107 VDPTDVRHHTGRYGEALAVHKKKFQNDKDNTERLQQWKEALSQAANLSG 155
+DP+ VR+ TG Y EA H +++Q+W+EAL +AANLSG
Sbjct: 185 IDPSHVRNQTGTYAEAFVKH--------GQVDKVQKWREALREAANLSG 307
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 109 bits (272), Expect = 1e-24
Identities = 60/130 (46%), Positives = 78/130 (59%)
Frame = +1
Query: 30 LYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIPVFSENYASSSFCLDELVHI 89
LY AL +G TF+DD L G+EI SL +A EKSR+ I VFSENY SS+CLDELV I
Sbjct: 1 LYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKI 180
Query: 90 THCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDKDNTERLQQWKEALSQ 149
C +TK LV P+F V+ +DV Y A+ H+K + D D +++W+ ALS
Sbjct: 181 VECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSD---EVKKWRSALSA 351
Query: 150 AANLSGQHYK 159
A L G + K
Sbjct: 352 MAKLEGHNVK 381
>AV409408
Length = 430
Score = 107 bits (266), Expect = 7e-24
Identities = 65/142 (45%), Positives = 90/142 (62%), Gaps = 4/142 (2%)
Frame = +2
Query: 366 GLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSLEKEEQSVFLDIAC 425
GLPLA+ ++GS L GRS+ D L +++P+ +I L++SYD LE E +++FLDIAC
Sbjct: 5 GLPLALEVLGSFLCGRSLSDWEDALIKIKKVPHDDILNKLRISYDMLEDEHKTLFLDIAC 184
Query: 426 CFKGCKWPEVKEILHAHYGHCIVH---HVAVLAEKSLMDHLKYDSYVT-LHDLIEDMGKE 481
FKG +V ++L G C +H + VL EKSL L +D V +HDL+E+MGK
Sbjct: 185 FFKGWYKHKVIQLL----GSCGLHPTVGINVLIEKSL---LTFDGRVIGMHDLLEEMGKT 343
Query: 482 VVRQESPDEPGERSRLWFERDI 503
V ESP++PG RSRLW DI
Sbjct: 344 EVFLESPNDPGRRSRLWSLEDI 409
>BP065014
Length = 498
Score = 101 bits (252), Expect = 3e-22
Identities = 56/118 (47%), Positives = 75/118 (63%)
Frame = -2
Query: 42 FIDDNDLQRGDEITPSLKNAIEKSRIFIPVFSENYASSSFCLDELVHITHCYDTKGCLVL 101
F DD L+ G I L AIE+SR+ I V SEN+A S +CL ELV I C K LVL
Sbjct: 497 FKDDLSLEDGAPIE-ELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 321
Query: 102 PVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDKDNTERLQQWKEALSQAANLSGQHYK 159
P+F V+PT++RH GRYGEA+A H+KK D ++ +++W +ALS + L G+ YK
Sbjct: 320 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKD---SQTVREWTQALSDISYLKGEPYK 156
>BP064315
Length = 350
Score = 89.0 bits (219), Expect = 2e-18
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Frame = +1
Query: 259 LGGVSQGIPIIKQRLCRKKILLILDDVDKLDQLEALAGGLDWFGPGSRVIITTRNKHLLK 318
+G +G IK+RL K++LL+LDDVDK+ QL+ALAGG DWFG GSR+IITTR+ +L
Sbjct: 25 MGSTFRGDFEIKRRLSNKRVLLVLDDVDKIKQLQALAGGGDWFGSGSRIIITTRDTTMLD 204
Query: 319 IHGIEST----HAVEGLNATEALELLRWMAFKENVPSSH 353
H ++ + +E LN ++LEL W AF + P+ +
Sbjct: 205 KHKMDDVIMKKYKMEELNDHDSLELFCWHAFNMSTPAEN 321
>AV410283
Length = 426
Score = 80.9 bits (198), Expect = 5e-16
Identities = 49/128 (38%), Positives = 72/128 (55%), Gaps = 5/128 (3%)
Frame = +1
Query: 256 DIKLGG----VSQGIPIIKQRLCRKKILLILDDVDKLDQLEALAGGLDWFGPGSRVIITT 311
D+ GG V+ G+ IK+ L K+LLILDDVD++ QL+ L G +WF GSRV+ITT
Sbjct: 19 DLSSGGTVNDVNDGVSAIKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGSRVVITT 198
Query: 312 RNKHLLKIHGIESTHAVEGLNATEALELLRWMAFKENVPS-SHEDILNRALTYASGLPLA 370
RN +L ++ + V L + AL L A + P+ ++ + + GLPLA
Sbjct: 199 RNTQVLPESYVDMFYEVRELELSAALALFCHHAMRRKKPAEGFSNLSKQIVKKTGGLPLA 378
Query: 371 IVIIGSNL 378
+ +IGS L
Sbjct: 379 LEVIGSFL 402
>TC12663 weakly similar to UP|Q84ZV8 (Q84ZV8) R 3 protein, partial (4%)
Length = 494
Score = 59.3 bits (142), Expect(2) = 9e-13
Identities = 27/41 (65%), Positives = 33/41 (79%)
Frame = +3
Query: 10 TYQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQR 50
T+ VFL+FRG+DT HGF L K+L DKGIYTFI+D +LQR
Sbjct: 24 TFNVFLNFRGSDTCHGFISFLCKSLLDKGIYTFINDEELQR 146
Score = 30.8 bits (68), Expect(2) = 9e-13
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = +2
Query: 52 DEITPSLKNAIEKSRIFIPVFSENYAS 78
DEITPSL AIE++RI IP ++ S
Sbjct: 149 DEITPSLVKAIERTRIAIPELYQDMLS 229
>BP065724
Length = 495
Score = 68.9 bits (167), Expect = 2e-12
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = -1
Query: 76 YASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDKD 135
YA SS+CL+E+V I C LV P+F V+P+DVRH Y +A+ + ++ D
Sbjct: 495 YADSSWCLEEVVKILECKQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKQETRYGKD-- 322
Query: 136 NTERLQQWKEALSQAANLSGQHYK 159
+E++++W+ +LSQ +L HYK
Sbjct: 321 -SEKVKKWRSSLSQVCDLKAFHYK 253
>AV427118
Length = 317
Score = 68.2 bits (165), Expect = 4e-12
Identities = 39/106 (36%), Positives = 59/106 (54%), Gaps = 9/106 (8%)
Frame = +3
Query: 434 EVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSYVTLHDLIEDMGKEVVRQESPDEPGE 493
EV+ IL AHY C+ +++ L K L++ + +TLH+ + +MGKE+VR++S P
Sbjct: 3 EVQHILRAHYRECVTDYISALVSKFLIN-ISSSGELTLHEWMRNMGKEIVRRKSSRMPCV 179
Query: 494 RSRLWFERDI--------GTRKIKMINMKFPSM-ESDIDWNGNAFE 530
SRLW +DI GT KI+ I + S E I W+G F+
Sbjct: 180 SSRLWILQDIRQVLEDCTGTHKIRTICLDLSSTEEGTISWDGKGFK 317
>AI967395
Length = 205
Score = 65.9 bits (159), Expect = 2e-11
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +3
Query: 62 IEKSRIFIPVFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGE 121
I++SR+ I VFSE+YA S+ CL+ELV+I LV PV+ GV+ ++RH GRYGE
Sbjct: 3 IQESRLIIVVFSEHYAVSASCLNELVNIVDVMIMNNQLVWPVYYGVEAPEIRHQRGRYGE 182
Query: 122 ALA 124
A+A
Sbjct: 183 AMA 191
>TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like protein
(Fragment), partial (36%)
Length = 859
Score = 63.5 bits (153), Expect = 9e-11
Identities = 34/104 (32%), Positives = 61/104 (57%)
Frame = +3
Query: 174 VGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVR 233
+G+ + H++ L ++S D V ++G++G GGIGK+T+A+ I+N Q+E +CFL V+
Sbjct: 549 IGVDKSIAHLESLLCQESKD-VRVIGIWGMGGIGKTTIAEEIFNRRHSQYEGICFLSKVK 725
Query: 234 VNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQGIPIIKQRLCRKK 277
++ L+EKL + D+K+ + IK+R+ R K
Sbjct: 726 DEL*KHGMQSLREKLFSTLLAQDVKIDTPNGMADDIKRRIGRMK 857
>TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like, partial
(5%)
Length = 689
Score = 62.8 bits (151), Expect = 1e-10
Identities = 27/61 (44%), Positives = 41/61 (66%)
Frame = -2
Query: 2 ATQSPSSFTYQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNA 61
++ S + Y VF++FRG DTRH F +LY AL++ G+ F+DD +L+RG E+ P L+
Sbjct: 229 SSSSNHQWIYDVFINFRGKDTRHSFVSHLYTALSNAGVNVFLDDENLERGLELEPELQKL 50
Query: 62 I 62
I
Sbjct: 49 I 47
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 61.2 bits (147), Expect = 4e-10
Identities = 57/192 (29%), Positives = 89/192 (45%), Gaps = 10/192 (5%)
Frame = +3
Query: 197 MVGLYGTGGIGKSTLAKAIYN--FIADQFEVLCFLENVRVNSTSDNLKHLQEKLLLKTVR 254
++ + G GG+GK+TL K +Y+ + F ++ + + L+ L +L + +R
Sbjct: 264 VISVTGMGGMGKTTLVKQVYDDPVVIKHFRACAWITVSQSCEIGELLRDLARQLFSE-IR 440
Query: 255 LDIKLGGVSQGIP----IIKQRLCRKKILLILDDVDKLDQLEALAGGLDWFGPGSRVIIT 310
+ LG + IIK L R++ L++ DDV + + EA+ L GSR++IT
Sbjct: 441 RPVPLGLENMRCDRLKMIIKDLLQRRRYLVVFDDVWHVREWEAVKYALPDNNCGSRIMIT 620
Query: 311 TRNKHLLKIHGIES---THAVEGLNATEALELLRWMAFK-ENVPSSHEDILNRALTYASG 366
TR L ES + ++ L EA EL F ++ PS I L G
Sbjct: 621 TRRSDLAFTSSTESKGKVYNLQPLKEDEAWELFCRKTFHGDSCPSHLIGICTYILRKCEG 800
Query: 367 LPLAIVIIGSNL 378
LPLAIV I L
Sbjct: 801 LPLAIVAISGVL 836
>AW428699
Length = 319
Score = 59.3 bits (142), Expect = 2e-09
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +3
Query: 398 NKEIQRILKVSYDSLEKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEK 457
+K+I ++K + SL+ E+ VFLDI C +G +V+ IL AHYG C+ ++ VL +K
Sbjct: 84 DKKIHNMVKKRFYSLKMAEKRVFLDIVCYGEGYHLVDVQHILRAHYGCCVTDYIRVLVDK 263
Query: 458 SLMDHLKYDSYVTLHDLIE 476
SL+ H+ S TLH E
Sbjct: 264 SLI-HISPRSEKTLHHWAE 317
>TC12592
Length = 534
Score = 55.5 bits (132), Expect = 2e-08
Identities = 26/58 (44%), Positives = 39/58 (66%)
Frame = +3
Query: 99 LVLPVFIGVDPTDVRHHTGRYGEALAVHKKKFQNDKDNTERLQQWKEALSQAANLSGQ 156
LVLPVF GV+PTD+R+ G++GEA+A + KF D + + +WK+AL + L G+
Sbjct: 6 LVLPVFYGVEPTDIRNLKGKFGEAMAEIENKFGKDSNT---IHEWKQALRDISYLKGE 170
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,815,611
Number of Sequences: 28460
Number of extensions: 130432
Number of successful extensions: 743
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of query: 576
length of database: 4,897,600
effective HSP length: 95
effective length of query: 481
effective length of database: 2,193,900
effective search space: 1055265900
effective search space used: 1055265900
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC138133.14