TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136954.8 + phase: 0 
         (482 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC11614 similar to UP|Q9FHH4 (Q9FHH4) Diacylglycerol kinase-like...   236  6e-63
AV776958                                                               87  8e-18
AV422775                                                               41  5e-04
AV410272                                                               37  0.005
TC12920                                                                29  1.5
TC11642 similar to UP|Q9FHL3 (Q9FHL3) Genomic DNA, chromosome 5,...    28  2.5
TC10311 similar to UP|Q9FIJ6 (Q9FIJ6) Receptor kinase-like prote...    28  4.3
CB828601                                                               27  9.7
BP071212                                                               27  9.7

>TC11614 similar to UP|Q9FHH4 (Q9FHH4) Diacylglycerol kinase-like protein,
           partial (24%)
          Length = 634

 Score =  236 bits (602), Expect = 6e-63
 Identities = 111/125 (88%), Positives = 119/125 (94%)
 Frame = +3

Query: 357 VAIPKSVRAIVALNLHSYGSGRNPWGKPKPEYLEKKGFVEADVADGRLEIFGLKQGWHAS 416
           +A+PKSVRAIVALNLHSYGSGRNPWGKPKPEYLEKKGFVEADVADG LEIFGLK  WHAS
Sbjct: 3   IAVPKSVRAIVALNLHSYGSGRNPWGKPKPEYLEKKGFVEADVADGLLEIFGLKPAWHAS 182

Query: 417 FVMVDLITAKHIAQAAAIRLELRGGGWKNAYLQMDGEPWKQPLSKDFSTFVEIKREPFQS 476
           FVMV+LI+AKH+AQA+AIR ELRGGGWKNAY+QMDGEPWKQPLSKDFSTFVEIKRE FQS
Sbjct: 183 FVMVELISAKHLAQASAIRFELRGGGWKNAYMQMDGEPWKQPLSKDFSTFVEIKREHFQS 362

Query: 477 LVVDG 481
           LV+ G
Sbjct: 363 LVISG 377


>AV776958 
          Length = 400

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 4   SPSSTTEDSKKIQVRSSLVESIRGCGLSGMRIDKEDLKKQLTLPQYLRFAMRDSIR 59
           +P++TT D  KI VR+S+VES+ GCGLSGMRIDKEDLKK+LT+P YLR AMRDSIR
Sbjct: 233 TPTATTGDRNKIAVRTSIVESLSGCGLSGMRIDKEDLKKKLTMPPYLRLAMRDSIR 400


>AV422775 
          Length = 414

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 20/45 (44%), Positives = 27/45 (59%)
 Frame = +2

Query: 79  SAAPTSPMVVFINARSGGRHGPALKERLQQLMSEEQVFDLADVKP 123
           S  PT P++VFIN +SGG+ G  L      L+++ QVFDL    P
Sbjct: 269 SHVPTCPVIVFINTKSGGQLGGELLVTYSTLLNKNQVFDLGVKAP 403


>AV410272 
          Length = 427

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
 Frame = +1

Query: 148 TREKLR-----VMVAGGDGTVGWVLG--------CLTELRQLGREPVPPVGIVPLGTGND 194
           TRE +R     V+  GGDGT+  V+            ++++  R     +G++PLGTG+D
Sbjct: 148 TREAIREGADAVIAVGGDGTLHEVVNGFFWGGKPVTCQMKESTRSTA--LGLIPLGTGSD 321

Query: 195 LSRSFNWGGSFPFAWKSAIKRTLQKASVGSVHRLD 229
            +R+        F WK+  +  +++ + G   R+D
Sbjct: 322 FART--------FGWKNDPREAIERVARGLRSRID 402


>TC12920 
          Length = 428

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +3

Query: 449 QMDGEPWKQPLSKDFST-FVEI 469
           ++DGEPWKQPL  D  T  VEI
Sbjct: 3   RIDGEPWKQPLPVDDDTVLVEI 68


>TC11642 similar to UP|Q9FHL3 (Q9FHL3) Genomic DNA, chromosome 5, TAC
           clone:K19M13, partial (48%)
          Length = 1127

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 154 VMVAGGDGTVGWVLGCLTELRQLGREPVP-PVGIVPLGTGNDL 195
           ++  GGDG +  VL  L   R   +E +  P+GI+P G+ N L
Sbjct: 24  IICVGGDGIINEVLNGLLS-RDNQKEGISIPIGIIPAGSDNSL 149


>TC10311 similar to UP|Q9FIJ6 (Q9FIJ6) Receptor kinase-like protein, partial
           (5%)
          Length = 588

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = -1

Query: 206 PFAWKSAIKRTLQKASVGSVHRLDSWRLSISMPESTTVKPPYCLKQAEEFTL 257
           P +WK   +  L    + S+  L  W+L +  P         C+++ E  ++
Sbjct: 399 PCSWKKRDRSFLPATLLSSLRPLSQWQLRLGFPSELLKSMAACVREVERTSM 244


>CB828601 
          Length = 333

 Score = 26.6 bits (57), Expect = 9.7
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = -1

Query: 318 YSCTQGWFFTPCTSDPGLRGLRNILRMHIKRVSSSEWEQVAIPKSVRAIVA--LNLHSYG 375
           Y+   GW  T C      RG R +LR +++R S           SV  +VA  LN     
Sbjct: 279 YNLRAGWIRTQCGGLRRWRGRRRMLRRYLRRRSGRACSWAG---SVHTLVAPWLNQGVQN 109

Query: 376 SGR-NPWG--KPKPEY 388
             R N WG   P P +
Sbjct: 108 HYRGNSWGD*NPNPNW 61


>BP071212 
          Length = 204

 Score = 26.6 bits (57), Expect = 9.7
 Identities = 15/51 (29%), Positives = 25/51 (48%), Gaps = 6/51 (11%)
 Frame = -3

Query: 271 VKSYEGVYYNYFSIGMDAQVAYG-----FHRLRDEKPYLAS-GPIANKIIY 315
           +K Y+G  YN   +G+D  V YG      +RL     Y    G + ++++Y
Sbjct: 154 LKGYDGCAYNLLKLGLDWIVNYGSWLGFLYRLSQIVTYCMK*GVVISRVLY 2


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,251,559
Number of Sequences: 28460
Number of extensions: 113245
Number of successful extensions: 513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of query: 482
length of database: 4,897,600
effective HSP length: 94
effective length of query: 388
effective length of database: 2,222,360
effective search space: 862275680
effective search space used: 862275680
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)