BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135461.10 + phase: 0
(425 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG662073 176 4e-51
BP033343 70 7e-13
TC14718 similar to UP|NCPR_CATRO (Q05001) NADPH--cytochrome P450... 30 0.76
AI967800 27 6.4
TC17600 similar to PIR|A47298|A47298 NADPH-ferrihemoprotein redu... 27 6.4
CN825821 27 6.4
TC18193 homologue to UP|Q8H251 (Q8H251) Amt2-like protein, parti... 27 8.4
TC12698 UP|Q84PE1 (Q84PE1) Multifunctional beta-amyrin synthase,... 27 8.4
TC17290 similar to UP|Q8H4Y5 (Q8H4Y5) OJ1136_A10.4 protein, part... 27 8.4
AU252178 27 8.4
>BG662073
Length = 501
Score = 176 bits (445), Expect(2) = 4e-51
Identities = 74/124 (59%), Positives = 96/124 (76%)
Frame = +1
Query: 168 HGTNLPGGGYNDGAFWIDLPTDEDARSNLKKGNIESAELYVHVKPALGGAFTDIAMWVFC 227
+GTNLP + DGA+W+DLP D D + +KKG+++S E YVHVKP LGG FTD+AMWVF
Sbjct: 46 NGTNLPQDPHTDGAYWLDLPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFY 225
Query: 228 PFNGPATLKVSLMNIEMNKIGEHVGDWEHFTLRVSNFTGELWSVFFSEHSGGKWVNAFDL 287
PFNGPA KV N+++ +IGEHVGDWEH TLR+SNF G+LW V+F++HS G WV++ +
Sbjct: 226 PFNGPARAKVEFFNVKLGRIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQI 405
Query: 288 EFIK 291
EF K
Sbjct: 406 EFQK 417
Score = 42.7 bits (99), Expect(2) = 4e-51
Identities = 17/23 (73%), Positives = 19/23 (81%)
Frame = +2
Query: 293 NKPIVYSSRHGHASYPHAGTYLQ 315
N+P+VYSS HGHASYPH G LQ
Sbjct: 431 NRPVVYSSLHGHASYPHPGLILQ 499
>BP033343
Length = 481
Score = 70.1 bits (170), Expect = 7e-13
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = -2
Query: 377 EIEKIIDMLPIFVRFSVENLFELFPTELSGEEGPTGPKEKDNWLGDE 423
E++KII+ LP ++ S++NLF FP EL GEEGPTGPKEK+NW+GDE
Sbjct: 480 ELDKIINALPKMLQHSMKNLFNQFPVELYGEEGPTGPKEKNNWIGDE 340
>TC14718 similar to UP|NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase
(CPR) (P450R) , partial (36%)
Length = 1163
Score = 30.0 bits (66), Expect = 0.76
Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 1/55 (1%)
Frame = +1
Query: 117 LNQIHALIEHYGPTVYFHPDEKYMPSSVSW-FFKNGAILYTAGNAKGKAIDYHGT 170
L+++ GPT + + +S W GA +Y G+AKG A D H T
Sbjct: 511 LSELIVAFSREGPTKEYVQHKMMEKASDIWNMISQGAYIYVCGDAKGMARDVHRT 675
>AI967800
Length = 470
Score = 26.9 bits (58), Expect = 6.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 231 GPATLKVSLMNIEMNK--IGEHVGDWEHFTLRVSNFTGELWS 270
GP + ++NI K GE W+ F LRV +L+S
Sbjct: 249 GPVRIPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYS 374
>TC17600 similar to PIR|A47298|A47298 NADPH-ferrihemoprotein reductase -
mung bean {Vigna radiata;} , partial (19%)
Length = 717
Score = 26.9 bits (58), Expect = 6.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 151 GAILYTAGNAKGKAIDYHGT 170
GA LY G+AKG A D H T
Sbjct: 237 GAYLYVCGDAKGMARDVHHT 296
>CN825821
Length = 601
Score = 26.9 bits (58), Expect = 6.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 231 GPATLKVSLMNIEMNK--IGEHVGDWEHFTLRVSNFTGELWS 270
GP + ++NI K GE W+ F LRV +L+S
Sbjct: 214 GPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYS 339
>TC18193 homologue to UP|Q8H251 (Q8H251) Amt2-like protein, partial (57%)
Length = 1024
Score = 26.6 bits (57), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 119 QIHALIEHYGPTVYFHP 135
++H L++HY P + FHP
Sbjct: 902 RLHPLLQHYRPMLEFHP 852
>TC12698 UP|Q84PE1 (Q84PE1) Multifunctional beta-amyrin synthase, complete
Length = 2442
Score = 26.6 bits (57), Expect = 8.4
Identities = 16/52 (30%), Positives = 30/52 (56%)
Frame = +3
Query: 17 KGYKAVGIVVTTNPDEPKAEEVRCVRTDLTEVCETSDLLLTIKSKKNSFQVW 68
+G+K ++++ P E E++ R + +T +LLL+++SKK F VW
Sbjct: 1476 EGFKCC-LLLSMLPPEIVGEKIEPER-----LFDTVNLLLSLQSKKGGFAVW 1613
>TC17290 similar to UP|Q8H4Y5 (Q8H4Y5) OJ1136_A10.4 protein, partial (14%)
Length = 540
Score = 26.6 bits (57), Expect = 8.4
Identities = 23/80 (28%), Positives = 38/80 (46%), Gaps = 6/80 (7%)
Frame = -1
Query: 283 NAFDLEFI-KENKPIVYSSRHGHASYPHAGTYLQGSSKLGIGVRNDAAKSNFILDSSF-- 339
N +D++ I K +K I S+ HG S+P+ + S +G+ +D + F SS
Sbjct: 447 NPYDVKIIQKYHKSIP*STLHGSNSHPNKSSSSSSSPSALLGLLSDFPLNVFPFSSSLSE 268
Query: 340 --RYKIVAAEYL-GDGVITE 356
R ++ EY D +TE
Sbjct: 267 EARSPVLEVEYAQEDPTLTE 208
>AU252178
Length = 350
Score = 26.6 bits (57), Expect = 8.4
Identities = 15/49 (30%), Positives = 26/49 (52%)
Frame = +2
Query: 371 VYDSRSEIEKIIDMLPIFVRFSVENLFELFPTELSGEEGPTGPKEKDNW 419
V + + +EKI + V ++VE L E ++SGEEG + ++ W
Sbjct: 77 VASAEAVVEKIKAAVQKLVPYNVEELSE----DISGEEGSLESENEEGW 211
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.138 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,497,117
Number of Sequences: 28460
Number of extensions: 120261
Number of successful extensions: 560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of query: 425
length of database: 4,897,600
effective HSP length: 93
effective length of query: 332
effective length of database: 2,250,820
effective search space: 747272240
effective search space used: 747272240
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC135461.10