BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137553.5 - phase: 0
(446 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP055604 60 9e-10
AV778571 58 3e-09
BP054702 47 6e-06
AV411169 47 8e-06
BP043329 44 5e-05
TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein ... 44 7e-05
BP085988 42 2e-04
BG662453 42 2e-04
TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resista... 40 6e-04
BP067300 40 0.001
BP063158 39 0.001
AW719637 38 0.004
BP065135 37 0.005
TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%) 36 0.015
TC9369 similar to UP|Q93X72 (Q93X72) Leucine-rich repeat resista... 33 0.073
TC14723 33 0.095
TC14398 similar to UP|Q96477 (Q96477) LRR protein, partial (86%) 33 0.12
TC9228 weakly similar to UP|Q8YPY5 (Q8YPY5) Glycine cleavage T-p... 32 0.16
TC11841 weakly similar to GB|BAC57345.1|28411900|AP005473 recept... 32 0.21
TC7933 weakly similar to UP|AAQ56728 (AAQ56728) Polygalacturonas... 32 0.28
>BP055604
Length = 464
Score = 59.7 bits (143), Expect = 9e-10
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -3
Query: 373 SLQKLEISKFPVLTSLPDNFEQLENLQKLSIDRCPGLENRLDSRTGEDWYKIAHVPN 429
SL+ L I P L SLPD F+ L L++L I+ CP L+ R TGEDW KIAHVP+
Sbjct: 447 SLRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPELKERCKEGTGEDWDKIAHVPD 277
Score = 30.0 bits (66), Expect = 0.80
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 278 SLQVLGFALCNSLKSLPQSTTALTSLQRLQIHYCPKL 314
SL+ L C L+SLP L++L+RL I CP+L
Sbjct: 447 SLRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPEL 337
>AV778571
Length = 452
Score = 58.2 bits (139), Expect = 3e-09
Identities = 46/145 (31%), Positives = 72/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 188 SIQSIP-IFELPSLPSVKEVYVGGETEEFNDHGASFLRDIAGKMPNLTELMIEGFHQITV 246
SI IP + LP+L + VY + + G + L L IEG +I
Sbjct: 51 SITQIPDLSGLPNLEKLSFVY---------SENLIKIHESVGFLNKLRILDIEGCCKIRT 203
Query: 247 LPNELRSLSSLQKLYISCCGNLESIPNMSSSSLQVLGFALCNS-LKSLPQSTTALTSLQR 305
P L+SL++LY+S C +LES P + + + + ++ +K LP S LT L+R
Sbjct: 204 FPP--MKLASLEELYLSHCSSLESFPEILAKMENITLIGVYHTPIKELPSSIGNLTRLRR 377
Query: 306 LQIHYCPKLILPANMNMLTSLRKVT 330
L++H C L LP+ M M T L +++
Sbjct: 378 LELHGCGMLQLPSGMAM*TELEELS 452
>BP054702
Length = 528
Score = 47.0 bits (110), Expect = 6e-06
Identities = 37/110 (33%), Positives = 60/110 (53%), Gaps = 4/110 (3%)
Frame = -3
Query: 323 LTSLRKVTIMGADKRRRLYNGLEH--IP-SLENLSLTDFPFLRSLP-DWLGNTLSLQKLE 378
LTSL + + G + + L+ +P SL L L +F L+ L + L + SL +L
Sbjct: 478 LTSLSHLYVFGFGDQDLMNTLLKERLLPTSLVFLGLYNFSSLKFLEGNGLQHLSSLHQLH 299
Query: 379 ISKFPVLTSLPDNFEQLENLQKLSIDRCPGLENRLDSRTGEDWYKIAHVP 428
I K P L SLP++ + +L L++++CP LE R R G+ W K++ +P
Sbjct: 298 IDKCPSLVSLPED-QLPHSLAVLNLEKCPLLEARYRIRKGKHWSKVSRIP 152
Score = 33.5 bits (75), Expect = 0.073
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = -3
Query: 180 MLSQLSKLSIQSIPIFELPSLPSVKEVYVGGETEEFNDHGASFLRDIAGKMPNLTELMIE 239
+LS +SK S + P L S+ +YV G F D + + + T L+
Sbjct: 526 ILSSMSKHEFGS----QFPHLTSLSHLYVFG----FGDQ--DLMNTLLKERLLPTSLVFL 377
Query: 240 GFHQITVLP----NELRSLSSLQKLYISCCGNLESIP-NMSSSSLQVLGFALCNSLKS 292
G + + L N L+ LSSL +L+I C +L S+P + SL VL C L++
Sbjct: 376 GLYNFSSLKFLEGNGLQHLSSLHQLHIDKCPSLVSLPEDQLPHSLAVLNLEKCPLLEA 203
>AV411169
Length = 424
Score = 46.6 bits (109), Expect = 8e-06
Identities = 22/38 (57%), Positives = 24/38 (62%)
Frame = +3
Query: 397 NLQKLSIDRCPGLENRLDSRTGEDWYKIAHVPNFESDF 434
+LQ LSI CP L R TGEDW KIAHVP + DF
Sbjct: 3 SLQLLSIALCPALAERCKDGTGEDWDKIAHVPKVQIDF 116
>BP043329
Length = 484
Score = 43.9 bits (102), Expect = 5e-05
Identities = 40/135 (29%), Positives = 72/135 (52%), Gaps = 4/135 (2%)
Frame = +3
Query: 247 LPNELRSLSSLQKLYISCCGNLESIPNMSSS--SLQVLGFALCNSLKSLPQSTTALTSLQ 304
+P E+ +L++L+ ++++ C + IP+ + L+ L AL + S+P S T LTSL+
Sbjct: 81 IPPEIGNLTNLEVVWLTQCNLVGVIPDSIGNLKKLKDLDLALNDLYGSIPSSLTGLTSLR 260
Query: 305 RLQIHYCPKLI--LPANMNMLTSLRKVTIMGADKRRRLYNGLEHIPSLENLSLTDFPFLR 362
++++ Y L LP M LT LR + R+ L +P LE+L+L + F
Sbjct: 261 QIEL-YNNSLSGELPRGMGNLTELRLLDASMNHLTGRIPEELCSLP-LESLNLYENRFEG 434
Query: 363 SLPDWLGNTLSLQKL 377
LP + ++ +L +L
Sbjct: 435 ELPASIADSPNLYEL 479
Score = 30.4 bits (67), Expect = 0.62
Identities = 19/89 (21%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 316 LPANMNMLTSLRKVTIM-GADKRRRLYNGLEHIPSLENLSLTDFPFLRSLPDWLGNTLSL 374
+P ++ LT+L+ + + R+ + ++ +LE + LT + +PD +GN L
Sbjct: 6 IPPSLGTLTTLKMLNLSYNPFYPGRIPPEIGNLTNLEVVWLTQCNLVGVIPDSIGNLKKL 185
Query: 375 QKLEISKFPVLTSLPDNFEQLENLQKLSI 403
+ L+++ + S+P + L +L+++ +
Sbjct: 186 KDLDLALNDLYGSIPSSLTGLTSLRQIEL 272
>TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein KR4,
partial (3%)
Length = 569
Score = 43.5 bits (101), Expect = 7e-05
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 367 WLGNTLSLQKLEISKFPVLTSLPDNFEQL-ENLQKLSIDRCPGLENRLDSRTGEDWYKIA 425
WL + SL+KLEI P L SLP+ E L +L L I CP LE S G++ KIA
Sbjct: 56 WLQHLTSLEKLEICYSPQLESLPE--EGLPSSLSVLIIXPCPLLEASCHSHGGKECPKIA 229
Query: 426 HVP 428
H+P
Sbjct: 230 HIP 238
>BP085988
Length = 474
Score = 42.4 bits (98), Expect = 2e-04
Identities = 19/34 (55%), Positives = 23/34 (66%)
Frame = -2
Query: 395 LENLQKLSIDRCPGLENRLDSRTGEDWYKIAHVP 428
L L++L I+ CP L+ R TGEDW KIAHVP
Sbjct: 473 LSALERLIIEGCPELKERCKEGTGEDWDKIAHVP 372
>BG662453
Length = 460
Score = 42.0 bits (97), Expect = 2e-04
Identities = 41/126 (32%), Positives = 66/126 (51%), Gaps = 4/126 (3%)
Frame = +2
Query: 268 LESIPNMSS--SSLQVLGFALCNSLKSLPQSTTALTSLQRLQIHYCPKLILPANMNM-LT 324
L S+PN S L+VL + N ++ LP+S +L+ L ++ LP M L
Sbjct: 74 LRSLPNSVGCLSKLKVLNVS-GNLIEYLPKSIENCRALEELNANFNKLSQLPDTMGFELL 250
Query: 325 SLRKVTIMGADKRRRLYNGLEHIPSLENLSLTDFPFLRSLPDWLGNTLSLQKLEISK-FP 383
+L+K+++ ++K L H+ SL+ L LRSLPD L N ++L+ L +S+ F
Sbjct: 251 NLKKLSV-NSNKLVFLPRSTSHLTSLKILDAR-LNCLRSLPDDLENLINLETLNVSQNFQ 424
Query: 384 VLTSLP 389
L +LP
Sbjct: 425 YLDTLP 442
>TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resistance
protein-like protein MsR1, partial (5%)
Length = 766
Score = 40.4 bits (93), Expect = 6e-04
Identities = 24/64 (37%), Positives = 34/64 (52%)
Frame = +1
Query: 347 IPSLENLSLTDFPFLRSLPDWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKLSIDRC 406
+ +LE L L+ L+ LPD +G L+ L+IS L SLP+ L NL+ L + C
Sbjct: 16 LENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSC 195
Query: 407 PGLE 410
G E
Sbjct: 196 AGCE 207
>BP067300
Length = 523
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/63 (39%), Positives = 31/63 (48%)
Frame = -2
Query: 366 DWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKLSIDRCPGLENRLDSRTGEDWYKIA 425
D L SL+ L I+ P L +P ++ L I R P LE R R EDW KIA
Sbjct: 507 DSLQKLTSLETLGIACCPKLQCMPAKLPC--SISTLHIVRSPRLEERCRGRKSEDWPKIA 334
Query: 426 HVP 428
H+P
Sbjct: 333 HIP 325
>BP063158
Length = 431
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/82 (40%), Positives = 46/82 (55%), Gaps = 4/82 (4%)
Frame = -1
Query: 349 SLENLSLTDFPFLRSLPDWLG--NTLSLQKLEISKFPVLTSLPDNFEQL-ENLQKLSIDR 405
SL L ++ FP L+ L D+ G + SL +L +S L LP+ E L +++ LSI R
Sbjct: 404 SLHYLDISHFPNLKKL-DYRGLCHLPSLTELRLSDCSGLPCLPE--EGLPKSISTLSIRR 234
Query: 406 -CPGLENRLDSRTGEDWYKIAH 426
CP L+ R GEDW KI+H
Sbjct: 233 MCPLLKQRCQKPHGEDWGKISH 168
>AW719637
Length = 571
Score = 37.7 bits (86), Expect = 0.004
Identities = 38/167 (22%), Positives = 73/167 (42%), Gaps = 12/167 (7%)
Frame = +2
Query: 247 LPNELRSLSSLQKLYI----------SCCGNLESIPNMSSSSLQVLGFALCNSLKSLPQS 296
+P E+ SLS+LQ L + S GNL S+ N++ + G +P+S
Sbjct: 14 IPEEICSLSNLQSLSLHTNFLEGNIPSNIGNLSSLVNLTLFDNHLSG--------EIPKS 169
Query: 297 TTALTSLQRLQIHYCPKLI--LPANMNMLTSLRKVTIMGADKRRRLYNGLEHIPSLENLS 354
+L +LQ + L +P + TSL + + L + ++ + ++ ++
Sbjct: 170 IGSLRNLQVFRAGGNKNLKGEIPWEIGNCTSLVMLGLAETSISGSLPSSIQLLKRIKTIA 349
Query: 355 LTDFPFLRSLPDWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKL 401
+ S+P+ +GN LQ L + + + S+P +L L+ L
Sbjct: 350 IYTTLLSGSIPEEIGNCSELQNLYLYQNSISGSIPSQIGELSKLKSL 490
Score = 33.9 bits (76), Expect = 0.056
Identities = 26/116 (22%), Positives = 57/116 (48%), Gaps = 2/116 (1%)
Frame = +2
Query: 290 LKSLPQSTTALTSLQRLQIHY-CPKLILPANMNMLTSLRKVTIMGADKRRRLYNGLEHIP 348
L +P+ +L++LQ L +H + +P+N+ L+SL +T+ + + +
Sbjct: 5 LGEIPEEICSLSNLQSLSLHTNFLEGNIPSNIGNLSSLVNLTLFDNHLSGEIPKSIGSLR 184
Query: 349 SLENLSLTDFPFLRSLPDW-LGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKLSI 403
+L+ L+ W +GN SL L +++ + SLP + + L+ ++ ++I
Sbjct: 185 NLQVFRAGGNKNLKGEIPWEIGNCTSLVMLGLAETSISGSLPSSIQLLKRIKTIAI 352
>BP065135
Length = 492
Score = 37.4 bits (85), Expect = 0.005
Identities = 18/55 (32%), Positives = 30/55 (53%)
Frame = -3
Query: 374 LQKLEISKFPVLTSLPDNFEQLENLQKLSIDRCPGLENRLDSRTGEDWYKIAHVP 428
L +L I + P L +LP++ L S+++CP LE R G+ W K++ +P
Sbjct: 244 LHQLHIDQCPSLVALPEDATGHTALAV*SVEKCP*LEARYQIGKGKHWSKVSRIP 80
>TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%)
Length = 586
Score = 35.8 bits (81), Expect = 0.015
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 340 LYNGLEHIPSLENLSLTDFPFLRSLPDWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQ 399
L + ++ ++ L ++D L LP+ +G L+KL + LT LP + LENL+
Sbjct: 9 LPKSITNLEQVQFLDISDCISLSHLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 188
Query: 400 KLSID 404
++ D
Sbjct: 189 EVECD 203
>TC9369 similar to UP|Q93X72 (Q93X72) Leucine-rich repeat resistance
protein-like protein, partial (70%)
Length = 859
Score = 33.5 bits (75), Expect = 0.073
Identities = 45/169 (26%), Positives = 73/169 (42%), Gaps = 7/169 (4%)
Frame = +1
Query: 102 LGRLVDVKLMNC----INCSQLPPLGKLPLLTTLYLSQMTNVKYIDDSPYEISTENAFPS 157
+GRL +K++N + + P +G+L LT LYLS N+F
Sbjct: 67 IGRLKRLKILNLRWNKLQDAIPPEIGELKSLTHLYLSF-----------------NSFKG 195
Query: 158 LTEMTLYDLPNLKSVLRIEGVEMLSQLSKLSIQSIPIFELPSLPSVKEVYVGGETEEFND 217
L +LP+L+ + E I IP EL +L +++ + G N+
Sbjct: 196 EIPKELANLPDLRYLYLHEN---------RLIGRIPP-ELGTLQNLRHLDAG------NN 327
Query: 218 HGASFLRD---IAGKMPNLTELMIEGFHQITVLPNELRSLSSLQKLYIS 263
H +R+ I G P L L + + +P +L +LSSL+ LY+S
Sbjct: 328 HLVGTIRELIRIEGCFPALRNLYLNNNYFTGGMPAQLANLSSLEILYLS 474
>TC14723
Length = 705
Score = 33.1 bits (74), Expect = 0.095
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +1
Query: 393 EQLENLQKLSIDRCPGLENRLDSRTGEDWYKIAHVPNFE 431
+ L +LQ L I CP L R T D KIAHVP E
Sbjct: 1 QHLTSLQLLRIQDCPTLAERCKEGTEVDLDKIAHVPKVE 117
>TC14398 similar to UP|Q96477 (Q96477) LRR protein, partial (86%)
Length = 982
Score = 32.7 bits (73), Expect = 0.12
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 11/174 (6%)
Frame = +1
Query: 242 HQITVLPNELRSLSSLQKLYIS---CCGNLESIPNMSSSSLQVLGFALCNS--------L 290
+QIT+L + S++ + S CC + S L ++ FA+ NS
Sbjct: 82 NQITLL--SVLGFSTMAPTFFSFFFCC--------VVSIYLTLVPFAVANSEGDALYAFK 231
Query: 291 KSLPQSTTALTSLQRLQIHYCPKLILPANMNMLTSLRKVTIMGADKRRRLYNGLEHIPSL 350
+SL L S + C + N +T +V + + L L ++ SL
Sbjct: 232 QSLSDPDNVLQSWDATLVSPCTWFHVTCQDNSVT---RVDLGNLNLSGHLVPDLGNLHSL 402
Query: 351 ENLSLTDFPFLRSLPDWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKLSID 404
+ L L + ++P+ LGN SL L++ V S+P + L+NL+ L ++
Sbjct: 403 QYLELYENNIQGTIPEELGNLQSLISLDLYHNNVSGSIPSSLGNLKNLRFLRLN 564
Score = 27.3 bits (59), Expect = 5.2
Identities = 21/88 (23%), Positives = 42/88 (46%)
Frame = +1
Query: 316 LPANMNMLTSLRKVTIMGADKRRRLYNGLEHIPSLENLSLTDFPFLRSLPDWLGNTLSLQ 375
L ++ L SL+ + + + + + L ++ SL +L L S+P LGN +L+
Sbjct: 370 LVPDLGNLHSLQYLELYENNIQGTIPEELGNLQSLISLDLYHNNVSGSIPSSLGNLKNLR 549
Query: 376 KLEISKFPVLTSLPDNFEQLENLQKLSI 403
L ++ + +P + L NL+ L +
Sbjct: 550 FLRLNNNHLTGQIPKSLSTLPNLKVLDV 633
>TC9228 weakly similar to UP|Q8YPY5 (Q8YPY5) Glycine cleavage T-protein,
aminomethyltransferase, partial (6%)
Length = 576
Score = 32.3 bits (72), Expect = 0.16
Identities = 19/55 (34%), Positives = 32/55 (57%), Gaps = 1/55 (1%)
Frame = +1
Query: 376 KLEISKFPVLTSLPDNFEQLENLQKLSIDRCP-GLENRLDSRTGEDWYKIAHVPN 429
+L IS L ++PD + + L++L I P + RL + GED++K+ HVP+
Sbjct: 1 RLSISDCNKLKTVPDGLKFVTGLRELEIRWMPTSFKTRLGT-AGEDYHKVQHVPS 162
>TC11841 weakly similar to GB|BAC57345.1|28411900|AP005473 receptor protein
kinase CLAVATA1 precursor-like porotein {Oryza sativa
(japonica cultivar-group);} , partial (11%)
Length = 504
Score = 32.0 bits (71), Expect = 0.21
Identities = 21/83 (25%), Positives = 40/83 (47%)
Frame = +2
Query: 323 LTSLRKVTIMGADKRRRLYNGLEHIPSLENLSLTDFPFLRSLPDWLGNTLSLQKLEISKF 382
LT L K+++ +L + SLE L +++ F LP +GN SLQ L ++
Sbjct: 95 LTKLVKLSMSNNFMSGKLPDNAADFKSLEFLDISNNLFSSPLPPEIGNFGSLQNLSLAGN 274
Query: 383 PVLTSLPDNFEQLENLQKLSIDR 405
+P++ + +++ L + R
Sbjct: 275 NFSGRIPNSISDMASIKSLDLSR 343
>TC7933 weakly similar to UP|AAQ56728 (AAQ56728) Polygalacturonase
inhibiting protein, partial (78%)
Length = 1320
Score = 31.6 bits (70), Expect = 0.28
Identities = 29/113 (25%), Positives = 47/113 (40%)
Frame = +3
Query: 293 LPQSTTALTSLQRLQIHYCPKLILPANMNMLTSLRKVTIMGADKRRRLYNGLEHIPSLEN 352
+P S L L+ L H PKL P ++ K+T L++
Sbjct: 267 IPPSVGDLPYLEYLDFHKLPKLTGPIQ----PAIAKLT------------------KLKS 380
Query: 353 LSLTDFPFLRSLPDWLGNTLSLQKLEISKFPVLTSLPDNFEQLENLQKLSIDR 405
LS+T +PD+L +L L +S + +P + +L NL L++DR
Sbjct: 381 LSITWTNVSGPIPDFLAQLKNLDSLYLSFNNLSGHIPASLSRLPNLLSLNLDR 539
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,646,449
Number of Sequences: 28460
Number of extensions: 105994
Number of successful extensions: 607
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of query: 446
length of database: 4,897,600
effective HSP length: 93
effective length of query: 353
effective length of database: 2,250,820
effective search space: 794539460
effective search space used: 794539460
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC137553.5