TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.5 + phase: 0 
         (58 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14546 similar to UP|Q9XGV6 (Q9XGV6) Bacterial-induced peroxida...    28  0.28
TC7980 similar to UP|Q9SJM6 (Q9SJM6) At2g36320 protein (Zinc fin...    28  0.47
TC7979 similar to UP|Q9SJM6 (Q9SJM6) At2g36320 protein (Zinc fin...    28  0.47
TC14152 weakly similar to UP|AB18_PEA (Q06930) ABA-responsive pr...    25  3.1
TC14792 similar to UP|O73620 (O73620) Nuclear protein SDK2, part...    25  3.1
BP053883                                                               25  3.1
TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), par...    25  3.1
AU252132                                                               25  4.0
BP041269                                                               24  6.8
BI420126                                                               23  8.9

>TC14546 similar to UP|Q9XGV6 (Q9XGV6) Bacterial-induced peroxidase
          precursor  , partial (66%)
          Length = 738

 Score = 28.5 bits (62), Expect = 0.28
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 2  ARRERQRKSKKQKWIWGSLTTV 23
          ARRER+ +S  +KW WG++  V
Sbjct: 80 ARRERRMESAAKKWEWGAIWIV 15


>TC7980 similar to UP|Q9SJM6 (Q9SJM6) At2g36320 protein (Zinc finger-like
           protein), partial (36%)
          Length = 670

 Score = 27.7 bits (60), Expect = 0.47
 Identities = 12/37 (32%), Positives = 19/37 (50%)
 Frame = -3

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLP 37
           ++RR R  + + + WIW +L  V + G     WS  P
Sbjct: 608 VSRRRRSWRERFRLWIWSTLLAVPSNGCLCSIWSRDP 498


>TC7979 similar to UP|Q9SJM6 (Q9SJM6) At2g36320 protein (Zinc finger-like
           protein), partial (73%)
          Length = 1262

 Score = 27.7 bits (60), Expect = 0.47
 Identities = 12/37 (32%), Positives = 19/37 (50%)
 Frame = -1

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLP 37
           ++RR R  + + + WIW +L  V + G     WS  P
Sbjct: 422 VSRRRRSWRERFRLWIWSTLLAVPSNGCLCSIWSRDP 312


>TC14152 weakly similar to UP|AB18_PEA (Q06930) ABA-responsive protein
           ABR18, partial (92%)
          Length = 827

 Score = 25.0 bits (53), Expect = 3.1
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -2

Query: 4   RERQRKSKKQKWIW 17
           +++QRK +K++W+W
Sbjct: 688 QQKQRKKRKREWLW 647


>TC14792 similar to UP|O73620 (O73620) Nuclear protein SDK2, partial (5%)
          Length = 492

 Score = 25.0 bits (53), Expect = 3.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 10  SKKQKWIWGSLTTVIALGTAA 30
           S  + W WGS +T +A G+ A
Sbjct: 165 SSTESWSWGSTSTGLAAGSTA 103


>BP053883 
          Length = 230

 Score = 25.0 bits (53), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (62%)
 Frame = +1

Query: 3   RRERQRKSKKQKWIWGSLTTVI 24
           RRE ++ +  Q+W W SL  +I
Sbjct: 148 RRENRKAASIQQWFW*SLVRII 213


>TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), partial (37%)
          Length = 1779

 Score = 25.0 bits (53), Expect = 3.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 10  SKKQKWIWGSLTTVIALGTAA 30
           S  + W WGS +T +A G+ A
Sbjct: 150 SSTESWSWGSTSTGLAAGSTA 88


>AU252132 
          Length = 350

 Score = 24.6 bits (52), Expect = 4.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 20  LTTVIALGTAAVAWSYLPAGGESY 43
           ++  +A+ T  V+W YLPA  +SY
Sbjct: 184 ISAPMAVMTKRVSWEYLPATFKSY 255


>BP041269 
          Length = 417

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 10  SKKQKWIWGSLTTVIALGTAAVAWSYLPA 38
           SK+  W WG+   ++ +     AW  LPA
Sbjct: 409 SKELVWGWGTCLELLVVHQ*TQAWDPLPA 323


>BI420126 
          Length = 441

 Score = 23.5 bits (49), Expect = 8.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 16  IWGSLTTVIALGTAAVAWSYLPAGGESYSAEDHPVPKHDD 55
           I  +L T +AL TAA+++  +        +  HPVPKH++
Sbjct: 74  ILNNLWTWLALLTAALSFWRI-------RSSSHPVPKHNN 172


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.313    0.126    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,100,957
Number of Sequences: 28460
Number of extensions: 10634
Number of successful extensions: 57
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of query: 58
length of database: 4,897,600
effective HSP length: 34
effective length of query: 24
effective length of database: 3,929,960
effective search space: 94319040
effective search space used: 94319040
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 49 (23.5 bits)