BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138133.1 + phase: 0 /pseudo
(1092 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (... 154 6e-38
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 149 2e-36
AV406755 128 6e-30
CB828263 126 2e-29
AV778571 124 1e-28
AV409408 121 7e-28
AV779547 120 1e-27
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 120 1e-27
BP045440 108 6e-24
BP065014 104 9e-23
BP064315 103 2e-22
AV410283 101 7e-22
AV774918 70 7e-15
AV427118 78 9e-15
BP065724 76 3e-14
AI967395 69 3e-12
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 69 4e-12
TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like... 67 2e-11
TC12663 weakly similar to UP|Q84ZV8 (Q84ZV8) R 3 protein, partia... 55 5e-11
TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-... 63 2e-10
>TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (28%)
Length = 918
Score = 154 bits (390), Expect = 6e-38
Identities = 96/263 (36%), Positives = 153/263 (57%), Gaps = 2/263 (0%)
Frame = +1
Query: 345 EKTYAVEELNETEALELLRWKAFKNEKVPSSYEDILKRAVVYASGLPLAIEVVGSNLFGK 404
++ Y V+E++ ++L+L AFK +Y D+ K+ + YA G+PLA++V+G L+G+
Sbjct: 4 DEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYGR 183
Query: 405 SIAECESTLDKYGRIPHKDIQKILRLSYDALDEEEQSVFLDIACCIKGCRLEEVEQILHH 464
ES L K ++P +I +L+LSYD LD++++ +FLDIAC G E V Q L
Sbjct: 184 ERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTL-D 360
Query: 465 HYGYSIKSHLRVLVDKSLIKISWCFFSGIKVTLHELIEVMGKEVVRQESPKEPGERSRLW 524
G+ + VL D+ LI I G ++ +H+LIEVMGKE+VRQ+ P +PG+RSRLW
Sbjct: 361 SCGFFADIGMEVLKDRCLISI----LEG-RIVMHDLIEVMGKEIVRQQCPNDPGKRSRLW 525
Query: 525 SQDDIVHVLTENTGTGKTEMICMNLHSME-SVIDKKGKAFKKMTRLKTL-IIENGHCSKG 582
+ D VL +N GT + C+ L++ +++ + FK MT L+ L ++ CS
Sbjct: 526 NDDQTYDVLGKNKGTDAIQ--CIFLYTCPIKIVNLHAETFKYMTNLRMLQFYKSRVCSLA 699
Query: 583 LKHLPSSLKALKWEGCLSKSLSS 605
L+ PS + W+ S ++SS
Sbjct: 700 LECDPS---CISWKSPESFTISS 759
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 149 bits (376), Expect = 2e-36
Identities = 82/159 (51%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Frame = +1
Query: 16 YQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSL-LKAIEESRIFI 74
Y VF++ SDTR+GF+G+LY AL DKGI TFID+ L R D+I ++ KAIE SRI I
Sbjct: 103 YDVFISLITSDTRFGFSGDLYTALSDKGILTFIDDG-LPRPDDIMSTVNSKAIESSRIAI 279
Query: 75 AVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKR 134
V S NYASSSFCLDEL++I+ + KG L+ PVF+ VEP+ VR+QKG +G+A A HE+R
Sbjct: 280 VVISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVRYQKGGFGKAFASHEER 459
Query: 135 FQNDPKSMERLQGWKEALSQAANLSGYHDSPPGYEYKLI 173
F +D + + W+ AL Q A+L +H GY LI
Sbjct: 460 FGSDSAKVRK---WRNALKQVADLKAFHFFKHGYHTSLI 567
>AV406755
Length = 425
Score = 128 bits (321), Expect = 6e-30
Identities = 63/115 (54%), Positives = 86/115 (74%)
Frame = +3
Query: 13 EYKYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRI 72
++ Y VFL+FRG ++R FT +LY AL + GI F+DN ELQRG++I+ SLLKAIE+SRI
Sbjct: 75 KWSYDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMDN-ELQRGEDISSSLLKAIEDSRI 251
Query: 73 FIAVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEA 127
I +FS NY S +CLDEL II C +T G+ V+PVF+ V+P+ +R Q+G+ GEA
Sbjct: 252 AIIIFSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRKQRGTVGEA 416
>CB828263
Length = 570
Score = 126 bits (317), Expect = 2e-29
Identities = 62/136 (45%), Positives = 98/136 (71%)
Frame = +2
Query: 51 HELQRGDEITPSLLKAIEESRIFIAVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFF 110
++LQRGDEI+ SLL+AIEE+++ + VFS NY +S +CLDELV I+ C +T+G++VLPVF+
Sbjct: 2 YDLQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFY 181
Query: 111 AVEPTIVRHQKGSYGEALAEHEKRFQNDPKSMERLQGWKEALSQAANLSGYHDSPPGYEY 170
++P+ VR+Q G+Y EA +H + ++++Q W+EAL +AANLSG+ S E
Sbjct: 182 DIDPSHVRNQTGTYAEAFVKHGQ--------VDKVQKWREALREAANLSGWDCSVNRMES 337
Query: 171 KLIGKIVKYISNKISQ 186
++I KI K + K+++
Sbjct: 338 EVIEKIAKDVLEKLNR 385
>AV778571
Length = 452
Score = 124 bits (310), Expect = 1e-28
Identities = 68/128 (53%), Positives = 84/128 (65%)
Frame = +3
Query: 649 ILDHCEYLTHIPDVSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLSAFGCRKLKRFPP 708
+ CE +T IPD+SGL NLEKLSF NLI IH S+G LNKL L GC K++ FPP
Sbjct: 33 VSSECESITQIPDLSGLPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFPP 212
Query: 709 LGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSELDELSVR 768
+ LASL+EL + CSSL+SFPE+L KM NI I + Y+ I ELPSS NL+ L L +
Sbjct: 213 MKLASLEELYLSHCSSLESFPEILAKMENITLIGV-YHTPIKELPSSIGNLTRLRRLELH 389
Query: 769 EARMLRFP 776
ML+ P
Sbjct: 390 GCGMLQLP 413
>AV409408
Length = 430
Score = 121 bits (303), Expect = 7e-28
Identities = 68/148 (45%), Positives = 95/148 (63%)
Frame = +2
Query: 389 GLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILRLSYDALDEEEQSVFLDIAC 448
GLPLA+EV+GS L G+S+++ E L K ++PH DI LR+SYD L++E +++FLDIAC
Sbjct: 5 GLPLALEVLGSFLCGRSLSDWEDALIKIKKVPHDDILNKLRISYDMLEDEHKTLFLDIAC 184
Query: 449 CIKGCRLEEVEQILHHHYGYSIKSHLRVLVDKSLIKISWCFFSGIKVTLHELIEVMGKEV 508
KG +V Q+L G + VL++KSL+ F G + +H+L+E MGK
Sbjct: 185 FFKGWYKHKVIQLL-GSCGLHPTVGINVLIEKSLLT-----FDGRVIGMHDLLEEMGKTE 346
Query: 509 VRQESPKEPGERSRLWSQDDIVHVLTEN 536
V ESP +PG RSRLWS +DI VL +N
Sbjct: 347 VFLESPNDPGRRSRLWSLEDIDQVLRKN 430
>AV779547
Length = 556
Score = 120 bits (301), Expect = 1e-27
Identities = 67/142 (47%), Positives = 93/142 (65%)
Frame = +1
Query: 20 LNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFIAVFSI 79
++FRG DTR FT +L AL KG TF D+ L++G I+ L++AIE S+I I VFS
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 80 NYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDP 139
YASS++CL EL I K + VLPV V P+ VR Q G+YGEA +HE+RF+ D
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQSGNYGEAFLKHEERFKED- 465
Query: 140 KSMERLQGWKEALSQAANLSGY 161
+E +Q W++AL++ A+LSG+
Sbjct: 466 --LEMVQRWRKALAEVADLSGW 525
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 120 bits (301), Expect = 1e-27
Identities = 66/144 (45%), Positives = 90/144 (61%)
Frame = +1
Query: 35 LYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFIAVFSINYASSSFCLDELVHI 94
LY AL +G TF+D+ L G+EI SLL A E+SR+ I VFS NY SS+CLDELV I
Sbjct: 1 LYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKI 180
Query: 95 IHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDPKSMERLQGWKEALSQ 154
+ C +TK +LV P+F+ VE + V Q+ SY A+ HEK + D +++ W+ ALS
Sbjct: 181 VECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKK---WRSALSA 351
Query: 155 AANLSGYHDSPPGYEYKLIGKIVK 178
A L G++ YEY+ I KIV+
Sbjct: 352 MAKLEGHNVKENKYEYEFIKKIVE 423
>BP045440
Length = 535
Score = 108 bits (269), Expect = 6e-24
Identities = 65/156 (41%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Frame = -3
Query: 15 KYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFI 74
+YQ+F++FRG DTR FT LY+ L +G TF D+ L+ G I LL IEESR I
Sbjct: 530 RYQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPI-EKLLDDIEESRFAI 354
Query: 75 AVFSINYASSSFCLDELVHIIHCYKTKGR--LVLPVFFAVEPTIVRHQKGSYGEALAEHE 132
+ S NYA S +CL EL I+ C +G+ LVLP V PT VRH Y +A+A+HE
Sbjct: 353 IILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVRHVINRYADAMAKHE 174
Query: 133 KRFQNDPKSMERLQGWKEALSQAANLSGYHDSPPGY 168
K + + +Q WK+AL L+G+ Y
Sbjct: 173 K----NGIDSKTIQAWKKALFDVCTLTGFEKPSDWY 78
>BP065014
Length = 498
Score = 104 bits (259), Expect = 9e-23
Identities = 61/126 (48%), Positives = 78/126 (61%)
Frame = -2
Query: 47 FIDNHELQRGDEITPSLLKAIEESRIFIAVFSINYASSSFCLDELVHIIHCYKTKGRLVL 106
F D+ L+ G I LL AIEESR+ I V S N+A S +CL ELV I+ C K K LVL
Sbjct: 497 FKDDLSLEDGAPIE-ELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 321
Query: 107 PVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDPKSMERLQGWKEALSQAANLSGYHDSPP 166
P+F+ VEPT +RH KG YGEA+AEHEK+ D +++ W +ALS + L G +
Sbjct: 320 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVRE---WTQALSDISYLKG--EPYK 156
Query: 167 GYEYKL 172
GY KL
Sbjct: 155 GYVVKL 138
>BP064315
Length = 350
Score = 103 bits (256), Expect = 2e-22
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
Frame = +1
Query: 278 EIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLEALAGRLDWFGPGSRVIITTRDKH 337
E +GS G +IK RL K++LL+LDDVDK+ QL+ALAG DWFG GSR+IITTRD
Sbjct: 16 ETMMGSTFRGDFEIKRRLSNKRVLLVLDDVDKIKQLQALAGGGDWFGSGSRIIITTRDTT 195
Query: 338 LLDCHGIE----KTYAVEELNETEALELLRWKAFKNEKVPSSYEDILKRAV 384
+LD H ++ K Y +EELN+ ++LEL W AF ++E + AV
Sbjct: 196 MLDKHKMDDVIMKKYKMEELNDHDSLELFCWHAFNMSTPAENFEGVSSHAV 348
>AV410283
Length = 426
Score = 101 bits (251), Expect = 7e-22
Identities = 56/137 (40%), Positives = 80/137 (57%)
Frame = +1
Query: 268 QELLLKTLQLEIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQLEALAGRLDWFGPGS 327
Q +L L + V++G+ IK L G K+LLILDDVD++ QL+ L G +WF GS
Sbjct: 1 QNRILGDLSSGGTVNDVNDGVSAIKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGS 180
Query: 328 RVIITTRDKHLLDCHGIEKTYAVEELNETEALELLRWKAFKNEKVPSSYEDILKRAVVYA 387
RV+ITTR+ +L ++ Y V EL + AL L A + +K + ++ K+ V
Sbjct: 181 RVVITTRNTQVLPESYVDMFYEVRELELSAALALFCHHAMRRKKPAEGFSNLSKQIVKKT 360
Query: 388 SGLPLAIEVVGSNLFGK 404
GLPLA+EV+GS LF K
Sbjct: 361 GGLPLALEVIGSFLFDK 411
>AV774918
Length = 541
Score = 70.5 bits (171), Expect(2) = 7e-15
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -1
Query: 788 SKVTKLRIYECNLSDEYLQIVLKWCVNVELLDLSHNNFKILPECLSECHHLKHLGLHYCS 847
S + L C+LSDE+L +VL + N++ LDLSH++F PEC+ ECH L L + C
Sbjct: 376 SNIESLSFIRCHLSDEFLLLVLPFFANLKELDLSHSDFTFAPECIKECHSLWWLQVDRCD 197
Query: 848 SLEEIRGIP 856
L EI+GIP
Sbjct: 196 ELREIKGIP 170
Score = 27.7 bits (60), Expect(2) = 7e-15
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2
Query: 848 SLEEIRGIPPNLKELSAYQCKSLS 871
+ E+++G P+LK LSA +C SLS
Sbjct: 195 NFEKLKGFRPSLKYLSAEECISLS 124
>AV427118
Length = 317
Score = 77.8 bits (190), Expect = 9e-15
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +3
Query: 457 EVEQILHHHYGYSIKSHLRVLVDKSLIKISWCFFSGIKVTLHELIEVMGKEVVRQESPKE 516
EV+ IL HY + ++ LV K LI IS S ++TLHE + MGKE+VR++S +
Sbjct: 3 EVQHILRAHYRECVTDYISALVSKFLINIS----SSGELTLHEWMRNMGKEIVRRKSSRM 170
Query: 517 PGERSRLWSQDDIVHVLTENTGTGKTEMICMNLHSM-ESVIDKKGKAFK 564
P SRLW DI VL + TGT K IC++L S E I GK FK
Sbjct: 171 PCVSSRLWILQDIRQVLEDCTGTHKIRTICLDLSSTEEGTISWDGKGFK 317
>BP065724
Length = 495
Score = 76.3 bits (186), Expect = 3e-14
Identities = 34/82 (41%), Positives = 55/82 (66%)
Frame = -1
Query: 81 YASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDPK 140
YA SS+CL+E+V I+ C + +LV P+F+ VEP+ VRHQ+ SY +A+ + E R+ D
Sbjct: 495 YADSSWCLEEVVKILECKQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKQETRYGKD-- 322
Query: 141 SMERLQGWKEALSQAANLSGYH 162
E+++ W+ +LSQ +L +H
Sbjct: 321 -SEKVKKWRSSLSQVCDLKAFH 259
>AI967395
Length = 205
Score = 69.3 bits (168), Expect = 3e-12
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3
Query: 67 IEESRIFIAVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGE 126
I+ESR+ I VFS +YA S+ CL+ELV+I+ +LV PV++ VE +RHQ+G YGE
Sbjct: 3 IQESRLIIVVFSEHYAVSASCLNELVNIVDVMIMNNQLVWPVYYGVEAPEIRHQRGRYGE 182
Query: 127 ALAEHEK 133
A+A+ E+
Sbjct: 183 AMAKFEE 203
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 68.9 bits (167), Expect = 4e-12
Identities = 55/195 (28%), Positives = 92/195 (46%), Gaps = 9/195 (4%)
Frame = +3
Query: 219 MVGIYGIGGLGKSTLAKAIYN--FIADQFECSCFLENVKESSASNNLKNLQQELLLKTLQ 276
++ + G+GG+GK+TL K +Y+ + F ++ + L++L ++L + ++
Sbjct: 264 VISVTGMGGMGKTTLVKQVYDDPVVIKHFRACAWITVSQSCEIGELLRDLARQLFSE-IR 440
Query: 277 LEIKLGSVSEGIPK----IKERLHGKKILLILDDVDKLDQLEALAGRLDWFGPGSRVIIT 332
+ LG + + IK+ L ++ L++ DDV + + EA+ L GSR++IT
Sbjct: 441 RPVPLGLENMRCDRLKMIIKDLLQRRRYLVVFDDVWHVREWEAVKYALPDNNCGSRIMIT 620
Query: 333 TRDKHLLDCHGIE---KTYAVEELNETEALELLRWKAFKNEKVPSSYEDILKRAVVYASG 389
TR L E K Y ++ L E EA EL K F + PS I + G
Sbjct: 621 TRRSDLAFTSSTESKGKVYNLQPLKEDEAWELFCRKTFHGDSCPSHLIGICTYILRKCEG 800
Query: 390 LPLAIEVVGSNLFGK 404
LPLAI + L K
Sbjct: 801 LPLAIVAISGVLATK 845
>TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like, partial
(5%)
Length = 689
Score = 66.6 bits (161), Expect = 2e-11
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = -2
Query: 6 SSTSISYEYKYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLK 65
SS+S ++++ Y VF+NFRG DTR+ F +LY AL + G++ F+D+ L+RG E+ P L K
Sbjct: 232 SSSSSNHQWIYDVFINFRGKDTRHSFVSHLYTALSNAGVNVFLDDENLERGLELEPELQK 53
Query: 66 AI 67
I
Sbjct: 52 LI 47
>TC12663 weakly similar to UP|Q84ZV8 (Q84ZV8) R 3 protein, partial (4%)
Length = 494
Score = 55.1 bits (131), Expect(2) = 5e-11
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 11 SYEYKYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQR 55
S+ + VFLNFRGSDT +GF L K+L DKGI+TFI++ ELQR
Sbjct: 12 SHVLTFNVFLNFRGSDTCHGFISFLCKSLLDKGIYTFINDEELQR 146
Score = 30.0 bits (66), Expect(2) = 5e-11
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 57 DEITPSLLKAIEESRIFI 74
DEITPSL+KAIE +RI I
Sbjct: 149 DEITPSLVKAIERTRIAI 202
>TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing
protein TSDC, partial (11%)
Length = 494
Score = 63.2 bits (152), Expect = 2e-10
Identities = 34/76 (44%), Positives = 46/76 (59%)
Frame = +1
Query: 103 RLVLPVFFAVEPTIVRHQKGSYGEALAEHEKRFQNDPKSMERLQGWKEALSQAANLSGYH 162
+LV P+F+ + + V +Q SYG A+ HE F D E++Q WK ALS+ A L G H
Sbjct: 4 QLVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDS---EKVQKWKSALSEMAFLQGEH 174
Query: 163 DSPPGYEYKLIGKIVK 178
+ YEYKLI KIV+
Sbjct: 175 ITENEYEYKLIQKIVE 222
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,001,313
Number of Sequences: 28460
Number of extensions: 321286
Number of successful extensions: 1779
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 1745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1760
length of query: 1092
length of database: 4,897,600
effective HSP length: 100
effective length of query: 992
effective length of database: 2,051,600
effective search space: 2035187200
effective search space used: 2035187200
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC138133.1