BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137996.16 - phase: 0
(618 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%) 446 e-126
TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%) 417 e-118
TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa pro... 347 4e-96
BP044919 251 3e-67
BP040870 250 4e-67
BP041494 160 2e-58
TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment),... 210 5e-55
TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat... 197 4e-51
AW720237 187 4e-48
BP064075 186 1e-47
TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, p... 148 2e-36
BP033771 124 3e-29
AV769455 119 1e-27
AV766006 117 4e-27
BP083571 110 5e-25
AW163930 108 3e-24
TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein ... 100 7e-22
CB827219 97 6e-21
AV409958 87 1e-17
AV412686 73 2e-13
>TC14233 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (67%)
Length = 1570
Score = 446 bits (1148), Expect = e-126
Identities = 234/404 (57%), Positives = 298/404 (72%), Gaps = 2/404 (0%)
Frame = +1
Query: 215 VSLLTIKGDVFEVKATAGNTHLGGGDFDNRMLNYFVEEFKRKNNVDITKNPRALRRLRTA 274
VSLLTI+ +FEVKATAG+THLGG DFDNRM+N+FV+EFKRKN DI+ NPRALRRLRTA
Sbjct: 1 VSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTA 180
Query: 275 CEKAKRTLSFKLVTTIEIDYLCEGVDFSSSITRVKFEEINMDLFNECINTVESCLTDSKI 334
CE+AKRTLS TTIEID L EG+DF S ITR +FEE+NMDLF +C+ VE CL D+K+
Sbjct: 181 CERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKM 360
Query: 335 EKNGVDDIVLVGGSSRIPKVQELLSDFFNGKDLCKNINPDEAVASGAAVQASLLC-KDFK 393
+K V D+VLVGGS+RIPKVQ+LL DFFNGK+LCK+INPDEAVA GAAVQA++L + +
Sbjct: 361 DKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE 540
Query: 394 KVPNLVLRDVTPLSLGISGHGDIMAVVIPRNTTVPVKRPHECGTAKDNQSSARIKVYEGE 453
KV +L+L DVTPLSLG+ G +M V+IPRNTT+P K+ T DNQ I+V+EGE
Sbjct: 541 KVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGE 720
Query: 454 RARASDNNLLGFFNLSCVPGAPRGHP-FEVCFTIDENGILTVSAKEISSGNTNEITITND 512
R R DNNLLG F LS +P APRG P VCF ID NGIL VSA++ ++G N+ITITND
Sbjct: 721 RTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITND 900
Query: 513 KERLSADEIKRLIQEAEVYLAEDQKFLRKAKVMNSLDDCVYKLRNALKNKDIKLKCSSQK 572
K RLS D+I++++QEAE Y +ED++ +K + N+L++ Y +RN +K++ I K S
Sbjct: 901 KGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIAGKLDSAD 1080
Query: 573 VKKINHAITMATNLLDKNNQENDIDVLVDHLKELESMLEDLLVK 616
KI AI A L+ +NQ + D D +KELES+ ++ K
Sbjct: 1081KTKIEDAIEQAIQWLE-SNQLAEADEFEDKMKELESICNPIIAK 1209
>TC14234 homologue to UP|Q41027 (Q41027) PsHSC71.0, partial (66%)
Length = 1528
Score = 417 bits (1071), Expect(2) = e-118
Identities = 218/382 (57%), Positives = 278/382 (72%), Gaps = 2/382 (0%)
Frame = +3
Query: 237 GGGDFDNRMLNYFVEEFKRKNNVDITKNPRALRRLRTACEKAKRTLSFKLVTTIEIDYLC 296
GG DFDNRM+N+FV+EFKRKN DI+ NPRALRRLRTACE+AKRTLS TTIEID L
Sbjct: 48 GGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY 227
Query: 297 EGVDFSSSITRVKFEEINMDLFNECINTVESCLTDSKIEKNGVDDIVLVGGSSRIPKVQE 356
EG+DF S ITR +FEE+NMDLF +C+ VE CL D+K++K V D+VLVGGS+RIPKVQ+
Sbjct: 228 EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVHDVVLVGGSTRIPKVQQ 407
Query: 357 LLSDFFNGKDLCKNINPDEAVASGAAVQASLLC-KDFKKVPNLVLRDVTPLSLGISGHGD 415
LL DFFNGK+LCK+INPDEAVA GAAVQA++L + +KV +L+L DVTPLSLG+ G
Sbjct: 408 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 587
Query: 416 IMAVVIPRNTTVPVKRPHECGTAKDNQSSARIKVYEGERARASDNNLLGFFNLSCVPGAP 475
+M V+IPRNTT+P K+ T DNQ I+VYEGER R DNNLLG F LS +P AP
Sbjct: 588 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 767
Query: 476 RGHP-FEVCFTIDENGILTVSAKEISSGNTNEITITNDKERLSADEIKRLIQEAEVYLAE 534
RG P VCF ID NGIL VSA++ ++G N+ITITNDK RLS ++I++++QEAE Y +E
Sbjct: 768 RGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSE 947
Query: 535 DQKFLRKAKVMNSLDDCVYKLRNALKNKDIKLKCSSQKVKKINHAITMATNLLDKNNQEN 594
D++ +K + N+L++ Y +RN +K++ I K KKI AI A LD +NQ
Sbjct: 948 DEEHKKKVEAKNALENYAYNMRNTIKDEKIGGKLDPADKKKIEDAIEQAIQWLD-SNQLA 1124
Query: 595 DIDVLVDHLKELESMLEDLLVK 616
+ D D +KELES+ ++ K
Sbjct: 1125EADEFEDKMKELESICNPIIAK 1190
Score = 27.7 bits (60), Expect(2) = e-118
Identities = 11/13 (84%), Positives = 13/13 (99%)
Frame = +1
Query: 224 VFEVKATAGNTHL 236
+FEVKATAG+THL
Sbjct: 10 IFEVKATAGDTHL 48
>TC8353 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (74%)
Length = 1752
Score = 347 bits (889), Expect = 4e-96
Identities = 209/442 (47%), Positives = 272/442 (61%), Gaps = 6/442 (1%)
Frame = +3
Query: 137 AETYLKSPVQNAVVTVPAYFNDSQRKATMDAGAIAGLNVMRIINEPTAAAIAYGLDNKGN 196
AE YL V AV+TVPAYFND+ R+AT DAG IAGL+V RIINEPTAAA++YG+ NK
Sbjct: 9 AEAYLGKSVSKAVITVPAYFNDAHRQATKDAGRIAGLDVQRIINEPTAAALSYGMTNK-- 182
Query: 197 CDGERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGNTHLGGGDFDNRMLNYFVEEFKRK 256
E I VFDLGGGTFDVS+L I VFEVKAT G+T LGG DFDN +L++ V+EFKR
Sbjct: 183 ---EGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVDEFKRT 353
Query: 257 NNVDITKNPRALRRLRTACEKAKRTLSFKLVTTIEIDYLCEGVD----FSSSITRVKFEE 312
++D++K+ AL+RLR A EKAK LS T I + ++ + ++TR KFE
Sbjct: 354 ESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEA 533
Query: 313 INMDLFNECINTVESCLTDSKIEKNGVDDIVLVGGSSRIPKVQELLSDFFNGKDLCKNIN 372
+ L ++CL D+ I VD+++LVGG +R+PKVQE++S F GK K +N
Sbjct: 534 LVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQEVVSAIF-GKSPSKGVN 710
Query: 373 PDEAVASGAAVQASLLCKDFKKVPNLVLRDVTPLSLGISGHGDIMAVVIPRNTTVPVKRP 432
PDEAVA GAA+Q +L D K+ L+L DVTPLSLGI G I +I RNTT+P K+
Sbjct: 711 PDEAVAMGAAIQGGILRGDVKE---LLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKS 881
Query: 433 HECGTAKDNQSSARIKVYEGERARASDNNLLGFFNLSCVPGAPRGHP-FEVCFTIDENGI 491
TA DNQ+ IKV +GER ASDN LG F L +P APRG P EV F ID NGI
Sbjct: 882 QVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGLPQIEVTFDIDANGI 1061
Query: 492 LTVSAKEISSGNTNEITITNDKERLSADEIKRLIQEAEVYLAEDQKFLRKAKVMNSLDDC 551
+TVSAK+ S+G +ITI + +R +++ L +K R + + ++
Sbjct: 1062VTVSAKDKSTGKEQQITIXGHLVVSQTMKSRRWLKKLSCMLRRTKKG-RLSLISETVQIL 1238
Query: 552 VY-KLRNALKNKDIKLKCSSQK 572
Y LR N +I+ QK
Sbjct: 1239AYTALRRVWVNTEIRFPVKLQK 1304
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/78 (26%), Positives = 43/78 (54%)
Frame = +2
Query: 516 LSADEIKRLIQEAEVYLAEDQKFLRKAKVMNSLDDCVYKLRNALKNKDIKLKCSSQKVKK 575
LS DEI+++++EAE++ +DQ+ + NS D +Y + +L + + K S+ K+
Sbjct: 1133 LSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTSIYSIEKSL--GEYRDKIPSEVAKE 1306
Query: 576 INHAITMATNLLDKNNQE 593
I A++ + +N +
Sbjct: 1307 IEDAVSELRTAMSGDNAD 1360
>BP044919
Length = 519
Score = 251 bits (640), Expect = 3e-67
Identities = 121/164 (73%), Positives = 142/164 (85%)
Frame = +3
Query: 80 GRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYKGQEKNLCAEEISSIILTNMKKIAET 139
GRK+SD V+Q D+ LWPFKVI+G +DKPMI VK+KG+EK L EEISS++L+ MK+IAE
Sbjct: 27 GRKYSDSVIQEDVKLWPFKVIAGTDDKPMIVVKHKGEEKKLVPEEISSMVLSKMKEIAEA 206
Query: 140 YLKSPVQNAVVTVPAYFNDSQRKATMDAGAIAGLNVMRIINEPTAAAIAYGLDNKGNCDG 199
+L+S V+NAVVTVPAYFND+QRKAT DAG IAGLNVMRIINEPTAAA+AYGL + N G
Sbjct: 207 FLESSVKNAVVTVPAYFNDAQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRANLVG 386
Query: 200 ERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGNTHLGGGDFDN 243
ERN+F+FDLGGGTFDVSLLTIK D FEVKAT+G+THLG DFDN
Sbjct: 387 ERNVFIFDLGGGTFDVSLLTIKDDNFEVKATSGDTHLGXKDFDN 518
>BP040870
Length = 505
Score = 250 bits (639), Expect = 4e-67
Identities = 122/167 (73%), Positives = 143/167 (85%)
Frame = +2
Query: 111 VKYKGQEKNLCAEEISSIILTNMKKIAETYLKSPVQNAVVTVPAYFNDSQRKATMDAGAI 170
V YKG+EK AEEISS++L MK+IAE YL + ++NAVVTVPAYFNDSQR+AT DAG I
Sbjct: 5 VNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVI 184
Query: 171 AGLNVMRIINEPTAAAIAYGLDNKGNCDGERNIFVFDLGGGTFDVSLLTIKGDVFEVKAT 230
+GLNVMRIINEPTAAAIAYGLD K GE+N+ +FDLGGGTFDVSLLTI+ +FEVK+T
Sbjct: 185 SGLNVMRIINEPTAAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKST 364
Query: 231 AGNTHLGGGDFDNRMLNYFVEEFKRKNNVDITKNPRALRRLRTACEK 277
AG+THLGG DFDNRM+N+FV+EFKRKN DI+ N RALRRLRTACE+
Sbjct: 365 AGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACER 505
>BP041494
Length = 572
Score = 160 bits (405), Expect(2) = 2e-58
Identities = 80/110 (72%), Positives = 91/110 (82%)
Frame = +3
Query: 74 DAKRLIGRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYKGQEKNLCAEEISSIILTNM 133
DAKRLIGRKFSD V++D+ LWPFKVISG D+PMI V YK +EK AEEISS++L M
Sbjct: 243 DAKRLIGRKFSDDSVESDMKLWPFKVISGPVDRPMIVVNYKNEEKQFTAEEISSMVLIKM 422
Query: 134 KKIAETYLKSPVQNAVVTVPAYFNDSQRKATMDAGAIAGLNVMRIINEPT 183
++IAE YL S V+N VVTVPAYFNDSQR+AT DAG IAGLNVMRIINEPT
Sbjct: 423 REIAEAYLGSTVKNVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT 572
Score = 83.2 bits (204), Expect(2) = 2e-58
Identities = 39/55 (70%), Positives = 48/55 (86%)
Frame = +1
Query: 9 AVGIDLGTTYSCVGVWLEEKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAAKDQ 63
A+GIDLGTTYSCVGVW + +RVEII ND+GN+ TPS+VAFTD +RL+G AAK+Q
Sbjct: 85 AIGIDLGTTYSCVGVW--QNDRVEIIPNDQGNRTTPSYVAFTDFERLIGDAAKNQ 243
>TC9795 homologue to UP|Q9ATB8 (Q9ATB8) BiP-isoform D (Fragment), partial
(63%)
Length = 981
Score = 210 bits (535), Expect = 5e-55
Identities = 109/178 (61%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Frame = +1
Query: 7 GNAVGIDLGTTYSCVGVWLEEKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAAKDQAAI 66
G +GIDLGTTYSCVGV+ VEII ND+GN+ITPS+VAF D +RL+G AAK+Q A+
Sbjct: 145 GTVIGIDLGTTYSCVGVY--RNGHVEIIANDQGNRITPSWVAFNDGERLIGEAAKNQFAV 318
Query: 67 NPENTVFDAKRLIGRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYK-GQEKNLCAEEI 125
NPE T+FD KRLIGRKF D VQ D+ L P+K+++ + KP I VK K G+ K EE+
Sbjct: 319 NPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVN-KDGKPYIQVKIKDGETKVFSPEEV 495
Query: 126 SSIILTNMKKIAETYLKSPVQNAVVTVPAYFNDSQRKATMDAGAIAGLNVMRIINEPT 183
S++ILT MK+ AE +L + +AVVTVPAYFND+QR+AT DAG IAGLNV RIINEPT
Sbjct: 496 SAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPT 669
Score = 128 bits (321), Expect = 3e-30
Identities = 66/111 (59%), Positives = 82/111 (73%)
Frame = +2
Query: 173 LNVMRIINEPTAAAIAYGLDNKGNCDGERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAG 232
L ++ + P AAAIAYGLD KG GE+NI VFDLGGGTFDVS+LTI VFEV AT G
Sbjct: 638 LMLLELSMNPPAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLATNG 808
Query: 233 NTHLGGGDFDNRMLNYFVEEFKRKNNVDITKNPRALRRLRTACEKAKRTLS 283
+THLGG DFD R++ YF++ K+K+ DI+K+ RAL +LR E+AKR LS
Sbjct: 809 DTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALS 961
>TC18168 homologue to UP|Q8GSN4 (Q8GSN4) Non-cell-autonomous heat shock
cognate protein 70, partial (23%)
Length = 508
Score = 197 bits (501), Expect = 4e-51
Identities = 99/152 (65%), Positives = 122/152 (80%)
Frame = +2
Query: 1 MARIYDGNAVGIDLGTTYSCVGVWLEEKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAA 60
MA +G A+GIDLGTTYSCVGVW + +RVEII ND+GN+ TPS+VAFTD +RL+G AA
Sbjct: 59 MAGKGEGPAIGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAA 232
Query: 61 KDQAAINPENTVFDAKRLIGRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYKGQEKNL 120
K+Q A+NP NTVFDAKRLIGR+ SD VQ+D+ LWPFKV SG +KPMI V YKG++K
Sbjct: 233 KNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVNSGPAEKPMIQVSYKGEDKQF 412
Query: 121 CAEEISSIILTNMKKIAETYLKSPVQNAVVTV 152
AEEISS++L M++IAE YL S ++NAVVTV
Sbjct: 413 AAEEISSMVLMKMREIAEAYLGSTIKNAVVTV 508
>AW720237
Length = 459
Score = 187 bits (475), Expect = 4e-48
Identities = 89/141 (63%), Positives = 112/141 (79%)
Frame = +3
Query: 9 AVGIDLGTTYSCVGVWLEEKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAAKDQAAINP 68
A+GIDLGTTYSCVGVW+ + RVEII ND+GN+ TPS+V FT+ +RL+G AAK+Q A NP
Sbjct: 42 AIGIDLGTTYSCVGVWMND--RVEIIANDQGNRTTPSYVGFTESERLIGDAAKNQVARNP 215
Query: 69 ENTVFDAKRLIGRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYKGQEKNLCAEEISSI 128
NTVFDAKRLIGRKF DP+VQ DI LWPFKV +G + KP+I VKYKG+ K AE++SS+
Sbjct: 216 INTVFDAKRLIGRKFDDPIVQKDIKLWPFKVEAGPDGKPLIAVKYKGETKKFHAEQVSSM 395
Query: 129 ILTNMKKIAETYLKSPVQNAV 149
+LT MK+ AE YL +++ V
Sbjct: 396 VLTKMKETAEAYLNKTIKDIV 458
>BP064075
Length = 554
Score = 186 bits (472), Expect = 1e-47
Identities = 92/155 (59%), Positives = 116/155 (74%), Gaps = 1/155 (0%)
Frame = -2
Query: 289 TIEIDYLCEGVDFSSSITRVKFEEINMDLFNECINTVESCLTDSKIEKNGVDDIVLVGGS 348
TIE+D+L +G+DF SSITR KFEE+N D F +C+ VE C+ DSK++K+ + D+VLVGGS
Sbjct: 553 TIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGS 374
Query: 349 SRIPKVQELLSDFFNGKDLCKNINPDEAVASGAAVQASLLCKDF-KKVPNLVLRDVTPLS 407
SRIPKV++LL DFF KDLC INPDEAVA GAAV AS+L +F +KV +L+LR+VTPLS
Sbjct: 373 SRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLS 194
Query: 408 LGISGHGDIMAVVIPRNTTVPVKRPHECGTAKDNQ 442
LG+ HG IM +IPRNT +P H T NQ
Sbjct: 193 LGLEKHGGIMETIIPRNTMIPTTMDHVFTTHFHNQ 89
>TC18256 homologue to UP|Q9M4E8 (Q9M4E8) Heat shock protein 70, partial
(24%)
Length = 476
Score = 148 bits (374), Expect = 2e-36
Identities = 79/155 (50%), Positives = 107/155 (68%), Gaps = 2/155 (1%)
Frame = +3
Query: 346 GGSSRIPKVQELLSDFFNGKDLCKNINPDEAVASGAAVQASLLCKDF-KKVPNLVLRDVT 404
GGS+RIPKVQ+LL D+F GK+ K +NPDEAVA GAAVQ S+L + ++ +++L DV
Sbjct: 3 GGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVA 182
Query: 405 PLSLGISGHGDIMAVVIPRNTTVPVKRPHECGTAKDNQSSARIKVYEGERARASDNNLLG 464
PL+LGI G +M +IPRNT +P K+ T +D Q++ I+V+EGER+ D LLG
Sbjct: 183 PLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLG 362
Query: 465 FFNLSCVPGAPRGHP-FEVCFTIDENGILTVSAKE 498
F+LS +P APRG P EV F +D NGIL V A++
Sbjct: 363 KFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAED 467
>BP033771
Length = 513
Score = 124 bits (312), Expect = 3e-29
Identities = 66/136 (48%), Positives = 93/136 (67%)
Frame = -2
Query: 479 PFEVCFTIDENGILTVSAKEISSGNTNEITITNDKERLSADEIKRLIQEAEVYLAEDQKF 538
P VCF +D NGIL VSA+E ++G N IT+TND RLS+++I RLIQEAE + AED+ +
Sbjct: 512 PLNVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMY 333
Query: 539 LRKAKVMNSLDDCVYKLRNALKNKDIKLKCSSQKVKKINHAITMATNLLDKNNQENDIDV 598
+K + MN+LDD VYKLRNA+K+ D K Q KI A+T A NLL ++Q + +V
Sbjct: 332 EKKVEAMNALDDYVYKLRNAIKDIDRSSKLRPQDKSKIRVAVTKARNLLGTSDQ-TETEV 156
Query: 599 LVDHLKELESMLEDLL 614
D+L E+E ++E ++
Sbjct: 155 FEDYLNEMEGIVEPIV 108
>AV769455
Length = 556
Score = 119 bits (298), Expect = 1e-27
Identities = 62/184 (33%), Positives = 105/184 (56%), Gaps = 1/184 (0%)
Frame = +1
Query: 56 VGGAAKDQAAINPENTVFDAKRLIGRKFSDPVVQNDIMLWPFKVISGVNDKPMITVKYKG 115
+G A +NP+N++ KRLIGR+F+DP +Q D+ PF V G + P+I +Y G
Sbjct: 4 LGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLG 183
Query: 116 QEKNLCAEEISSIILTNMKKIAETYLKSPVQNAVVTVPAYFNDSQRKATMDAGAIAGLNV 175
+ + ++ ++L+N+K+IA+ L + V + + +P YF D QR+A +DA IAGL+
Sbjct: 184 ETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHP 363
Query: 176 MRIINEPTAAAIAYGLDNKGNCDGE-RNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGNT 234
+R+ +E TA A+AYG+ + + N+ D+G + V + K +V A + +
Sbjct: 364 LRLFHETTATALAYGIYKTDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYDR 543
Query: 235 HLGG 238
LGG
Sbjct: 544 SLGG 555
>AV766006
Length = 408
Score = 117 bits (294), Expect = 4e-27
Identities = 62/135 (45%), Positives = 87/135 (63%), Gaps = 1/135 (0%)
Frame = -1
Query: 414 GDIMAVVIPRNTTVPVKRPHECGTAKDNQSSARIKVYEGERARASDNNLLGFFNLSCVPG 473
G +M+ +I RNT +P ++ T +D Q++ I+VYEGERA DN LG F+L+ +P
Sbjct: 405 GGVMSKIIERNTVIPTRKTQTFTTYQDKQTTVSIQVYEGERAMTKDNRQLGKFDLNGIPA 226
Query: 474 APRGHP-FEVCFTIDENGILTVSAKEISSGNTNEITITNDKERLSADEIKRLIQEAEVYL 532
A RG P EV F +D NGIL VSA++ +S ITITNDK RLS +EI+R+++EAE +
Sbjct: 225 AARGTPQIEVTFEVDANGILAVSAEDKASSAKEAITITNDKGRLSKEEIERMVKEAEEFA 46
Query: 533 AEDQKFLRKAKVMNS 547
D + RK + NS
Sbjct: 45 DADAEVKRKVEGKNS 1
>BP083571
Length = 423
Score = 110 bits (276), Expect = 5e-25
Identities = 51/72 (70%), Positives = 60/72 (82%)
Frame = +1
Query: 1 MARIYDGNAVGIDLGTTYSCVGVWLEEKNRVEIIHNDEGNKITPSFVAFTDDQRLVGGAA 60
MA Y+G A+GIDLGTTYSCV VW E+ +R EIIHN++GN+ TPSFVAFTD QRL+G AA
Sbjct: 145 MATKYEGPAIGIDLGTTYSCVAVWQEQNDRAEIIHNEQGNRTTPSFVAFTDTQRLIGDAA 324
Query: 61 KDQAAINPENTV 72
K+QAA NP NTV
Sbjct: 325 KNQAATNPTNTV 360
>AW163930
Length = 359
Score = 108 bits (269), Expect = 3e-24
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Frame = +1
Query: 358 LSDFFNGKDLCKNINPDEAVASGAAVQASLLCKDF-KKVPNLVLRDVTPLSLGISGHGDI 416
++ FFNGK+LCK+INPDEAVA GAAVQA++L + +KV +L+L DVTPLSLG+ G +
Sbjct: 31 IAGFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGV 210
Query: 417 MAVVIPRNTTVPVKRPHECGTAKDNQSSARIKVYEG 452
M V+IPRNTT+P K+ T DNQ I+VYEG
Sbjct: 211 MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG 318
>TC12812 weakly similar to UP|Q8RVV9 (Q8RVV9) Heat shock protein 70
(Fragment), partial (48%)
Length = 746
Score = 100 bits (249), Expect = 7e-22
Identities = 60/152 (39%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = +1
Query: 440 DNQSSARIKVYEGERARASDNNLLGFFNLSCVPGAPRGHP-FEVCFTIDENGILTVSAKE 498
DNQ+S IKVYEGE A+A N LG F LS AP+G VCF +D +GI+ VSA++
Sbjct: 1 DNQTSVWIKVYEGEGAKADKNFFLGKFELSGFSPAPKGDTEINVCFDVDADGIVEVSAED 180
Query: 499 ISSGNTNEITITNDKERLSADEIKRLIQEAEVYLAEDQKFLRKAKVMNSLDDCVYKLRNA 558
+S ITITN RLS +E+ R++++A Y AED++ +K K NSL++ Y+ R+
Sbjct: 181 MSLRLKKTITITNRLGRLSQEEMSRMVRDAAQYKAEDEEVRKKVKAKNSLENYAYEARD- 357
Query: 559 LKNKDIKLKCSSQKVKKINHAITMATNLLDKN 590
+VKK+ + LD+N
Sbjct: 358 -------------RVKKLEKMVEEVIEWLDRN 414
>CB827219
Length = 544
Score = 97.4 bits (241), Expect = 6e-21
Identities = 56/173 (32%), Positives = 98/173 (56%)
Frame = +3
Query: 199 GERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGNTHLGGGDFDNRMLNYFVEEFKRKNN 258
G R + F++G G DV++ G V ++KA AG+T +GG D M+++ + + +
Sbjct: 30 GVRKLLYFNMGAGYCDVAVTVTAGGVSQIKALAGST-IGGEDLLQNMMHHLLPDCENIFK 206
Query: 259 VDITKNPRALRRLRTACEKAKRTLSFKLVTTIEIDYLCEGVDFSSSITRVKFEEINMDLF 318
K +++ LR A A LS + +++D L +G+ + I +FEE+N ++F
Sbjct: 207 NHGVKEIKSMGLLRVATLDAIHRLSSQKSVQVDVD-LGDGLKINKVIDCEEFEEVNKNVF 383
Query: 319 NECINTVESCLTDSKIEKNGVDDIVLVGGSSRIPKVQELLSDFFNGKDLCKNI 371
+C + + CL DSKIE V+D+++VGG S IP+V+ L+++ GK L + I
Sbjct: 384 EKCESLIIQCLQDSKIEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKKLYEGI 542
>AV409958
Length = 389
Score = 86.7 bits (213), Expect = 1e-17
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Frame = +2
Query: 245 MLNYFVEEFKRKNNVDITKNPRALRRLRTACEKAKRTLSFKLVTTIEIDYLCEGVD---- 300
++++ +FKR +D+ K+ +AL+RL EKAK LS T I + ++ D
Sbjct: 5 IVDWLAADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKH 184
Query: 301 FSSSITRVKFEEINMDLFNECINTVESCLTDSKIEKNGVDDIVLVGGSSRIPKVQELLSD 360
+++TR KFEE+ DL + VE+ L D+K+ +D+++LVGGS+RIP VQEL+
Sbjct: 185 IETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKK 364
Query: 361 FFNGKD 366
GKD
Sbjct: 365 -MTGKD 379
>AV412686
Length = 166
Score = 72.8 bits (177), Expect = 2e-13
Identities = 33/52 (63%), Positives = 44/52 (84%)
Frame = +2
Query: 232 GNTHLGGGDFDNRMLNYFVEEFKRKNNVDITKNPRALRRLRTACEKAKRTLS 283
G+T+LGG DFDN ++N+ V+ F+RK+N DIT+N ++LRRLR ACEKAKR LS
Sbjct: 2 GDTYLGGVDFDNNLVNFLVDFFQRKHNKDITENVKSLRRLRLACEKAKRILS 157
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.135 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,670,306
Number of Sequences: 28460
Number of extensions: 104226
Number of successful extensions: 488
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of query: 618
length of database: 4,897,600
effective HSP length: 96
effective length of query: 522
effective length of database: 2,165,440
effective search space: 1130359680
effective search space used: 1130359680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC137996.16