BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137666.4 + phase: 0
(1451 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AU089582 112 5e-41
AV427422 139 4e-33
TC19412 similar to UP|Q84KB0 (Q84KB0) Pol protein, partial (7%) 98 3e-27
BP055130 106 2e-24
BF177840 96 4e-20
BG662087 94 2e-19
BP054462 92 4e-19
BE122516 92 8e-19
AV410603 74 2e-13
TC18927 similar to PIR|AI2934|AI2934 chromate transport protein ... 69 7e-12
AU251673 64 1e-10
BP085845 59 4e-09
BP046863 59 4e-09
TC11573 similar to UP|Q9M6N4 (Q9M6N4) Pol protein integrase regi... 56 4e-08
BI418821 50 3e-06
TC10011 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, par... 45 6e-05
TC9521 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, part... 44 2e-04
TC11885 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, parti... 42 5e-04
TC18698 42 7e-04
TC13053 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, parti... 37 0.022
>AU089582
Length = 383
Score = 112 bits (279), Expect(2) = 5e-41
Identities = 53/83 (63%), Positives = 65/83 (77%)
Frame = +2
Query: 1145 AQLAEIYIQNIVKLHGVPSSIVSDRDPRFTSRFWRSLQDALGSKLKLSSAYHPQTDGQSE 1204
+Q A+IY+ IV LHGVP SI+SDR +FTS FWRS Q ALG++LK+S+A+HPQTDGQSE
Sbjct: 14 SQYAKIYLDEIVSLHGVPVSIISDRGAQFTSHFWRSFQTALGTRLKMSTAFHPQTDGQSE 193
Query: 1205 RTIQSLEDLLRVCVLEQGGAWDS 1227
RTIQ LED+LR CV + G S
Sbjct: 194 RTIQILEDMLRACVXDLRGXLGS 262
Score = 74.7 bits (182), Expect(2) = 5e-41
Identities = 31/45 (68%), Positives = 38/45 (83%)
Frame = +3
Query: 1223 GAWDSHLPLIEFTYNNSYHSSIGMAPFEALYGRKCKTPLCWFESG 1267
G+WD +L L+EF YNNSY SSI MAPFEALYGR+C++P+ WFE G
Sbjct: 249 GSWDQYLSLMEFAYNNSYRSSI*MAPFEALYGRRCRSPIGWFEVG 383
>AV427422
Length = 417
Score = 139 bits (349), Expect = 4e-33
Identities = 63/133 (47%), Positives = 92/133 (68%)
Frame = +1
Query: 1116 SRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQNIVKLHGVPSSIVSDRDPRFTS 1175
S+G++++ VVVDRL+K +HF+P+ Y +A+I+++ +V+LHGVP SIVSDRDP F S
Sbjct: 19 SKGYEAVLVVVDRLSKFSHFVPLKHPYTAKVIADIFVREVVRLHGVPLSIVSDRDPLFMS 198
Query: 1176 RFWRSLQDALGSKLKLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPLIEFT 1235
FW+ L G+KLK+S+AYHP++DGQ+E + LE LR + +Q +W +P E+
Sbjct: 199 NFWKELFKMQGTKLKMSTAYHPESDGQTEVVNRCLETYLRCFIADQPKSWAHWVPWAEYW 378
Query: 1236 YNNSYHSSIGMAP 1248
YN SYH S G P
Sbjct: 379 YNTSYHVSTGQTP 417
>TC19412 similar to UP|Q84KB0 (Q84KB0) Pol protein, partial (7%)
Length = 519
Score = 97.8 bits (242), Expect(2) = 3e-27
Identities = 47/79 (59%), Positives = 62/79 (77%)
Frame = +3
Query: 1320 RVTPMTGVGRALKSRKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYV 1379
RV+PM GV R K KL+P+FIGP+++ ERVG+V+YR+ LPP LS +H VFHVS LRKY+
Sbjct: 3 RVSPMKGVLRFGKKGKLSPRFIGPFEVLERVGSVSYRLALPPDLSAVHPVFHVSMLRKYL 182
Query: 1380 PDPSHVIPRDDVQVRDNLT 1398
DPSHVI +DVQ+ +L+
Sbjct: 183 YDPSHVIRHEDVQLDVHLS 239
Score = 42.7 bits (99), Expect(2) = 3e-27
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 1417 KEIPLVRVVWGGATGESLTWELESKMQESYPELF 1450
K++ V+V+W G +GE TWE E M+E YP LF
Sbjct: 296 KDVGSVKVLWRGPSGEEATWEAEDIMREKYPHLF 397
>BP055130
Length = 567
Score = 106 bits (265), Expect(2) = 2e-24
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +2
Query: 1118 GHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQNIVKLHGVPSSIVSDRDPRFTSRF 1177
G I VVVDRL+K HF P +Y +Q+AE ++ IVKLHG+P +IVSDRD FTS F
Sbjct: 179 GFTVIIVVVDRLSKYGHFAPHRANYTSSQVAETFVSTIVKLHGMPRAIVSDRDKAFTSAF 358
Query: 1178 WRSLQDALGSKLKLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHL 1229
W+ G+ L +SS+YHPQTDGQ+E + LE LR V E W S+L
Sbjct: 359 WKHFFKLHGTTLNMSSSYHPQTDGQTEALNKCLELYLRCFVHETPRLWVSYL 514
Score = 24.3 bits (51), Expect(2) = 2e-24
Identities = 9/17 (52%), Positives = 13/17 (75%)
Frame = +3
Query: 1229 LPLIEFTYNNSYHSSIG 1245
LP E+ YN+S+ +SIG
Sbjct: 516 LPWAEYCYNSSFQTSIG 566
>BF177840
Length = 410
Score = 95.9 bits (237), Expect = 4e-20
Identities = 54/130 (41%), Positives = 74/130 (56%)
Frame = +2
Query: 1163 SSIVSDRDPRFTSRFWRSLQDALGSKLKLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQG 1222
+SIVSDRD +F S FWR+L +G+KL S+ HPQTDGQ+E ++L LLR +
Sbjct: 11 TSIVSDRDTKFISHFWRTLWGKVGTKLLYSTTCHPQTDGQTEVVNKTLSTLLRSVLERNL 190
Query: 1223 GAWDSHLPLIEFTYNNSYHSSIGMAPFEALYGRKCKTPLCWFESGESVVLGPELVHETTE 1282
W++ LP IEF YN HS+ +PFE +YG TPL + +L + E
Sbjct: 191 KMWETWLPHIEFAYNRVVHSTTKHSPFEIVYGYNPLTPLDLLPMPNTYLLKHKDGKAKAE 370
Query: 1283 KVKMIREKMK 1292
VK + EK+K
Sbjct: 371 FVKRLHEKIK 400
>BG662087
Length = 373
Score = 94.0 bits (232), Expect = 2e-19
Identities = 45/119 (37%), Positives = 70/119 (58%)
Frame = +1
Query: 571 GSMRLCIDYRQLNKVTIKNRYPLPRIDDLMDQLVGAKVFSKIDLRSGYHQIKVKDEDMQK 630
G R+ +DY LNK K+ YPLP ID L+D ++ S +D SGYHQIK+ D K
Sbjct: 16 GKWRMWVDYTDLNKACPKDSYPLPSIDKLVDGASDNELLSLMDAYSGYHQIKMHPSDEDK 195
Query: 631 TAFRTRYGHYEYKVMPFGVTNAPGVFMEYMNRIFHAFLDKFVVVFIDDILIYSKIEEEH 689
TAF T +Y Y+ +PFG+ NA + M+R+F + + + V++D++++ S + H
Sbjct: 196 TAFMTARVNYCYQTIPFGLKNAGATYQXLMDRVFXDXVGRNMEVYLDNMIVKSALRANH 372
>BP054462
Length = 422
Score = 92.4 bits (228), Expect = 4e-19
Identities = 52/141 (36%), Positives = 82/141 (57%), Gaps = 1/141 (0%)
Frame = +1
Query: 1237 NNSYHSSIGMAPFEALYGRKCKTPLCWFESGESVVLGPELVHETTEKVKMIREKMKASQS 1296
N++Y+ S M+PF+ALYGR+ L + +L E + +R + SQ
Sbjct: 1 NSNYNRSAKMSPFQALYGREPPVLLQGTTIPSKIAAVNDLQVGRDELLSDLRANLLKSQD 180
Query: 1297 RQKSYHDKRRKDLEFQEGGHVFLRVTPMTGVGRALK-SRKLTPKFIGPYQISERVGTVAY 1355
++Y +K+R+D+++Q G VFL++ P A K + KL+P++ GPY I ++G VAY
Sbjct: 181 MMRTYANKKRRDVDYQIGDEVFLKLQPYRRRSLAKKMNEKLSPRYYGPYPIVAKIGAVAY 360
Query: 1356 RVGLPPHLSNLHDVFHVSQLR 1376
R+ LP H S +H VFHVS L+
Sbjct: 361 RLELPAH-SRVHPVFHVSLLK 420
>BE122516
Length = 364
Score = 91.7 bits (226), Expect = 8e-19
Identities = 50/115 (43%), Positives = 70/115 (60%)
Frame = +2
Query: 423 GMNWLEYNRVCINCFNKTVHFSSAEEESGAQFLTTKQLKQLERDGILMFSLMASLSLENQ 482
GMNWL N +NC KTV F ++E ++ T K K E + ++ + + +
Sbjct: 17 GMNWLTANDATLNCRKKTVTFGTSEGDAKRVKRTDKVGKASECESDVLLGALETDKSDTG 196
Query: 483 VVIDRLPVVNEFHEVFPDEIPDVPPEREVEFSIDLVPGAKLVSMAPYHMSASELA 537
V + +PVV EF +VFP+E+ ++PPEREVEFSID VPG +S+APY MS ELA
Sbjct: 197 V--EGIPVVREFSDVFPEEVSELPPEREVEFSID*VPGTGPISIAPYRMSLVELA 355
>AV410603
Length = 162
Score = 73.9 bits (180), Expect = 2e-13
Identities = 31/53 (58%), Positives = 43/53 (80%)
Frame = +1
Query: 586 TIKNRYPLPRIDDLMDQLVGAKVFSKIDLRSGYHQIKVKDEDMQKTAFRTRYG 638
T+K+ +P+P +D+L+D+L G++ FSK+DLRSGYHQI VK ED KT FRT +G
Sbjct: 4 TVKDSFPMPTVDELLDELRGSQFFSKLDLRSGYHQILVKPEDRHKTVFRTHHG 162
>TC18927 similar to PIR|AI2934|AI2934 chromate transport protein chrA
[imported] - Agrobacterium tumefaciens
(strain C58, Dupont) {Agrobacterium tumefaciens;},
partial (6%)
Length = 561
Score = 68.6 bits (166), Expect = 7e-12
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Frame = -2
Query: 216 RNKGQSSRPKPYSAPANKGKQRLNDERPQ-KGKNAPVDVVCYKCGVKGHKSNACTQDEKK 274
+ G +R P NK Q+ +RPQ +G ++ + G + E
Sbjct: 500 QGSGGPNRSAPGRFDRNKSFQKKPFQRPQNRGTSSGYS---HSFGNFVPRPTQSDTSEIV 330
Query: 275 CFRCGQKGHVLAECKRGDIVCFSCGEEGHNGAQCTQPK---------------------K 313
C RC +KGH C D+VC++C + GH+G CT PK +
Sbjct: 329 CHRCSKKGHFANRCP--DLVCWNCQKTGHSGKDCTNPKVEAATNAIAARRPAPAANKGKR 156
Query: 314 VRTGGKVFALTGNQTTNEDRHIRGTCFFNSTPLIAIIDTGATHCFIVLECA 364
+V+ ++G ++ D IR N PL + D+GATH FI L CA
Sbjct: 155 PVASARVYTVSGAESHRADGLIRSVGSVNCKPLTILFDSGATHSFIDLACA 3
>AU251673
Length = 413
Score = 64.3 bits (155), Expect = 1e-10
Identities = 41/138 (29%), Positives = 68/138 (48%), Gaps = 1/138 (0%)
Frame = +2
Query: 70 CSEVQKVRFGTHMLAEEADDWWVGLLPVLEQDGAVVTWTVFRREFLNRYFPEDVRGKKEI 129
CS+ + V + L A DW+ L TW F EF+NR+ P+ VR
Sbjct: 5 CSDTRAVELASFQLEGVARDWYNVLTRAKPVGSPPWTWADFSAEFMNRFLPQSVRDGFVR 184
Query: 130 EFLELKQGD-MSVTEYAAKFTELAKFYPHYTAETAEFSKCIKFENGLRADIKRSIGYQKI 188
+F L+Q + M+V+EY+A FT L+++ P+ E + +F GL+ + +S+ K
Sbjct: 185 DFERLEQAEGMTVSEYSAHFTHLSRYVPY---PLLEEERVKRFVRGLKEYLFKSVVGSKS 355
Query: 189 RIFSELVSSCRIYEEDTK 206
SE++S + E+ K
Sbjct: 356 STLSEVLSLALLVEQRQK 409
>BP085845
Length = 464
Score = 59.3 bits (142), Expect = 4e-09
Identities = 36/106 (33%), Positives = 57/106 (52%)
Frame = -2
Query: 1332 KSRKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIPRDDV 1391
K RK K IGP++I E V +AY + +L H V HV+ L + + D S I + V
Sbjct: 421 KKRKTESKIIGPFKILEMVCLIAY*LTHSLYLLAAHIVLHVTLLWRNLYDQSQNICHEGV 242
Query: 1392 QVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGESLTWE 1437
+ ++ + P+ + D KV+ +R K I V+V+W G +G +WE
Sbjct: 241 XLGEHWSHMEHPIVMVDMKVRCMRPKNIDDVKVIWRGLSG*EKSWE 104
>BP046863
Length = 580
Score = 59.3 bits (142), Expect = 4e-09
Identities = 35/103 (33%), Positives = 60/103 (57%), Gaps = 1/103 (0%)
Frame = +1
Query: 1276 LVHETTEKVKMIREKMKASQSRQKSYHDKRRKDLEFQEGGHVFLRVTPMTGVGRAL-KSR 1334
L+ E + +R + +Q + ++ +K R+ +++Q G VFL++ P A K++
Sbjct: 274 LIEERDALLLELRGNLLKAQDQMRAQANKHRRYVDYQVGNWVFLKLQPYKLQNLAQRKNQ 453
Query: 1335 KLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQLRK 1377
KL+P+F GP+++ ERV VAY + L S +H VFH+S L K
Sbjct: 454 KLSPRFYGPFKVLERVVQVAY*LDLXSE-SRVHPVFHLSLLEK 579
>TC11573 similar to UP|Q9M6N4 (Q9M6N4) Pol protein integrase region
(Fragment), partial (10%)
Length = 572
Score = 56.2 bits (134), Expect = 4e-08
Identities = 29/90 (32%), Positives = 48/90 (53%)
Frame = +2
Query: 1172 RFTSRFWRSLQDALGSKLKLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGAWDSHLPL 1231
+FTS+ + D +G +++ SS HPQT+GQ+E + + ++ + E G W LP+
Sbjct: 20 QFTSKQTQDFCDGMGIQMRFSSVKHPQTNGQTEAANKVILKGIKRRLYEAEGRWIDELPI 199
Query: 1232 IEFTYNNSYHSSIGMAPFEALYGRKCKTPL 1261
+ ++YN SSI PF YG P+
Sbjct: 200 VLWSYNTMPQSSIKETPF*LTYGADTMLPV 289
>BI418821
Length = 614
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Frame = +2
Query: 228 SAPANKGKQRLNDERPQKGKNAPVDVVCYKCGVKGHKSNACTQDEKK--------CFRCG 279
SAP G R ER G CY CG GH + C + C+ CG
Sbjct: 314 SAPRGFGGWR-GGERRNGGGGGGGGGGCYNCGDTGHLARDCHRSNNNGGGGGGAACYNCG 490
Query: 280 QKGHVLAECKR-------GDIVCFSCGEEGHNGAQCTQ 310
GH+ +C R G C++CG+ GH C +
Sbjct: 491 DAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNR 604
Score = 40.4 bits (93), Expect = 0.002
Identities = 16/52 (30%), Positives = 23/52 (43%), Gaps = 8/52 (15%)
Frame = +2
Query: 275 CFRCGQKGHVLAECKR--------GDIVCFSCGEEGHNGAQCTQPKKVRTGG 318
C+ CG GH+ +C R G C++CG+ GH C + GG
Sbjct: 392 CYNCGDTGHLARDCHRSNNNGGGGGGAACYNCGDAGHLARDCNRSNNNSGGG 547
Score = 37.7 bits (86), Expect = 0.013
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Frame = +2
Query: 255 CYKCGVKGHKSNACTQDEKK-------CFRCGQKGHVLAECKRGD 292
CY CG GH + C + C+ CG GH+ +C R +
Sbjct: 476 CYNCGDAGHLARDCNRSNNNSGGGGAGCYNCGDTGHLARDCNRSN 610
>TC10011 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, partial (62%)
Length = 684
Score = 45.4 bits (106), Expect = 6e-05
Identities = 34/108 (31%), Positives = 49/108 (44%), Gaps = 9/108 (8%)
Frame = +2
Query: 227 YSAPANKGKQRLN-DERPQKGKNAPVDVVCYKCGVKGHKS---NACTQDEKKCFRCGQKG 282
+S P + R N D R +G V+ K G +G++ +CF CG G
Sbjct: 221 FSDPRDADDARYNLDGRDVEGSRIVVEFA--KGGPRGNREYLGRGPPPGSGRCFNCGLDG 394
Query: 283 HVLAECKRGD--IVCFSCGEEGHNGAQC-TQPKK--VRTGGKVFALTG 325
H +CK GD C+ CG+ GH C PKK +T ++F+ TG
Sbjct: 395 HWARDCKAGDWKNKCYRCGDRGHVERNCKNSPKKNEWQTWKELFSFTG 538
>TC9521 similar to UP|Q9FYA7 (Q9FYA7) Splicing factor RSZ33, partial (56%)
Length = 598
Score = 43.9 bits (102), Expect = 2e-04
Identities = 15/37 (40%), Positives = 23/37 (61%), Gaps = 2/37 (5%)
Frame = +1
Query: 255 CYKCGVKGHKSNACTQDE--KKCFRCGQKGHVLAECK 289
C+ CG+ GH + C + KC+RCG++GH+ CK
Sbjct: 391 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCK 501
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 274 KCFRCGQKGHVLAECKRGD--IVCFSCGEEGHNGAQC-TQPKKV 314
+CF CG GH +CK GD C+ CGE GH C PKK+
Sbjct: 388 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKL 519
>TC11885 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, partial (26%)
Length = 555
Score = 42.4 bits (98), Expect = 5e-04
Identities = 23/78 (29%), Positives = 37/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 221 SSRPKPYSAPANKGKQR----LNDERPQK-GKNAPVDVVCYKCGVKGHKSNACTQDEKKC 275
S R PY + +G R N +RP + P +C+ CG+ GH ++ CT + C
Sbjct: 284 SYRDAPYRRDSRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECT-TKSLC 460
Query: 276 FRCGQKGHVLAECKRGDI 293
+ C + GH+ + C I
Sbjct: 461 WNCKEPGHMASSCPNDGI 514
Score = 32.7 bits (73), Expect = 0.42
Identities = 23/96 (23%), Positives = 35/96 (35%)
Frame = +2
Query: 214 EKRNKGQSSRPKPYSAPANKGKQRLNDERPQKGKNAPVDVVCYKCGVKGHKSNACTQDEK 273
EKR SR + S + +++ +R Y+ S +
Sbjct: 194 EKRKMSSDSRSRSRSRSRSPMDRKIRSDR-----------FSYRDAPYRRDSRRGFSRDN 340
Query: 274 KCFRCGQKGHVLAECKRGDIVCFSCGEEGHNGAQCT 309
C C + GH EC I C +CG GH ++CT
Sbjct: 341 LCKNCKRPGHFARECPNVAI-CHNCGLPGHIASECT 445
>TC18698
Length = 808
Score = 42.0 bits (97), Expect = 7e-04
Identities = 20/61 (32%), Positives = 35/61 (56%)
Frame = -2
Query: 629 QKTAFRTRYGHYEYKVMPFGVTNAPGVFMEYMNRIFHAFLDKFVVVFIDDILIYSKIEEE 688
+KT + +Y Y+VMP G+ N + M++IFH + K V V+++D+++ S E
Sbjct: 804 KKTTLKINRVNYYYQVMPLGLKNI*TTYQRLMDKIFHKQI*KNVEVYVEDMIVKSSQE*F 625
Query: 689 H 689
H
Sbjct: 624 H 622
>TC13053 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, partial (9%)
Length = 450
Score = 37.0 bits (84), Expect = 0.022
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 253 VVCYKCGVKGHKSNACTQDEKKCFRCGQKGHVLAECKRG 291
VVC C GH S C C CG +GH+ EC G
Sbjct: 3 VVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSG 119
Score = 33.9 bits (76), Expect = 0.19
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 275 CFRCGQKGHVLAECKRGDIVCFSCGEEGHNGAQC 308
C C Q GH+ +C ++C +CG GH +C
Sbjct: 9 CRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC 110
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,174,452
Number of Sequences: 28460
Number of extensions: 354635
Number of successful extensions: 1600
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of query: 1451
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1349
effective length of database: 1,994,680
effective search space: 2690823320
effective search space used: 2690823320
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC137666.4