BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137996.5 + phase: 0
(713 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%) 413 e-116
TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%) 389 e-110
TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa pro... 310 6e-87
BP040870 260 6e-70
BP044919 245 2e-65
BP041494 167 3e-62
TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat... 214 3e-56
TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment),... 208 3e-54
AW720237 198 2e-51
BP064075 164 6e-41
TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, p... 130 9e-31
AV769455 120 6e-28
BP083571 117 5e-27
BP033771 107 7e-24
CB827219 103 9e-23
AV766006 97 9e-21
AW163930 92 2e-19
TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein ... 77 1e-14
AV409958 74 1e-13
AW428869 72 2e-13
>TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%)
Length = 1570
Score = 413 bits (1062), Expect = e-116
Identities = 228/407 (56%), Positives = 296/407 (72%), Gaps = 4/407 (0%)
Frame = +1
Query: 215 VSILTIKGDVFDVKATAGNTHLGGEDFDNRMVYYFVEEFKKKNKVEISGNPKSLRRLRTA 274
VS+LTI+ +F+VKATAG+THLGGEDFDNRMV +FV+EFK+KNK +ISGNP++LRRLRTA
Sbjct: 1 VSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTA 180
Query: 275 CERAKRILSFTFVTTVEVDALFMGIDFSSSITRAKFEEINMDFFNECINIVDSCLRDSKI 334
CERAKR LS T TT+E+D+L+ GIDF S ITRA+FEE+NMD F +C+ V+ CLRD+K+
Sbjct: 181 CERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKM 360
Query: 335 YKNDIDDVVLVGGSSRIPKVQDLLLEFFKGKALFMNINPDEAIAYGAAVQAAILS-EDFK 393
K + DVVLVGGS+RIPKVQ LL +FF GK L +INPDEA+AYGAAVQAAILS E +
Sbjct: 361 DKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE 540
Query: 394 NVPNLVLRDVTPLSLGIATATYWENIMDVVIPRNTSIPVKNTKGYCTAIDN-CGASIIVY 452
V +L+L DVTPLSLG+ TA +M V+IPRNT+IP K + + T DN G I V+
Sbjct: 541 KVQDLLLLDVTPLSLGLETA---GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVF 711
Query: 453 EGERPRASDNNLLGLFTLSCL-PGPRGQP-LEVCFSIDENGILTVSGKDITTGILNEITI 510
EGER R DNNLLG F LS + P PRG P + VCF ID NGIL VS +D TTG N+ITI
Sbjct: 712 EGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITI 891
Query: 511 TNEKERLSKFEIEKKIEEAEKYRVEDMKFLRKAKVISALDSCVYNIKSALNMKDVDLILS 570
TN+K RLSK +IEK ++EAEKY+ ED + +K + +AL++ YN+++ + + + L
Sbjct: 892 TNDKGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIAGKLD 1071
Query: 571 PQESEQINNAIIVAMNLLEMNKNNQHIEIDVLEHHLKEMNSMLNMLL 617
+ +I +AI A+ LE +NQ E D E +KE+ S+ N ++
Sbjct: 1072SADKTKIEDAIEQAIQWLE---SNQLAEADEFEDKMKELESICNPII 1203
>TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%)
Length = 1528
Score = 389 bits (998), Expect(2) = e-110
Identities = 214/385 (55%), Positives = 278/385 (71%), Gaps = 4/385 (1%)
Frame = +3
Query: 237 GGEDFDNRMVYYFVEEFKKKNKVEISGNPKSLRRLRTACERAKRILSFTFVTTVEVDALF 296
GGEDFDNRMV +FV+EFK+KNK +ISGNP++LRRLRTACERAKR LS T TT+E+D+L+
Sbjct: 48 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY 227
Query: 297 MGIDFSSSITRAKFEEINMDFFNECINIVDSCLRDSKIYKNDIDDVVLVGGSSRIPKVQD 356
GIDF S ITRA+FEE+NMD F +C+ V+ CLRD+K+ K + DVVLVGGS+RIPKVQ
Sbjct: 228 EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQ 407
Query: 357 LLLEFFKGKALFMNINPDEAIAYGAAVQAAILS-EDFKNVPNLVLRDVTPLSLGIATATY 415
LL +FF GK L +INPDEA+AYGAAVQAAILS E + V +L+L DVTPLSLG+ TA
Sbjct: 408 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETA-- 581
Query: 416 WENIMDVVIPRNTSIPVKNTKGYCTAIDN-CGASIIVYEGERPRASDNNLLGLFTLSCL- 473
+M V+IPRNT+IP K + + T DN G I VYEGER R DNNLLG F LS +
Sbjct: 582 -GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIP 758
Query: 474 PGPRGQP-LEVCFSIDENGILTVSGKDITTGILNEITITNEKERLSKFEIEKKIEEAEKY 532
P PRG P + VCF ID NGIL VS +D TTG N+ITITN+K RLSK +IEK ++EAEKY
Sbjct: 759 PAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKY 938
Query: 533 RVEDMKFLRKAKVISALDSCVYNIKSALNMKDVDLILSPQESEQINNAIIVAMNLLEMNK 592
+ ED + +K + +AL++ YN+++ + + + L P + ++I +AI A+ L+
Sbjct: 939 KSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLD--- 1109
Query: 593 NNQHIEIDVLEHHLKEMNSMLNMLL 617
+NQ E D E +KE+ S+ N ++
Sbjct: 1110SNQLAEADEFEDKMKELESICNPII 1184
Score = 26.6 bits (57), Expect(2) = e-110
Identities = 10/13 (76%), Positives = 13/13 (99%)
Frame = +1
Query: 224 VFDVKATAGNTHL 236
+F+VKATAG+THL
Sbjct: 10 IFEVKATAGDTHL 48
>TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (74%)
Length = 1752
Score = 310 bits (794), Expect(2) = 6e-87
Identities = 189/385 (49%), Positives = 247/385 (64%), Gaps = 9/385 (2%)
Frame = +3
Query: 135 EIAEAYLGSPVKNVVVTVPAYFNDSQRKATIDAGAIAGLNVIRILNEPTAAAIAYGLDKR 194
E AEAYLG V V+TVPAYFND+ R+AT DAG IAGL+V RI+NEPTAAA++YG+ +
Sbjct: 3 ETAEAYLGKSVSKAVITVPAYFNDAHRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNK 182
Query: 195 SNYDGKRNILVFDLGGGTFDVSILTIKGDVFDVKATAGNTHLGGEDFDNRMVYYFVEEFK 254
I VFDLGGGTFDVSIL I VF+VKAT G+T LGGEDFDN ++ + V+EFK
Sbjct: 183 EGL-----IAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFK 347
Query: 255 KKNKVEISGNPKSLRRLRTACERAKRILSFTFVTTVEVDALFMGIDFSS------SITRA 308
+ +++S + +L+RLR A E+AK LS T T E++ F+ D S ++TR+
Sbjct: 348 RTESIDLSKDKLALQRLREAAEKAKIELSSTSQT--EINLPFITADASGAKHLNITLTRS 521
Query: 309 KFEEINMDFFNECINIVDSCLRDSKIYKNDIDDVVLVGGSSRIPKVQDLLLEFFKGKALF 368
KFE + +CL+D+ I ++D+V+LVGG +R+PKVQ+++ F GK+
Sbjct: 522 KFEALVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIF-GKSPS 698
Query: 369 MNINPDEAIAYGAAVQAAILSEDFKNVPNLVLRDVTPLSLGIATATYWENIMDVVIPRNT 428
+NPDEA+A GAA+Q IL D K L+L DVTPLSLGI T I +I RNT
Sbjct: 699 KGVNPDEAVAMGAAIQGGILRGDVK---ELLLLDVTPLSLGIETL---GGIFTRLINRNT 860
Query: 429 SIPVKNTKGYCTAIDN-CGASIIVYEGERPRASDNNLLGLFTLSCL-PGPRGQP-LEVCF 485
+IP K ++ + TA DN I V +GER ASDN LG F L + P PRG P +EV F
Sbjct: 861 TIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTF 1040
Query: 486 SIDENGILTVSGKDITTGILNEITI 510
ID NGI+TVS KD +TG +ITI
Sbjct: 1041DIDANGIVTVSAKDKSTGKEQQITI 1115
Score = 28.9 bits (63), Expect(2) = 6e-87
Identities = 14/44 (31%), Positives = 27/44 (60%)
Frame = +2
Query: 517 LSKFEIEKKIEEAEKYRVEDMKFLRKAKVISALDSCVYNIKSAL 560
LS EIEK ++EAE + +D + + ++ D+ +Y+I+ +L
Sbjct: 1133 LSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEKSL 1264
>BP040870
Length = 505
Score = 260 bits (664), Expect = 6e-70
Identities = 125/167 (74%), Positives = 151/167 (89%)
Frame = +2
Query: 111 VKYKGQEKQFCAEEISSAVLTKMREIAEAYLGSPVKNVVVTVPAYFNDSQRKATIDAGAI 170
V YKG+EKQF AEEISS VL KM+EIAEAYLG+ +KN VVTVPAYFNDSQR+AT DAG I
Sbjct: 5 VNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI 184
Query: 171 AGLNVIRILNEPTAAAIAYGLDKRSNYDGKRNILVFDLGGGTFDVSILTIKGDVFDVKAT 230
+GLNV+RI+NEPTAAAIAYGLDK++ G++N+L+FDLGGGTFDVS+LTI+ +F+VK+T
Sbjct: 185 SGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKST 364
Query: 231 AGNTHLGGEDFDNRMVYYFVEEFKKKNKVEISGNPKSLRRLRTACER 277
AG+THLGGEDFDNRMV +FV+EFK+KNK +ISGN ++LRRLRTACER
Sbjct: 365 AGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACER 505
>BP044919
Length = 519
Score = 245 bits (625), Expect = 2e-65
Identities = 117/164 (71%), Positives = 142/164 (86%)
Frame = +3
Query: 80 GRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYKGQEKQFCAEEISSAVLTKMREIAEA 139
GRKYSD ++Q+D+ LWPF V +G +DKPMI VK+KG+EK+ EEISS VL+KM+EIAEA
Sbjct: 27 GRKYSDSVIQEDVKLWPFKVIAGTDDKPMIVVKHKGEEKKLVPEEISSMVLSKMKEIAEA 206
Query: 140 YLGSPVKNVVVTVPAYFNDSQRKATIDAGAIAGLNVIRILNEPTAAAIAYGLDKRSNYDG 199
+L S VKN VVTVPAYFND+QRKAT DAG IAGLNV+RI+NEPTAAA+AYGL KR+N G
Sbjct: 207 FLESSVKNAVVTVPAYFNDAQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRANLVG 386
Query: 200 KRNILVFDLGGGTFDVSILTIKGDVFDVKATAGNTHLGGEDFDN 243
+RN+ +FDLGGGTFDVS+LTIK D F+VKAT+G+THLG +DFDN
Sbjct: 387 ERNVFIFDLGGGTFDVSLLTIKDDNFEVKATSGDTHLGXKDFDN 518
>BP041494
Length = 572
Score = 167 bits (424), Expect(2) = 3e-62
Identities = 85/110 (77%), Positives = 93/110 (84%)
Frame = +3
Query: 74 DAKRLIGRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYKGQEKQFCAEEISSAVLTKM 133
DAKRLIGRK+SD V+ D+ LWPF V SG D+PMI V YK +EKQF AEEISS VL KM
Sbjct: 243 DAKRLIGRKFSDDSVESDMKLWPFKVISGPVDRPMIVVNYKNEEKQFTAEEISSMVLIKM 422
Query: 134 REIAEAYLGSPVKNVVVTVPAYFNDSQRKATIDAGAIAGLNVIRILNEPT 183
REIAEAYLGS VKNVVVTVPAYFNDSQR+AT DAG IAGLNV+RI+NEPT
Sbjct: 423 REIAEAYLGSTVKNVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT 572
Score = 88.6 bits (218), Expect(2) = 3e-62
Identities = 44/63 (69%), Positives = 51/63 (80%)
Frame = +1
Query: 1 MARKYEGRAVGIDLGTTYSCVAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGA 60
M + E A+GIDLGTTYSCV VW +D RVEII NDQGNRTTPS VAFTD++RLIG+ A
Sbjct: 61 MVGEGESPAIGIDLGTTYSCVGVWQND--RVEIIPNDQGNRTTPSYVAFTDFERLIGDAA 234
Query: 61 ENQ 63
+NQ
Sbjct: 235 KNQ 243
>TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat shock
cognate protein 70, partial (23%)
Length = 508
Score = 214 bits (546), Expect = 3e-56
Identities = 111/152 (73%), Positives = 122/152 (80%)
Frame = +2
Query: 1 MARKYEGRAVGIDLGTTYSCVAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGA 60
MA K EG A+GIDLGTTYSCV VW H+RVEII NDQGNRTTPS VAFTD +RLIG+ A
Sbjct: 59 MAGKGEGPAIGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAA 232
Query: 61 ENQSATNPENTVFDAKRLIGRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYKGQEKQF 120
+NQ A NP NTVFDAKRLIGR+ SD VQ D+ LWPF V SG +KPMI V YKG++KQF
Sbjct: 233 KNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQF 412
Query: 121 CAEEISSAVLTKMREIAEAYLGSPVKNVVVTV 152
AEEISS VL KMREIAEAYLGS +KN VVTV
Sbjct: 413 AAEEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
>TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment), partial
(63%)
Length = 981
Score = 208 bits (529), Expect = 3e-54
Identities = 109/178 (61%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Frame = +1
Query: 7 GRAVGIDLGTTYSCVAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGAENQSAT 66
G +GIDLGTTYSCV V+ + H VEII NDQGNR TPS VAF D +RLIG A+NQ A
Sbjct: 145 GTVIGIDLGTTYSCVGVYRNGH--VEIIANDQGNRITPSWVAFNDGERLIGEAAKNQFAV 318
Query: 67 NPENTVFDAKRLIGRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYK-GQEKQFCAEEI 125
NPE T+FD KRLIGRK+ D VQ+D+ L P+ + + + KP I VK K G+ K F EE+
Sbjct: 319 NPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNK-DGKPYIQVKIKDGETKVFSPEEV 495
Query: 126 SSAVLTKMREIAEAYLGSPVKNVVVTVPAYFNDSQRKATIDAGAIAGLNVIRILNEPT 183
S+ +LTKM+E AEA+LG + + VVTVPAYFND+QR+AT DAG IAGLNV RI+NEPT
Sbjct: 496 SAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPT 669
Score = 123 bits (309), Expect = 9e-29
Identities = 65/111 (58%), Positives = 83/111 (74%)
Frame = +2
Query: 173 LNVIRILNEPTAAAIAYGLDKRSNYDGKRNILVFDLGGGTFDVSILTIKGDVFDVKATAG 232
L ++ + P AAAIAYGLDK+ G++NILVFDLGGGTFDVSILTI VF+V AT G
Sbjct: 638 LMLLELSMNPPAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLATNG 808
Query: 233 NTHLGGEDFDNRMVYYFVEEFKKKNKVEISGNPKSLRRLRTACERAKRILS 283
+THLGGEDFD R++ YF++ KKK+ +IS + ++L +LR ERAKR LS
Sbjct: 809 DTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 961
>AW720237
Length = 459
Score = 198 bits (504), Expect = 2e-51
Identities = 97/144 (67%), Positives = 117/144 (80%)
Frame = +3
Query: 6 EGRAVGIDLGTTYSCVAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGAENQSA 65
+ A+GIDLGTTYSCV VW++D RVEII NDQGNRTTPS V FT+ +RLIG+ A+NQ A
Sbjct: 33 QATAIGIDLGTTYSCVGVWMND--RVEIIANDQGNRTTPSYVGFTESERLIGDAAKNQVA 206
Query: 66 TNPENTVFDAKRLIGRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYKGQEKQFCAEEI 125
NP NTVFDAKRLIGRK+ DPIVQKDI LWPF V +G + KP+I VKYKG+ K+F AE++
Sbjct: 207 RNPINTVFDAKRLIGRKFDDPIVQKDIKLWPFKVEAGPDGKPLIAVKYKGETKKFHAEQV 386
Query: 126 SSAVLTKMREIAEAYLGSPVKNVV 149
SS VLTKM+E AEAYL +K++V
Sbjct: 387 SSMVLTKMKETAEAYLNKTIKDIV 458
>BP064075
Length = 554
Score = 164 bits (414), Expect = 6e-41
Identities = 87/157 (55%), Positives = 115/157 (72%), Gaps = 1/157 (0%)
Frame = -2
Query: 289 TVEVDALFMGIDFSSSITRAKFEEINMDFFNECINIVDSCLRDSKIYKNDIDDVVLVGGS 348
T+E+D L+ GIDF SSITRAKFEE+N D+F +C+ +V+ C+ DSK+ K++I DVVLVGGS
Sbjct: 553 TIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGS 374
Query: 349 SRIPKVQDLLLEFFKGKALFMNINPDEAIAYGAAVQAAILSEDF-KNVPNLVLRDVTPLS 407
SRIPKV+ LL++FF K L INPDEA+A+GAAV A+ILS +F + V +L+LR+VTPLS
Sbjct: 373 SRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLS 194
Query: 408 LGIATATYWENIMDVVIPRNTSIPVKNTKGYCTAIDN 444
LG+ IM+ +IPRNT IP + T N
Sbjct: 193 LGLEK---HGGIMETIIPRNTMIPTTMDHVFTTHFHN 92
>TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, partial
(24%)
Length = 476
Score = 130 bits (326), Expect = 9e-31
Identities = 79/158 (50%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Frame = +3
Query: 346 GGSSRIPKVQDLLLEFFKGKALFMNINPDEAIAYGAAVQAAILS-EDFKNVPNLVLRDVT 404
GGS+RIPKVQ LL ++F+GK +NPDEA+AYGAAVQ +ILS E + +++L DV
Sbjct: 3 GGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVA 182
Query: 405 PLSLGIATATYWENIMDVVIPRNTSIPVKNTKGYCTAID-NCGASIIVYEGERPRASDNN 463
PL+LGI T +M +IPRNT IP K ++ + T D SI V+EGER D
Sbjct: 183 PLTLGIETV---GGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 353
Query: 464 LLGLFTLSCL-PGPRGQP-LEVCFSIDENGILTVSGKD 499
LLG F LS + P PRG P +EV F +D NGIL V +D
Sbjct: 354 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAED 467
>AV769455
Length = 556
Score = 120 bits (302), Expect = 6e-28
Identities = 63/184 (34%), Positives = 105/184 (56%), Gaps = 1/184 (0%)
Frame = +1
Query: 56 IGNGAENQSATNPENTVFDAKRLIGRKYSDPIVQKDIMLWPFMVTSGVNDKPMITVKYKG 115
+G + + NP+N++ KRLIGR+++DP +Q+D+ PF VT G + P+I +Y G
Sbjct: 4 LGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLG 183
Query: 116 QEKQFCAEEISSAVLTKMREIAEAYLGSPVKNVVVTVPAYFNDSQRKATIDAGAIAGLNV 175
+ + F ++ +L+ ++EIA+ L + V + + +P YF D QR+A +DA IAGL+
Sbjct: 184 ETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHP 363
Query: 176 IRILNEPTAAAIAYGLDKRS-NYDGKRNILVFDLGGGTFDVSILTIKGDVFDVKATAGNT 234
+R+ +E TA A+AYG+ K + N+ D+G + V I K V A + +
Sbjct: 364 LRLFHETTATALAYGIYKTDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYDR 543
Query: 235 HLGG 238
LGG
Sbjct: 544 SLGG 555
>BP083571
Length = 423
Score = 117 bits (294), Expect = 5e-27
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 1 MARKYEGRAVGIDLGTTYSCVAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGA 60
MA KYEG A+GIDLGTTYSCVAVW + ++R EIIHN+QGNRTTPS VAFTD QRLIG+ A
Sbjct: 145 MATKYEGPAIGIDLGTTYSCVAVWQEQNDRAEIIHNEQGNRTTPSFVAFTDTQRLIGDAA 324
Query: 61 ENQSATNPENTV 72
+NQ+ATNP NTV
Sbjct: 325 KNQAATNPTNTV 360
>BP033771
Length = 513
Score = 107 bits (267), Expect = 7e-24
Identities = 58/140 (41%), Positives = 86/140 (61%)
Frame = -2
Query: 480 PLEVCFSIDENGILTVSGKDITTGILNEITITNEKERLSKFEIEKKIEEAEKYRVEDMKF 539
PL VCF +D NGIL VS ++ TTGI N IT+TN+ RLS +I + I+EAEK+R ED +
Sbjct: 512 PLNVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMY 333
Query: 540 LRKAKVISALDSCVYNIKSALNMKDVDLILSPQESEQINNAIIVAMNLLEMNKNNQHIEI 599
+K + ++ALD VY +++A+ D L PQ+ +I A+ A NLL + E
Sbjct: 332 EKKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLL---GTSDQTET 162
Query: 600 DVLEHHLKEMNSMLNMLLKI 619
+V E +L EM ++ ++KI
Sbjct: 161 EVFEDYLNEMEGIVEPIVKI 102
Score = 46.2 bits (108), Expect = 2e-05
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = -2
Query: 621 EDMKFLRKATVMSALDSCVKNITNALNTKDVNLIISPQESEKINNAIFGAMNLLDKNKNN 680
ED + +K M+ALD V + NA+ D + + PQ+ KI A+ A NLL +
Sbjct: 347 EDRMYEKKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLLG---TS 177
Query: 681 QQINIDVLEHHLKELTNMLKMLLKI 705
Q +V E +L E+ +++ ++KI
Sbjct: 176 DQTETEVFEDYLNEMEGIVEPIVKI 102
>CB827219
Length = 544
Score = 103 bits (257), Expect = 9e-23
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Frame = +3
Query: 199 GKRNILVFDLGGGTFDVSILTIKGDVFDVKATAGNTHLGGEDFDNRMVYYFVEE----FK 254
G R +L F++G G DV++ G V +KA AG+T +GGED M+++ + + FK
Sbjct: 30 GVRKLLYFNMGAGYCDVAVTVTAGGVSQIKALAGST-IGGEDLLQNMMHHLLPDCENIFK 206
Query: 255 KKNKVEISGNPKSLRRLRTACERAKRILSFTFVTTVEVDALFMGIDFSSSITRAKFEEIN 314
EI KS+ LR A A LS V+VD L G+ + I +FEE+N
Sbjct: 207 NHGVKEI----KSMGLLRVATLDAIHRLSSQKSVQVDVD-LGDGLKINKVIDCEEFEEVN 371
Query: 315 MDFFNECINIVDSCLRDSKIYKNDIDDVVLVGGSSRIPKVQDLLLEFFKGKALFMNI 371
+ F +C +++ CL+DSKI D++DV++VGG S IP+V++L+ KGK L+ I
Sbjct: 372 KNVFEKCESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKKLYEGI 542
>AV766006
Length = 408
Score = 97.1 bits (240), Expect = 9e-21
Identities = 58/129 (44%), Positives = 77/129 (58%), Gaps = 3/129 (2%)
Frame = -1
Query: 419 IMDVVIPRNTSIPVKNTKGYCTAIDN-CGASIIVYEGERPRASDNNLLGLFTLSCLPGP- 476
+M +I RNT IP + T+ + T D SI VYEGER DN LG F L+ +P
Sbjct: 399 VMSKIIERNTVIPTRKTQTFTTYQDKQTTVSIQVYEGERAMTKDNRQLGKFDLNGIPAAA 220
Query: 477 RGQP-LEVCFSIDENGILTVSGKDITTGILNEITITNEKERLSKFEIEKKIEEAEKYRVE 535
RG P +EV F +D NGIL VS +D + ITITN+K RLSK EIE+ ++EAE++
Sbjct: 219 RGTPQIEVTFEVDANGILAVSAEDKASSAKEAITITNDKGRLSKEEIERMVKEAEEFADA 40
Query: 536 DMKFLRKAK 544
D + RK +
Sbjct: 39 DAEVKRKVE 13
>AW163930
Length = 359
Score = 92.4 bits (228), Expect = 2e-19
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 361 FFKGKALFMNINPDEAIAYGAAVQAAILS-EDFKNVPNLVLRDVTPLSLGIATATYWENI 419
FF GK L +INPDEA+AYGAAVQAAILS E + V +L+L DVTPLSLG+ TA +
Sbjct: 40 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETA---GGV 210
Query: 420 MDVVIPRNTSIPVKNTKGYCTAIDN-CGASIIVYEG 454
M V+IPRNT+IP K + + T DN G I VYEG
Sbjct: 211 MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG 318
>TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein 70
(Fragment), partial (48%)
Length = 746
Score = 77.0 bits (188), Expect = 1e-14
Identities = 42/111 (37%), Positives = 66/111 (58%), Gaps = 2/111 (1%)
Frame = +1
Query: 449 IIVYEGERPRASDNNLLGLFTLSCL-PGPRGQP-LEVCFSIDENGILTVSGKDITTGILN 506
I VYEGE +A N LG F LS P P+G + VCF +D +GI+ VS +D++ +
Sbjct: 22 IKVYEGEGAKADKNFFLGKFELSGFSPAPKGDTEINVCFDVDADGIVEVSAEDMSLRLKK 201
Query: 507 EITITNEKERLSKFEIEKKIEEAEKYRVEDMKFLRKAKVISALDSCVYNIK 557
ITITN RLS+ E+ + + +A +Y+ ED + +K K ++L++ Y +
Sbjct: 202 TITITNRLGRLSQEEMSRMVRDAAQYKAEDEEVRKKVKAKNSLENYAYEAR 354
>AV409958
Length = 389
Score = 73.6 bits (179), Expect = 1e-13
Identities = 40/118 (33%), Positives = 70/118 (58%), Gaps = 4/118 (3%)
Frame = +2
Query: 245 MVYYFVEEFKKKNKVEISGNPKSLRRLRTACERAKRILSFTFVTTVEVDALFMGID---- 300
+V + +FK+ +++ + ++L+RL E+AK LS T + + + D
Sbjct: 5 IVDWLAADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKH 184
Query: 301 FSSSITRAKFEEINMDFFNECINIVDSCLRDSKIYKNDIDDVVLVGGSSRIPKVQDLL 358
+++TRAKFEE+ D + V++ LRD+K+ D+D+V+LVGGS+RIP VQ+L+
Sbjct: 185 IETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLSFKDLDEVILVGGSTRIPAVQELV 358
>AW428869
Length = 181
Score = 72.4 bits (176), Expect = 2e-13
Identities = 32/53 (60%), Positives = 43/53 (80%)
Frame = +1
Query: 203 ILVFDLGGGTFDVSILTIKGDVFDVKATAGNTHLGGEDFDNRMVYYFVEEFKK 255
ILVFDLGGGTFDVS+L + VF+V +T+G+THLGG+DFD R+V + +FK+
Sbjct: 22 ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAADFKR 180
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.136 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,806,580
Number of Sequences: 28460
Number of extensions: 112410
Number of successful extensions: 544
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of query: 713
length of database: 4,897,600
effective HSP length: 97
effective length of query: 616
effective length of database: 2,136,980
effective search space: 1316379680
effective search space used: 1316379680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC137996.5