TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137823.12 + phase: 0 /pseudo
         (59 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC7870 homologue to UP|CHS4_MEDSA (P30075) Chalcone synthase 4  ...   115  2e-27
TC7867 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase  (N...   114  4e-27
TC20150 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase  (...   113  7e-27
TC7873 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase  (N...   113  7e-27
TC7872 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase  (N...   113  7e-27
BE122498                                                              110  6e-26
AV426728                                                              104  3e-24
TC14313 similar to UP|O80407 (O80407) Chalcone synthase  , parti...    93  1e-20
TC10818 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like pro...    37  0.001
TC17013 similar to UP|O24625 (O24625) Anther-specific protein, p...    35  0.003
TC12226                                                                24  6.8
BU494131                                                               23  8.9

>TC7870 homologue to UP|CHS4_MEDSA (P30075) Chalcone synthase 4
           (Naringenin-chalcone synthase 4) (CHS12-1) , complete
          Length = 1461

 Score =  115 bits (288), Expect = 2e-27
 Identities = 54/59 (91%), Positives = 58/59 (97%)
 Frame = +1

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATI AIGTANPANCV+QSTYPDFYF++TNSEHKTELKEKFQRM
Sbjct: 118 MVSVAEIRKAQRAEGPATIFAIGTANPANCVDQSTYPDFYFRVTNSEHKTELKEKFQRM 294


>TC7867 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
           (Naringenin-chalcone synthase) , complete
          Length = 1387

 Score =  114 bits (285), Expect = 4e-27
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +3

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATILAIGTANP NCV+QSTYPDFYFKITNSEH TELKEKFQRM
Sbjct: 54  MVSVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDFYFKITNSEHMTELKEKFQRM 230


>TC20150 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
           (Naringenin-chalcone synthase) , partial (24%)
          Length = 419

 Score =  113 bits (283), Expect = 7e-27
 Identities = 53/59 (89%), Positives = 57/59 (95%)
 Frame = +3

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATI AIGTANP NCV+QSTYPDFYF++TNSEHKTELKEKFQRM
Sbjct: 141 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRM 317


>TC7873 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
           (Naringenin-chalcone synthase) , partial (35%)
          Length = 534

 Score =  113 bits (283), Expect = 7e-27
 Identities = 53/59 (89%), Positives = 57/59 (95%)
 Frame = +3

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATI AIGTANP NCV+QSTYPDFYF++TNSEHKTELKEKFQRM
Sbjct: 123 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRM 299


>TC7872 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
           (Naringenin-chalcone synthase) , partial (33%)
          Length = 476

 Score =  113 bits (283), Expect = 7e-27
 Identities = 53/59 (89%), Positives = 57/59 (95%)
 Frame = +1

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATI AIGTANP NCV+QSTYPDFYF++TNSEHKTELKEKFQRM
Sbjct: 88  MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRM 264


>BE122498 
          Length = 293

 Score =  110 bits (275), Expect = 6e-26
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +1

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MVSV+EIRKAQRAEGPATI AIGTANP NCV+QSTYPDFYF++TNSEHKTELKEK QRM
Sbjct: 97  MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKCQRM 273


>AV426728 
          Length = 230

 Score =  104 bits (260), Expect = 3e-24
 Identities = 48/55 (87%), Positives = 54/55 (97%)
 Frame = +1

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEK 55
           MVSV+EIRKAQRAEGPATI AIGTANP+NCV+QSTYPDFYF++TNS+HKTELKEK
Sbjct: 64  MVSVAEIRKAQRAEGPATIFAIGTANPSNCVDQSTYPDFYFRVTNSKHKTELKEK 228


>TC14313 similar to UP|O80407 (O80407) Chalcone synthase  , partial (98%)
          Length = 1567

 Score = 92.8 bits (229), Expect = 1e-20
 Identities = 42/59 (71%), Positives = 51/59 (86%)
 Frame = +2

Query: 1   MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           MV+V EIR AQR+ GPATILA GTA P++CV Q+ YPD+YF+ITNSEH T+LKEKF+RM
Sbjct: 74  MVTVEEIRNAQRSSGPATILAFGTATPSHCVMQADYPDYYFRITNSEHMTDLKEKFKRM 250


>TC10818 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like protein,
           partial (44%)
          Length = 589

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 22/49 (44%), Positives = 28/49 (56%)
 Frame = +3

Query: 11  QRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           Q   G ATILA+G A P   V Q    D YF+ TN ++  ELK+K  R+
Sbjct: 69  QANPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDN-PELKQKLTRL 212


>TC17013 similar to UP|O24625 (O24625) Anther-specific protein, partial
           (42%)
          Length = 617

 Score = 35.0 bits (79), Expect = 0.003
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +2

Query: 5   SEIRKAQRAE-----GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
           S +++A RA+     G ATILAIG A PA  + Q    + Y + T  E  + +KEK +R+
Sbjct: 80  SSMQRAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCE-DSYVKEKLERL 256


>TC12226 
          Length = 541

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 33  QSTYPDFYFKITN 45
           QS YPD+YF I++
Sbjct: 219 QSRYPDYYFSISH 257


>BU494131 
          Length = 381

 Score = 23.5 bits (49), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 32  EQSTYPDFYFKITNSEHKTE 51
           E +T P F+F + NSE K +
Sbjct: 128 ESTTIPSFFFLLGNSEMKNK 69


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.314    0.127    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 759,565
Number of Sequences: 28460
Number of extensions: 5618
Number of successful extensions: 35
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of query: 59
length of database: 4,897,600
effective HSP length: 35
effective length of query: 24
effective length of database: 3,901,500
effective search space: 93636000
effective search space used: 93636000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)