BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135320.2 + phase: 0
(1662 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP063872 219 3e-57
BU494147 112 6e-25
CB828604 107 2e-23
BI420301 107 2e-23
AV772864 102 5e-22
BP043204 102 6e-22
AV778692 90 3e-18
TC11116 similar to UP|Q9XEY9 (Q9XEY9) NT3, partial (6%) 69 8e-12
BF177633 68 1e-11
TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, p... 62 7e-10
TC10042 53 3e-07
CB827128 37 0.019
CB826758 36 0.057
BP069078 33 0.37
BP054632 33 0.48
TC12543 similar to UP|Q9AT29 (Q9AT29) bZIP transcription factor,... 32 0.82
TC17840 similar to UP|LON1_SPIOL (O04979) Lon protease homolog 1... 32 1.1
TC18830 weakly similar to UP|O40637 (O40637) Protease, partial (5%) 31 1.4
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 31 1.4
TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, parti... 31 1.4
>BP063872
Length = 445
Score = 219 bits (558), Expect = 3e-57
Identities = 110/140 (78%), Positives = 124/140 (88%)
Frame = +3
Query: 725 LEEKYADVEKDKESAVNQVEELFASILVQKENHSNHKHSSEARLANLENIVRVLQEEQRL 784
LEEKYADV KDKES NQVEEL ASI VQKE H+NHKH SEARLANLEN+V VLQEEQRL
Sbjct: 24 LEEKYADVGKDKESTDNQVEELRASIFVQKEKHANHKHLSEARLANLENLVHVLQEEQRL 203
Query: 785 GKVEFEQELDRVVNAQIEMFILQNCIEELELKNFVLLTECEKLVEASKFSDKVISELESE 844
GK+EF +ELD+ VNAQ+EMFI+QNC+EELE N LLT+CEK +EAS+FSDKVISELE+E
Sbjct: 204 GKIEFGEELDKAVNAQMEMFIMQNCVEELEQMNLALLTKCEKHIEASRFSDKVISELETE 383
Query: 845 NLMQLIEEEFLLHRIRKFKM 864
NLMQL+ EEFLLH+IRKFKM
Sbjct: 384 NLMQLMAEEFLLHQIRKFKM 443
>BU494147
Length = 471
Score = 112 bits (279), Expect = 6e-25
Identities = 65/154 (42%), Positives = 95/154 (61%), Gaps = 11/154 (7%)
Frame = +2
Query: 1483 DSGRYLNYSSELDIEKELGVDKLELSKSVKEKTED-DKRRILERLSSDGQKLAILKMALQ 1541
+S R + S+E +EKEL VDKLE+S+ + + E+ +K +I +RL SD QKL L++ +Q
Sbjct: 2 NSARGKHPSAESLVEKELSVDKLEISRRLTQPREEGNKSKIFKRLDSDAQKLTNLQITIQ 181
Query: 1542 DLKKKTETKKKSKQGNDIEYETVKRHIEEVEEAVMQQVSINDQMAKNVEEGASSLDR--- 1598
DL KK E +KS +G +EY+TVK +E +E + N ++ KNVEEGA S D
Sbjct: 182 DLMKKVEFSEKSTKGKGVEYDTVKGQLEAAQETTTKLFDANRELMKNVEEGALSSDENGS 361
Query: 1599 -------EIPRRGSEQIGKLQFEVQNIQYILLKL 1625
E R G+E+IG+LQF +Q++LLKL
Sbjct: 362 ISRRRASEQARTGAEKIGQLQFGGARLQFLLLKL 463
Score = 31.2 bits (69), Expect = 1.4
Identities = 27/106 (25%), Positives = 46/106 (42%)
Frame = +2
Query: 47 IEEEADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHAMGELRHAHKTMPEAFPN 106
I + DS A++ +LMK VE ++ + YD G+L A +T + F
Sbjct: 122 IFKRLDSDAQKLTNLQITIQDLMKKVEFSEKSTKGKGVEYDTVKGQLEAAQETTTKLFDA 301
Query: 107 SAYYILNDDSPCGSLGPDAESHTSARPTHRSKKNERSSEESNGEVQ 152
+ + N + G+L D S R R+ + R+ E G++Q
Sbjct: 302 NRELMKNVEE--GALSSDENGSISRR---RASEQARTGAEKIGQLQ 424
>CB828604
Length = 540
Score = 107 bits (267), Expect = 2e-23
Identities = 49/86 (56%), Positives = 67/86 (76%), Gaps = 1/86 (1%)
Frame = +2
Query: 15 WWW-DSHNSPKNSKWLLENLTDIDTKVKSMIKLIEEEADSFARRAEMYYKKRPELMKLVE 73
WW+ DSH+S K S WL L++++ K K+++KLIEE+ADSFA+RAEMYYKKRPEL+ +VE
Sbjct: 197 WWFLDSHSSTKRSPWLQSTLSELNEKTKAILKLIEEDADSFAQRAEMYYKKRPELVSMVE 376
Query: 74 EFYRAYRALAERYDHAMGELRHAHKT 99
+FYR +R+LAERYD + +H T
Sbjct: 377 DFYRTHRSLAERYDQVKPDTGISHLT 454
>BI420301
Length = 410
Score = 107 bits (266), Expect = 2e-23
Identities = 60/134 (44%), Positives = 84/134 (61%), Gaps = 6/134 (4%)
Frame = +3
Query: 1367 MEELKRRVKQKSLTTESTPYSSLEIATYPKVENRKKEIELVEENVFDRNSWRKKPKIRLL 1426
+E L + ++L + T S+LE P++++RK E E D N+WR KP+ R+L
Sbjct: 12 LENLTANAETRALA-QVTEDSNLEATPCPEIDSRKVAKEPKESGTRDLNAWRIKPESRVL 188
Query: 1427 MKDIPLDRNVDDQNSKYLKREHRRTNDHVLELCENNEHEPLSA-----PTVDHAMIC-HR 1480
MKDI LD N DD +S Y KREH +TNDHVLELC++++HE A P + AM C H+
Sbjct: 189 MKDIQLDHNSDDLDSHYCKREHSKTNDHVLELCDSDDHEISEADKRDNPPTEDAMTCHHQ 368
Query: 1481 SDDSGRYLNYSSEL 1494
S++S R +YSSEL
Sbjct: 369 SENSERRQSYSSEL 410
>AV772864
Length = 492
Score = 102 bits (254), Expect = 5e-22
Identities = 46/85 (54%), Positives = 65/85 (76%)
Frame = +2
Query: 15 WWWDSHNSPKNSKWLLENLTDIDTKVKSMIKLIEEEADSFARRAEMYYKKRPELMKLVEE 74
W+ DSH+S K S WL L++++ K K+++KLIEE+AD+FA+RAEMYYKKRPEL+ +VE+
Sbjct: 224 WFLDSHSSTKRSPWLQSTLSELNEKTKAILKLIEEDADAFAQRAEMYYKKRPELVSMVED 403
Query: 75 FYRAYRALAERYDHAMGELRHAHKT 99
YR +R+LAERYD + +H T
Sbjct: 404 RYRTHRSLAERYDQVKPDTGISHLT 478
>BP043204
Length = 563
Score = 102 bits (253), Expect = 6e-22
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +1
Query: 1 MATLSESESRRLYSWWWDSHNSPKNSKWLLENLTDIDTKVKSMIKLIEEEADSFARRA 58
MA+L S SRR+YSWWWDSH SPKNSKWL ENLTD+D KVK MIKLIEE+ADSFARRA
Sbjct: 388 MASLPHSGSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRA 561
>AV778692
Length = 524
Score = 89.7 bits (221), Expect = 3e-18
Identities = 40/59 (67%), Positives = 51/59 (85%)
Frame = +2
Query: 35 DIDTKVKSMIKLIEEEADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHAMGEL 93
++D V+ M+KLIE++ DSFA++AEMYY+KRPEL+ LVEEFYR YR LAERY+HA GEL
Sbjct: 227 EMDRNVRQMLKLIEDDGDSFAQKAEMYYQKRPELISLVEEFYRGYRFLAERYEHATGEL 403
>TC11116 similar to UP|Q9XEY9 (Q9XEY9) NT3, partial (6%)
Length = 540
Score = 68.6 bits (166), Expect = 8e-12
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 14/78 (17%)
Frame = +3
Query: 1599 EIPRRGSEQIGKLQFEVQNIQYILLKLAEENNNKVKNRISRKTGILL------------- 1645
E RR SEQIG+LQFEVQNIQYILLKLA+E N++ ++ +TGI L
Sbjct: 42 EQARRDSEQIGRLQFEVQNIQYILLKLADEKNHQGES----QTGIFLRDFIPIGRKNSRR 209
Query: 1646 RRKLRVCGCS-GPSTNED 1662
RRK+ VCGCS PST+ED
Sbjct: 210 RRKVCVCGCSRKPSTHED 263
>BF177633
Length = 180
Score = 67.8 bits (164), Expect = 1e-11
Identities = 33/54 (61%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Frame = +3
Query: 1476 MICHRSDDSGRYLNYSSELDIEKELGVDKLELSKSVKEKTED--DKRRILERLS 1527
++ H+SD+SG+ LN SSELD EKELGVDKL+LS+S+K++T D +R+ILERL+
Sbjct: 9 IMAHQSDNSGKILNTSSELDAEKELGVDKLQLSRSIKDRTPDGSQRRKILERLT 170
>TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, partial
(34%)
Length = 1827
Score = 62.0 bits (149), Expect = 7e-10
Identities = 104/534 (19%), Positives = 223/534 (41%), Gaps = 17/534 (3%)
Frame = +1
Query: 138 KKNERSSEESNGEVQTLREALAKMQSDKDALFLQYQESLENLSKMETDLNKAQNNARGLD 197
K+ ++ +++S ++ L L + Q L + + L K+ + N+
Sbjct: 133 KQAQQDAQDSKEQLLALSAKLEESQKQYLELCTTEEARITELQKITEECNRT-------- 288
Query: 198 DRASEAEIQVEILKESLMQLKADKDAGEVLYNQCLETIARLESMLS---QKDNIEAKNLK 254
R SE E + L L + + ++L Q LE +A ES+ + + ++E NLK
Sbjct: 289 -RQSELEASQKHLSVDSAALASAANEIQLLKVQ-LELVANCESVQTHHAESADVELLNLK 462
Query: 255 QELTRVVVQKDTVLLQYKQCLEKIPMLENKIALAEENSRMLNDQIERTELEVETLRKNLA 314
Q L+ + + + Q + E + ++ +L Q+E + VE LR ++A
Sbjct: 463 QNLSETLSLVENMKNQLRNFKEFEAQAQGLVS-----ETLL--QLETAKRTVEILRGDVA 621
Query: 315 EMNEERDSLSVLYHHCLEKISKMENEILHVQENAEQLKNKIEKEAEKLEISEKHRGMLEK 374
+ + S+++ K++ +E +L + N + + N G L
Sbjct: 622 KSVDGYKSIALELDQSRAKVNTLE--VLVEKLNPDFINNNCNNS-----------GDLVD 762
Query: 375 SNQNLQLEAENLVQRIASKDHELLEKHTEIERLQTLMHGEH-SNFIQIESALQALQKLYS 433
+++ +EAE I S ++ + +E + E + +QI +A + ++++ S
Sbjct: 763 GHRSDHVEAE-----ICSLKSDVGRLRSAVETAEIKYQEEQIRSTVQIRNAYELMEQIKS 927
Query: 434 QSQKEQRNLALELKYGLLLLKDLELSKQDFKEEMQGIVEENKTLH---------ELNFSS 484
+S +++ ELK +++L+ + D + E+QGI+EEN+ L+ + +
Sbjct: 928 ESGQKECEFEAELKRKKADIEELKANLMDKETELQGIMEENENLNSKLQVRTSCQSDHEL 1107
Query: 485 TRSLKKQQMEISKLKEIKEKLEREFHTSTEESNVLQRETHQIKDDIQHLNERYQAMLEQL 544
+K+ + ++ LK E + +EE+ +L+ E ++ + + A E L
Sbjct: 1108RNEIKRLEHCVAALKADMMDKETTLQSISEENEMLKLE----RNKSEEIEAAKAAEHEAL 1275
Query: 545 QSLGLNPNSFAASVRDLQNENFMLKETCKKEHSEKEALREKSKDMNEVLMENACMEFSLL 604
LG+ +S R L E + +SE EA + K ++ + A ++L
Sbjct: 1276MKLGIAMQEVESSSRKAARVTEQL-EAAQASNSEMEAELRRMKVQSDQWRKAAEAAAAML 1452
Query: 605 --GLNDELDGLRGTVKEIQQFCQVLQEE--KSILADEKSTLLSQLQIITESMQK 654
G N ++ ++ + C EE L + +L ++ ++ + QK
Sbjct: 1453SAGNNGKITERTMSLDDNSYKCSPFAEENDNDYLRKKNGNMLKKIGVLWKKPQK 1614
Score = 53.5 bits (127), Expect = 3e-07
Identities = 99/434 (22%), Positives = 185/434 (41%), Gaps = 22/434 (5%)
Frame = +1
Query: 627 LQEEKSILADEKSTLLSQLQIITESMQKILENNTVLEKSLSDAKIEFEGLRIKSGDLEDC 686
L+ + S L D+ + QL I+TES +K ++ DA+ E L S LE+
Sbjct: 55 LESQISQLQDDLKKVRDQL-ILTESCKK---------QAQQDAQDSKEQLLALSAKLEES 204
Query: 687 CKLLNDEKNNLQNERSMLISQLEIVEEKLSNLEKKVTNLEEKYADVEKDK-ESAVNQVEE 745
K + L I++L+ + E+ + + +K+ V+ SA N+++
Sbjct: 205 QK----QYLELCTTEEARITELQKITEECNRTRQSELEASQKHLSVDSAALASAANEIQL 372
Query: 746 LFASILVQKENHSNHKHSSEARLANLENIVRVLQE-----EQRLGKVEFEQELDRVVNAQ 800
L + + S H +E+ L N+ + L E E ++ +E +
Sbjct: 373 LKVQLELVANCESVQTHHAESADVELLNLKQNLSETLSLVENMKNQLRNFKEFEAQAQGL 552
Query: 801 IEMFILQNCIEELELKNFVLLTECEKLVEASKFSDKVISELESE-NLMQLIEEEFLLHRI 859
+ +LQ +E + +L + K V+ K + + ++ N ++++ E
Sbjct: 553 VSETLLQ--LETAKRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVLVE------- 705
Query: 860 RKFKMD-IHKVCGVLQIDSDGGGDNEIKKEEIPISRILDKIES-LESSLVKSQEENQQLL 917
K D I+ C DG + ++ E + + ++ S +E++ +K QEE +
Sbjct: 706 -KLNPDFINNNCNNSGDLVDGHRSDHVEAEICSLKSDVGRLRSAVETAEIKYQEEQIRST 882
Query: 918 VENSVLLGSLQQHQSE-GEK-------LKLEKKTVEQEFENMREQNVILQ--KDKVELLE 967
V+ ++Q +SE G+K LK +K +E+ N+ ++ LQ ++ E L
Sbjct: 883 VQIRNAYELMEQIKSESGQKECEFEAELKRKKADIEELKANLMDKETELQGIMEENENLN 1062
Query: 968 ENRQLRIEVVNGVEKEN---RSKSTLAALQAEMIELRQTNQVFQEENGKMLDEKNSLCRN 1024
Q+R + E N R + +AAL+A+M++ T Q EEN E L RN
Sbjct: 1063 SKLQVRTSCQSDHELRNEIKRLEHCVAALKADMMDKETTLQSISEEN-----EMLKLERN 1227
Query: 1025 VSDLKDAKSSAEDE 1038
S+ +A +AE E
Sbjct: 1228 KSEEIEAAKAAEHE 1269
>TC10042
Length = 575
Score = 53.1 bits (126), Expect = 3e-07
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = -2
Query: 48 EEEADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHAMGELRHAHKTMPEAFPNS 107
EE D+FA RAE YY+KRP+L+ L+++ Y Y L++RY + + +H + +
Sbjct: 571 EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLAKHKHFRHSRHSSQVEG 392
Query: 108 AYYILNDDSPCGSLGPDAESHTS 130
+ + S + D ES S
Sbjct: 391 GFSDQEEVSGVSQVDSDIESSIS 323
>CB827128
Length = 556
Score = 37.4 bits (85), Expect = 0.019
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Frame = +1
Query: 556 ASVRDLQNENFMLKETCKKEHSEKEALREKSKDMNEVLMENACMEFSLLGLNDELDGLRG 615
A + DLQ+ + ET + + E + E L +A E LN++L+ L G
Sbjct: 82 AELNDLQSRS---SETLSANEAR---ILEVESQLQEALQRHAEKEAEAKDLNEKLNALEG 243
Query: 616 TVKEIQQFCQVLQEEKSILADEKSTLLSQLQIITESMQKILENNTVLEKSLSDAKIEFEG 675
+K L EE++ + ++E+ + LE + + K L E +
Sbjct: 244 QIK--------LHEEQA----------REAVAVSETHKSGLEESLLKLKHLETVVDELQN 369
Query: 676 LRIKSGDLEDCCKLLNDEKNN--LQNERSMLISQLEIVEEKLSNLEKKVTNLEEKYADVE 733
KLL+ EK L E + L ++ I E KLS+L+ K++ + +
Sbjct: 370 ------------KLLHHEKETAGLNEENTKLNQEIAIYESKLSDLQSKLSAALVEKDETV 513
Query: 734 KDKESAVNQVEEL 746
K+ ++ + +EEL
Sbjct: 514 KEILTSKDAIEEL 552
Score = 33.1 bits (74), Expect = 0.37
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Frame = +1
Query: 1052 LNLVYEIFFTENMVEKRALCEHLGNLSHLNNDLNQEFGVLRKN-FEVKEAENVYLNESIE 1110
LNLV +E + L H ++ LN+ ++ L N + E E+ L E+++
Sbjct: 16 LNLVV----SEKEATAQELVSHKNTMAELNDLQSRSSETLSANEARILEVES-QLQEALQ 180
Query: 1111 R----------MDKELLEMDKRLKAAETSNAEFSRHIEELKMEQEESTKIKENLDRQILE 1160
R ++++L ++ ++K E E E K EES ++L+ + E
Sbjct: 181 RHAEKEAEAKDLNEKLNALEGQIKLHEEQAREAVAVSETHKSGLEESLLKLKHLETVVDE 360
Query: 1161 QSENCMNHKKEIEHLNEANETLQFEM 1186
++H+KE LNE N L E+
Sbjct: 361 LQNKLLHHEKETAGLNEENTKLNQEI 438
Score = 28.9 bits (63), Expect = 6.9
Identities = 24/113 (21%), Positives = 54/113 (47%)
Frame = +1
Query: 887 KEEIPISRILDKIESLESSLVKSQEENQQLLVENSVLLGSLQQHQSEGEKLKLEKKTVEQ 946
++E + +K+ +LE + +E+ ++ + + + H+S E+ L+ K +E
Sbjct: 190 EKEAEAKDLNEKLNALEGQIKLHEEQAREAVAVS-------ETHKSGLEESLLKLKHLET 348
Query: 947 EFENMREQNVILQKDKVELLEENRQLRIEVVNGVEKENRSKSTLAALQAEMIE 999
+ ++ + + +K+ L EEN +L E+ K + +S L+A E E
Sbjct: 349 VVDELQNKLLHHEKETAGLNEENTKLNQEIAIYESKLSDLQSKLSAALVEKDE 507
>CB826758
Length = 537
Score = 35.8 bits (81), Expect = 0.057
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Frame = +2
Query: 1111 RMDKELLEMDKRLKAAETSNAE----FSRHIEELKMEQEESTKIKENLDRQILEQSENCM 1166
R +K+ +E +R KAAE+ AE EEL+ E+EE +K D+ + E+
Sbjct: 92 RAEKDAIEAIRRAKAAESLYAEELNLRKMAEEELETEKEELENLKSQADK-VKEELRLVQ 268
Query: 1167 NHKKEIEHLNEANETLQFEMK-------TLLHEVEQHRVREEALNLELLNKENEFKLWEN 1219
+ K +E ++E + E++ LL + R E LL + E + +
Sbjct: 269 DQKSSLESQLASSELMVKELEQKIISAVDLLQNYKNEREELEVQRDSLLREAEELRKKQG 448
Query: 1220 EAAAFYHDLQMSSICLALLE 1239
EA++ + S + +E
Sbjct: 449 EASSSHVSQLFSEFSFSEIE 508
Score = 29.6 bits (65), Expect = 4.1
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +2
Query: 569 KETCKKEHSEKEALR--EKSKDMNEVLMENACMEFSLLGL-NDELDGLRGTVKEIQQFCQ 625
+ET ++ +EK+A+ ++K + E E +L + +EL+ + ++ ++
Sbjct: 71 QETFRRGRAEKDAIEAIRRAKAAESLYAE----ELNLRKMAEEELETEKEELENLKSQAD 238
Query: 626 VLQEEKSILADEKSTLLSQLQIITESMQKILENNTVLEKS-LSDAKIEFEGLRIKSGDL 683
++EE ++ D+KS+L SQL +E M K LE + L + K E E L ++ L
Sbjct: 239 KVKEELRLVQDQKSSLESQL-ASSELMVKELEQKIISAVDLLQNYKNEREELEVQRDSL 412
>BP069078
Length = 452
Score = 33.1 bits (74), Expect = 0.37
Identities = 20/63 (31%), Positives = 35/63 (54%)
Frame = -2
Query: 1113 DKELLEMDKRLKAAETSNAEFSRHIEELKMEQEESTKIKENLDRQILEQSENCMNHKKEI 1172
+K+L ++ K+L E N E I+EL+ E++ E +D +L+ + C NH+ E+
Sbjct: 448 EKDLDDLRKKLDTLELENIEKDLKIKELEKEKKNLVTSLE-IDHAVLKVT--CENHEAEV 278
Query: 1173 EHL 1175
E L
Sbjct: 277 EEL 269
Score = 28.5 bits (62), Expect = 9.0
Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 6/76 (7%)
Frame = -2
Query: 1091 LRKNFEVKEAENVYLNESIERMDKE------LLEMDKRLKAAETSNAEFSRHIEELKMEQ 1144
LRK + E EN+ + I+ ++KE LE+D + N E +EELK
Sbjct: 430 LRKKLDTLELENIEKDLKIKELEKEKKNLVTSLEIDHAVLKVTCENHE--AEVEELK--S 263
Query: 1145 EESTKIKENLDRQILE 1160
E + K D+ I++
Sbjct: 262 EVAVKYASGFDKAIMQ 215
>BP054632
Length = 514
Score = 32.7 bits (73), Expect = 0.48
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 1112 MDKELLEMDKRLKAAETSNAEFSRHIEELKMEQEESTKIKENLDRQILEQSENCMNHKKE 1171
+DK E+D A SN + + +++ E + + L+ Q+ E + E
Sbjct: 207 LDKAAAELDSSASATTQSNQDAYKKPNYVQISVESYSHLT-GLEDQVKTYEEKVQTLEDE 383
Query: 1172 IEHLNEANETLQFEMKTLLHEVEQH-RVREEALN 1204
I LNE E+ T V+QH +V EEA++
Sbjct: 384 INELNEKLSAANSEINTKEGLVKQHAKVAEEAVS 485
>TC12543 similar to UP|Q9AT29 (Q9AT29) bZIP transcription factor, partial
(52%)
Length = 510
Score = 32.0 bits (71), Expect = 0.82
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = +3
Query: 465 EEMQGIVEENKTLHELNFSSTRSLKKQQMEISKLKEIKEKLEREFHTSTEESNVLQRETH 524
E+ QG++ E K H S+ S ++ +M + +R + L+ E H
Sbjct: 210 EQQQGLINERK--HRRMISNRESARRSRM----------RKQRHLDELWSQVVWLRNENH 353
Query: 525 QIKDDIQHLNERYQAMLEQLQSLGLNPNSFAASVRDLQ 562
Q+ D + H +E + ++++ L +RD+Q
Sbjct: 354 QLLDKLSHASESHDQVVQENAQLKEEAIELRQMLRDMQ 467
>TC17840 similar to UP|LON1_SPIOL (O04979) Lon protease homolog 1,
mitochondrial precursor , partial (22%)
Length = 816
Score = 31.6 bits (70), Expect = 1.1
Identities = 17/62 (27%), Positives = 36/62 (57%), Gaps = 2/62 (3%)
Frame = +3
Query: 838 ISELESENLMQLIEEE--FLLHRIRKFKMDIHKVCGVLQIDSDGGGDNEIKKEEIPISRI 895
IS LE++ M+ +E++ F+L R+FK ++ VL++ GG ++ + +P+ ++
Sbjct: 627 ISSLETKTEMEQVEQDPDFILLS-RRFKATAMELISVLELKQKTGGRTKLLLDNVPVHKL 803
Query: 896 LD 897
D
Sbjct: 804 AD 809
>TC18830 weakly similar to UP|O40637 (O40637) Protease, partial (5%)
Length = 850
Score = 31.2 bits (69), Expect = 1.4
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 23/127 (18%)
Frame = +2
Query: 119 GSLGPDAESHTSARPTHRSKKNERSSEESNGEVQTLR------------EALAKMQSDKD 166
G++G D H S H + + + S+ E+Q L + L M + KD
Sbjct: 350 GTIGVDIGLHNSCVSAHSGAEEIKQTASSSLELQVLNLTQNISSLENKLKELQGMVALKD 529
Query: 167 ALFLQYQ-----------ESLENLSKMETDLNKAQNNARGLDDRASEAEIQVEILKESLM 215
+ ++ + ES + E + ++ GL + EAEI+ + + +
Sbjct: 530 SRIVELETALSSGKSPKEESASTIGLSEEICKEVESEVEGLFRQKIEAEIEYLAISKVMQ 709
Query: 216 QLKADKD 222
LKA KD
Sbjct: 710 NLKAGKD 730
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 31.2 bits (69), Expect = 1.4
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Frame = +1
Query: 1538 MALQDLKKKTETKKKSKQGNDIEY------ETVKRHIEEVEEAVMQQVSINDQMAKNVEE 1591
M + + KK + KS Q ++ + E + EEVEE V ++V ++ + EE
Sbjct: 88 MVNESITKKRKLVPKSSQSAELPFKLQNKLEAEVQEYEEVEEEVEEEVEEEEEEEEEEEE 267
Query: 1592 G---------ASSLDREIPRRGSEQIGKLQFEVQNIQYI-LLKLAEENNNKVKNRISR 1639
G ++ E E I KL + Q I LL A N+ V +RI +
Sbjct: 268 GEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQIISLLADAASNHRDVADRIRK 441
>TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, partial (3%)
Length = 676
Score = 31.2 bits (69), Expect = 1.4
Identities = 23/77 (29%), Positives = 36/77 (45%)
Frame = +2
Query: 290 ENSRMLNDQIERTELEVETLRKNLAEMNEERDSLSVLYHHCLEKISKMENEILHVQENAE 349
+N + +Q++ +E VE +K NE+ SLS L + E+ K E E+ AE
Sbjct: 185 KNEEVKVEQVQESEANVE--KKTEETPNEDNKSLSTLLNENEEEAKKPEEEV-----QAE 343
Query: 350 QLKNKIEKEAEKLEISE 366
+ K E K+E E
Sbjct: 344 PKEEKATTEEVKVETKE 394
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.128 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,098,975
Number of Sequences: 28460
Number of extensions: 231534
Number of successful extensions: 1233
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of query: 1662
length of database: 4,897,600
effective HSP length: 103
effective length of query: 1559
effective length of database: 1,966,220
effective search space: 3065336980
effective search space used: 3065336980
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC135320.2