Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136841.9 + phase: 0 
         (341 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC10971 similar to UP|Q40318 (Q40318) Coil protein, partial (42%)     203  3e-53
AW720418                                                              200  3e-52
CN825151                                                              197  3e-51
TC10972 similar to UP|Q40318 (Q40318) Coil protein, partial (32%)     170  4e-43
TC12415 similar to UP|Q9LII9 (Q9LII9) Genomic DNA, chromosome 3,...   119  1e-27
AV765573                                                              111  2e-25
BP059660                                                              103  3e-23
TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fra...    97  5e-21
BG662148                                                               92  2e-19
TC13503 similar to UP|Q8W0Y7 (Q8W0Y7) Enod8.3 (Fragment), partia...    73  6e-14
BG662032                                                               73  8e-14
CB827193                                                               67  6e-12
TC11166 weakly similar to UP|Q9FXJ3 (Q9FXJ3) F1K23.17, partial (...    64  5e-11
BI420239                                                               59  9e-10
TC11763                                                                58  3e-09
TC18753                                                                54  3e-08
AV773399                                                               54  5e-08
BI419094                                                               52  1e-07
BP058564                                                               51  3e-07
AW720472                                                               50  7e-07

>TC10971 similar to UP|Q40318 (Q40318) Coil protein, partial (42%)
          Length = 615

 Score =  203 bits (517), Expect = 3e-53
 Identities = 116/231 (50%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
 Frame = +2

Query: 1   MNTMTLIYILCFFNLCVACPSKKCVYPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGS 60
           MN+ TLI+ L  F LCVAC                             ++ P+G      
Sbjct: 41  MNSRTLIHALWCFALCVAC---------------------------TFIQIPSG------ 121

Query: 61  ISGRCCDGRLILDFISEELELPYLSSYLNSVGSNYRHGANFAVASAPIRPIIA-GLTYLG 119
                 +GRLI+DFI+EELE+PYLS+YLNS+GSNYRHGANFA   A IRP+      YLG
Sbjct: 122 ------NGRLIIDFITEELEIPYLSAYLNSIGSNYRHGANFAAGGASIRPVYGFSPFYLG 283

Query: 120 FQVSQFILFKSHTKILFDQ----RTEPPLRSGVPRTEDFSKAIYTIDIGQNDIGYGLQKP 175
            QV+QFI  +SH + L +Q    RTEPP +S +PR EDFSKA+YTIDIGQND+G+GL   
Sbjct: 284 MQVAQFIQLQSHIENLLNQFSSNRTEPPFKSYLPRPEDFSKALYTIDIGQNDLGFGLM-- 457

Query: 176 NSSEEEVRRSIPDILSQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFY 226
           ++SEEEV RSIP+++  FT  VQ LY+  ARVFWIHNT PI C+P    FY
Sbjct: 458 HTSEEEVLRSIPEMMRNFTYDVQVLYDVGARVFWIHNTCPIGCLPTSSIFY 610


>AW720418 
          Length = 500

 Score =  200 bits (508), Expect = 3e-52
 Identities = 103/170 (60%), Positives = 126/170 (73%)
 Frame = +3

Query: 128 FKSHTKILFDQRTEPPLRSGVPRTEDFSKAIYTIDIGQNDIGYGLQKPNSSEEEVRRSIP 187
           FK  T+ILF+  T     S +PR EDFS+A+Y  DIGQND+ YG Q   SSEE++R S+P
Sbjct: 3   FKLRTQILFNG-TV*IFXSSIPRXEDFSRALYMFDIGQNDLSYGFQY--SSEEQLRASLP 173

Query: 188 DILSQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFYPHKNEKGNLDANGCVKPHNEL 247
           +ILSQF+QAV++LY E ARVFWIHNTGPI C+P  +  Y  K++KGN+DANGCV   N +
Sbjct: 174 NILSQFSQAVEQLYXEGARVFWIHNTGPIGCLPLNFLAYG-KSKKGNVDANGCVISQNGI 350

Query: 248 AQEYNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNPLE 297
           A E+N QLK+QV QLR+  PLAK  YVDVY  KY L+SNAR  GFVNPLE
Sbjct: 351 AHEFNLQLKNQVLQLRKKLPLAKLIYVDVYKAKYELVSNARKLGFVNPLE 500


>CN825151 
          Length = 740

 Score =  197 bits (500), Expect = 3e-51
 Identities = 111/240 (46%), Positives = 139/240 (57%), Gaps = 14/240 (5%)
 Frame = +1

Query: 10  LCFFNLCVACP-------SKKCVYPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGSIS 62
           + FF  C  C        S  C +PAIYNFGDSNSDTG   A    +  P G SF    S
Sbjct: 28  IAFFLSCTLCVNSVELKNSPPCAFPAIYNFGDSNSDTGGISAAFEPIPPPYGESFPQKPS 207

Query: 63  GRCCDGRLILDFISEELELPYLSSYLNSVGSNYRHGANFAVASAPIRPIIAGLTYLG--- 119
            R CDGRLI+DFI+E+L LPYLS+YLNS+G+NYRHGANFA   + IR     +   G   
Sbjct: 208 ARDCDGRLIVDFIAEKLNLPYLSAYLNSLGTNYRHGANFATGGSTIRRQNETIFQYGISP 387

Query: 120 ----FQVSQFILFKSHTKILFDQRTEPPLRSGVPRTEDFSKAIYTIDIGQNDIGYGLQKP 175
                Q  QF  FK+ TK L+ +      RS +P  E+FSKA+YT DIGQND+  G +  
Sbjct: 388 FSLDMQFVQFKQFKARTKQLYQEAKTALERSKLPVPEEFSKALYTFDIGQNDLSVGFRMM 567

Query: 176 NSSEEEVRRSIPDILSQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFYPHKNEKGNL 235
           N   +++R S+PDI++Q   AV+ +Y    R FWIHNT PI C+P    FY H    G L
Sbjct: 568 NF--DQMRESMPDIVNQLASAVKNIYELGGRTFWIHNTAPIGCLP-VNLFYKHNLPAGYL 738


>TC10972 similar to UP|Q40318 (Q40318) Coil protein, partial (32%)
          Length = 548

 Score =  170 bits (430), Expect = 4e-43
 Identities = 87/149 (58%), Positives = 104/149 (69%), Gaps = 14/149 (9%)
 Frame = +1

Query: 1   MNTMTLIYILCFFNLCVACP-------------SKKCVYPAIYNFGDSNSDTGAGYATMA 47
           MN+ TLI+ L  F LCVAC              S KC YPA+YNFGDSNS+TG  YA  A
Sbjct: 100 MNSRTLIHALWCFALCVACTFIQIPSGNGSYSSSSKCSYPAVYNFGDSNSNTGVVYAAFA 279

Query: 48  AVEHPNGISFFGSISGRCCDGRLILDFISEELELPYLSSYLNSVGSNYRHGANFAVASAP 107
            ++ P GISFFG++SGR  DGRLI+DFI+EELE+PYLS+YLNS+GSNYRHGANFA   A 
Sbjct: 280 GLQSPGGISFFGNLSGRASDGRLIIDFITEELEIPYLSAYLNSIGSNYRHGANFAAGGAS 459

Query: 108 IRPIIA-GLTYLGFQVSQFILFKSHTKIL 135
           IRP+      YLG QV+QFI  +SH + L
Sbjct: 460 IRPVYGFSPFYLGMQVAQFIQLQSHIENL 546


>TC12415 similar to UP|Q9LII9 (Q9LII9) Genomic DNA, chromosome 3, TAC
           clone:K24A2, partial (22%)
          Length = 366

 Score =  119 bits (297), Expect = 1e-27
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = +3

Query: 26  YPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGSISGRCCDGRLILDFISEELELPYLS 85
           YPAI+NFGDSNSDTGA  A    V  PNG +F G++SGR  DGRLI+DFI+EEL+LPYL 
Sbjct: 78  YPAIFNFGDSNSDTGAISAAFTIVHPPNGQNFLGALSGRYSDGRLIIDFITEELKLPYLD 257

Query: 86  SYLNSVGSNYRHGANFAVASAPI 108
           +YLNSVG+NYRHGANFA   + I
Sbjct: 258 AYLNSVGANYRHGANFATGGSSI 326


>AV765573 
          Length = 440

 Score =  111 bits (277), Expect = 2e-25
 Identities = 61/121 (50%), Positives = 75/121 (61%), Gaps = 12/121 (9%)
 Frame = +2

Query: 18  ACPSKKCVYPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGSISGRCCDGRLILDFISE 77
           A  +K C +PAI+NFG SNSDTG   A       P G ++FG  +GR  DGR+ILDFI++
Sbjct: 83  ATTTKTCDFPAIFNFGASNSDTGGFAAAFLQPGPPQGDTYFGRPAGRFSDGRIILDFIAQ 262

Query: 78  ELELPYLSSYLNSVGSNYRHGANFAVASAPIR------------PIIAGLTYLGFQVSQF 125
             ELPYLS+YLNS+G+NY HGA+FA  S+ IR            P   GL YL FQ  QF
Sbjct: 263 NFELPYLSAYLNSLGANYSHGASFATLSSTIRLPESVVPNGRSSPFFLGLQYLQFQ--QF 436

Query: 126 I 126
           I
Sbjct: 437 I 439


>BP059660 
          Length = 501

 Score =  103 bits (258), Expect = 3e-23
 Identities = 51/74 (68%), Positives = 55/74 (73%)
 Frame = -3

Query: 260 FQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNPLEFCCGSYQGNEIHYCGKKSIKNG 319
           FQLRR  P AKFTYVDVYT KY LISNA  QGFVNPLE CCGSY G  I  CGKK++ NG
Sbjct: 499 FQLRRNLPKAKFTYVDVYTAKYELISNASKQGFVNPLEVCCGSYYGYRID-CGKKAVVNG 323

Query: 320 TVYGIACDDSSTYI 333
           TVYG  C + S +I
Sbjct: 322 TVYGNPCKNPSQHI 281


>TC11748 weakly similar to UP|O82076 (O82076) Lipase homolog (Fragment),
           partial (48%)
          Length = 679

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 53/148 (35%), Positives = 77/148 (51%), Gaps = 5/148 (3%)
 Frame = +3

Query: 191 SQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFYPHKNEKGNLDANGCVKPHNELAQE 250
           ++   AV+ LYNE AR FW+HNTGP+ C+P          +K +LD  GC+  +N  A+ 
Sbjct: 3   TEIENAVKSLYNEGARKFWVHNTGPLGCLPKILALA----QKKDLDLFGCLSSYNSAARL 170

Query: 251 YNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNPLEFCCGSYQGNEIHY 310
           +N  L     +LR     A   YVD+Y +K+ LI+NA   GF NPL  CCG + G   ++
Sbjct: 171 FNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLIANATKYGFSNPLTVCCG-FGGPPYNF 347

Query: 311 -----CGKKSIKNGTVYGIACDDSSTYI 333
                CG+   +        CD+ S Y+
Sbjct: 348 DLRVTCGQPGYQ-------VCDEGSRYV 410


>BG662148 
          Length = 415

 Score = 91.7 bits (226), Expect = 2e-19
 Identities = 43/85 (50%), Positives = 59/85 (68%)
 Frame = +2

Query: 24  CVYPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGSISGRCCDGRLILDFISEELELPY 83
           C +PAI+NFG SNSDTG   A     + P+G ++F   +GR  DGR+I+DFI++   L Y
Sbjct: 104 CDFPAIFNFGASNSDTGGYAAAFEGPKPPHGDTYFHRPAGRYSDGRIIIDFIAQSFGLTY 283

Query: 84  LSSYLNSVGSNYRHGANFAVASAPI 108
           LS+YL+S+GSN+ HGANFA   + I
Sbjct: 284 LSAYLDSLGSNFSHGANFATLGSTI 358


>TC13503 similar to UP|Q8W0Y7 (Q8W0Y7) Enod8.3 (Fragment), partial (30%)
          Length = 705

 Score = 73.2 bits (178), Expect = 6e-14
 Identities = 39/106 (36%), Positives = 58/106 (53%)
 Frame = -2

Query: 189 ILSQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFYPHKNEKGNLDANGCVKPHNELA 248
           +L++    ++ +Y+  AR F IHNT PI C+P     +P    K   D  GC   +NE+A
Sbjct: 416 VLNE*NMVIKLIYDLRARSFGIHNT*PIGCLPAILTNFP----KAERDHYGCAT*YNEVA 249

Query: 249 QEYNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVN 294
           + +N++LK+ + QLRR  PLA   YVD+Y+ K     N    G  N
Sbjct: 248 KYFNQKLKEALAQLRRELPLAAIIYVDIYSPKLDHFRNLEKYGETN 111


>BG662032 
          Length = 421

 Score = 72.8 bits (177), Expect = 8e-14
 Identities = 42/112 (37%), Positives = 56/112 (49%)
 Frame = +1

Query: 191 SQFTQAVQKLYNEEARVFWIHNTGPIECIPYYYFFYPHKNEKGNLDANGCVKPHNELAQE 250
           S F   + +LY  +AR F I N GPI CIPY       +     L+ N CV   N+LA +
Sbjct: 13  SHFRAQLTRLYRLDARKFVIGNVGPIGCIPY-------QKTINQLNENECVDLPNKLALQ 171

Query: 251 YNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNPLEFCCGS 302
           YN +LKD + +L    P A F   +VY +   LI N    GF    + CCG+
Sbjct: 172 YNARLKDLMAELNDNLPGATFVVANVYDLVMELIKNYDKYGFTTSTKACCGN 327


>CB827193 
          Length = 528

 Score = 66.6 bits (161), Expect = 6e-12
 Identities = 38/94 (40%), Positives = 52/94 (54%), Gaps = 11/94 (11%)
 Frame = +1

Query: 24  CVYPAIYNFGDSNSDTGAGYATMAAVEH-----PNGISFFGSISGRCCDGRLILDFISEE 78
           C + +I++FGDS +DTG  Y + A   H     P G ++F   S RC DGR+I+D+I+E 
Sbjct: 67  CSFSSIFSFGDSLADTGNLYLSSALPSHHCFFPPYGRTYFHRPSARCSDGRIIIDYIAES 246

Query: 79  LELPYLSSYL------NSVGSNYRHGANFAVASA 106
           L LP++  YL           N   GANFAV  A
Sbjct: 247 LGLPFVKPYLEIKKHGGLENFNVEGGANFAVIGA 348


>TC11166 weakly similar to UP|Q9FXJ3 (Q9FXJ3) F1K23.17, partial (15%)
          Length = 495

 Score = 63.5 bits (153), Expect = 5e-11
 Identities = 39/101 (38%), Positives = 49/101 (47%), Gaps = 3/101 (2%)
 Frame = +2

Query: 236 DANGCVKPHNELAQEYNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNP 295
           D  GCVK  NE A+ YN++L+ ++ +LR + P A   Y D Y     L  N +  GF   
Sbjct: 2   DQAGCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF-RG 178

Query: 296 LEFCC---GSYQGNEIHYCGKKSIKNGTVYGIACDDSSTYI 333
           LE CC   G Y  N    CG   +       IACDD S YI
Sbjct: 179 LEICCGMGGPYNYNASAGCGSPGV-------IACDDPSEYI 280


>BI420239 
          Length = 621

 Score = 59.3 bits (142), Expect = 9e-10
 Identities = 58/208 (27%), Positives = 96/208 (45%), Gaps = 9/208 (4%)
 Frame = +1

Query: 4   MTLIYILCFFNLCVACPSKKCVYPAIYNFGDSNSDTG--AGYATMAAVEH-PNGISFFGS 60
           + L+ +L    +   C  +    P ++ FGDS SD+G      T A V++ P GI F   
Sbjct: 16  LALVILLVAIAIRQYCLQRNSQVPCLFIFGDSLSDSGNNNNLETDAKVDYLPYGIDFPTG 195

Query: 61  ISGRCCDGRLILDFISEELEL-PYLSSYLNSVGSNYRHGANFAVASAPIRPIIAGLTYLG 119
            +GR  +GR  +D I+E L L  ++  + N  GS+   G N+A  SA IR      T LG
Sbjct: 196 PTGRYTNGRNAIDKITELLGLEDFIPPFANLSGSDILKGVNYASGSAGIRK--ESGTNLG 369

Query: 120 FQVSQFILFKSHTKILFDQRTEPPLRSGVPRTE-DFSKAIYTIDIGQNDIGYGLQKPN-- 176
             ++  +    H  I+    ++   R G  + +   SK +Y ++IG ND       P+  
Sbjct: 370 TNINMGLQIYFHMAIV----SQISARLGFHKAKRHLSKCLYYVNIGTNDYEQNYFLPDLF 537

Query: 177 --SSEEEVRRSIPDILSQFTQAVQKLYN 202
             SS+        D++++ +  +Q L N
Sbjct: 538 DTSSKYTPEEYAKDLINRLSHYLQILRN 621


>TC11763 
          Length = 469

 Score = 57.8 bits (138), Expect = 3e-09
 Identities = 29/88 (32%), Positives = 48/88 (53%)
 Frame = +3

Query: 21  SKKCVYPAIYNFGDSNSDTGAGYATMAAVEHPNGISFFGSISGRCCDGRLILDFISEELE 80
           +K  +   ++ FGDS  DTG  +    + + P+GI+F G  +GR CDGR++ D+++  L+
Sbjct: 168 NKNSIVKKLFVFGDSYVDTG-NFVNSGSYKPPSGITFPGKPAGRFCDGRVLTDYVASYLK 344

Query: 81  LPYLSSYLNSVGSNYRHGANFAVASAPI 108
           +   + Y     S  +HG NFA     I
Sbjct: 345 IENPTPYTLRNSSKLQHGINFAYGGTGI 428


>TC18753 
          Length = 562

 Score = 54.3 bits (129), Expect = 3e-08
 Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
 Frame = +3

Query: 4   MTLIYILCFFNLCVACPSKKCVYPAIYNFGDSNSDTGAG--YATMAAVEH-PNGISFFGS 60
           + L+ I+C ++        +   P  ++FGDS  D G     +++A   + P GI F G 
Sbjct: 57  IVLVLIVCLWSTTTTGVGAEPQVPCFFSFGDSLVDNGNNNRLSSLAKANYRPYGIDFPGG 236

Query: 61  ISGRCCDGRLILDFISEELEL-PYLSSYLNSVGSNYRHGANFAVASAPIRPIIAGLTYLG 119
            +GR  +G+  +D I E L    Y+  Y  + G +   G N+A A+A IR         G
Sbjct: 237 PTGRFSNGKTSVDVIGELLGFGSYIPPYATTRGQDILRGVNYASAAAGIR------EETG 398

Query: 120 FQVSQFILFKSHTKILFDQRTEPPLRS--GVPRT--EDFSKAIYTIDIGQND 167
            Q+   I F+   +    QRT   L +  G   T     SK IY+I IG ND
Sbjct: 399 QQLGGRISFRGQVQNY--QRTVSQLINLLGDENTAANYLSKCIYSIGIGSND 548


>AV773399 
          Length = 492

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
 Frame = -1

Query: 262 LRRMFPLAKFTYVDVYTVKYTLISNARNQGFVNPLEFCCGSYQGNEIHY-----CGKKSI 316
           LR+    A  TYVDVY+VKY+LIS A+   F  PL  CCG   G + +Y     CG K  
Sbjct: 492 LRKKLHSASITYVDVYSVKYSLISQAKTHAFGEPLRACCG--HGGKYNYYIHIGCGAKLK 319

Query: 317 KNG--TVYGIACDDSS 330
            +G   + G  C+D S
Sbjct: 318 VHGQEILLGKPCEDPS 271


>BI419094 
          Length = 585

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 34/119 (28%), Positives = 51/119 (42%)
 Frame = +3

Query: 215 PIECIPYYYFFYPHKNEKGNLDANGCVKPHNELAQEYNRQLKDQVFQLRRMFPLAKFTYV 274
           P+ C+P     + H       D+N CV   N  A  +NR+L      L++  P  K   +
Sbjct: 15  PVGCLPAAITLFGH-------DSNQCVARLNNDAVNFNRKLNTTSQSLQKSLPGLKLVLL 173

Query: 275 DVYTVKYTLISNARNQGFVNPLEFCCGSYQGNEIHYCGKKSIKNGTVYGIACDDSSTYI 333
           D+Y   Y L++     GF      CCG+        C +KSI  GT     C ++S Y+
Sbjct: 174 DIYQPLYDLVTKPSENGFAEARRACCGTGLLETSILCNQKSI--GT-----CANASEYV 329


>BP058564 
          Length = 468

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
 Frame = -2

Query: 240 CVKPHNELAQEYNRQLKDQVFQLRRMFPLAKFTYVDVYTVKYTLISNARNQGF-VNPLEF 298
           C+K  N   + ++  L+ ++ QLR ++PL    Y D +     +  +  N GF  N L+ 
Sbjct: 467 CLKWLNMFHEHHDDLLQIELNQLRVLYPLTNIIYADFFNAALQIYKSPENFGFGGNALKV 288

Query: 299 CCGS---YQGNEIHYCGKKSIKNGTVYGIACDDSSTYI 333
           CCG    Y  N+   CG   +       IACDD S Y+
Sbjct: 287 CCGGGGPYNYNDTAVCGNSGV-------IACDDPSQYV 195


>AW720472 
          Length = 518

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 42/84 (49%), Gaps = 5/84 (5%)
 Frame = +2

Query: 28  AIYNFGDSNSDTGAG-YATMAAVEHPN----GISFFGSISGRCCDGRLILDFISEELELP 82
           A++ FGDS  D G   Y     ++  N    G ++F   +GR CDGRLI DFI+E   LP
Sbjct: 134 ALFIFGDSLLDAGNNNYINTTTLDQANFLPYGETYFKFPTGRFCDGRLISDFIAEYANLP 313

Query: 83  YLSSYLNSVGSNYRHGANFAVASA 106
            +  +     + +  G NFA   A
Sbjct: 314 LIPPFQQPGFTQFESGVNFASGGA 385


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.322    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,421,826
Number of Sequences: 28460
Number of extensions: 89930
Number of successful extensions: 570
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of query: 341
length of database: 4,897,600
effective HSP length: 91
effective length of query: 250
effective length of database: 2,307,740
effective search space: 576935000
effective search space used: 576935000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)


Medicago: description of AC136841.9