BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136141.8 - phase: 0
(339 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP054462 110 3e-25
BP046863 77 5e-15
TC19412 similar to UP|Q84KB0 (Q84KB0) Pol protein, partial (7%) 55 2e-08
TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial ... 36 0.008
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 36 0.008
AV769326 34 0.031
TC16159 homologue to UP|Q94A23 (Q94A23) AT5g64310/MSJ1_15, parti... 32 0.20
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 31 0.26
CB827746 31 0.26
TC17977 weakly similar to UP|Q9FXG6 (Q9FXG6) F6F9.27 protein, pa... 31 0.34
TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%) 31 0.34
TC13931 weakly similar to UP|BAC25162 (BAC25162) Adult male test... 30 0.58
TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II ... 30 0.58
TC15260 similar to GB|AAM63479.1|21554372|AY086477 phospholipase... 30 0.58
TC8136 similar to GB|AAB60729.1|2160166|F21M12 F21M12.13 {Arabid... 30 0.58
BI417928 30 0.58
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 30 0.58
TC12019 30 0.76
TC18949 similar to UP|Q8S8Z5 (Q8S8Z5) Syringolide-induced protei... 30 0.76
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 29 0.99
>BP054462
Length = 422
Score = 110 bits (275), Expect = 3e-25
Identities = 53/131 (40%), Positives = 85/131 (64%)
Frame = +1
Query: 1 MTPFEALYGRPPPSIRNYVRGHTTVLKLDTTLAHIEHILHTIKENLERSKQRMGTLANQK 60
M+PF+ALYGR PP + + + ++ + +L ++ NL +S+ M T AN+K
Sbjct: 28 MSPFQALYGREPPVLLQGTTIPSKIAAVNDLQVGRDELLSDLRANLLKSQDMMRTYANKK 207
Query: 61 RKDCTFVVGQLVWLRLQLYRQHTVHRRTSPKLAKRYYGPFLILRRIGPVAYELDLPPSSR 120
R+D + +G V+L+LQ YR+ ++ ++ + KL+ RYYGP+ I+ +IG VAY L+LP SR
Sbjct: 208 RRDVDYQIGDEVFLKLQPYRRRSLAKKMNEKLSPRYYGPYPIVAKIGAVAYRLELPAHSR 387
Query: 121 IHPVIHVSQLR 131
+HPV HVS L+
Sbjct: 388 VHPVFHVSLLK 420
>BP046863
Length = 580
Score = 76.6 bits (187), Expect = 5e-15
Identities = 38/95 (40%), Positives = 61/95 (64%)
Frame = +1
Query: 38 ILHTIKENLERSKQRMGTLANQKRKDCTFVVGQLVWLRLQLYRQHTVHRRTSPKLAKRYY 97
+L ++ NL +++ +M AN+ R+ + VG V+L+LQ Y+ + +R + KL+ R+Y
Sbjct: 295 LLLELRGNLLKAQDQMRAQANKHRRYVDYQVGNWVFLKLQPYKLQNLAQRKNQKLSPRFY 474
Query: 98 GPFLILRRIGPVAYELDLPPSSRIHPVIHVSQLRE 132
GPF +L R+ VAY LDL SR+HPV H+S L +
Sbjct: 475 GPFKVLERVVQVAY*LDLXSESRVHPVFHLSLLEK 579
>TC19412 similar to UP|Q84KB0 (Q84KB0) Pol protein, partial (7%)
Length = 519
Score = 54.7 bits (130), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (71%), Gaps = 1/44 (2%)
Frame = +3
Query: 91 KLAKRYYGPFLILRRIGPVAYELDLPPS-SRIHPVIHVSQLREY 133
KL+ R+ GPF +L R+G V+Y L LPP S +HPV HVS LR+Y
Sbjct: 48 KLSPRFIGPFEVLERVGSVSYRLALPPDLSAVHPVFHVSMLRKY 179
>TC18517 weakly similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (4%)
Length = 493
Score = 36.2 bits (82), Expect = 0.008
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 218 VPLDASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPA--SPKITPSFIQSPPSDPTTNH 275
V + + Q Q TT PP PI+ +P+ SP +TPS PPS +T
Sbjct: 80 VTVPSLQLQPHLPTTPSHAPPTPPISPRAAPGKNSSPSTPSPALTPS--AKPPSA*STTS 253
Query: 276 INGQHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDSS 314
TTP + S +PS + P+ SS P SS
Sbjct: 254 ATSSATTPWSSSSSSSSPS-SGTPSPSSSSSPSSSPGSS 367
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 36.2 bits (82), Expect = 0.008
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +1
Query: 230 STTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHINGQHTTPCQLTES 289
S +++ PP NP T+ Q +P SP +PS SPPS + T+P T+S
Sbjct: 214 SASEEPSPP-NPSTSTTQQP-KHSPTSPPASPS--PSPPSTKPPTAMASPSTSPLSATKS 381
Query: 290 H----RAPSHTEEHKP-NLEVKVSSGPDSS 314
H APS + P +K S P SS
Sbjct: 382 HPTPPAAPSASSTPPPTTTSLKTMSSPSSS 471
Score = 26.2 bits (56), Expect = 8.4
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +1
Query: 266 SPPSDPTTNHINGQHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDSS 314
SPP P+ + T+P T +P+ E+ P + P SS
Sbjct: 70 SPPPPPSQQPTHSPSTSPTSTTTPPPSPTKVTENPPTAPSTSTKSPTSS 216
>AV769326
Length = 262
Score = 34.3 bits (77), Expect = 0.031
Identities = 22/71 (30%), Positives = 31/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 223 SQPQDACSTTQDKYPPLNPITTVGNQ-TLTDAPASPKITPSFIQSPPSDPTTNHINGQHT 281
S P TT PP +P + N + P SP +T +Q PPS PT+ +
Sbjct: 50 SSPPSTTPTTPS--PPSDPHSPPSNPPSAASDPNSPSLTAPSLQKPPSSPTSTEPPSSSS 223
Query: 282 TPCQLTESHRA 292
TP + S R+
Sbjct: 224 TPSAPSASTRS 256
Score = 30.8 bits (68), Expect = 0.34
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 249 TLTDAPASPKITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPSHTEEHKPNLEVKVS 308
T T +P+SP T SPPSDP H+ P + P+ P+L+ K
Sbjct: 32 TTTSSPSSPPSTTPTTPSPPSDP--------HSPPSNPPSAASDPNSPSLTAPSLQ-KPP 184
Query: 309 SGPDSSD 315
S P S++
Sbjct: 185 SSPTSTE 205
>TC16159 homologue to UP|Q94A23 (Q94A23) AT5g64310/MSJ1_15, partial (19%)
Length = 605
Score = 31.6 bits (70), Expect = 0.20
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 222 ASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHING 278
A P + T + P +P T +DAPA +TPS I SPPS+ + NG
Sbjct: 209 AQTPAASPPTPVESGPSPSPATVNSPPASSDAPA---VTPSSISSPPSEAQSPSQNG 370
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 31.2 bits (69), Expect = 0.26
Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 16/138 (11%)
Frame = +1
Query: 193 PGIEKVNYSSTNVSSAVFKQGQMTLVPLDASQPQDACSTTQDKYPPLNPITT-------- 244
P +YS NV S P + P+ T+Q Y PL P T
Sbjct: 88 PKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPISQPPH 267
Query: 245 VGNQTLTDAPAS-------PKITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPSHTE 297
V T +P S P TPS PP PT + TP +++ P+ +
Sbjct: 268 VPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPN------TPSPISQPPYTPTPPK 429
Query: 298 EHKP-NLEVKVSSGPDSS 314
P N + S P+SS
Sbjct: 430 TPSPTNQPPHIPSPPNSS 483
Score = 28.1 bits (61), Expect = 2.2
Identities = 20/80 (25%), Positives = 30/80 (37%)
Frame = +1
Query: 219 PLDASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHING 278
P + P+ T+Q + P P T P PK TPS PP P+ + +
Sbjct: 310 PYTPTPPKTPSPTSQPPHTPTPPNTPSPISQPPYTPTPPK-TPSPTNQPPHIPSPPNSSS 486
Query: 279 QHTTPCQLTESHRAPSHTEE 298
+ P + PS T +
Sbjct: 487 PTSQPPNTPSPPKTPSPTSQ 546
>CB827746
Length = 550
Score = 31.2 bits (69), Expect = 0.26
Identities = 24/88 (27%), Positives = 38/88 (42%), Gaps = 1/88 (1%)
Frame = -1
Query: 106 IGPVAYELDLPPSSRIHPV-IHVSQLREYHGQDPDGHFRPIPPEVANNLFNESPENNHQD 164
I P+ LD PP S +HP+ IH+ + + + R I P+ N F N
Sbjct: 328 ISPIQSFLDGPPCSTLHPISIHLLRSNWFETE------RRISPKPINPNFEAKESGNGSG 167
Query: 165 TAEGRQEPETGKEGQEKEKVISQMREKE 192
E R G+ +E E+ + ++R E
Sbjct: 166 VCEIR----GGRRCREPERTVEEVRRIE 95
>TC17977 weakly similar to UP|Q9FXG6 (Q9FXG6) F6F9.27 protein, partial (18%)
Length = 720
Score = 30.8 bits (68), Expect = 0.34
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 216 TLVPLDASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNH 275
+L P+ P D + + D N T V NQ + PS +P +D ++NH
Sbjct: 393 SLTPISLKSPVDD-ALSSDLSMSSNFSTVVKNQAESPIHNLSFSIPSVFSTPTADLSSNH 569
Query: 276 INGQHTTPCQLTESHRAPSH 295
+H T +HR+P +
Sbjct: 570 DYHRHPTSTPTRWAHRSPGY 629
>TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%)
Length = 425
Score = 30.8 bits (68), Expect = 0.34
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +3
Query: 223 SQPQDACSTTQDKYPPLNPITTVGNQTLT--DAPAS--PKITPSFIQSPPSDPTTNHING 278
S P TT P P TT +T T + P + + P+ + +PPS T+H N
Sbjct: 39 SSPSTKAVTT---LTPPTPTTTTTAETTTKNNTPTTLLHQAAPAAL-TPPSTTLTHHHNN 206
Query: 279 QHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDSSDRILDSH 321
H LT HR +H + +S P S + SH
Sbjct: 207 NHPFTANLT-VHRHNNHPSTASLTVHHHLSQKPTCSTHLTTSH 332
>TC13931 weakly similar to UP|BAC25162 (BAC25162) Adult male testis cDNA,
RIKEN full-length enriched library, clone:1700094L18
product:protamine 1, full insert sequence, partial (47%)
Length = 392
Score = 30.0 bits (66), Expect = 0.58
Identities = 30/97 (30%), Positives = 38/97 (38%), Gaps = 10/97 (10%)
Frame = +1
Query: 222 ASQPQDACST-----TQDKYPPLN--PITTVGNQTLTDAPASPKITPS---FIQSPPSDP 271
+ QPQ+ ST T D Y PI N + P SP + PS SPP+ P
Sbjct: 61 SQQPQEEESTW*QVHTSDSYGDSISIPIVKP*NPSSPTLPTSPSLKPSPSAAPSSPPAAP 240
Query: 272 TTNHINGQHTTPCQLTESHRAPSHTEEHKPNLEVKVS 308
TT + TP L S P H P+ +S
Sbjct: 241 TTPSTSTISPTPPPLAPSTTTPP-PSLHSPSTPFPIS 348
>TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II , partial
(6%)
Length = 583
Score = 30.0 bits (66), Expect = 0.58
Identities = 31/120 (25%), Positives = 48/120 (39%), Gaps = 1/120 (0%)
Frame = -1
Query: 195 IEKVNYSSTNVSSAVFKQGQMTLV-PLDASQPQDACSTTQDKYPPLNPITTVGNQTLTDA 253
+ + + SS SS K+ T + P AS+P A PP++P T + T +
Sbjct: 460 VSRSSSSSAPPSSPGRKKSSETAIRPHSASEPDPAPPPPPPSSPPMSPSPTATSPP-TSS 284
Query: 254 PASPKITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDS 313
P + TP+ +P S P+ + +P T P +P E SS P S
Sbjct: 283 PNTHPPTPT--PNP*SSPSPSTTTASSASPSTKTLPSTRP------RPASESPTSSSPSS 128
>TC15260 similar to GB|AAM63479.1|21554372|AY086477 phospholipase-like
protein {Arabidopsis thaliana;}, partial (38%)
Length = 593
Score = 30.0 bits (66), Expect = 0.58
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = -1
Query: 220 LDASQPQDACSTTQDK----YPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNH 275
L A QP DA T QDK YP ++T +T P P+ P PP
Sbjct: 350 LVALQPTDA--TFQDKSSESYPYSRRVSTAPPRTPGRKPRHPRRAPPGTAPPP------- 198
Query: 276 INGQHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDSSD 315
HT+P L S AP+ +V + P SSD
Sbjct: 197 ---PHTSPAALYISSAAPAQWR--------RVDAPPSSSD 111
>TC8136 similar to GB|AAB60729.1|2160166|F21M12 F21M12.13 {Arabidopsis
thaliana;}, partial (70%)
Length = 1659
Score = 30.0 bits (66), Expect = 0.58
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 13/103 (12%)
Frame = +2
Query: 241 PITTVGNQTLTDAPASPKITPSFIQSPPSDPTT-------------NHINGQHTTPCQLT 287
P T + +LT P+ PK QSPP+ P+T + +TP
Sbjct: 251 PPRTTQHDSLTSPPSPPKRPSPPHQSPPARPST*ATTLSVSRSEPPASSSSWSSTPAPTR 430
Query: 288 ESHRAPSHTEEHKPNLEVKVSSGPDSSDRILDSHRSKRITTKP 330
S RAP+ P L P ++ SH + R P
Sbjct: 431 LSSRAPAAPAAPPPPLHFPPKHLPHTARSTAPSHCAARSAASP 559
>BI417928
Length = 509
Score = 30.0 bits (66), Expect = 0.58
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Frame = +2
Query: 220 LDASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHING- 278
L +S P T P P TT T+ ASP TP SPPS P+ G
Sbjct: 251 LSSSSPWPPFCPTSPPPKPTTPPTTAKATTV----ASPLPTPPTTPSPPSAPSPPSTYGP 418
Query: 279 QHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGP 311
LT + SHT+ P+ SS P
Sbjct: 419 SKPLSVTLTGAPSTASHTQFSPPS---STSSNP 508
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 30.0 bits (66), Expect = 0.58
Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 7/158 (4%)
Frame = +1
Query: 166 AEGRQEPETGKEGQEKEKVISQMREKEPGIEKVNYSST----NVSSAVFKQGQMTLVPLD 221
A PE+ + + P K ++SST SS K T +
Sbjct: 208 ATNSSPPESRSTTPPSSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPKSKNATSLTAP 387
Query: 222 ASQPQDACSTTQ---DKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHING 278
+ P + + T K PP P T ++ + + P TPS + S P PTT+ I
Sbjct: 388 SCPPPASPAATAPAPSKTPPNPP--TNSSKPSSCKSSLPNTTPSSLSSAPPSPTTSPI-- 555
Query: 279 QHTTPCQLTESHRAPSHTEEHKPNLEVKVSSGPDSSDR 316
+TP + S P SS P ++ R
Sbjct: 556 --STPSSPENQEKPASTPPSAPPRSTSSSSSSPINTPR 663
>TC12019
Length = 510
Score = 29.6 bits (65), Expect = 0.76
Identities = 26/82 (31%), Positives = 34/82 (40%), Gaps = 8/82 (9%)
Frame = +1
Query: 228 ACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPSFIQSPPSDPTTNHINGQHTTPCQ-- 285
+CST P L+P+ + + A+P P +SPPSD N Q PCQ
Sbjct: 199 SCSTLSSA-PSLSPLVPLVKKEGNSTRAAPLPPPC*TESPPSDSVAVKSNQQQ--PCQNP 369
Query: 286 ----LTESHRA--PSHTEEHKP 301
LT S A P T +P
Sbjct: 370 RGALLTRSRTATRPGSTGSPRP 435
>TC18949 similar to UP|Q8S8Z5 (Q8S8Z5) Syringolide-induced protein B13-1-1
(Fragment), partial (35%)
Length = 596
Score = 29.6 bits (65), Expect = 0.76
Identities = 10/19 (52%), Positives = 13/19 (67%)
Frame = +2
Query: 282 TPCQLTESHRAPSHTEEHK 300
TPC L +S+ P HT+ HK
Sbjct: 344 TPCNLRQSYSTPQHTKHHK 400
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 29.3 bits (64), Expect = 0.99
Identities = 13/41 (31%), Positives = 22/41 (52%)
Frame = +2
Query: 254 PASPKITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPS 294
P +P +P+F S PS P + + T+P + T ++PS
Sbjct: 218 PQTPTTSPAFSPSTPSSPPSTTTSPSPTSPPRSTNGPQSPS 340
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,206,356
Number of Sequences: 28460
Number of extensions: 92509
Number of successful extensions: 562
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of query: 339
length of database: 4,897,600
effective HSP length: 91
effective length of query: 248
effective length of database: 2,307,740
effective search space: 572319520
effective search space used: 572319520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC136141.8