TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.1 - phase: 0 
         (284 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC12160 weakly similar to UP|Q9SPV4 (Q9SPV4) S-adenosyl-L-methio...   242  6e-65
BP069360                                                               83  9e-27
TC17520 similar to GB|AAO63388.1|28950929|BT005324 At5g19850 {Ar...    28  1.8
AV776293                                                               28  2.3
TC19042 similar to UP|AAR34783 (AAR34783) ParA family protein, p...    26  8.8
BP054724                                                               26  8.8
BP057694                                                               26  8.8

>TC12160 weakly similar to UP|Q9SPV4 (Q9SPV4)
           S-adenosyl-L-methionine:salicylic acid carboxyl
           methyltransferase, partial (32%)
          Length = 520

 Score =  242 bits (617), Expect = 6e-65
 Identities = 118/171 (69%), Positives = 140/171 (81%)
 Frame = +1

Query: 3   EVGKRETRMKVEQVLHMNGGIGETSYSNNSLLQKKVISLTKEMRDEAIKNLYCKTFPKRL 62
           EV KRETRM V QVLHMNGG G+TSY+ NSL Q+K ISLTK MR+EA+ +LY K  P+ L
Sbjct: 10  EVEKRETRMDVAQVLHMNGGSGDTSYAKNSLPQQKAISLTKAMREEALTSLYLKKAPRIL 189

Query: 63  GIADLGCSSGPNTLLVISEVIKLVDKLCQEHNHESPEYQVFMNDLQGNDFNNIFRLLDRF 122
            IADLGCSSGPNTL+V+SE++K V+ LC++  H+SPEYQ FMNDL  NDFNNIF+ LD +
Sbjct: 190 SIADLGCSSGPNTLMVLSELVKTVENLCRKMKHKSPEYQFFMNDLPVNDFNNIFKSLDSY 369

Query: 123 TEKLNDEVEDGIGGPIFFYGAPGSFYGRIFPTKTMHFIHSSYSLQWLSQVP 173
            EKL+DE+   I GP FF G PGSFYGRIFPTKT+HF+HSSYSLQWLS+VP
Sbjct: 370 KEKLSDELGAEI-GPCFFTGVPGSFYGRIFPTKTLHFVHSSYSLQWLSRVP 519


>BP069360 
          Length = 430

 Score = 82.8 bits (203), Expect(2) = 9e-27
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +3

Query: 15 QVLHMNGGIGETSYSNNSLLQKKVISLTKEMRDEAIKNLYCKTFPKRLGIADLGCSSGPN 74
          +VLHMN G+ ETSY  NS LQ K+I +T     +A+  + C + P R+GIADLGCSSGPN
Sbjct: 12 KVLHMNKGVRETSYVMNSTLQSKIIDVTNPATKKAMVEILCSSRPVRMGIADLGCSSGPN 191

Query: 75 TLLVISEVIKLV 86
          TL VI+E++ +V
Sbjct: 192TLRVITEIVDVV 227



 Score = 53.5 bits (127), Expect(2) = 9e-27
 Identities = 26/56 (46%), Positives = 31/56 (54%)
 Frame = +1

Query: 98  PEYQVFMNDLQGNDFNNIFRLLDRFTEKLNDEVEDGIGGPIFFYGAPGSFYGRIFP 153
           PE  V +NDL  NDFN +F  L  F +    E  +G G   F    PGSFYGR+FP
Sbjct: 262 PELVVHLNDLFTNDFNTVFDSLPSFYKTQRQEKGNGFGSTCFVSPVPGSFYGRLFP 429


>TC17520 similar to GB|AAO63388.1|28950929|BT005324 At5g19850 {Arabidopsis
           thaliana;}, partial (43%)
          Length = 688

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 15/37 (40%), Positives = 19/37 (50%)
 Frame = -2

Query: 59  PKRLGIADLGCSSGPNTLLVISEVIKLVDKLCQEHNH 95
           P RLG  +LG      T  V+ E +  VD  CQ H+H
Sbjct: 159 PIRLGKMELGVRRRCRTRTVVGEKMSSVDG*CQCHDH 49


>AV776293 
          Length = 388

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 43  KEMRDEAIKNLYCKTFPKRLGIAD 66
           + +RD A+KNLYC  F +R  I++
Sbjct: 308 RALRDHALKNLYCFLFCRRNNISN 379


>TC19042 similar to UP|AAR34783 (AAR34783) ParA family protein, partial (6%)
          Length = 516

 Score = 25.8 bits (55), Expect = 8.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 154 TKTMHFIHSSYSLQWLSQVPK 174
           T++ H+IHS+ + +W    PK
Sbjct: 192 TRSCHYIHSTKNQRWYGMAPK 130


>BP054724 
          Length = 603

 Score = 25.8 bits (55), Expect = 8.8
 Identities = 17/55 (30%), Positives = 26/55 (46%), Gaps = 12/55 (21%)
 Frame = +1

Query: 62  LGIADLGCSSGP----------NTLLVISEVIKLVDKLCQEHN--HESPEYQVFM 104
           LG+  +GC +GP            +  +S+V KL D   Q HN   +S  Y+ F+
Sbjct: 337 LGLVSMGCETGPELKEKQGRTSKQVFFLSDVDKL*DLRRQNHNIPQDSVMYKPFV 501


>BP057694 
          Length = 374

 Score = 25.8 bits (55), Expect = 8.8
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 150 RIFPTKTMHFIHSSYS-LQWLSQV 172
           ++FP KT+H +HS+   +QW  Q+
Sbjct: 170 KLFPRKTLHGLHSTEEVIQW*MQI 99


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.319    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,370,579
Number of Sequences: 28460
Number of extensions: 57288
Number of successful extensions: 240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of query: 284
length of database: 4,897,600
effective HSP length: 89
effective length of query: 195
effective length of database: 2,364,660
effective search space: 461108700
effective search space used: 461108700
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)