BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137079.8 + phase: 0
(518 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14740 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial... 450 e-127
TC16366 similar to PIR|E96542|E96542 scarecrow-like protein [imp... 244 2e-65
CN825078 233 4e-62
TC14825 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, partia... 197 5e-51
TC14844 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional ... 167 5e-42
AV415616 154 3e-38
AI967706 134 4e-32
TC18636 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial... 117 6e-27
AV414168 116 8e-27
BF177544 114 4e-26
TC16678 similar to UP|Q8GVE2 (Q8GVE2) Chitin-inducible gibberell... 110 6e-25
BP085370 93 3e-24
TC11080 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin r... 106 8e-24
AV770800 88 4e-18
BP077395 79 2e-15
TC17852 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, ... 77 9e-15
TC14505 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial ... 76 1e-14
AV418844 69 1e-12
TC16184 69 2e-12
AV408567 60 7e-10
>TC14740 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (57%)
Length = 1406
Score = 450 bits (1158), Expect = e-127
Identities = 224/347 (64%), Positives = 275/347 (78%)
Frame = +1
Query: 172 KMVSVSGNPIQRLGAYMLEALVARIASSGSIIYKSLKCKEPITATSKELLSHMHVLYEIC 231
KMVSV+G+P QRLGAY+LE L AR+ SGS+IYK+LKC++P T KEL+S+MH+LY+IC
Sbjct: 4 KMVSVAGDPSQRLGAYLLEGLRARLELSGSLIYKALKCEQP---TGKELMSYMHILYQIC 174
Query: 232 PYLKFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQALAGKPGGPPKIRITGFD 291
PY KF Y+SAN IAEA+ +ES IHIIDFQI QG QW LIQALA +PGGPP IRITG D
Sbjct: 175 PYWKFAYISANAAIAEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRITGVD 354
Query: 292 DSTSAYARGGGLGIVGERLSKLAESYNVAFEFHAIGVSPSEVRLEDLELRRGEAIAVNFA 351
DS S +ARGGGL IVGERLS A SY V FEFH+ +S EV E+L +R GEA+AVNF
Sbjct: 355 DSQSFHARGGGLEIVGERLSDFARSYGVPFEFHSAAMSGCEVERENLGVRPGEALAVNFP 534
Query: 352 MMLHHVPDEDVHGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFA 411
+LHH+PDE V +NHRDRL+RL K LSPKVVTL EQESNTN PFF RF+ET+ YY A
Sbjct: 535 YVLHHMPDESV-STENHRDRLLRLVKSLSPKVVTLAEQESNTNTSPFFNRFMETLEYYTA 711
Query: 412 VFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTP 471
+FESIDVA PR+ ++RI+ EQHC+AR++VN+VACEGAERVERHE+ KW+ F+MAGF
Sbjct: 712 MFESIDVACPRDDKKRISAEQHCVARDIVNMVACEGAERVERHELFGKWKLRFSMAGFKQ 891
Query: 472 YPLSSYINYSIQNLLENYQGHYTLQEKDGALYLGWMNQPLITSSAWR 518
+PLSS + + QNLL ++ +Y L+++DGAL LGWM + L+TSSAWR
Sbjct: 892 WPLSSSVMTATQNLLRDFNHNYRLEQRDGALCLGWMKRALVTSSAWR 1032
>TC16366 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(27%)
Length = 711
Score = 244 bits (623), Expect = 2e-65
Identities = 116/143 (81%), Positives = 127/143 (88%)
Frame = +3
Query: 376 AKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFAVFESIDVALPREHRERINVEQHCL 435
AKCLSPKVVTLVEQE NTN PF RFVETMNYY AVFESIDV LPREH+ERINVEQHCL
Sbjct: 3 AKCLSPKVVTLVEQEFNTNNAPFLQRFVETMNYYQAVFESIDVVLPREHKERINVEQHCL 182
Query: 436 AREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLENYQGHYTL 495
AREVVNLVACEGAERVERHE+L KWR F AGFTPYPL+SYIN SI++LLE+Y+GHYTL
Sbjct: 183 AREVVNLVACEGAERVERHELLNKWRMRFASAGFTPYPLNSYINSSIKDLLESYRGHYTL 362
Query: 496 QEKDGALYLGWMNQPLITSSAWR 518
+E+DGAL+LGWMNQ L+ S AWR
Sbjct: 363 EERDGALFLGWMNQVLVASCAWR 431
>CN825078
Length = 650
Score = 233 bits (595), Expect = 4e-62
Identities = 118/217 (54%), Positives = 155/217 (71%)
Frame = +3
Query: 157 ENDMETAEWLMSELSKMVSVSGNPIQRLGAYMLEALVARIASSGSIIYKSLKCKEPITAT 216
E++M + L+ + VS++G PIQRLGAYM+E LVAR +SG+ IY +L C+EP
Sbjct: 12 EDNMRDFDQLIEKARSAVSINGEPIQRLGAYMVEGLVARKEASGNSIYHALNCREP---E 182
Query: 217 SKELLSHMHVLYEICPYLKFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQALA 276
+ELLS+M +L+EICPYLKFGYM+ANG IAEA ++E IHIIDFQI QG QWM+L+QALA
Sbjct: 183 GEELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALA 362
Query: 277 GKPGGPPKIRITGFDDSTSAYARGGGLGIVGERLSKLAESYNVAFEFHAIGVSPSEVRLE 336
+PGG P +RITG DD S YARG GL IVG+RL+ ++E + + EFH + V +V +
Sbjct: 363 ARPGGAPHVRITGIDDPVSKYARGDGLDIVGKRLALMSEKFGIPVEFHGVPVFGPDVTRD 542
Query: 337 DLELRRGEAIAVNFAMMLHHVPDEDVHGGKNHRDRLV 373
L++R GEA+AVNF + LHH DE V N RD L+
Sbjct: 543 MLDIRPGEALAVNFPLQLHHTADESV-DVSNPRDGLL 650
>TC14825 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, partial (47%)
Length = 1392
Score = 197 bits (500), Expect = 5e-51
Identities = 111/295 (37%), Positives = 174/295 (58%), Gaps = 5/295 (1%)
Frame = +2
Query: 229 EICPYLKFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQALAGKPGGPPKIRIT 288
E CPYLKF + +AN I EA + + +H+IDF INQG+QW +L+QALA +PGGPP R+T
Sbjct: 2 ETCPYLKFAHFTANQAILEAFQGKDRVHVIDFAINQGMQWPALMQALALRPGGPPAFRLT 181
Query: 289 GFDDSTSAYARGGGLGIVGERLSKLAESYNVAFE---FHAIGVSPSEVRLEDLELRRGEA 345
G A L VG +L++LAE+ +V FE F A ++ + + DL E+
Sbjct: 182 GI--GPPAPDNSDHLQQVGWKLAQLAETIHVQFEYRGFVANSLADLDASMLDLRPPEEES 355
Query: 346 IAVNFAMMLHHVPDEDVHGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVET 405
+AVN LH + +++ + + + P+++T+VEQE+ N F RF E+
Sbjct: 356 VAVNSVFELH-----KLLARPGALEKVFSVIRQVQPEILTVVEQEAGHNGASFLDRFTES 520
Query: 406 MNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFT 465
++YY A+F+S++ + E +++ E + L +++ N+VACEG++R+ERHE L +WR+ F
Sbjct: 521 LHYYSALFDSLEGSSAVESQDKAMTEIY-LGKQICNVVACEGSDRIERHETLTQWRTRFN 697
Query: 466 MAGFTPYPLSSYINYSIQNLLENYQG--HYTLQEKDGALYLGWMNQPLITSSAWR 518
AG +P L S LL + G Y ++E +G L LGW +PLI +SAW+
Sbjct: 698 SAGLSPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLTLGWHTRPLIATSAWQ 862
>TC14844 similar to UP|Q8L553 (Q8L553) SCARECROW transcriptional
regulator-like, partial (49%)
Length = 1051
Score = 167 bits (422), Expect = 5e-42
Identities = 95/216 (43%), Positives = 130/216 (59%)
Frame = +3
Query: 303 LGIVGERLSKLAESYNVAFEFHAIGVSPSEVRLEDLELRRGEAIAVNFAMMLHHVPDEDV 362
L VG+ L + AE + FEF + +E+ E L E +AVNFA L +PDE V
Sbjct: 90 LKTVGDMLGQQAERLRIGFEFKVVSCKLAELTREALGCEPDETLAVNFAFKLFRMPDESV 269
Query: 363 HGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFAVFESIDVALPR 422
+N RD L+R K LSP+VVTLVEQE NTN PF R E+ +YY A+F+SI+ + R
Sbjct: 270 -STENPRDELLRRVKALSPRVVTLVEQELNTNTAPFVPRVTESCSYYSALFDSIESTVAR 446
Query: 423 EHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSI 482
E ER+ +EQ L+R+V N VACEG +RVER EV KWR+ +MAGF P+ + SI
Sbjct: 447 ESLERVKIEQG-LSRKVGNSVACEGRDRVERCEVFGKWRARMSMAGFRLRPVGQRVAESI 623
Query: 483 QNLLENYQGHYTLQEKDGALYLGWMNQPLITSSAWR 518
L + T++E++G + GW+ + L +SAWR
Sbjct: 624 TAQL-GAENRVTVKEENGGICCGWVGRTLTVASAWR 728
>AV415616
Length = 316
Score = 154 bits (390), Expect = 3e-38
Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 5/105 (4%)
Frame = +2
Query: 312 KLAESYNVAFEFHAIGVSPSEVRLEDLELRRGEAIAVNFAMMLHHVPDEDVHG-----GK 366
K+A+S NV FEFHAIG SPSEV+L+DLE+R EAIAVNFAMMLHHVPDE V +
Sbjct: 2 KIAKSCNVPFEFHAIGTSPSEVQLQDLEIRPEEAIAVNFAMMLHHVPDESVDTQNQGWSQ 181
Query: 367 NHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFA 411
NHR+RL+RLAKCLSPKVVTLVEQESNTN LPF RFVETMNYY A
Sbjct: 182 NHRNRLLRLAKCLSPKVVTLVEQESNTNNLPFLPRFVETMNYYLA 316
>AI967706
Length = 357
Score = 134 bits (337), Expect = 4e-32
Identities = 63/113 (55%), Positives = 84/113 (73%)
Frame = +2
Query: 338 LELRRGEAIAVNFAMMLHHVPDEDVHGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELP 397
L R+GEA+ VNFA LHH+ DE V N RD+L+R+ K L+PK+VT+VEQ+ NTN P
Sbjct: 20 LNCRQGEALVVNFAFQLHHMRDESV-STVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSP 196
Query: 398 FFARFVETMNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAER 450
F RF+ YY AVF+S+D LPRE ++R+NVE+ CLAR++VN+VACEG +R
Sbjct: 197 FLPRFIIAYEYYSAVFDSLDATLPRESQDRVNVERQCLARDIVNIVACEGEDR 355
>TC18636 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (10%)
Length = 813
Score = 117 bits (292), Expect = 6e-27
Identities = 50/94 (53%), Positives = 69/94 (73%)
Frame = +1
Query: 425 RERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQN 484
+ I+ EQHC+AR++VN++ACEG ERVE HE+ KWRS F+M GF P PLSS + S++N
Sbjct: 4 KNSISAEQHCVARDIVNMIACEGXERVEXHELFGKWRSRFSMXGFVPCPLSSSVTASVRN 183
Query: 485 LLENYQGHYTLQEKDGALYLGWMNQPLITSSAWR 518
+L + +Y L+ KD ALYL W N+ + T+SAWR
Sbjct: 184 ILNEFNENYRLEHKDVALYLTWKNRAMCTASAWR 285
>AV414168
Length = 208
Score = 116 bits (291), Expect = 8e-27
Identities = 53/68 (77%), Positives = 62/68 (90%)
Frame = +1
Query: 235 KFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQALAGKPGGPPKIRITGFDDST 294
KFGYMSANG IAEA+K+E E+HIIDFQI+QG QW+SLIQALA +PGGPPK+RITG DD+
Sbjct: 4 KFGYMSANGAIAEAMKEEREVHIIDFQISQGTQWVSLIQALAHRPGGPPKVRITGVDDTF 183
Query: 295 SAYARGGG 302
S+YARGGG
Sbjct: 184 SSYARGGG 207
>BF177544
Length = 318
Score = 114 bits (285), Expect = 4e-26
Identities = 56/95 (58%), Positives = 70/95 (72%)
Frame = +3
Query: 338 LELRRGEAIAVNFAMMLHHVPDEDVHGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELP 397
L R GEA+ VNFA LHH+PDE V N RD+L+RL K L+PK+VT+VEQ+ NTN P
Sbjct: 36 LSCRPGEALVVNFAFQLHHMPDESV-STVNERDQLLRLVKSLNPKLVTVVEQDVNTNTAP 212
Query: 398 FFARFVETMNYYFAVFESIDVALPREHRERINVEQ 432
F RFVE YY AVFES+D+ LPRE ++R+NVE+
Sbjct: 213 FLQRFVEAYKYYSAVFESLDITLPRESQDRMNVER 317
>TC16678 similar to UP|Q8GVE2 (Q8GVE2) Chitin-inducible
gibberellin-responsive protein, partial (14%)
Length = 740
Score = 110 bits (275), Expect = 6e-25
Identities = 51/80 (63%), Positives = 62/80 (76%)
Frame = +3
Query: 438 EVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLENYQGHYTLQE 497
+VVN++ACEG ERVERHE+ KW+S TMAGF PLSSY+N I+NLL Y HYTL E
Sbjct: 3 DVVNVIACEGKERVERHELFGKWKSRLTMAGFRQSPLSSYVNSVIKNLLRCYSEHYTLIE 182
Query: 498 KDGALYLGWMNQPLITSSAW 517
KDGA+ LGW N+ LI++SAW
Sbjct: 183 KDGAMLLGWKNRSLISASAW 242
>BP085370
Length = 381
Score = 93.2 bits (230), Expect(2) = 3e-24
Identities = 53/98 (54%), Positives = 70/98 (71%)
Frame = -2
Query: 32 HSTYPSFQALEQNLESSNNSPVSKLQSKSYTFTSQNSLEIINDSLENESCLTHNQDDLWH 91
++++P + + S NSPVSKL SKS S++SLEIINDSLEN+SC+THN ++L
Sbjct: 380 NNSFPGQNSPSTVIFSPENSPVSKLNSKSDVLRSEHSLEIINDSLENDSCVTHNHNELSL 201
Query: 92 KIRELENAMLGQDAADMLDIYNDTVIIQQESDPLLLEA 129
KIRELE AMLG D AD+LDIY D+VI ++ +LEA
Sbjct: 200 KIRELEIAMLGHD-ADVLDIY-DSVIPEEYDSSFMLEA 93
Score = 35.8 bits (81), Expect(2) = 3e-24
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = -1
Query: 125 LLLEAEKWNKMIEMISRGDLKEILFTCAK 153
+ + E M+EM++RGDLKE+L TCAK
Sbjct: 108 IYVRGENLKTMMEMVARGDLKEMLCTCAK 22
>TC11080 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin response
modulator, partial (33%)
Length = 556
Score = 106 bits (265), Expect = 8e-24
Identities = 64/196 (32%), Positives = 107/196 (53%), Gaps = 1/196 (0%)
Frame = +2
Query: 155 ISENDMETAEWLMSELSKMVSVSGNPIQRLGAYMLEALVARIASSGSIIYKSLKCKEPIT 214
+ + + + A+ L+ + + + ++++ +Y +AL RI + +
Sbjct: 2 VQKENHKLADTLVKHIGVVAASQAGAMRKVASYFAQALARRIYGI---------FPDTVD 154
Query: 215 ATSKELLSHMHVLYEICPYLKFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQA 274
++ ++L HMH YE CPYLKF + +AN I EA +H++DF + QG+QW +L+QA
Sbjct: 155 SSLHDVL-HMH-FYESCPYLKFAHFTANQAILEAFATAGRVHVVDFGLKQGMQWPALMQA 328
Query: 275 LAGKPGGPPKIRITGFDDSTSAYARGGGLGIVGERLSKLAESYNVAFEFHA-IGVSPSEV 333
LA +PGGPP R+TG L VG +L++LA++ V FEF + S +++
Sbjct: 329 LALRPGGPPTFRLTGIGPPQP--DNSDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADL 502
Query: 334 RLEDLELRRGEAIAVN 349
LE+R GEA+AVN
Sbjct: 503 DPNMLEIRPGEAVAVN 550
>AV770800
Length = 514
Score = 87.8 bits (216), Expect = 4e-18
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = -1
Query: 392 NTNELPFFARFVETMNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERV 451
N NE RF E ++YY VF+S++ P E + + + L RE+ N+V CEG RV
Sbjct: 514 NHNEDGLLERFTEALHYYSTVFDSLE-GCPVEPDKAL--AEMYLQREICNVVCCEGTARV 344
Query: 452 ERHEVLKKWRSCFTMAGFTPYPLSS--YINYSIQNLLENYQGHYTLQEKDGALYLGWMNQ 509
ERHE L KWR AGF P L S + S+ L + +G Y ++EK+G L LGW ++
Sbjct: 343 ERHEPLAKWRERLGKAGFRPVHLGSDAFTQASMLFTLFSSEG-YCVEEKEGCLTLGWHSR 167
Query: 510 PLITSSAWR 518
P + +SAW+
Sbjct: 166 PPLAASAWQ 140
>BP077395
Length = 397
Score = 79.0 bits (193), Expect = 2e-15
Identities = 35/73 (47%), Positives = 52/73 (70%)
Frame = -3
Query: 446 EGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLENYQGHYTLQEKDGALYLG 505
EG +R+ER+EV KWR+ TMAGFTP P+S+ + I+ L++ Y Y ++E+ GAL+ G
Sbjct: 395 EGEDRIERYEVAGKWRARMTMAGFTPSPMSANVGDEIRKLIKLYCDRYKIKEEMGALHFG 216
Query: 506 WMNQPLITSSAWR 518
W ++ LI +SAWR
Sbjct: 215 WEDKNLIVASAWR 177
>TC17852 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, partial
(26%)
Length = 456
Score = 76.6 bits (187), Expect = 9e-15
Identities = 50/146 (34%), Positives = 76/146 (51%), Gaps = 2/146 (1%)
Frame = +2
Query: 346 IAVNFAMMLHHVPDEDVHGGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVET 405
+AVNF + L+++ DE + +RLAK L P++VTL E E++ + F +RF
Sbjct: 2 LAVNFMLQLYNLLDET----PTAVETALRLAKSLKPRIVTLGEYEASLTRVGFVSRFKAA 169
Query: 406 MNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACE--GAERVERHEVLKKWRSC 463
+ ++ A+FES++ LP + ER VE L R + ++ E G R ER E ++WR
Sbjct: 170 LKHFSALFESLEPNLPSDSPERFQVESLLLGRRIAGVIGPELPGCVR-ERMEDKEQWRVL 346
Query: 464 FTMAGFTPYPLSSYINYSIQNLLENY 489
GF LS Y + LL NY
Sbjct: 347 MESCGFESVSLSHYAISQAKILLWNY 424
>TC14505 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial (16%)
Length = 670
Score = 76.3 bits (186), Expect = 1e-14
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 435 LAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLENYQG--H 492
L ++ N+VACEG +RVERHE L +WR+ AGF P L S LL + G
Sbjct: 64 LGEQICNVVACEGVDRVERHETLVQWRTRMGSAGFNPVHLGSNAFKQASMLLALFAGGDG 243
Query: 493 YTLQEKDGALYLGWMNQPLITSSAWR 518
Y ++E +G L LGW +PLI +SAW+
Sbjct: 244 YRVEENNGCLMLGWHTRPLIATSAWK 321
>AV418844
Length = 284
Score = 69.3 bits (168), Expect = 1e-12
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +1
Query: 250 KDESEIHIIDFQINQGIQWMSLIQALAGKPGGPPKIRITGFDDSTSAYARGGGLGIVGER 309
K+ES +HIIDF I G QW LI++L+ + GGPP++R+TG + + + G R
Sbjct: 1 KNESSVHIIDFGICYGFQWPCLIKSLSERHGGPPRLRVTGIELPRPGFRPAERVEETGRR 180
Query: 310 LSKLAESYNVAFEFHAIGVSPSEVRLEDLE 339
L + + V FE++ + ++LEDL+
Sbjct: 181 LENYCKKFKVPFEYNCLAKKWETIKLEDLK 270
>TC16184
Length = 702
Score = 68.6 bits (166), Expect = 2e-12
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 411 AVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFT 470
A F+ D + R+++ R +E+ + RE +N++ACEG ERVER E K+W+ T AGF
Sbjct: 1 ATFDMFDXVISRDNQWRRLIERESVGREAMNVIACEGLERVERPETYKRWQVRNTRAGFK 180
Query: 471 PYPLSSYINYSIQNLLEN-YQGHYTLQEKDGALYLGWMNQPLITSSAW 517
PL+ + + L+ Y + E + + GW + + S+ W
Sbjct: 181 QLPLNEGLMDKFRTKLKKWYHKDFVFDEDNNWMLQGWKGRIMYASTCW 324
>AV408567
Length = 401
Score = 60.5 bits (145), Expect = 7e-10
Identities = 26/44 (59%), Positives = 33/44 (74%)
Frame = -1
Query: 475 SSYINYSIQNLLENYQGHYTLQEKDGALYLGWMNQPLITSSAWR 518
SS +N +I+ LLENY Y L E+DGALYLGWMN+ L+ S AW+
Sbjct: 401 SSLVNGTIKKLLENYSDRYRLVERDGALYLGWMNRDLVASCAWK 270
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,792,752
Number of Sequences: 28460
Number of extensions: 111587
Number of successful extensions: 603
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of query: 518
length of database: 4,897,600
effective HSP length: 94
effective length of query: 424
effective length of database: 2,222,360
effective search space: 942280640
effective search space used: 942280640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC137079.8